data_6ALS # _entry.id 6ALS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6ALS pdb_00006als 10.2210/pdb6als/pdb WWPDB D_1000229435 ? ? BMRB 30328 ? 10.13018/BMR30328 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-09-06 2 'Structure model' 1 1 2017-09-27 3 'Structure model' 1 2 2018-12-19 4 'Structure model' 1 3 2019-11-27 5 'Structure model' 1 4 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Author supporting evidence' 5 4 'Structure model' 'Data collection' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_audit_support 2 3 'Structure model' citation 3 3 'Structure model' citation_author 4 4 'Structure model' pdbx_audit_support 5 4 'Structure model' pdbx_nmr_software 6 4 'Structure model' pdbx_nmr_spectrometer 7 5 'Structure model' chem_comp_atom 8 5 'Structure model' chem_comp_bond 9 5 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_audit_support.funding_organization' 2 3 'Structure model' '_citation.country' 3 3 'Structure model' '_citation.journal_abbrev' 4 3 'Structure model' '_citation.journal_id_ASTM' 5 3 'Structure model' '_citation.journal_id_CSD' 6 3 'Structure model' '_citation.journal_id_ISSN' 7 3 'Structure model' '_citation.journal_volume' 8 3 'Structure model' '_citation.page_first' 9 3 'Structure model' '_citation.page_last' 10 3 'Structure model' '_citation.pdbx_database_id_DOI' 11 3 'Structure model' '_citation.pdbx_database_id_PubMed' 12 3 'Structure model' '_citation.title' 13 3 'Structure model' '_citation.year' 14 4 'Structure model' '_pdbx_audit_support.funding_organization' 15 4 'Structure model' '_pdbx_nmr_software.name' 16 4 'Structure model' '_pdbx_nmr_spectrometer.model' 17 5 'Structure model' '_database_2.pdbx_DOI' 18 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6ALS _pdbx_database_status.recvd_initial_deposition_date 2017-08-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Solution structure of a DNA dodecamer with 5-methylcytosine at the 3rd and 9th position and 8-oxoguanine at the 4th position' _pdbx_database_related.db_id 30328 _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Gruber, D.R.' 1 ? 'Shernyukov, A.V.' 2 ? 'Endutkin, A.V.' 3 ? 'Bagryanskaya, E.G.' 4 ? 'Zharkov, D.O.' 5 ? 'Smirnov, S.L.' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 46 _citation.language ? _citation.page_first 10827 _citation.page_last 10839 _citation.title 'Oxidative damage to epigenetically methylated sites affects DNA stability, dynamics and enzymatic demethylation.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gky893 _citation.pdbx_database_id_PubMed 30289469 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gruber, D.R.' 1 ? primary 'Toner, J.J.' 2 ? primary 'Miears, H.L.' 3 ? primary 'Shernyukov, A.V.' 4 ? primary 'Kiryutin, A.S.' 5 ? primary 'Lomzov, A.A.' 6 ? primary 'Endutkin, A.V.' 7 ? primary 'Grin, I.R.' 8 ? primary 'Petrova, D.V.' 9 ? primary 'Kupryushkin, M.S.' 10 ? primary 'Yurkovskaya, A.V.' 11 ? primary 'Johnson, E.C.' 12 ? primary 'Okon, M.' 13 ? primary 'Bagryanskaya, E.G.' 14 ? primary 'Zharkov, D.O.' 15 ? primary 'Smirnov, S.L.' 16 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;DNA (5'-D(*(DC5)P*GP*(DMC)P*(8OG)P*AP*AP*TP*TP*(DMC)P*GP*CP*(DG3))-3') ; _entity.formula_weight 3627.466 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DCZ)(DG)(5CM)(8OG)(DA)(DA)(DT)(DT)(5CM)(DG)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can XGCGAATTCGCG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DCZ n 1 2 DG n 1 3 5CM n 1 4 8OG n 1 5 DA n 1 6 DA n 1 7 DT n 1 8 DT n 1 9 5CM n 1 10 DG n 1 11 DC n 1 12 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 12 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 8OG 'DNA linking' n "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" "8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 'C10 H14 N5 O8 P' 363.221 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DCZ 'DNA OH 5 prime terminus' . "2'-DEOXYCYTIDINE" ? 'C9 H13 N3 O4' 227.217 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DCZ 1 1 1 DCZ DC5 A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 5CM 3 3 3 5CM DMC A . n A 1 4 8OG 4 4 4 8OG 8OG A . n A 1 5 DA 5 5 5 DA DA A . n A 1 6 DA 6 6 6 DA DA A . n A 1 7 DT 7 7 7 DT DT A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 5CM 9 9 9 5CM DMC A . n A 1 10 DG 10 10 10 DG DG A . n A 1 11 DC 11 11 11 DC DC A . n A 1 12 DG 12 12 12 DG DG3 A . n B 1 1 DCZ 1 13 13 DCZ DC5 B . n B 1 2 DG 2 14 14 DG DG B . n B 1 3 5CM 3 15 15 5CM DMC B . n B 1 4 8OG 4 16 16 8OG 8OG B . n B 1 5 DA 5 17 17 DA DA B . n B 1 6 DA 6 18 18 DA DA B . n B 1 7 DT 7 19 19 DT DT B . n B 1 8 DT 8 20 20 DT DT B . n B 1 9 5CM 9 21 21 5CM DMC B . n B 1 10 DG 10 22 22 DG DG B . n B 1 11 DC 11 23 23 DC DC B . n B 1 12 DG 12 24 24 DG DG3 B . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6ALS _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6ALS _struct.title 'Solution structure of a DNA dodecamer with 5-methylcytosine at the 3rd and 9th position and 8-oxoguanine at the 4th position' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6ALS _struct_keywords.text 'Drew-Dickerson, DNA, non-canonical, modified DNA, oxidized DNA, DNA damage, DNA adduct, lesion' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6ALS _struct_ref.pdbx_db_accession 6ALS _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6ALS A 1 ? 12 ? 6ALS 1 ? 12 ? 1 12 2 1 6ALS B 1 ? 12 ? 6ALS 13 ? 24 ? 13 24 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4910 ? 1 MORE 27 ? 1 'SSA (A^2)' 3830 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A DCZ 1 "O3'" ? ? ? 1_555 A DG 2 P ? ? A DCZ 1 A DG 2 1_555 ? ? ? ? ? ? ? 1.615 ? ? covale2 covale both ? A DG 2 "O3'" ? ? ? 1_555 A 5CM 3 P ? ? A DG 2 A 5CM 3 1_555 ? ? ? ? ? ? ? 1.616 ? ? covale3 covale both ? A 5CM 3 "O3'" ? ? ? 