data_6C4Q # _entry.id 6C4Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.289 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6C4Q WWPDB D_1000232060 # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id CSGID-IDP95506.9 _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6C4Q _pdbx_database_status.recvd_initial_deposition_date 2018-01-12 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Minasov, G.' 1 ? 'Shuvalova, L.' 2 ? 'Dubrovska, I.' 3 ? 'Kiryukhina, O.' 4 ? 'Grimshaw, S.' 5 ? 'Kwon, K.' 6 ? 'Anderson, W.F.' 7 ? 'Satchell, K.J.F.' 8 ? 'Joachimiak, A.' 9 ? 'Center for Structural Genomics of Infectious Diseases (CSGID)' 10 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;1.16 Angstrom Resolution Crystal Structure of Acyl Carrier Protein Domain (residues 1-100) of Polyketide Synthase Pks13 from Mycobacterium tuberculosis. ; _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Minasov, G.' 1 primary 'Shuvalova, L.' 2 primary 'Dubrovska, I.' 3 primary 'Kiryukhina, O.' 4 primary 'Grimshaw, S.' 5 primary 'Kwon, K.' 6 primary 'Anderson, W.F.' 7 primary 'Satchell, K.J.F.' 8 primary 'Joachimiak, A.' 9 primary 'Center for Structural Genomics of Infectious Diseases (CSGID)' 10 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6C4Q _cell.details ? _cell.formula_units_Z ? _cell.length_a 51.889 _cell.length_a_esd ? _cell.length_b 51.889 _cell.length_b_esd ? _cell.length_c 74.427 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6C4Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Polyketide synthase Pks13' 11156.786 1 ? ? 'residues 1-100' ? 2 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 water nat water 18.015 124 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNA(MSE)ADVAESQENAPAERAELTVPE(MSE)RQWLRNWVGKAVGKAPDSIDESVP(MSE)VELGLSSRDAVA(MSE) AADIEDLTGVTLSVAVAFAHPTIESLATRIIEGEPETDL ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMADVAESQENAPAERAELTVPEMRQWLRNWVGKAVGKAPDSIDESVPMVELGLSSRDAVAMAADIEDLTGVTLSVAV AFAHPTIESLATRIIEGEPETDL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier CSGID-IDP95506.9 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MSE n 1 5 ALA n 1 6 ASP n 1 7 VAL n 1 8 ALA n 1 9 GLU n 1 10 SER n 1 11 GLN n 1 12 GLU n 1 13 ASN n 1 14 ALA n 1 15 PRO n 1 16 ALA n 1 17 GLU n 1 18 ARG n 1 19 ALA n 1 20 GLU n 1 21 LEU n 1 22 THR n 1 23 VAL n 1 24 PRO n 1 25 GLU n 1 26 MSE n 1 27 ARG n 1 28 GLN n 1 29 TRP n 1 30 LEU n 1 31 ARG n 1 32 ASN n 1 33 TRP n 1 34 VAL n 1 35 GLY n 1 36 LYS n 1 37 ALA n 1 38 VAL n 1 39 GLY n 1 40 LYS n 1 41 ALA n 1 42 PRO n 1 43 ASP n 1 44 SER n 1 45 ILE n 1 46 ASP n 1 47 GLU n 1 48 SER n 1 49 VAL n 1 50 PRO n 1 51 MSE n 1 52 VAL n 1 53 GLU n 1 54 LEU n 1 55 GLY n 1 56 LEU n 1 57 SER n 1 58 SER n 1 59 ARG n 1 60 ASP n 1 61 ALA n 1 62 VAL n 1 63 ALA n 1 64 MSE n 1 65 ALA n 1 66 ALA n 1 67 ASP n 1 68 ILE n 1 69 GLU n 1 70 ASP n 1 71 LEU n 1 72 THR n 1 73 GLY n 1 74 VAL n 1 75 THR n 1 76 LEU n 1 77 SER n 1 78 VAL n 1 79 ALA n 1 80 VAL n 1 81 ALA n 1 82 PHE n 1 83 ALA n 1 84 HIS n 1 85 PRO n 1 86 THR n 1 87 ILE n 1 88 GLU n 1 89 SER n 1 90 LEU n 1 91 ALA n 1 92 THR n 1 93 ARG n 1 94 ILE n 1 95 ILE n 1 96 GLU n 1 97 GLY n 1 98 GLU n 1 99 PRO n 1 100 GLU n 1 101 THR n 1 102 ASP n 1 103 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 