HEADER PROTEIN TRANSPORT 22-OCT-17 6BDC TITLE STRUCTURE OF HCP1 FROM FLAVOBACTERIUM JOHNSONIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HCP1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FLAVOBACTERIUM JOHNSONIAE (STRAIN ATCC 17061 / SOURCE 3 DSM 2064 / UW101); SOURCE 4 ORGANISM_COMMON: CYTOPHAGA JOHNSONAE; SOURCE 5 ORGANISM_TAXID: 376686; SOURCE 6 STRAIN: ATCC 17061 / DSM 2064 / UW101; SOURCE 7 GENE: FJOH_3262; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS TYPE VI SECRETION, HAEMOLYSIN COREGULATED PROTEIN, EFFECTOR KEYWDS 2 CHAPERONE, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR A.J.BOHN,A.B.RUSSELL,H.ROBINSON,J.D.MOUGOUS,J.C.WHITNEY REVDAT 2 11-DEC-19 6BDC 1 REMARK REVDAT 1 27-DEC-17 6BDC 0 JRNL AUTH A.J.BOHN,A.B.RUSSELL,H.ROBINSON,J.D.MOUGOUS,J.C.WHITNEY JRNL TITL STRUCTURE OF HCP1 FROM FLAVOBACTERIUM JOHNSONIAE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 9779 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.252 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.281 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.020 REMARK 3 FREE R VALUE TEST SET COUNT : 980 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.4622 - 4.7720 1.00 1312 146 0.2239 0.2355 REMARK 3 2 4.7720 - 3.7885 1.00 1301 146 0.2223 0.2621 REMARK 3 3 3.7885 - 3.3099 0.99 1282 143 0.2584 0.3236 REMARK 3 4 3.3099 - 3.0073 1.00 1297 149 0.2687 0.3063 REMARK 3 5 3.0073 - 2.7918 0.99 1280 142 0.3388 0.3948 REMARK 3 6 2.7918 - 2.6273 0.95 1240 135 0.3570 0.4245 REMARK 3 7 2.6273 - 2.4957 0.84 1087 119 0.3666 0.4144 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 40.390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 892 REMARK 3 ANGLE : 0.702 1215 REMARK 3 CHIRALITY : 0.041 143 REMARK 3 PLANARITY : 0.003 160 REMARK 3 DIHEDRAL : 15.041 517 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8573 20.1640 21.7742 REMARK 3 T TENSOR REMARK 3 T11: 0.7838 T22: 0.8066 REMARK 3 T33: 1.1148 T12: -0.0381 REMARK 3 T13: -0.2931 T23: -0.2025 REMARK 3 L TENSOR REMARK 3 L11: 8.7596 L22: 7.4841 REMARK 3 L33: 7.7642 L12: -5.5930 REMARK 3 L13: -4.1475 L23: 2.5887 REMARK 3 S TENSOR REMARK 3 S11: -0.0749 S12: -0.1563 S13: -0.7063 REMARK 3 S21: 0.9295 S22: -0.1793 S23: -0.7529 REMARK 3 S31: 0.1865 S32: -0.2567 S33: 0.3272 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.5632 13.2660 6.4092 REMARK 3 T TENSOR REMARK 3 T11: 1.0704 T22: 1.1442 REMARK 3 T33: 1.7201 T12: 0.0870 REMARK 3 T13: 0.1653 T23: 0.1671 REMARK 3 L TENSOR REMARK 3 L11: 3.0925 L22: 1.6470 REMARK 3 L33: 7.6679 L12: 2.1100 REMARK 3 L13: -3.7812 L23: -1.7653 REMARK 3 S TENSOR REMARK 3 S11: 1.8022 S12: 0.2375 S13: 1.2342 REMARK 3 S21: -2.9831 S22: -0.1085 S23: -3.7177 REMARK 3 S31: -1.1589 S32: 0.4835 S33: -0.2791 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 41 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.9131 27.7837 21.5135 REMARK 3 T TENSOR REMARK 3 T11: 0.7346 T22: 0.7720 REMARK 3 T33: 1.9156 T12: 0.0056 REMARK 3 T13: -0.1320 T23: -0.3738 REMARK 3 L TENSOR REMARK 3 L11: 5.7730 L22: 6.7781 REMARK 3 L33: 5.9438 L12: -3.7398 REMARK 3 L13: -1.3897 L23: 3.3731 REMARK 3 S TENSOR REMARK 3 S11: -0.2515 S12: -0.0691 S13: 4.7337 REMARK 3 S21: 0.0592 S22: -0.2513 S23: 0.8262 REMARK 3 S31: -0.3372 S32: 0.0278 S33: -0.6048 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 61 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5111 29.0532 24.2631 REMARK 3 T TENSOR REMARK 3 T11: 0.9726 T22: 1.2051 REMARK 3 T33: 1.5716 T12: -0.1082 REMARK 3 T13: -0.2170 