1_555 A 8OG 4 P ? ? A 5CM 3 A 8OG 4 1_555 ? ? ? ? ? ? ? 1.616 ? ? covale4 covale both ? A 8OG 4 "O3'" ? ? ? 1_555 A DA 5 P ? ? A 8OG 4 A DA 5 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale5 covale both ? A DT 8 "O3'" ? ? ? 1_555 A 5CM 9 P ? ? A DT 8 A 5CM 9 1_555 ? ? ? ? ? ? ? 1.612 ? ? covale6 covale both ? A 5CM 9 "O3'" ? ? ? 1_555 A DG 10 P ? ? A 5CM 9 A DG 10 1_555 ? ? ? ? ? ? ? 1.616 ? ? covale7 covale one ? B DCZ 1 "O3'" ? ? ? 1_555 B DG 2 P ? ? B DCZ 13 B DG 14 1_555 ? ? ? ? ? ? ? 1.616 ? ? covale8 covale both ? B DG 2 "O3'" ? ? ? 1_555 B 5CM 3 P ? ? B DG 14 B 5CM 15 1_555 ? ? ? ? ? ? ? 1.615 ? ? covale9 covale both ? B 5CM 3 "O3'" ? ? ? 1_555 B 8OG 4 P ? ? B 5CM 15 B 8OG 16 1_555 ? ? ? ? ? ? ? 1.616 ? ? covale10 covale both ? B 8OG 4 "O3'" ? ? ? 1_555 B DA 5 P ? ? B 8OG 16 B DA 17 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale11 covale both ? B DT 8 "O3'" ? ? ? 1_555 B 5CM 9 P ? ? B DT 20 B 5CM 21 1_555 ? ? ? ? ? ? ? 1.612 ? ? covale12 covale both ? B 5CM 9 "O3'" ? ? ? 1_555 B DG 10 P ? ? B 5CM 21 B DG 22 1_555 ? ? ? ? ? ? ? 1.616 ? ? hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 11 N3 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 11 O2 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 11 N4 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A 5CM 3 N3 ? ? ? 1_555 B DG 10 N1 ? ? A 5CM 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A 5CM 3 N4 ? ? ? 1_555 B DG 10 O6 ? ? A 5CM 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A 5CM 3 O2 ? ? ? 1_555 B DG 10 N2 ? ? A 5CM 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A 8OG 4 N1 ? ? ? 1_555 B 5CM 9 N3 ? ? A 8OG 4 B 5CM 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A 8OG 4 N2 ? ? ? 1_555 B 5CM 9 O2 ? ? A 8OG 4 B 5CM 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A 8OG 4 O6 ? ? ? 1_555 B 5CM 9 N4 ? ? A 8OG 4 B 5CM 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 8 N3 ? ? A DA 5 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 8 O4 ? ? A DA 5 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 6 B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 6 B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 7 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 7 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 5 N1 ? ? A DT 8 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 5 N6 ? ? A DT 8 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A 5CM 9 N3 ? ? ? 1_555 B 8OG 4 N1 ? ? A 5CM 9 B 8OG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A 5CM 9 N4 ? ? ? 1_555 B 8OG 4 O6 ? ? A 5CM 9 B 8OG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A 5CM 9 O2 ? ? ? 1_555 B 8OG 4 N2 ? ? A 5CM 9 B 8OG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B 5CM 3 N3 ? ? A DG 10 B 5CM 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B 5CM 3 O2 ? ? A DG 10 B 5CM 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B 5CM 3 N4 ? ? A DG 10 B 5CM 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.71 117.00 -3.29 0.50 N 2 1 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.27 117.70 3.57 0.50 N 3 1 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 113.72 118.60 -4.88 0.60 N 4 1 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.92 117.00 -3.08 0.50 N 5 1 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.51 117.70 3.81 0.50 N 6 1 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 114.43 118.60 -4.17 0.60 N 7 1 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.74 108.30 2.44 0.30 N 8 1 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 117.34 122.90 -5.56 0.60 N 9 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 112.45 108.30 4.15 0.30 N 10 1 N1 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 122.56 118.90 3.66 0.60 N 11 1 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.54 121.90 -5.36 0.70 N 12 1 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.90 108.30 2.60 0.30 N 13 1 C4 B DA 17 ? ? C5 B DA 17 ? ? C6 B DA 17 ? ? 113.74 117.00 -3.26 0.50 N 14 1 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 121.31 117.70 3.61 0.50 N 15 1 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 113.72 118.60 -4.88 0.60 N 16 1 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 113.95 117.00 -3.05 0.50 N 17 1 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.45 117.70 3.75 0.50 N 18 1 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 114.61 118.60 -3.99 0.60 N 19 1 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 110.72 108.30 2.42 0.30 N 20 1 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 117.35 122.90 -5.55 0.60 N 21 1 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 112.61 108.30 4.31 0.30 N 22 1 N1 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 122.50 118.90 3.60 0.60 N 23 1 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 116.57 121.90 -5.33 0.70 N 24 1 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 110.73 108.30 2.43 0.30 N 25 2 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.73 117.00 -3.27 0.50 N 26 2 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.26 117.70 3.56 0.50 N 27 2 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 113.68 118.60 -4.92 0.60 N 28 2 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.96 117.00 -3.04 0.50 N 29 2 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.41 117.70 3.71 0.50 N 30 2 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 114.54 118.60 -4.06 0.60 N 31 2 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.75 108.30 2.45 0.30 N 32 2 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 117.37 122.90 -5.53 0.60 N 33 2 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 112.39 108.30 4.09 0.30 N 34 2 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.60 121.90 -5.30 0.70 N 35 2 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.33 108.30 2.03 0.30 N 36 2 C4 B DA 17 ? ? C5 B DA 17 ? ? C6 B DA 17 ? ? 