103 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'pks13, Rv3800c' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 25618 / H37Rv' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83332 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3) magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG53 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code I6X8D2_MYCTU _struct_ref.pdbx_db_accession I6X8D2 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MADVAESQENAPAERAELTVPEMRQWLRNWVGKAVGKAPDSIDESVPMVELGLSSRDAVAMAADIEDLTGVTLSVAVAFA HPTIESLATRIIEGEPETDL ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6C4Q _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 103 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession I6X8D2 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 100 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 100 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6C4Q SER A 1 ? UNP I6X8D2 ? ? 'expression tag' -2 1 1 6C4Q ASN A 2 ? UNP I6X8D2 ? ? 'expression tag' -1 2 1 6C4Q ALA A 3 ? UNP I6X8D2 ? ? 'expression tag' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6C4Q _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.23 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 44.8 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.3 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;Protein: 10.4 mg/ml, 0.5M Sodium chloride, 0.01M Tris pH 8.3; Screen: AmSO4 (H8) 3.0M Ammonium sulfate, 1% (w/v) MPD. Cryo: Screen + 25% Ethylene Glycol ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details 'C(111)' _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-10-17 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator Be _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97872 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-F' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97872 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-F _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 10.7 _reflns.entry_id 6C4Q _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.16 _reflns.d_resolution_low 30.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 35889 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.0 _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.5 _reflns.pdbx_Rmerge_I_obs 0.092 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.092 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 37.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 2.131 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.096 _reflns.pdbx_Rpim_I_all 0.028 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.16 _reflns_shell.d_res_low 1.18 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.8 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1749 _reflns_shell.percent_possible_all 100.