T23: -0.4461 REMARK 3 L TENSOR REMARK 3 L11: 4.1315 L22: 7.0075 REMARK 3 L33: 8.5070 L12: 0.6106 REMARK 3 L13: -3.4301 L23: -0.0027 REMARK 3 S TENSOR REMARK 3 S11: -0.7794 S12: -1.1596 S13: 3.7713 REMARK 3 S21: 0.1887 S22: -0.0319 S23: -0.3767 REMARK 3 S31: 0.9190 S32: -0.4054 S33: -0.3640 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 80 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.0433 25.7192 20.4288 REMARK 3 T TENSOR REMARK 3 T11: 0.7100 T22: 0.6641 REMARK 3 T33: 1.3553 T12: 0.0301 REMARK 3 T13: -0.1441 T23: -0.1513 REMARK 3 L TENSOR REMARK 3 L11: 3.8266 L22: 5.2953 REMARK 3 L33: 3.1436 L12: 0.4939 REMARK 3 L13: 1.6944 L23: 2.0466 REMARK 3 S TENSOR REMARK 3 S11: -0.2674 S12: -0.4337 S13: 1.9022 REMARK 3 S21: 0.2793 S22: 0.2990 S23: -0.7328 REMARK 3 S31: 0.1962 S32: 0.3145 S33: -0.1285 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 98 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.6105 16.2011 34.0649 REMARK 3 T TENSOR REMARK 3 T11: 1.7189 T22: 1.6416 REMARK 3 T33: 2.0484 T12: -0.3058 REMARK 3 T13: 0.1566 T23: -0.7370 REMARK 3 L TENSOR REMARK 3 L11: 0.1251 L22: 0.5262 REMARK 3 L33: 5.2471 L12: -0.2535 REMARK 3 L13: 0.8008 L23: -1.6766 REMARK 3 S TENSOR REMARK 3 S11: -1.9405 S12: -0.0060 S13: -0.8414 REMARK 3 S21: 1.7457 S22: 2.5020 S23: -4.0352 REMARK 3 S31: 1.8274 S32: -2.3835 S33: 0.4941 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 105 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.7079 24.1395 17.7073 REMARK 3 T TENSOR REMARK 3 T11: 0.7435 T22: 0.6883 REMARK 3 T33: 1.6012 T12: -0.0872 REMARK 3 T13: -0.1303 T23: -0.0900 REMARK 3 L TENSOR REMARK 3 L11: 2.4389 L22: 6.6075 REMARK 3 L33: 5.6982 L12: -1.5775 REMARK 3 L13: 0.8488 L23: 0.2933 REMARK 3 S TENSOR REMARK 3 S11: -0.2436 S12: 0.0318 S13: 2.2536 REMARK 3 S21: 0.2296 S22: -0.1071 S23: -1.6142 REMARK 3 S31: -0.5183 S32: 0.2867 S33: 0.3699 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6BDC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1000230695. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979, 1.075 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4577 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 43.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 41.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 21% PEG3350, 200MM SODIUM CITRATE, 10% REMARK 280 GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 6 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z REMARK 290 6555 X-Y,X,Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -84.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 SER A 2 REMARK 465 ALA A 126 REMARK 465 TRP A 127 REMARK 465 VAL A 128 REMARK 465 LEU A 129 REMARK 465 GLU A 130 REMARK 465 HIS A 131 REMARK 465 HIS A 132 REMARK 465 HIS A 133 REMARK 465 HIS A 134 REMARK 465 HIS A 135 REMARK 465 HIS A 136 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 4 CG CD1 CD2 REMARK 470 LYS A 12 CG CD CE NZ REMARK 470 LYS A 15 CG CD CE NZ REMARK 470 ASP A 28 CG OD1 OD2 REMARK 470 SER A 30 OG REMARK 470 ARG A 32 CG CD NE CZ NH1 NH2 REMARK 470 SER A 34 OG REMARK 470 VAL A 36 CG1 CG2 REMARK 470 ARG A 38 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 41 CZ NH1 NH2 REMARK 470 GLU A 53 CG CD OE1 OE2 REMARK 470 ASN A 60 CG OD1 ND2 REMARK 470 ASN A 61 CG OD1 ND2 REMARK 470 LYS A 70 CG CD CE NZ REMARK 470 ILE A 72 CG1 CG2 CD1 REMARK 470 LYS A 73 CG CD CE NZ REMARK 470 ARG A 74 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 75 CG OD1 OD2 REMARK 470 SER A 76 OG REMARK 470 ASN A 77 CG OD1 ND2 REMARK 470 LEU A 80 CG CD1 CD2 REMARK 470 LYS A 81 CG CD CE NZ REMARK 470 LYS A 84 CG CD CE NZ REMARK 470 TYR A 89 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 92 CG CD CE NZ REMARK 470 ASN A 100 CG OD1 ND2 REMARK 470 SER A 101 OG REMARK 470 GLU A 102 CG CD OE1 OE2 REMARK 470 ARG A 114 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 115 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 56 OG1 THR A 59 1.