113.77 117.00 -3.23 0.50 N 37 2 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 121.18 117.70 3.48 0.50 N 38 2 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 113.74 118.60 -4.86 0.60 N 39 2 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.43 117.70 3.73 0.50 N 40 2 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 114.60 118.60 -4.00 0.60 N 41 2 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 110.67 108.30 2.37 0.30 N 42 2 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 117.39 122.90 -5.51 0.60 N 43 2 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 112.73 108.30 4.43 0.30 N 44 2 N1 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 122.55 118.90 3.65 0.60 N 45 2 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 116.53 121.90 -5.37 0.70 N 46 2 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 110.83 108.30 2.53 0.30 N 47 3 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.76 117.00 -3.24 0.50 N 48 3 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.21 117.70 3.51 0.50 N 49 3 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 113.77 118.60 -4.83 0.60 N 50 3 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.93 117.00 -3.07 0.50 N 51 3 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.48 117.70 3.78 0.50 N 52 3 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 114.52 118.60 -4.08 0.60 N 53 3 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.74 108.30 2.44 0.30 N 54 3 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 117.30 122.90 -5.60 0.60 N 55 3 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 112.49 108.30 4.19 0.30 N 56 3 N1 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 122.50 118.90 3.60 0.60 N 57 3 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.61 121.90 -5.29 0.70 N 58 3 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.54 108.30 2.24 0.30 N 59 3 C4 B DA 17 ? ? C5 B DA 17 ? ? C6 B DA 17 ? ? 113.75 117.00 -3.25 0.50 N 60 3 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 121.24 117.70 3.54 0.50 N 61 3 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 113.71 118.60 -4.89 0.60 N 62 3 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 113.92 117.00 -3.08 0.50 N 63 3 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.48 117.70 3.78 0.50 N 64 3 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 114.49 118.60 -4.11 0.60 N 65 3 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 110.75 108.30 2.45 0.30 N 66 3 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 117.40 122.90 -5.50 0.60 N 67 3 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 112.53 108.30 4.23 0.30 N 68 3 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 116.59 121.90 -5.31 0.70 N 69 3 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 110.67 108.30 2.37 0.30 N 70 4 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.67 117.00 -3.33 0.50 N 71 4 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.26 117.70 3.56 0.50 N 72 4 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 113.72 118.60 -4.88 0.60 N 73 4 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.93 117.00 -3.07 0.50 N 74 4 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.51 117.70 3.81 0.50 N 75 4 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 114.53 118.60 -4.07 0.60 N 76 4 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.71 108.30 2.41 0.30 N 77 4 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 117.30 122.90 -5.60 0.60 N 78 4 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 112.48 108.30 4.18 0.30 N 79 4 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.56 121.90 -5.34 0.70 N 80 4 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.44 108.30 2.14 0.30 N 81 4 C4 B DA 17 ? ? C5 B DA 17 ? ? C6 B DA 17 ? ? 113.68 117.00 -3.32 0.50 N 82 4 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 121.26 117.70 3.56 0.50 N 83 4 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 113.67 118.60 -4.93 0.60 N 84 4 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 113.93 117.00 -3.07 0.50 N 85 4 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.47 117.70 3.77 0.50 N 86 4 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 114.58 118.60 -4.02 0.60 N 87 4 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 110.75 108.30 2.45 0.30 N 88 4 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 117.35 122.90 -5.55 0.60 N 89 4 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 112.37 108.30 4.07 0.30 N 90 4 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 116.66 121.90 -5.24 0.70 N 91 4 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 110.40 108.30 2.10 0.30 N 92 5 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.68 117.00 -3.32 0.50 N 93 5 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.24 117.70 3.54 0.50 N 94 5 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 113.79 118.60 -4.81 0.60 N 95 5 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.93 117.00 -3.07 0.50 N 96 5 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.42 117.70 3.72 0.50 N 97 5 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 114.48 118.60 -4.12 0.60 N 98 5 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.69 108.30 2.39 0.30 N 99 5 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 117.34 122.90 -5.56 0.60 N 100 5 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 112.45 108.30 4.15 0.30 N 101 5 N1 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 122.54 118.90 3.64 0.60 N 102 5 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.53 121.90 -5.37 0.70 N 103 5 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.80 108.30 2.50 0.30 N 104 5 C4 B DA 17 ? ? C5 B DA 17 ? ? C6 B DA 17 ? ? 