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.808 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 9.4 _reflns_shell.pdbx_Rsym_value 0.808 _reflns_shell.pdbx_chi_squared 1.003 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.855 _reflns_shell.pdbx_Rpim_I_all 0.276 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.798 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.11 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] -0.11 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 0.23 _refine.B_iso_max ? _refine.B_iso_mean 16.387 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.976 _refine.correlation_coeff_Fo_to_Fc_free 0.973 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6C4Q _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.16 _refine.ls_d_res_low 26.13 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 34027 _refine.ls_number_reflns_R_free 1793 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.84 _refine.ls_percent_reflns_R_free 5.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.13029 _refine.ls_R_factor_R_free 0.14456 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.12952 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.027 _refine.pdbx_overall_ESU_R_Free 0.027 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 0.783 _refine.overall_SU_ML 0.016 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 634 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 124 _refine_hist.number_atoms_total 770 _refine_hist.d_res_high 1.16 _refine_hist.d_res_low 26.13 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 0.019 733 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 708 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.392 2.011 1005 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.847 3.000 1642 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 4.216 5.000 100 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 25.069 24.483 29 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 9.877 15.000 109 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 18.316 15.000 6 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.093 0.200 117 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.025 0.021 844 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.021 0.020 138 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 1.130 12.649 379 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.130 12.675 378 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 1.578 ? 486 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 1.577 ? 487 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 1.835 ? 354 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 1.834 ? 354 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 2.121 ? 520 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 2.892 ? 891 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 2.605 ? 861 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? 11.523 3.000 654 ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? 13.793 1.000 31 ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? 7.746 1.000 668 ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.160 _refine_ls_shell.d_res_low 1.190 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 142 _refine_ls_shell.number_reflns_R_work 2423 _refine_ls_shell.percent_reflns_obs 99.73 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.215 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.201 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6C4Q _struct.title ;1.16 Angstrom Resolution Crystal Structure of Acyl Carrier Protein Domain (residues 1-100) of Polyketide Synthase Pks13 from Mycobacterium tuberculosis ; _struct.pdbx_descriptor 'Adenosylhomocysteinase (E.C.3.3.1.1, 1.8.1.7)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6C4Q _struct_keywords.text 'Structural Genomics, Center for Structural Genomics of Infectious Diseases, CSGID, Acyl Carrier Protein, TRANSPORT PROTEIN' _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 14 ? ALA A 19 ? ALA A 11 ALA A 16 1 ? 