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 104 C - N - CD ANGL. DEV. = 12.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 29 -131.25 58.29 REMARK 500 THR A 35 170.82 82.99 REMARK 500 VAL A 36 150.83 88.79 REMARK 500 THR A 49 -162.90 54.16 REMARK 500 ASN A 61 -91.72 83.47 REMARK 500 GLU A 102 -128.25 55.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 78 THR A 79 140.15 REMARK 500 REMARK 500 REMARK: NULL DBREF 6BDC A 1 128 UNP A5FET8 A5FET8_FLAJ1 1 128 SEQADV 6BDC LEU A 129 UNP A5FET8 EXPRESSION TAG SEQADV 6BDC GLU A 130 UNP A5FET8 EXPRESSION TAG SEQADV 6BDC HIS A 131 UNP A5FET8 EXPRESSION TAG SEQADV 6BDC HIS A 132 UNP A5FET8 EXPRESSION TAG SEQADV 6BDC HIS A 133 UNP A5FET8 EXPRESSION TAG SEQADV 6BDC HIS A 134 UNP A5FET8 EXPRESSION TAG SEQADV 6BDC HIS A 135 UNP A5FET8 EXPRESSION TAG SEQADV 6BDC HIS A 136 UNP A5FET8 EXPRESSION TAG SEQRES 1 A 136 MSE SER PHE LEU THR SER LEU THR VAL ALA GLY LYS ASP SEQRES 2 A 136 TYR LYS VAL LEU ASN VAL SER TYR ASP LEU ALA GLN GLU SEQRES 3 A 136 THR ASP ALA SER GLY ARG PRO SER THR VAL THR ARG GLY SEQRES 4 A 136 GLY ARG ILE MSE ILE GLU VAL GLU SER THR GLY SER THR SEQRES 5 A 136 GLU LEU PHE GLU TRP MSE THR ASN ASN PHE GLU ARG LYS SEQRES 6 A 136 ASP GLY SER VAL LYS PHE ILE LYS ARG ASP SER ASN ALA SEQRES 7 A 136 THR LEU LYS GLU LEU LYS PHE THR GLU ALA TYR MSE VAL SEQRES 8 A 136 LYS TYR LYS GLU ASN PHE ASP HIS ASN SER GLU ASN PRO SEQRES 9 A 136 LEU THR GLU THR PHE MSE ILE SER ALA ARG LYS ILE SER SEQRES 10 A 136 MSE GLY GLY GLY GLU PHE ASP ASN ALA TRP VAL LEU GLU SEQRES 11 A 136 HIS HIS HIS HIS HIS HIS MODRES 6BDC MSE A 43 MET MODIFIED RESIDUE MODRES 6BDC MSE A 58 MET MODIFIED RESIDUE MODRES 6BDC MSE A 90 MET MODIFIED RESIDUE MODRES 6BDC MSE A 110 MET MODIFIED RESIDUE MODRES 6BDC MSE A 118 MET MODIFIED RESIDUE HET MSE A 43 8 HET MSE A 58 8 HET MSE A 90 8 HET MSE A 110 8 HET MSE A 118 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 5(C5 H11 N O2 SE) HELIX 1 AA1 THR A 52 ASN A 61 1 10 SHEET 1 AA1 8 GLY A 121 ASP A 124 0 SHEET 2 AA1 8 LEU A 105 MSE A 118 -1 N ILE A 116 O PHE A 123 SHEET 3 AA1 8 LYS A 81 PHE A 97 -1 N LYS A 94 O THR A 108 SHEET 4 AA1 8 ARG A 64 ILE A 72 -1 N VAL A 69 O LEU A 83 SHEET 5 AA1 8 LEU A 4 VAL A 9 -1 N LEU A 4 O ILE A 72 SHEET 6 AA1 8 LYS A 12 TYR A 21 -1 O LYS A 12 N VAL A 9 SHEET 7 AA1 8 ARG A 41 GLU A 47 -1 O MSE A 43 N SER A 20 SHEET 8 AA1 8 LEU A 105 MSE A 118 -1 O GLU A 107 N VAL A 46 LINK C ILE A 42 N MSE A 43 1555 1555 1.33 LINK C MSE A 43 N ILE A 44 1555 1555 1.34 LINK C TRP A 57 N MSE A 58 1555 1555 1.33 LINK C MSE A 58 N THR A 59 1555 1555 1.32 LINK C TYR A 89 N MSE A 90 1555 1555 1.33 LINK C MSE A 90 N VAL A 91 1555 1555 1.33 LINK C PHE A 109 N MSE A 110 1555 1555 1.33 LINK C MSE A 110 N ILE A 111 1555 1555 1.33 LINK C SER A 117 N MSE A 118 1555 1555 1.33 LINK C MSE A 118 N GLY A 119 1555 1555 1.33 CRYST1 79.021 79.021 82.913 90.00 90.00 120.00 P 6 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012655 0.007306 0.000000 0.00000 SCALE2 0.000000 0.014613 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012061 0.00000