113.67 117.00 -3.33 0.50 N 105 5 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 121.30 117.70 3.60 0.50 N 106 5 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 113.73 118.60 -4.87 0.60 N 107 5 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 113.90 117.00 -3.10 0.50 N 108 5 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.44 117.70 3.74 0.50 N 109 5 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 114.56 118.60 -4.04 0.60 N 110 5 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 110.72 108.30 2.42 0.30 N 111 5 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 117.38 122.90 -5.52 0.60 N 112 5 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 112.44 108.30 4.14 0.30 N 113 5 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 116.55 121.90 -5.35 0.70 N 114 5 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 110.56 108.30 2.26 0.30 N 115 6 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.70 117.00 -3.30 0.50 N 116 6 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.19 117.70 3.49 0.50 N 117 6 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 113.79 118.60 -4.81 0.60 N 118 6 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.92 117.00 -3.08 0.50 N 119 6 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.50 117.70 3.80 0.50 N 120 6 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 114.60 118.60 -4.00 0.60 N 121 6 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.82 108.30 2.52 0.30 N 122 6 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 117.36 122.90 -5.54 0.60 N 123 6 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 112.66 108.30 4.36 0.30 N 124 6 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.60 121.90 -5.30 0.70 N 125 6 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.70 108.30 2.40 0.30 N 126 6 C4 B DA 17 ? ? C5 B DA 17 ? ? C6 B DA 17 ? ? 113.69 117.00 -3.31 0.50 N 127 6 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 121.23 117.70 3.53 0.50 N 128 6 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 113.73 118.60 -4.87 0.60 N 129 6 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 113.90 117.00 -3.10 0.50 N 130 6 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.49 117.70 3.79 0.50 N 131 6 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 114.63 118.60 -3.97 0.60 N 132 6 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 110.73 108.30 2.43 0.30 N 133 6 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 117.38 122.90 -5.52 0.60 N 134 6 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 112.67 108.30 4.37 0.30 N 135 6 N1 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 122.56 118.90 3.66 0.60 N 136 6 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 116.60 121.90 -5.30 0.70 N 137 6 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 110.69 108.30 2.39 0.30 N 138 7 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.68 117.00 -3.32 0.50 N 139 7 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.29 117.70 3.59 0.50 N 140 7 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 113.67 118.60 -4.93 0.60 N 141 7 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.98 117.00 -3.02 0.50 N 142 7 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.45 117.70 3.75 0.50 N 143 7 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 114.50 118.60 -4.10 0.60 N 144 7 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.78 108.30 2.48 0.30 N 145 7 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 117.39 122.90 -5.51 0.60 N 146 7 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 112.38 108.30 4.08 0.30 N 147 7 N1 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 122.50 118.90 3.60 0.60 N 148 7 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.58 121.90 -5.32 0.70 N 149 7 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.73 108.30 2.43 0.30 N 150 7 C4 B DA 17 ? ? C5 B DA 17 ? ? C6 B DA 17 ? ? 113.72 117.00 -3.28 0.50 N 151 7 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 121.25 117.70 3.55 0.50 N 152 7 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 113.77 118.60 -4.83 0.60 N 153 7 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 113.91 117.00 -3.09 0.50 N 154 7 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.48 117.70 3.78 0.50 N 155 7 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 114.57 118.60 -4.03 0.60 N 156 7 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 110.73 108.30 2.43 0.30 N 157 7 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 117.39 122.90 -5.51 0.60 N 158 7 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 112.60 108.30 4.30 0.30 N 159 7 N1 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 122.55 118.90 3.65 0.60 N 160 7 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 116.48 121.90 -5.42 0.70 N 161 7 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 110.66 108.30 2.36 0.30 N 162 8 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.68 117.00 -3.32 0.50 N 163 8 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.32 117.70 3.62 0.50 N 164 8 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 113.64 118.60 -4.96 0.60 N 165 8 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.98 117.00 -3.02 0.50 N 166 8 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.43 117.70 3.73 0.50 N 167 8 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 114.60 118.60 -4.00 0.60 N 168 8 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.80 108.30 2.50 0.30 N 169 8 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 117.28 122.90 -5.62 0.60 N 170 8 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 112.50 108.30 4.20 0.30 N 171 8 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.67 121.90 -5.23 0.70 N 172 8 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.60 108.30 2.30 0.30 N 173 8 C4 B DA 17 ? ? C5 B DA 17 ? ? C6 B DA 17 ? ? 