6 HELX_P HELX_P2 AA2 THR A 22 ? GLY A 39 ? THR A 19 GLY A 36 1 ? 18 HELX_P HELX_P3 AA3 ALA A 41 ? ILE A 45 ? ALA A 38 ILE A 42 5 ? 5 HELX_P HELX_P4 AA4 PRO A 50 ? LEU A 54 ? PRO A 47 LEU A 51 5 ? 5 HELX_P HELX_P5 AA5 SER A 57 ? GLY A 73 ? SER A 54 GLY A 70 1 ? 17 HELX_P HELX_P6 AA6 SER A 77 ? HIS A 84 ? SER A 74 HIS A 81 1 ? 8 HELX_P HELX_P7 AA7 THR A 86 ? GLY A 97 ? THR A 83 GLY A 94 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A GLU 25 C A ? ? 1_555 A MSE 26 N ? ? A GLU 22 A MSE 23 1_555 ? ? ? ? ? ? ? 1.331 ? covale2 covale both ? A GLU 25 C B ? ? 1_555 A MSE 26 N ? ? A GLU 22 A MSE 23 1_555 ? ? ? ? ? ? ? 1.330 ? covale3 covale both ? A MSE 26 C ? ? ? 1_555 A ARG 27 N ? ? A MSE 23 A ARG 24 1_555 ? ? ? ? ? ? ? 1.337 ? covale4 covale both ? A PRO 50 C ? ? ? 1_555 A MSE 51 N A ? A PRO 47 A MSE 48 1_555 ? ? ? ? ? ? ? 1.330 ? covale5 covale both ? A PRO 50 C ? ? ? 1_555 A MSE 51 N B ? A PRO 47 A MSE 48 1_555 ? ? ? ? ? ? ? 1.327 ? covale6 covale both ? A MSE 51 C A ? ? 1_555 A VAL 52 N ? ? A MSE 48 A VAL 49 1_555 ? ? ? ? ? ? ? 1.339 ? covale7 covale both ? A MSE 51 C B ? ? 1_555 A VAL 52 N ? ? A MSE 48 A VAL 49 1_555 ? ? ? ? ? ? ? 1.342 ? covale8 covale both ? A ALA 63 C ? ? ? 1_555 A MSE 64 N A ? A ALA 60 A MSE 61 1_555 ? ? ? ? ? ? ? 1.331 ? covale9 covale both ? A ALA 63 C ? ? ? 1_555 A MSE 64 N B ? A ALA 60 A MSE 61 1_555 ? ? ? ? ? ? ? 1.328 ? covale10 covale both ? A MSE 64 C A ? ? 1_555 A ALA 65 N ? ? A MSE 61 A ALA 62 1_555 ? ? ? ? ? ? ? 1.334 ? covale11 covale both ? A MSE 64 C B ? ? 1_555 A ALA 65 N ? ? A MSE 61 A ALA 62 1_555 ? ? ? ? ? ? ? 1.333 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MPD 201 ? 8 'binding site for residue MPD A 201' AC2 Software A EDO 202 ? 8 'binding site for residue EDO A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 MSE A 51 ? MSE A 48 . ? 1_555 ? 2 AC1 8 VAL A 52 ? VAL A 49 . ? 1_555 ? 3 AC1 8 LEU A 56 ? LEU A 53 . ? 1_555 ? 4 AC1 8 ALA A 61 ? ALA A 58 . ? 1_555 ? 5 AC1 8 PHE A 82 ? PHE A 79 . ? 1_555 ? 6 AC1 8 EDO C . ? EDO A 202 . ? 1_555 ? 7 AC1 8 HOH D . ? HOH A 301 . ? 1_555 ? 8 AC1 8 HOH D . ? HOH A 389 . ? 1_555 ? 9 AC2 8 VAL A 52 ? VAL A 49 . ? 8_555 ? 10 AC2 8 VAL A 52 ? VAL A 49 . ? 1_555 ? 11 AC2 8 LEU A 56 ? LEU A 53 . ? 1_555 ? 12 AC2 8 PHE A 82 ? PHE A 79 . ? 8_555 ? 13 AC2 8 MPD B . ? MPD A 201 . ? 1_555 ? 14 AC2 8 HOH D . ? HOH A 303 . ? 1_555 ? 15 AC2 8 HOH D . ? HOH A 308 . ? 1_555 ? 16 AC2 8 HOH D . ? HOH A 330 . ? 1_555 ? # _atom_sites.entry_id 6C4Q _atom_sites.fract_transf_matrix[1][1] 0.019272 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019272 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013436 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 ? ? ? A . n A 1 3 ALA 3 0 ? ? ? A . n A 1 4 MSE 4 1 ? ? ? A . n A 1 5 ALA 5 2 ? ? ? A . n A 1 6 ASP 6 3 ? ? ? A . n A 1 7 VAL 7 4 ? ? ? A . n A 1 8 ALA 8 5 ? ? ? A . n A 1 9 GLU 9 6 ? ? ? A . n A 1 10 SER 10 7 ? ? ? A . n A 1 11 GLN 11 8 ? ? ? A . n A 1 12 GLU 12 9 ? ? ? A . n A 1 13 ASN 13 10 ? ? ? A . n A 1 14 ALA 14 11 11 ALA ALA A . n A 1 15 PRO 15 12 12 PRO PRO A . n A 1 16 ALA 16 13 13 ALA ALA A . n A 1 17 GLU 17 14 14 GLU GLU A . n A 1 18 ARG 18 15 15 ARG ARG A . n A 1 19 ALA 19 16 16 ALA ALA A . n A 1 20 GLU 20 17 17 GLU GLU A . n A 1 21 LEU 21 18 18 LEU LEU A . n A 1 22 THR 22 19 19 THR THR A . n A 1 23 VAL 23 20 20 VAL VAL A . n A 1 24 PRO 24 21 21 PRO PRO A . n A 1 25 GLU 25 22 22 GLU GLU A . n A 1 26 MSE 26 23 23 MSE MSE A . n A 1 27 ARG 27 24 24 ARG ARG A . n A 1 28 GLN 28 25 25 GLN GLN A . n A 1 29 TRP 29 26 26 TRP TRP A . n A 1 30 LEU 30 27 27 LEU LEU A . n A 1 31 ARG 31 28 28 ARG ARG A . n A 1 32 ASN 32 29 29 ASN ASN A . n A 1 33 TRP 33 30 30 TRP TRP A . n A 1 34 VAL 34 31 31 VAL VAL A . n A 1 35 GLY 35 32 32 GLY GLY A . n A 1 36 LYS 36 33 33 LYS LYS A . n A 1 37 ALA 37 34 34 ALA ALA A . n A 1 38 VAL 38 35 35 VAL VAL A . n A 1 39 GLY 39 36 36 GLY GLY A . n A 1 40 LYS 40 37 37 LYS LYS A . n A 1 41 ALA 41 38 38 ALA ALA A . n A 1 42 PRO 42 39 39 PRO PRO A . n A 1 43 ASP 43 40 40 ASP ASP A . n A 1 44 SER 44 41 41 SER SER A . n A 1 45 ILE 45 42 42 ILE ILE A . n A 1 46 ASP 46 43 43 ASP ASP A . n A 1 47 GLU 47 44 44 GLU GLU A . n A 1 48 SER 48 45 45 SER SER A . n A 1 49 VAL 49 46 46 VAL VAL A . n A 1 50 PRO 50 47 47 PRO PRO A . n A 1 51 MSE 51 48 48 MSE MSE A . n A 1 52 VAL 52 49 49 VAL VAL A . n A 1 53 GLU 53 50 50 GLU GLU A . n A 1 54 LEU 54 51 51 LEU LEU A . n A 1 55 GLY 55 52 52 GLY GLY A . n A 1 56 LEU 56 53 53 LEU LEU A . n A 1 57 SER 57 54 54 SER SER A . n A 1 58 SER 58 55 55 SER SER A . n A 1 59 ARG 59 56 56 ARG ARG A . n A 1 60 ASP 60 57 57 ASP ASP A . n A 1 61 ALA 61 58 58 ALA ALA A . n A 1 62 VAL 62 59 59 VAL VAL A . n A 1 63 ALA 63 60 60 ALA ALA A . n A 1 64 MSE 64 61 61 MSE MSE A . n A 1 65 ALA 65 62 62 ALA ALA A . n A 1 66 ALA 66 63 63 ALA ALA A . n A 1 67 ASP 67 64 64 ASP ASP A . n A 1 68 ILE 68 65 65 ILE ILE A . n A 1 69 GLU 69 66 66 GLU GLU A . n A 1 70 ASP 70 67 67 ASP ASP A . n A 1 71 LEU 71 68 68 LEU LEU A . n A 1 72 THR 72 69 69 THR THR A . n A 1 73 GLY 73 70 70 GLY GLY A . n A 1 74 VAL 74 71 71 VAL VAL A . n A 1 75 THR 75 72 72 THR THR A . n A 1 76 LEU 76 73 73 LEU LEU A . n A 1 77 SER 77 74 74 SER SER A . n A 1 78 VAL 78 75 75 VAL VAL A . n A 1 79 ALA 79 76 76 ALA ALA A . n A 1 80 VAL 80 77 77 VAL VAL A . n A 1 81 ALA 81 78 78 ALA ALA A . n A 1 82 PHE 82 79 79 PHE PHE A . n A 1 83 ALA 83 80 80 ALA ALA A . n A 1 84 HIS 84 81 81 HIS HIS A . n A 1 85 PRO 85 82 82 PRO PRO A . n A 1 86 THR 86 83 83 THR THR A . n A 1 87 ILE 87 84 84 ILE ILE A . n A 1 88 GLU 88 85 85 GLU GLU A . n A 1 89 SER 89 86 86 SER SER A . n A 1 90 LEU 90 87 87 LEU LEU A . n A 1 91 ALA 91 88 88 ALA ALA A . n A 1 92 THR 92 89 89 THR THR A . n A 1 93 ARG 93 90 90 ARG ARG A . n A 1 94 ILE 94 91 91 ILE ILE A . n A 1 95 ILE 95 92 92 ILE ILE A . n A 1 96 GLU 96 93 93 GLU GLU A . n A 1 97 GLY 97 94 94 GLY GLY A . n A 1 98 GLU 98 95 95 GLU GLU A . n A 1 99 PRO 99 96 ? ? ? A . n A 1 100 GLU 100 97 ? ? ? A . n A 1 101 THR 101 98 ? ? ? A . n A 1 102 ASP 102 99 ? ? ? A . n A 1 103 LEU 103 100 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NIAID, National