113.63 117.00 -3.37 0.50 N 174 8 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 121.32 117.70 3.62 0.50 N 175 8 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 113.63 118.60 -4.97 0.60 N 176 8 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 113.94 117.00 -3.06 0.50 N 177 8 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.46 117.70 3.76 0.50 N 178 8 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 114.50 118.60 -4.10 0.60 N 179 8 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 110.79 108.30 2.49 0.30 N 180 8 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 117.44 122.90 -5.46 0.60 N 181 8 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 112.39 108.30 4.09 0.30 N 182 8 N1 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 122.60 118.90 3.70 0.60 N 183 8 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 116.56 121.90 -5.34 0.70 N 184 8 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 110.68 108.30 2.38 0.30 N 185 9 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.68 117.00 -3.32 0.50 N 186 9 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.21 117.70 3.51 0.50 N 187 9 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 113.67 118.60 -4.93 0.60 N 188 9 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.98 117.00 -3.02 0.50 N 189 9 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.42 117.70 3.72 0.50 N 190 9 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 114.60 118.60 -4.00 0.60 N 191 9 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.82 108.30 2.52 0.30 N 192 9 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 117.36 122.90 -5.54 0.60 N 193 9 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 112.59 108.30 4.29 0.30 N 194 9 N1 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 122.51 118.90 3.61 0.60 N 195 9 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.61 121.90 -5.29 0.70 N 196 9 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.92 108.30 2.62 0.30 N 197 9 C4 B DA 17 ? ? C5 B DA 17 ? ? C6 B DA 17 ? ? 113.78 117.00 -3.22 0.50 N 198 9 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 121.24 117.70 3.54 0.50 N 199 9 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 113.72 118.60 -4.88 0.60 N 200 9 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 113.96 117.00 -3.04 0.50 N 201 9 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.46 117.70 3.76 0.50 N 202 9 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 114.56 118.60 -4.04 0.60 N 203 9 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 110.74 108.30 2.44 0.30 N 204 9 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 117.43 122.90 -5.47 0.60 N 205 9 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 112.46 108.30 4.16 0.30 N 206 9 N1 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 122.52 118.90 3.62 0.60 N 207 9 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 116.56 121.90 -5.34 0.70 N 208 9 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 110.47 108.30 2.17 0.30 N 209 10 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.71 117.00 -3.29 0.50 N 210 10 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.21 117.70 3.51 0.50 N 211 10 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 113.73 118.60 -4.87 0.60 N 212 10 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.96 117.00 -3.04 0.50 N 213 10 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.41 117.70 3.71 0.50 N 214 10 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 114.53 118.60 -4.07 0.60 N 215 10 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.77 108.30 2.47 0.30 N 216 10 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 117.40 122.90 -5.50 0.60 N 217 10 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 112.37 108.30 4.07 0.30 N 218 10 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.58 121.90 -5.32 0.70 N 219 10 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.52 108.30 2.22 0.30 N 220 10 C4 B DA 17 ? ? C5 B DA 17 ? ? C6 B DA 17 ? ? 113.70 117.00 -3.30 0.50 N 221 10 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 121.29 117.70 3.59 0.50 N 222 10 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 113.69 118.60 -4.91 0.60 N 223 10 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 113.95 117.00 -3.05 0.50 N 224 10 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.46 117.70 3.76 0.50 N 225 10 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 114.54 118.60 -4.06 0.60 N 226 10 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 110.76 108.30 2.46 0.30 N 227 10 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 117.39 122.90 -5.51 0.60 N 228 10 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 112.47 108.30 4.17 0.30 N 229 10 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 116.56 121.90 -5.34 0.70 N 230 10 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 110.55 108.30 2.25 0.30 N 231 11 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.69 117.00 -3.31 0.50 N 232 11 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.27 117.70 3.57 0.50 N 233 11 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 113.75 118.60 -4.85 0.60 N 234 11 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.98 117.00 -3.02 0.50 N 235 11 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.46 117.70 3.76 0.50 N 236 11 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 114.50 118.60 -4.10 0.60 N 237 11 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.78 108.30 2.48 0.30 N 238 11 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 117.34 122.90 -5.56 0.60 N 239 11 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 112.58 108.30 4.28 0.30 N 240 11 N1 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 122.54 118.90 3.64 0.60 N 241 11 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.59 121.90 -5.31 0.70 N 242 11 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.84 108.30 2.54 0.30 N 243 11 C4 B DA 17 ? ? C5 B DA 17 ? ? C6 B DA 17 ? ? 113.70 117.00 -3.30 0.50 N 244 11 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 121.29 117.70 3.59 0.50 N 245 11 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 113.73 118.60 -4.87 0.60 N 246 11 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 113.93 117.00 -3.07 0.50 N 247 11 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 121.42 117.70 3.72 0.50 N 248 11 N1 B DA 18 ? ? C6 B DA 18 ? ? N6 B DA 18 ? ? 114.52 118.60 -4.08 0.60 N 249 11 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 110.70 108.30 2.40 0.30 N 250 11 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 117.38 122.90 -5.52 0.60 N 251 11 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 112.41 108.30 4.11 0.30 N 252 11 N3 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 116.59 121.90 -5.31 0.70 N 253 11 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 110.25 108.30 1.95 0.30 N # _pdbx_nmr_ensemble.entry_id 6ALS _pdbx_nmr_ensemble.conformers_calculated_total_number 18 _pdbx_nmr_ensemble.conformers_submitted_total_number 11 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6ALS _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'minimized average structure' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents ;50 mM sodium chloride, 10 mM potassium phosphate, 0.1 mM EDTA, 1 mM DNA (5'-D(*(DC5)P*GP*(DMC)P*(8OG)P*AP*AP*TP*TP*(DMC)P*GP*CP*(DG3))-3'), 100% D2O ; _pdbx_nmr_sample_details.solvent_system '100% D2O' _pdbx_nmr_sample_details.label dd11 _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'sodium chloride' 50 ? mM 'natural abundance' 1 'potassium phosphate' 10 ? mM 'natural abundance' 1 EDTA 0.1 ? mM 'natural abundance' 1 ;DNA (5'-D(*(DC5)P*GP*(DMC)P*(8OG)P*AP*AP*TP*TP*(DMC)P*GP*CP*(DG3))-3') ; 1 ? mM 'natural abundance' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.details _pdbx_nmr_exptl_sample_conditions.ionic_strength_err _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_err _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.pressure_err _pdbx_nmr_exptl_sample_conditions.temperature_err _pdbx_nmr_exptl_sample_conditions.temperature_units 1 298 ? ambient 6.8 120 ? ? mM '100% D2O' ? pH ? ? K 2 279 ? ambient 6.8 120 ? ? mM '10% D2O' ? pH ? ? K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H NOESY' 1 isotropic 2 2 1 '2D 1H-1H NOESY' 1 isotropic 3 1 1 '2D 1H-1H TOCSY' 1 isotropic # _pdbx_nmr_refine.entry_id 6ALS _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, and Kollman' 2 'structure calculation' Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, and Kollman' 3 'chemical shift assignment' NMRView ? 'Johnson, One Moon Scientific' 4 'peak picking' NMRView ? 'Johnson, One Moon Scientific' 5 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 6 'data analysis' CYANA ? 'Guntert, Mumenthaler and Wuthrich' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5CM N1 N N N 1 5CM C2 C N N 2 5CM N3 N N N 3 5CM C4 C N N 4 5CM C5 C N N 5 5CM C5A C N N 6 5CM C6 C N N 7 5CM O2 O N N 8 5CM N4 N N N 9 5CM "C1'" C N R 10 5CM "C2'" C N N 11 5CM "C3'" C N S 12 5CM "C4'" C N R 13 5CM "O4'" O N N 14 5CM "O3'" O N N 15 5CM "C5'" C N N 16 5CM "O5'" O N N 17 5CM P P N N 18 5CM OP1 O N N 19 5CM OP2 O N N 20 5CM OP3 O N N 21 5CM H5A1 H N N 22 5CM H5A2 H N N 23 5CM H5A3 H N N 24 5CM H6 H N N 25 5CM HN41 H N N 26 5CM HN42 H N N 27 5CM "H1'" H N N 28 5CM "H2'" H N N 29 5CM "H2''" H N N 30 5CM "H3'" H N N 31 5CM "H4'" H N N 32 5CM "HO3'" H N N 33 5CM "H5'" H N N 34 5CM "H5''" H N N 35 5CM HOP2 H N N 36 5CM HOP3 H N N 37 8OG OP3 O N N 38 8OG P P N N 39 8OG OP1 O N N 40 8OG OP2 O N N 41 8OG "O5'" O N N 42 8OG "C5'" C N N 43 8OG "C4'" C N R 44 8OG "O4'" O N N 45 8OG "C3'" C N S 46 8OG "O3'" O N N 47 8OG "C2'" C N N 48 8OG "C1'" C N R 49 8OG N9 N N N 50 8OG C8 C N N 51 8OG N7 N N N 52 8OG C5 C N N 53 8OG C6 C N N 54 8OG O6 O N N 55 8OG N1 N N N 56 8OG C2 C N N 57 8OG N2 N N N 58 8OG N3 N N N 59 8OG C4 C N N 60 8OG O8 O N N 61 8OG HOP3 H N N 62 8OG HOP2 H N N 63 8OG "H5'" H N N 64 8OG "H5''" H N N 65 8OG "H4'" H N N 66 8OG "H3'" H N N 67 8OG "HO3'" H N N 68 8OG "H2'" H N N 69 8OG "H2''" H N N 70 8OG "H1'" H N N 71 8OG H7 H N N 72 8OG H1 H N N 73 8OG H21 H N N 74 8OG H22 H N N 75 DA OP3 O N N 76 DA P P N N 77 DA OP1 O N N 78 DA OP2 O N N 79 DA "O5'" O N N 80 DA "C5'" C N N 81 DA "C4'" C N R 82 DA "O4'" O N N 83 DA "C3'" C N S 84 DA "O3'" O N N 85 DA "C2'" C N N 86 DA "C1'" C N R 87 DA N9 N Y N 88 DA C8 C Y N 89 DA N7 N Y N 90 DA C5 C Y N 91 DA C6 C Y N 92 DA N6 N N N 93 DA N1 N Y N 94 DA C2 C Y N 95 DA N3 N Y N 96 DA C4 C Y N 97 DA HOP3 H N N 98 DA HOP2 H N N 99 DA "H5'" H N N 100 DA "H5''" H N N 101 DA "H4'" H N N 102 DA "H3'" H N N 103 DA "HO3'" H N N 104 DA "H2'" H N N 105 DA "H2''" H N N 106 DA "H1'" H N N 107 DA H8 H N N 108 DA H61 H N N 109 DA H62 H N N 110 DA H2 H N N 111 DC OP3 O N N 112 DC P P N N 113 DC OP1 O N N 114 DC OP2 O N N 115 DC "O5'" O N N 116 DC "C5'" C N N 117 DC "C4'" C N R 118 DC "O4'" O N N 119 DC "C3'" C N S 120 DC "O3'" O N N 121 DC "C2'" C N N 122 DC "C1'" C N R 123 DC N1 N N N 124 DC C2 C N N 125 DC O2 O N N 126 DC N3 N N N 127 DC C4 C N N 128 DC N4 N N N 129 DC C5 C N N 130 DC C6 C N N 131 DC HOP3 H N N 132 DC HOP2 H N N 133 DC "H5'" H N N 134 DC "H5''" H N N 135 DC "H4'" H N N 136 DC "H3'" H N N 137 DC "HO3'" H N N 138 DC "H2'" H N N 139 DC "H2''" H N N 140 DC "H1'" H N N 141 DC H41 H N N 142 DC H42 H N N 143 DC H5 H N N 144 DC H6 H N N 145 DCZ N1 N N N 146 DCZ C2 C N N 147 DCZ N3 N N N 148 DCZ C4 C N N 149 DCZ C5 C N N 150 DCZ C6 C N N 151 DCZ O2 O N N 152 DCZ N4 N N N 153 DCZ "C1'" C N R 154 DCZ "C2'" C N N 155 DCZ "C3'" C N S 156 DCZ "C4'" C N R 157 DCZ "O4'" O N N 158 DCZ "O3'" O N N 159 DCZ "C5'" C N N 160 DCZ "O5'" O N N 161 DCZ H5 H N N 162 DCZ H6 H N N 163 DCZ HN41 H N N 164 DCZ HN42 H N N 165 DCZ "H1'" H N N 166 DCZ "H2'1" H N N 167 DCZ "H2'2" H N N 168 DCZ "H3'" H N N 169 DCZ "H4'" H N N 170 DCZ "HO3'" H N N 171 DCZ "H5'1" H N N 172 DCZ "H5'2" H N N 173 DCZ HO51 H N N 174 DG OP3 O N N 175 DG P P N N 176 DG OP1 O N N 177 DG OP2 O N N 178 DG "O5'" O N N 179 DG "C5'" C N N 180 DG "C4'" C N R 181 DG "O4'" O N N 182 DG "C3'" C N S 183 DG "O3'" O N N 184 DG "C2'" C N N 185 DG "C1'" C N R 186 DG N9 N Y N 187 DG C8 C Y N 188 DG N7 N Y N 189 DG C5 C Y N 190 DG C6 C N N 191 DG O6 O N N 192 DG N1 N N N 193 DG C2 C N N 194 DG N2 N N N 195 DG N3 N N N 196 DG C4 C Y N 197 DG HOP3 H N N 198 DG HOP2 H N N 199 DG "H5'" H N N 200 DG "H5''" H N N 201 DG "H4'" H N N 202 DG "H3'" H N N 203 DG "HO3'" H N N 204 DG "H2'" H N N 205 DG "H2''" H N N 206 DG "H1'" H N N 207 DG H8 H N N 208 DG H1 H N N 209 DG H21 H N N 210 DG H22 H N N 211 DT OP3 O N N 212 DT P P N N 213 DT OP1 O N N 214 DT OP2 O N N 215 DT "O5'" O N N 216 DT "C5'" C N N 217 DT "C4'" C N R 218 DT "O4'" O N N 219 DT "C3'" C N S 220 DT "O3'" O N N 221 DT "C2'" C N N 222 DT "C1'" C N R 223 DT N1 N N N 224 DT C2 C N N 225 DT O2 O N N 226 DT N3 N N N 227 DT C4 C N N 228 DT O4 O N N 229 DT C5 C N N 230 DT C7 C N N 231 DT C6 C N N 232 DT HOP3 H N N 233 DT HOP2 H N N 234 DT "H5'" H N N 235 DT "H5''" H N N 236 DT "H4'" H N N 237 DT "H3'" H N N 238 DT "HO3'" H N N 239 DT "H2'" H N N 240 DT "H2''" H N N 241 DT "H1'" H N N 242 DT H3 H N N 243 DT H71 H N N 244 DT H72 H N N 245 DT H73 H N N 246 DT H6 H N N 247 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5CM N1 C2 sing N N 1 5CM N1 C6 sing N N 2 5CM N1 "C1'" sing N N 3 5CM C2 N3 sing N N 4 5CM C2 O2 doub N N 5 5CM N3 C4 doub N N 6 5CM C4 C5 sing N N 7 5CM C4 N4 sing N N 8 5CM C5 C5A sing N N 9 5CM C5 C6 doub N N 10 5CM C5A H5A1 sing N N 11 5CM C5A H5A2 sing N N 12 5CM C5A H5A3 sing N N 13 5CM C6 H6 sing N N 14 5CM N4 HN41 sing N N 15 5CM N4 HN42 sing N N 16 5CM "C1'" "C2'" sing N N 17 5CM "C1'" "O4'" sing N N 18 5CM "C1'" "H1'" sing N N 19 5CM "C2'" "C3'" sing N N 20 5CM "C2'" "H2'" sing N N 21 5CM "C2'" "H2''" sing N N 22 5CM "C3'" "C4'" sing N N 23 5CM "C3'" "O3'" sing N N 24 5CM "C3'" "H3'" sing N N 25 5CM "C4'" "O4'" sing N N 26 5CM "C4'" "C5'" sing N N 27 5CM "C4'" "H4'" sing N N 28 5CM "O3'" "HO3'" sing N N 29 5CM "C5'" "O5'" sing N N 30 5CM "C5'" "H5'" sing N N 31 5CM "C5'" "H5''" sing N N 32 5CM "O5'" P sing N N 33 5CM P OP1 doub N N 34 5CM P OP2 sing N N 35 5CM P OP3 sing N N 36 5CM OP2 HOP2 sing N N 37 5CM OP3 HOP3 sing N N 38 8OG OP3 P sing N N 39 8OG OP3 HOP3 sing N N 40 8OG P OP1 doub N N 41 8OG P OP2 sing N N 42 8OG P "O5'" sing N N 43 8OG OP2 HOP2 sing N N 44 8OG "O5'" "C5'" sing N N 45 8OG "C5'" "C4'" sing N N 46 8OG "C5'" "H5'" sing N N 47 8OG "C5'" "H5''" sing N N 48 8OG "C4'" "O4'" sing N N 49 8OG "C4'" "C3'" sing N N 50 8OG "C4'" "H4'" sing N N 51 8OG "O4'" "C1'" sing N N 52 8OG "C3'" "O3'" sing N N 53 8OG "C3'" "C2'" sing N N 54 8OG "C3'" "H3'" sing N N 55 8OG "O3'" "HO3'" sing N N 56 8OG "C2'" "C1'" sing N N 57 8OG "C2'" "H2'" sing N N 58 8OG "C2'" "H2''" sing N N 59 8OG "C1'" N9 sing N N 60 8OG "C1'" "H1'" sing N N 61 8OG N9 C8 sing N N 62 8OG N9 C4 sing N N 63 8OG C8 N7 sing N N 64 8OG C8 O8 doub N N 65 8OG N7 C5 sing N N 66 8OG N7 H7 sing N N 67 8OG C5 C6 sing N N 68 8OG C5 C4 doub N N 69 8OG C6 O6 doub N N 70 8OG C6 N1 sing N N 71 8OG N1 C2 sing N N 72 8OG N1 H1 sing N N 73 8OG C2 N2 sing N N 74 8OG C2 N3 doub N N 75 8OG N2 H21 sing N N 76 8OG N2 H22 sing N N 77 8OG N3 C4 sing N N 78 DA OP3 P sing N N 79 DA OP3 HOP3 sing N N 80 DA P OP1 doub N N 81 DA P OP2 sing N N 82 DA P "O5'" sing N N 83 DA OP2 HOP2 sing N N 84 DA "O5'" "C5'" sing N N 85 DA "C5'" "C4'" sing N N 86 DA "C5'" "H5'" sing N N 87 DA "C5'" "H5''" sing N N 88 DA "C4'" "O4'" sing N N 89 DA "C4'" "C3'" sing N N 90 DA "C4'" "H4'" sing N N 91 DA "O4'" "C1'" sing N N 92 DA "C3'" "O3'" sing N N 93 DA "C3'" "C2'" sing N N 94 DA "C3'" "H3'" sing N N 95 DA "O3'" "HO3'" sing N N 96 DA "C2'" "C1'" sing N N 97 DA "C2'" "H2'" sing N N 98 DA "C2'" "H2''" sing N N 99 DA "C1'" N9 sing N N 100 DA "C1'" "H1'" sing N N 101 DA N9 C8 sing Y N 102 DA N9 C4 sing Y N 103 DA C8 N7 doub Y N 104 DA C8 H8 sing N N 105 DA N7 C5 sing Y N 106 DA C5 C6 sing Y N 107 DA C5 C4 doub Y N 108 DA C6 N6 sing N N 109 DA C6 N1 doub Y N 110 DA N6 H61 sing N N 111 DA N6 H62 sing N N 112 DA N1 C2 sing Y N 113 DA C2 N3 doub Y N 114 DA C2 H2 sing N N 115 DA N3 C4 sing Y N 116 DC OP3 P sing N N 117 DC OP3 HOP3 sing N N 118 DC P OP1 doub N N 119 DC P OP2 sing N N 120 DC P "O5'" sing N N 121 DC OP2 HOP2 sing N N 122 DC "O5'" "C5'" sing N N 123 DC "C5'" "C4'" sing N N 124 DC "C5'" "H5'" sing N N 125 DC "C5'" "H5''" sing N N 126 DC "C4'" "O4'" sing N N 127 DC "C4'" "C3'" sing N N 128 DC "C4'" "H4'" sing N N 129 DC "O4'" "C1'" sing N N 130 DC "C3'" "O3'" sing N N 131 DC "C3'" "C2'" sing N N 132 DC "C3'" "H3'" sing N N 133 DC "O3'" "HO3'" sing N N 134 DC "C2'" "C1'" sing N N 135 DC "C2'" "H2'" sing N N 136 DC "C2'" "H2''" sing N N 137 DC "C1'" N1 sing N N 138 DC "C1'" "H1'" sing N N 139 DC N1 C2 sing N N 140 DC N1 C6 sing N N 141 DC C2 O2 doub N N 142 DC C2 N3 sing N N 143 DC N3 C4 doub N N 144 DC C4 N4 sing N N 145 DC C4 C5 sing N N 146 DC N4 H41 sing N N 147 DC N4 H42 sing N N 148 DC C5 C6 doub N N 149 DC C5 H5 sing N N 150 DC C6 H6 sing N N 151 DCZ N1 C2 sing N N 152 DCZ N1 C6 sing N N 153 DCZ N1 "C1'" sing N N 154 DCZ C2 N3 sing N N 155 DCZ C2 O2 doub N N 156 DCZ N3 C4 doub N N 157 DCZ C4 C5 sing N N 158 DCZ C4 N4 sing N N 159 DCZ C5 C6 doub N N 160 DCZ C5 H5 sing N N 161 DCZ C6 H6 sing N N 162 DCZ N4 HN41 sing N N 163 DCZ N4 HN42 sing N N 164 DCZ "C1'" "C2'" sing N N 165 DCZ "C1'" "O4'" sing N N 166 DCZ "C1'" "H1'" sing N N 167 DCZ "C2'" "C3'" sing N N 168 DCZ "C2'" "H2'1" sing N N 169 DCZ "C2'" "H2'2" sing N N 170 DCZ "C3'" "C4'" sing N N 171 DCZ "C3'" "O3'" sing N N 172 DCZ "C3'" "H3'" sing N N 173 DCZ "C4'" "O4'" sing N N 174 DCZ "C4'" "C5'" sing N N 175 DCZ "C4'" "H4'" sing N N 176 DCZ "O3'" "HO3'" sing N N 177 DCZ "C5'" "O5'" sing N N 178 DCZ "C5'" "H5'1" sing N N 179 DCZ "C5'" "H5'2" sing N N 180 DCZ "O5'" HO51 sing N N 181 DG OP3 P sing N N 182 DG OP3 HOP3 sing N N 183 DG P OP1 doub N N 184 DG P OP2 sing N N 185 DG P "O5'" sing N N 186 DG OP2 HOP2 sing N N 187 DG "O5'" "C5'" sing N N 188 DG "C5'" "C4'" sing N N 189 DG "C5'" "H5'" sing N N 190 DG "C5'" "H5''" sing N N 191 DG "C4'" "O4'" sing N N 192 DG "C4'" "C3'" sing N N 193 DG "C4'" "H4'" sing N N 194 DG "O4'" "C1'" sing N N 195 DG "C3'" "O3'" sing N N 196 DG "C3'" "C2'" sing N N 197 DG "C3'" "H3'" sing N N 198 DG "O3'" "HO3'" sing N N 199 DG "C2'" "C1'" sing N N 200 DG "C2'" "H2'" sing N N 201 DG "C2'" "H2''" sing N N 202 DG "C1'" N9 sing N N 203 DG "C1'" "H1'" sing N N 204 DG N9 C8 sing Y N 205 DG N9 C4 sing Y N 206 DG C8 N7 doub Y N 207 DG C8 H8 sing N N 208 DG N7 C5 sing Y N 209 DG C5 C6 sing N N 210 DG C5 C4 doub Y N 211 DG C6 O6 doub N N 212 DG C6 N1 sing N N 213 DG N1 C2 sing N N 214 DG N1 H1 sing N N 215 DG C2 N2 sing N N 216 DG C2 N3 doub N N 217 DG N2 H21 sing N N 218 DG N2 H22 sing N N 219 DG N3 C4 sing N N 220 DT OP3 P sing N N 221 DT OP3 HOP3 sing N N 222 DT P OP1 doub N N 223 DT P OP2 sing N N 224 DT P "O5'" sing N N 225 DT OP2 HOP2 sing N N 226 DT "O5'" "C5'" sing N N 227 DT "C5'" "C4'" sing N N 228 DT "C5'" "H5'" sing N N 229 DT "C5'" "H5''" sing N N 230 DT "C4'" "O4'" sing N N 231 DT "C4'" "C3'" sing N N 232 DT "C4'" "H4'" sing N N 233 DT "O4'" "C1'" sing N N 234 DT "C3'" "O3'" sing N N 235 DT "C3'" "C2'" sing N N 236 DT "C3'" "H3'" sing N N 237 DT "O3'" "HO3'" sing N N 238 DT "C2'" "C1'" sing N N 239 DT "C2'" "H2'" sing N N 240 DT "C2'" "H2''" sing N N 241 DT "C1'" N1 sing N N 242 DT "C1'" "H1'" sing N N 243 DT N1 C2 sing N N 244 DT N1 C6 sing N N 245 DT C2 O2 doub N N 246 DT C2 N3 sing N N 247 DT N3 C4 sing N N 248 DT N3 H3 sing N N 249 DT C4 O4 doub N N 250 DT C4 C5 sing N N 251 DT C5 C7 sing N N 252 DT C5 C6 doub N N 253 DT C7 H71 sing N N 254 DT C7 H72 sing N N 255 DT C7 H73 sing N N 256 DT C6 H6 sing N N 257 # _ndb_struct_conf_na.entry_id 6ALS _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 2 1_555 B DC 11 1_555 -0.297 -0.098 0.021 0.187 -0.414 -2.235 1 A_DG2:DC23_B A 2 ? B 23 ? 19 1 1 A 5CM 3 1_555 B DG 10 1_555 0.317 -0.040 -0.113 6.407 -10.326 1.811 2 A_5CM3:DG22_B A 3 ? B 22 ? 19 1 1 A 8OG 4 1_555 B 5CM 9 1_555 -0.456 -0.107 0.191 12.989 -8.553 0.796 3 A_8OG4:5CM21_B A 4 ? B 21 ? 19 1 1 A DA 5 1_555 B DT 8 1_555 0.113 -0.011 -0.079 9.924 -17.488 0.441 4 A_DA5:DT20_B A 5 ? B 20 ? 20 1 1 A DA 6 1_555 B DT 7 1_555 0.154 -0.032 -0.249 5.446 -25.424 -2.834 5 A_DA6:DT19_B A 6 ? B 19 ? 20 1 1 A DT 7 1_555 B DA 6 1_555 -0.158 -0.029 -0.250 -4.596 -26.042 -3.503 6 A_DT7:DA18_B A 7 ? B 18 ? 20 1 1 A DT 8 1_555 B DA 5 1_555 -0.104 -0.014 -0.090 -10.589 -18.979 -0.117 7 A_DT8:DA17_B A 8 ? B 17 ? 20 1 1 A 5CM 9 1_555 B 8OG 4 1_555 0.467 -0.108 0.207 -14.578 -8.501 0.563 8 A_5CM9:8OG16_B A 9 ? B 16 ? 19 1 1 A DG 10 1_555 B 5CM 3 1_555 -0.324 -0.044 -0.124 -7.021 -10.110 1.728 9 A_DG10:5CM15_B A 10 ? B 15 ? 19 1 1 A DC 11 1_555 B DG 2 1_555 0.295 -0.100 0.002 0.023 -0.031 -2.520 10 A_DC11:DG14_B A 11 ? B 14 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 2 1_555 B DC 11 1_555 A 5CM 3 1_555 B DG 10 1_555 0.489 -0.345 3.132 2.209 9.370 33.160 -1.963 -0.498 2.954 16.004 -3.774 34.491 1 AA_DG25CM3:DG22DC23_BB A 2 ? B 23 ? A 3 ? B 22 ? 1 A 5CM 3 1_555 B DG 10 1_555 A 8OG 4 1_555 B 5CM 9 1_555 0.308 -0.894 3.032 -3.037 12.981 20.393 -5.573 -1.538 2.038 32.553 7.617 24.326 2 AA_5CM38OG4:5CM21DG22_BB A 3 ? B 22 ? A 4 ? B 21 ? 1 A 8OG 4 1_555 B 5CM 9 1_555 A DA 5 1_555 B DT 8 1_555 -1.308 0.069 3.301 -2.010 3.126 40.197 -0.259 1.665 3.356 4.536 2.917 40.361 3 AA_8OG4DA5:DT205CM21_BB A 4 ? B 21 ? A 5 ? B 20 ? 1 A DA 5 1_555 B DT 8 1_555 A DA 6 1_555 B DT 7 1_555 -0.486 -0.144 3.286 -0.136 6.657 37.547 -1.065 0.727 3.217 10.243 0.210 38.112 4 AA_DA5DA6:DT19DT20_BB A 5 ? B 20 ? A 6 ? B 19 ? 1 A DA 6 1_555 B DT 7 1_555 A DT 7 1_555 B DA 6 1_555 -0.054 -0.449 3.300 -0.236 0.623 34.941 -0.843 0.054 3.292 1.038 0.394 34.947 5 AA_DA6DT7:DA18DT19_BB A 6 ? B 19 ? A 7 ? B 18 ? 1 A DT 7 1_555 B DA 6 1_555 A DT 8 1_555 B DA 5 1_555 0.391 -0.141 3.310 0.293 7.247 37.297 -1.150 -0.564 3.230 11.202 -0.453 37.971 6 AA_DT7DT8:DA17DA18_BB A 7 ? B 18 ? A 8 ? B 17 ? 1 A DT 8 1_555 B DA 5 1_555 A 5CM 9 1_555 B 8OG 4 1_555 1.329 0.134 3.318 2.064 3.349 40.437 -0.189 -1.679 3.379 4.832 -2.977 40.620 7 AA_DT85CM9:8OG16DA17_BB A 8 ? B 17 ? A 9 ? B 16 ? 1 A 5CM 9 1_555 B 8OG 4 1_555 A DG 10 1_555 B 5CM 3 1_555 -0.276 -0.751 3.007 3.196 13.250 20.464 -5.246 1.488 2.076 32.986 -7.958 24.548 8 AA_5CM9DG10:5CM158OG16_BB A 9 ? B 16 ? A 10 ? B 15 ? 1 A DG 10 1_555 B 5CM 3 1_555 A DC 11 1_555 B DG 2 1_555 -0.467 -0.256 3.116 -2.034 9.516 33.186 -1.826 0.489 2.955 16.232 3.469 34.545 9 AA_DG10DC11:DG145CM15_BB A 10 ? B 15 ? A 11 ? B 14 ? # _pdbx_audit_support.funding_organization 'National Science Foundation (NSF, United States)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 1244641 _pdbx_audit_support.ordinal 1 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE III' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 6ALS _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_