Institute of Allergy and Infectious Diseases' _pdbx_SG_project.full_name_of_center 'Center for Structural Genomics of Infectious Diseases' _pdbx_SG_project.initial_of_center CSGID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MPD 1 201 1 MPD MPD A . C 3 EDO 1 202 2 EDO EDO A . D 4 HOH 1 301 124 HOH HOH A . D 4 HOH 2 302 30 HOH HOH A . D 4 HOH 3 303 12 HOH HOH A . D 4 HOH 4 304 41 HOH HOH A . D 4 HOH 5 305 122 HOH HOH A . D 4 HOH 6 306 60 HOH HOH A . D 4 HOH 7 307 47 HOH HOH A . D 4 HOH 8 308 24 HOH HOH A . D 4 HOH 9 309 89 HOH HOH A . D 4 HOH 10 310 5 HOH HOH A . D 4 HOH 11 311 36 HOH HOH A . D 4 HOH 12 312 46 HOH HOH A . D 4 HOH 13 313 71 HOH HOH A . D 4 HOH 14 314 34 HOH HOH A . D 4 HOH 15 315 87 HOH HOH A . D 4 HOH 16 316 26 HOH HOH A . D 4 HOH 17 317 28 HOH HOH A . D 4 HOH 18 318 22 HOH HOH A . D 4 HOH 19 319 59 HOH HOH A . D 4 HOH 20 320 69 HOH HOH A . D 4 HOH 21 321 98 HOH HOH A . D 4 HOH 22 322 62 HOH HOH A . D 4 HOH 23 323 52 HOH HOH A . D 4 HOH 24 324 33 HOH HOH A . D 4 HOH 25 325 31 HOH HOH A . D 4 HOH 26 326 44 HOH HOH A . D 4 HOH 27 327 88 HOH HOH A . D 4 HOH 28 328 27 HOH HOH A . D 4 HOH 29 329 45 HOH HOH A . D 4 HOH 30 330 66 HOH HOH A . D 4 HOH 31 331 3 HOH HOH A . D 4 HOH 32 332 79 HOH HOH A . D 4 HOH 33 333 48 HOH HOH A . D 4 HOH 34 334 4 HOH HOH A . D 4 HOH 35 335 50 HOH HOH A . D 4 HOH 36 336 8 HOH HOH A . D 4 HOH 37 337 61 HOH HOH A . D 4 HOH 38 338 102 HOH HOH A . D 4 HOH 39 339 17 HOH HOH A . D 4 HOH 40 340 85 HOH HOH A . D 4 HOH 41 341 63 HOH HOH A . D 4 HOH 42 342 40 HOH HOH A . D 4 HOH 43 343 53 HOH HOH A . D 4 HOH 44 344 72 HOH HOH A . D 4 HOH 45 345 29 HOH HOH A . D 4 HOH 46 346 43 HOH HOH A . D 4 HOH 47 347 11 HOH HOH A . D 4 HOH 48 348 10 HOH HOH A . D 4 HOH 49 349 14 HOH HOH A . D 4 HOH 50 350 37 HOH HOH A . D 4 HOH 51 351 75 HOH HOH A . D 4 HOH 52 352 68 HOH HOH A . D 4 HOH 53 353 76 HOH HOH A . D 4 HOH 54 354 20 HOH HOH A . D 4 HOH 55 355 73 HOH HOH A . D 4 HOH 56 356 103 HOH HOH A . D 4 HOH 57 357 86 HOH HOH A . D 4 HOH 58 358 67 HOH HOH A . D 4 HOH 59 359 6 HOH HOH A . D 4 HOH 60 360 39 HOH HOH A . D 4 HOH 61 361 23 HOH HOH A . D 4 HOH 62 362 70 HOH HOH A . D 4 HOH 63 363 38 HOH HOH A . D 4 HOH 64 364 16 HOH HOH A . D 4 HOH 65 365 78 HOH HOH A . D 4 HOH 66 366 9 HOH HOH A . D 4 HOH 67 367 57 HOH HOH A . D 4 HOH 68 368 51 HOH HOH A . D 4 HOH 69 369 32 HOH HOH A . D 4 HOH 70 370 97 HOH HOH A . D 4 HOH 71 371 56 HOH HOH A . D 4 HOH 72 372 42 HOH HOH A . D 4 HOH 73 373 65 HOH HOH A . D 4 HOH 74 374 18 HOH HOH A . D 4 HOH 75 375 119 HOH HOH A . D 4 HOH 76 376 13 HOH HOH A . D 4 HOH 77 377 25 HOH HOH A . D 4 HOH 78 378 54 HOH HOH A . D 4 HOH 79 379 49 HOH HOH A . D 4 HOH 80 380 84 HOH HOH A . D 4 HOH 81 381 58 HOH HOH A . D 4 HOH 82 382 19 HOH HOH A . D 4 HOH 83 383 21 HOH HOH A . D 4 HOH 84 384 121 HOH HOH A . D 4 HOH 85 385 108 HOH HOH A . D 4 HOH 86 386 126 HOH HOH A . D 4 HOH 87 387 120 HOH HOH A . D 4 HOH 88 388 92 HOH HOH A . D 4 HOH 89 389 7 HOH HOH A . D 4 HOH 90 390 15 HOH HOH A . D 4 HOH 91 391 77 HOH HOH A . D 4 HOH 92 392 104 HOH HOH A . D 4 HOH 93 393 83 HOH HOH A . D 4 HOH 94 394 99 HOH HOH A . D 4 HOH 95 395 115 HOH HOH A . D 4 HOH 96 396 107 HOH HOH A . D 4 HOH 97 397 114 HOH HOH A . D 4 HOH 98 398 117 HOH HOH A . D 4 HOH 99 399 91 HOH HOH A . D 4 HOH 100 400 74 HOH HOH A . D 4 HOH 101 401 125 HOH HOH A . D 4 HOH 102 402 55 HOH HOH A . D 4 HOH 103 403 64 HOH HOH A . D 4 HOH 104 404 93 HOH HOH A . D 4 HOH 105 405 100 HOH HOH A . D 4 HOH 106 406 123 HOH HOH A . D 4 HOH 107 407 105 HOH HOH A . D 4 HOH 108 408 81 HOH HOH A . D 4 HOH 109 409 82 HOH HOH A . D 4 HOH 110 410 106 HOH HOH A . D 4 HOH 111 411 96 HOH HOH A . D 4 HOH 112 412 35 HOH HOH A . D 4 HOH 113 413 116 HOH HOH A . D 4 HOH 114 414 110 HOH HOH A . D 4 HOH 115 415 101 HOH HOH A . D 4 HOH 116 416 109 HOH HOH A . D 4 HOH 117 417 95 HOH HOH A . D 4 HOH 118 418 94 HOH HOH A . D 4 HOH 119 419 90 HOH HOH A . D 4 HOH 120 420 80 HOH HOH A . D 4 HOH 121 421 111 HOH HOH A . D 4 HOH 122 422 112 HOH HOH A . D 4 HOH 123 423 113 HOH HOH A . D 4 HOH 124 424 118 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 26 A MSE 23 ? MET 'modified residue' 2 A MSE 51 A MSE 48 ? MET 'modified residue' 3 A MSE 64 A MSE 61 ? MET 'modified residue' # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D 2 1,2 A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 2560 ? 2 MORE -39 ? 2 'SSA (A^2)' 9240 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 37.2135000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2018-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 16.3680 21.8926 9.5442 0.1310 0.1036 0.1530 -0.0430 0.0035 -0.0550 10.7393 11.3472 10.3031 -6.2589 -3.3137 -3.6244 -0.3865 -0.3742 0.6633 0.0391 0.1668 -1.1632 -0.5021 0.6403 0.2198 'X-RAY DIFFRACTION' 2 ? refined -5.8551 26.0523 8.0316 0.0175 0.0198 0.0014 -0.0010 0.0006 -0.0005 0.7370 0.1554 0.2822 -0.0323 0.2791 0.1329 -0.0192 0.0261 0.0097 -0.0156 0.0076 0.0012 -0.0211 0.0027 0.0116 'X-RAY DIFFRACTION' 3 ? refined -10.7139 19.9867 14.4290 0.0160 0.0199 0.0002 -0.0005 -0.0001 0.0001 0.0098 0.0967 0.1331 0.0277 0.0163 0.0743 0.0010 0.0042 -0.0001 0.0053 -0.0040 0.0000 -0.0061 -0.0059 0.0030 'X-RAY DIFFRACTION' 4 ? refined 0.6352 19.3468 19.8928 0.0260 0.0266 0.0036 0.0093 -0.0001 0.0088 3.8993 1.5353 1.3222 0.2270 -0.9064 1.2469 0.0014 -0.1387 -0.0723 0.1103 -0.0148 -0.0099 0.0983 0.0325 0.0134 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 11 ? ? A 16 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 17 ? ? A 40 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 41 ? ? A 88 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 89 ? ? A 95 ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0189 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 MPD _pdbx_validate_close_contact.auth_seq_id_1 201 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 301 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A ASN -1 ? A ASN 2 3 1 Y 1 A ALA 0 ? A ALA 3 4 1 Y 1 A MSE 1 ? A MSE 4 5 1 Y 1 A ALA 2 ? A ALA 5 6 1 Y 1 A ASP 3 ? A ASP 6 7 1 Y 1 A VAL 4 ? A VAL 7 8 1 Y 1 A ALA 5 ? A ALA 8 9 1 Y 1 A GLU 6 ? A GLU 9 10 1 Y 1 A SER 7 ? A SER 10 11 1 Y 1 A GLN 8 ? A GLN 11 12 1 Y 1 A GLU 9 ? A GLU 12 13 1 Y 1 A ASN 10 ? A ASN 13 14 1 Y 1 A PRO 96 ? A PRO 99 15 1 Y 1 A GLU 97 ? A GLU 100 16 1 Y 1 A THR 98 ? A THR 101 17 1 Y 1 A ASP 99 ? A ASP 102 18 1 Y 1 A LEU 100 ? A LEU 103 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 3 1,2-ETHANEDIOL EDO 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #