data_6CRO # _entry.id 6CRO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6CRO pdb_00006cro 10.2210/pdb6cro/pdb RCSB PDR053 ? ? WWPDB D_1000179810 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-09-18 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-11-29 5 'Structure model' 1 4 2024-03-13 6 'Structure model' 1 5 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Derived calculations' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' struct_conf 2 4 'Structure model' struct_conf_type 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' database_2 6 5 'Structure model' struct_site 7 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 6CRO _pdbx_database_status.recvd_initial_deposition_date 1998-04-22 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Albright, R.A.' 1 'Matthews, B.W.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal structure of lambda-Cro bound to a consensus operator at 3.0 A resolution.' J.Mol.Biol. 280 137 151 1998 JMOBAK UK 0022-2836 0070 ? 9653037 10.1006/jmbi.1998.1848 1 ;Crystal Structure of an Engineered Cro Monomer Bound Nonspecifically to DNA: Possible Implications for Nonspecific Binding by the Wild-Type Protein ; 'Protein Sci.' 7 1485 1494 1998 PRCIEI US 0961-8368 0795 ? ? ? 2 'Refined Structure of Cro Repressor Protein from Bacteriophage Lambda Suggests Both Flexibility and Plasticity' J.Mol.Biol. 280 129 ? 1998 JMOBAK UK 0022-2836 0070 ? ? ? 3 'How Cro and Lambda-Repressor Distinguish between Operators: The Structural Basis Underlying a Genetic Switch' Proc.Natl.Acad.Sci.USA 95 3431 ? 1998 PNASA6 US 0027-8424 0040 ? ? ? 4 'Protein-DNA Conformational Changes in the Crystal Structure of a Lambda Cro- Operator Complex' Proc.Natl.Acad.Sci.USA 87 8165 ? 1990 PNASA6 US 0027-8424 0040 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Albright, R.A.' 1 ? primary 'Matthews, B.W.' 2 ? 1 'Albright, R.A.' 3 ? 1 'Mossing, M.C.' 4 ? 1 'Matthews, B.W.' 5 ? 2 'Ohlendorf, D.H.' 6 ? 2 'Tronrud, D.E.' 7 ? 2 'Matthews, B.W.' 8 ? 3 'Albright, R.A.' 9 ? 3 'Matthews, B.W.' 10 ? 4 'Brennan, R.G.' 11 ? 4 'Roderick, S.L.' 12 ? 4 'Takeda, Y.' 13 ? 4 'Matthews, B.W.' 14 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*AP*CP*TP*AP*TP*CP*AP*CP*CP*GP*CP*GP*GP*GP*TP*GP*AP*TP*AP*C)-3') ; 6118.968 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*TP*GP*TP*AP*TP*CP*AP*CP*CP*CP*GP*CP*GP*GP*TP*GP*AP*TP*AP*G)-3') ; 6149.979 1 ? ? ? ? 3 polymer man 'LAMBDA CRO REPRESSOR' 6712.643 1 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 5 water nat water 18.015 7 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'LAMBDA CRO REPRESSOR' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DC)(DT)(DA)(DT)(DC)(DA)(DC)(DC)(DG)(DC)(DG)(DG)(DG)(DT)(DG)(DA)(DT)(DA)(DC)' ACTATCACCGCGGGTGATAC R ? 2 polydeoxyribonucleotide no no '(DT)(DG)(DT)(DA)(DT)(DC)(DA)(DC)(DC)(DC)(DG)(DC)(DG)(DG)(DT)(DG)(DA)(DT)(DA)(DG)' TGTATCACCCGCGGTGATAG U ? 3 'polypeptide(L)' no no EQRITLKDYAMRFGQTKTAKDLGVYQSAINKAIHAGRKIFLTINADGSVYAEEVKPFPSN EQRITLKDYAMRFGQTKTAKDLGVYQSAINKAIHAGRKIFLTINADGSVYAEEVKPFPSN A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'SULFATE ION' SO4 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DC n 1 3 DT n 1 4 DA n 1 5 DT n 1 6 DC n 1 7 DA n 1 8 DC n 1 9 DC n 1 10 DG n 1 11 DC n 1 12 DG n 1 13 DG n 1 14 DG n 1 15 DT n 1 16 DG n 1 17 DA n 1 18 DT n 1 19 DA n 1 20 DC n 2 1 DT n 2 2 DG n 2 3 DT n 2 4 DA n 2 5 DT n 2 6 DC n 2 7 DA n 2 8 DC n 2 9 DC n 2 10 DC n 2 11 DG n 2 12 DC n 2 13 DG n 2 14 DG n 2 15 DT n 2 16 DG n 2 17 DA n 2 18 DT n 2 19 DA n 2 20 DG n 3 1 GLU n 3 2 GLN n 3 3 ARG n 3 4 ILE n 3 5 THR n 3 6 LEU n 3 7 LYS n 3 8 ASP n 3 9 TYR n 3 10 ALA n 3 11 MET n 3 12 ARG n 3 13 PHE n 3 14 GLY n 3 15 GLN n 3 16 THR n 3 17 LYS n 3 18 THR n 3 19 ALA n 3 20 LYS n 3 21 ASP n 3 22 LEU n 3 23 GLY n 3 24 VAL n 3 25 TYR n 3 26 GLN n 3 27 SER n 3 28 ALA n 3 29 ILE n 3 30 ASN n 3 31 LYS n 3 32 ALA n 3 33 ILE n 3 34 HIS n 3 35 ALA n 3 36 GLY n 3 37 ARG n 3 38 LYS n 3 39 ILE n 3 40 PHE n 3 41 LEU n 3 42 THR n 3 43 ILE n 3 44 ASN n 3 45 ALA n 3 46 ASP n 3 47 GLY n 3 48 SER n 3 49 VAL n 3 50 TYR n 3 51 ALA n 3 52 GLU n 3 53 GLU n 3 54 VAL n 3 55 LYS n 3 56 PRO n 3 57 PHE n 3 58 PRO n 3 59 SER n 3 60 ASN n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus 'Lambda-like viruses' _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterobacteria phage lambda' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10710 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA A R . n A 1 2 DC 2 2 2 DC C R . n A 1 3 DT 3 3 3 DT T R . n A 1 4 DA 4 4 4 DA A R . n A 1 5 DT 5 5 5 DT T R . n A 1 6 DC 6 6 6 DC C R . n A 1 7 DA 7 7 7 DA A R . n A 1 8 DC 8 8 8 DC C R . n A 1 9 DC 9 9 9 DC C R . n A 1 10 DG 10 10 10 DG G R . n A 1 11 DC 11 11 11 DC C R . n A 1 12 DG 12 12 12 DG G R . n A 1 13 DG 13 13 13 DG G R . n A 1 14 DG 14 14 14 DG G R . n A 1 15 DT 15 15 15 DT T R . n A 1 16 DG 16 16 16 DG G R . n A 1 17 DA 17 17 17 DA A R . n A 1 18 DT 18 18 18 DT T R . n A 1 19 DA 19 19 19 DA A R . n A 1 20 DC 20 20 20 DC C R . n B 2 1 DT 1 1 1 DT T U . n B 2 2 DG 2 2 2 DG G U . n B 2 3 DT 3 3 3 DT T U . n B 2 4 DA 4 4 4 DA A U . n B 2 5 DT 5 5 5 DT T U . n B 2 6 DC 6 6 6 DC C U . n B 2 7 DA 7 7 7 DA A U . n B 2 8 DC 8 8 8 DC C U . n B 2 9 DC 9 9 9 DC C U . n B 2 10 DC 10 10 10 DC C U . n B 2 11 DG 11 11 11 DG G U . n B 2 12 DC 12 12 12 DC C U . n B 2 13 DG 13 13 13 DG G U . n B 2 14 DG 14 14 14 DG G U . n B 2 15 DT 15 15 15 DT T U . n B 2 16 DG 16 16 16 DG G U . n B 2 17 DA 17 17 17 DA A U . n B 2 18 DT 18 18 18 DT T U . n B 2 19 DA 19 19 19 DA A U . n B 2 20 DG 20 20 20 DG G U . n C 3 1 GLU 1 2 2 GLU GLU A . n C 3 2 GLN 2 3 3 GLN GLN A . n C 3 3 ARG 3 4 4 ARG ARG A . n C 3 4 ILE 4 5 5 ILE ILE A . n C 3 5 THR 5 6 6 THR THR A . n C 3 6 LEU 6 7 7 LEU LEU A . n C 3 7 LYS 7 8 8 LYS LYS A . n C 3 8 ASP 8 9 9 ASP ASP A . n C 3 9 TYR 9 10 10 TYR TYR A . n C 3 10 ALA 10 11 11 ALA ALA A . n C 3 11 MET 11 12 12 MET MET A . n C 3 12 ARG 12 13 13 ARG ARG A . n C 3 13 PHE 13 14 14 PHE PHE A . n C 3 14 GLY 14 15 15 GLY GLY A . n C 3 15 GLN 15 16 16 GLN GLN A . n C 3 16 THR 16 17 17 THR THR A . n C 3 17 LYS 17 18 18 LYS LYS A . n C 3 18 THR 18 19 19 THR THR A . n C 3 19 ALA 19 20 20 ALA ALA A . n C 3 20 LYS 20 21 21 LYS LYS A . n C 3 21 ASP 21 22 22 ASP ASP A . n C 3 22 LEU 22 23 23 LEU LEU A . n C 3 23 GLY 23 24 24 GLY GLY A . n C 3 24 VAL 24 25 25 VAL VAL A . n C 3 25 TYR 25 26 26 TYR TYR A . n C 3 26 GLN 26 27 27 GLN GLN A . n C 3 27 SER 27 28 28 SER SER A . n C 3 28 ALA 28 29 29 ALA ALA A . n C 3 29 ILE 29 30 30 ILE ILE A . n C 3 30 ASN 30 31 31 ASN ASN A . n C 3 31 LYS 31 32 32 LYS LYS A . n C 3 32 ALA 32 33 33 ALA ALA A . n C 3 33 ILE 33 34 34 ILE ILE A . n C 3 34 HIS 34 35 35 HIS HIS A . n C 3 35 ALA 35 36 36 ALA ALA A . n C 3 36 GLY 36 37 37 GLY GLY A . n C 3 37 ARG 37 38 38 ARG ARG A . n C 3 38 LYS 38 39 39 LYS LYS A . n C 3 39 ILE 39 40 40 ILE ILE A . n C 3 40 PHE 40 41 41 PHE PHE A . n C 3 41 LEU 41 42 42 LEU LEU A . n C 3 42 THR 42 43 43 THR THR A . n C 3 43 ILE 43 44 44 ILE ILE A . n C 3 44 ASN 44 45 45 ASN ASN A . n C 3 45 ALA 45 46 46 ALA ALA A . n C 3 46 ASP 46 47 47 ASP ASP A . n C 3 47 GLY 47 48 48 GLY GLY A . n C 3 48 SER 48 49 49 SER SER A . n C 3 49 VAL 49 50 50 VAL VAL A . n C 3 50 TYR 50 51 51 TYR TYR A . n C 3 51 ALA 51 52 52 ALA ALA A . n C 3 52 GLU 52 53 53 GLU GLU A . n C 3 53 GLU 53 54 54 GLU GLU A . n C 3 54 VAL 54 55 55 VAL VAL A . n C 3 55 LYS 55 56 56 LYS LYS A . n C 3 56 PRO 56 57 57 PRO PRO A . n C 3 57 PHE 57 58 58 PHE PHE A . n C 3 58 PRO 58 59 59 PRO PRO A . n C 3 59 SER 59 60 60 SER SER A . n C 3 60 ASN 60 61 61 ASN ASN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 SO4 1 400 400 SO4 SO4 A . E 5 HOH 1 106 106 HOH HOH U . E 5 HOH 2 107 107 HOH HOH U . F 5 HOH 1 101 101 HOH HOH A . F 5 HOH 2 102 102 HOH HOH A . F 5 HOH 3 103 103 HOH HOH A . F 5 HOH 4 104 104 HOH HOH A . F 5 HOH 5 105 105 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal VERIFY 'model building' '(RODERICK)' ? 1 EDPDB 'model building' '(ZHANG)' ? 2 TNT refinement 5EB ? 3 SDMS 'data reduction' . ? 4 SDMS 'data scaling' . ? 5 VERIFY phasing '(RODERICK)' ? 6 EDPDB phasing '(ZHANG)' ? 7 # _cell.entry_id 6CRO _cell.length_a 102.970 _cell.length_b 102.970 _cell.length_c 102.970 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 6CRO _symmetry.space_group_name_H-M 'I 21 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting cubic _symmetry.Int_Tables_number 199 _symmetry.space_group_name_Hall ? # _exptl.entry_id 6CRO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.3 _exptl_crystal.density_percent_sol 47.33 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.9 _exptl_crystal_grow.pdbx_details ;CRO PROTEIN WAS SUSPENDED IN 20MM SODIUM CACODYLATE PH6.9 THEN MIXED WITH A 30% EXCESS OF THE 19BP DNA FRAGMENT. THE COMPLEX WAS THEN MIXED WITH AN EQUAL VOLUME OF PRECIPITANT SOLUTION (70MM AMMONIUM SULFATE, 13% PEG3350) AND ALLOWED TO EQUILIBRATE VIA THE HANGING DROP METHOD AT ROOM TEMPERATURE. COCRYSTALS TYPICALLY TAKE 3-4 MONTHS TO APPEAR., vapor diffusion - hanging drop, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'SODIUM CACODYLATE' ? ? ? 1 2 1 '(NH4)2SO4' ? ? ? 1 3 1 'PEG 3350' ? ? ? 1 4 2 '(NH4)2SO4' ? ? ? 1 5 2 'PEG 3350' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 295 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type SDMS _diffrn_detector.pdbx_collection_date 1993-02-15 _diffrn_detector.details COLLIMATOR # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'GRAPHITE CRYSTAL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 6CRO _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 3.0 _reflns.number_obs 3758 _reflns.number_all 3758 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.0720000 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 40.8 _reflns.pdbx_redundancy 17.7 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.0 _reflns_shell.d_res_low ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 6CRO _refine.ls_number_reflns_obs 3758 _refine.ls_number_reflns_all 3758 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.0 _refine.ls_d_res_high 3.0 _refine.ls_percent_reflns_obs 99.9 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1940000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details BABINET _refine.solvent_model_param_ksol 0.50 _refine.solvent_model_param_bsol 160 _refine.pdbx_ls_cross_valid_method ? _refine.details ;THIS MODEL UNDERWENT ONE FINAL ROUND OF REFINEMENT AFTER THE MANUSCRIPT WAS SUBMITTED. THE PSEUDO-DYAD OF THE COMPLEX IS COINCIDENT WITH A CRYSTALLOGRAPHIC TWO-FOLD AXIS, SUCH THAT THE COMPLEX IS EVENLY-DISTRIBUTED BETWEEN TWO ORIENTATIONS RELATED BY A 180-DEGREE ROTATION. THE SPACE GROUP IS I 21 3 WITH A SINGLE CRO SUBUNIT AND AN "AVERAGED" DNA HALF-FRAGMENT PER ASU. THIS AVERAGING AFFECTED ONLY THOSE BP IDENTITIES WHERE THE SEQUENCE PALINDROME BREAKS DOWN, WHICH OCCURS ONLY IN REGIONS NOT CONTACTED BY CRO. THE PROTEIN, DNA BACKBONE, AND THOSE BPS DIRECTLY CONTACTED BY CRO ARE EVERYWHERE "NORMAL". THE AVERAGED BASES CONSISTED OF THE TWO COMPONENT BASES AT A GIVEN POSITION, EACH BONDED TO THE SAME RIBOSE, BUT ALLOWED TO IGNORE THE PRESENCE OF EACH OTHER DURING REFINEMENT. ; _refine.pdbx_starting_model 'TRUNCATED VERSION OF THE PREVIOUS LOW-RESOLUTION COMPLEX STRUCTURE' _refine.pdbx_method_to_determine_struct 'MIR, WITH SUBSEQUENT MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'TNT PROTGEO & NUCLGEO ISOTROPIC THERMAL FACTOR RESTRAINTS: TNT BCORREL (MODIFIED TO INCLUDE DNA)' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 472 _refine_hist.pdbx_number_atoms_nucleic_acid 814 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 7 _refine_hist.number_atoms_total 1298 _refine_hist.d_res_high 3.0 _refine_hist.d_res_low 20.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.014 ? 1.60 1006 'X-RAY DIFFRACTION' ? t_angle_deg 2.587 ? 2.30 1456 'X-RAY DIFFRACTION' ? t_dihedral_angle_d 23.244 ? 0.20 531 'X-RAY DIFFRACTION' ? t_incorr_chiral_ct 0 ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes 0.011 ? 2.20 12 'X-RAY DIFFRACTION' ? t_gen_planes 0.016 ? 6.60 95 'X-RAY DIFFRACTION' ? t_it 1.811 ? 34.00 1058 'X-RAY DIFFRACTION' ? t_nbd 0.033 ? 10.00 51 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 6CRO _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff 0.1940000 _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff ? _pdbx_refine.number_reflns_obs_no_cutoff ? _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _database_PDB_matrix.entry_id 6CRO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 6CRO _struct.title 'CRYSTAL STRUCTURE OF LAMBDA-CRO BOUND TO A CONSENSUS OPERATOR AT 3.0 ANGSTROM RESOLUTION' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 6CRO _struct_keywords.pdbx_keywords 'GENE REGULATION/DNA' _struct_keywords.text ;COMPLEX (TRANSCRIPTION REGULATION-DNA), CRO, BACTERIOPHAGE LAMBDA, CONFORMATIONAL CHANGE, REPRESSOR, HELIX-TURN-HELIX, GENE REGULATION-DNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP RCRO_LAMBD P03040 3 2 ? ? 2 PDB 6CRO 6CRO 1 ? ? ? 3 PDB 6CRO 6CRO 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6CRO A 1 ? 60 ? P03040 2 ? 61 ? 2 61 2 2 6CRO R 1 ? 20 ? 6CRO 1 ? 20 ? 1 20 3 3 6CRO U 1 ? 20 ? 6CRO 1 ? 20 ? 1 20 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 16_566 x,-y+1,-z+3/2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 102.9700000000 0.0000000000 0.0000000000 -1.0000000000 154.4550000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU C 6 ? PHE C 13 ? LEU A 7 PHE A 14 1 ? 8 HELX_P HELX_P2 2 GLN C 15 ? LEU C 22 ? GLN A 16 LEU A 23 1 ? 8 HELX_P HELX_P3 3 GLN C 26 ? ALA C 35 ? GLN A 27 ALA A 36 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 20 N1 ? ? R DC 2 U DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 20 O6 ? ? R DC 2 U DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 20 N2 ? ? R DC 2 U DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 3 N3 ? ? ? 1_555 A DA 19 N1 ? ? R DT 3 R DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 3 O4 ? ? ? 1_555 A DA 19 N6 ? ? R DT 3 R DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 19 N1 ? ? R DT 3 U DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 19 N6 ? ? R DT 3 U DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 4 N1 ? ? ? 1_555 A DT 18 N3 ? ? R DA 4 R DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 4 N6 ? ? ? 1_555 A DT 18 O4 ? ? R DA 4 R DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 18 N3 ? ? R DA 4 U DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 18 O4 ? ? R DA 4 U DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 5 N3 ? ? ? 1_555 A DA 17 N1 ? ? R DT 5 R DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 5 O4 ? ? ? 1_555 A DA 17 N6 ? ? R DT 5 R DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 17 N1 ? ? R DT 5 U DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 17 N6 ? ? R DT 5 U DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 N3 ? ? ? 1_555 A DG 16 N1 ? ? R DC 6 R DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 6 N4 ? ? ? 1_555 A DG 16 O6 ? ? R DC 6 R DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 6 O2 ? ? ? 1_555 A DG 16 N2 ? ? R DC 6 R DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 16 N1 ? ? R DC 6 U DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 16 O6 ? ? R DC 6 U DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 16 N2 ? ? R DC 6 U DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DA 7 N1 ? ? ? 1_555 A DT 15 N3 ? ? R DA 7 R DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DA 7 N6 ? ? ? 1_555 A DT 15 O4 ? ? R DA 7 R DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 15 N3 ? ? R DA 7 U DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 15 O4 ? ? R DA 7 U DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 8 N3 ? ? ? 1_555 A DG 14 N1 ? ? R DC 8 R DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 8 N4 ? ? ? 1_555 A DG 14 O6 ? ? R DC 8 R DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 8 O2 ? ? ? 1_555 A DG 14 N2 ? ? R DC 8 R DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 14 N1 ? ? R DC 8 U DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 14 O6 ? ? R DC 8 U DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 14 N2 ? ? R DC 8 U DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DC 9 N3 ? ? ? 1_555 A DG 13 N1 ? ? R DC 9 R DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DC 9 N4 ? ? ? 1_555 A DG 13 O6 ? ? R DC 9 R DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DC 9 O2 ? ? ? 1_555 A DG 13 N2 ? ? R DC 9 R DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 13 N1 ? ? R DC 9 U DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 13 O6 ? ? R DC 9 U DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 13 N2 ? ? R DC 9 U DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DG 10 O6 ? ? ? 1_555 A DC 11 N4 ? ? R DG 10 R DC 11 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog39 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DG 12 O6 ? ? R DG 10 R DG 12 1_555 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog40 hydrog ? ? A DG 10 O6 ? ? ? 1_555 A DG 12 N1 ? ? R DG 10 R DG 12 1_555 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog41 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 12 N3 ? ? R DG 10 U DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 12 O2 ? ? R DG 10 U DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 12 N4 ? ? R DG 10 U DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 10 N3 ? ? R DG 12 U DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 10 O2 ? ? R DG 12 U DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 10 N4 ? ? R DG 12 U DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A DG 13 N1 ? ? ? 1_555 B DC 9 N3 ? ? R DG 13 U DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A DG 13 N2 ? ? ? 1_555 B DC 9 O2 ? ? R DG 13 U DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A DG 13 O6 ? ? ? 1_555 B DC 9 N4 ? ? R DG 13 U DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A DG 14 N1 ? ? ? 1_555 B DC 8 N3 ? ? R DG 14 U DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A DG 14 N2 ? ? ? 1_555 B DC 8 O2 ? ? R DG 14 U DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A DG 14 O6 ? ? ? 1_555 B DC 8 N4 ? ? R DG 14 U DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A DT 15 N3 ? ? ? 1_555 B DA 7 N1 ? ? R DT 15 U DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A DT 15 O4 ? ? ? 1_555 B DA 7 N6 ? ? R DT 15 U DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A DG 16 N1 ? ? ? 1_555 B DC 6 N3 ? ? R DG 16 U DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A DG 16 N2 ? ? ? 1_555 B DC 6 O2 ? ? R DG 16 U DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A DG 16 O6 ? ? ? 1_555 B DC 6 N4 ? ? R DG 16 U DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A DA 17 N1 ? ? ? 1_555 B DT 5 N3 ? ? R DA 17 U DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A DA 17 N6 ? ? ? 1_555 B DT 5 O4 ? ? R DA 17 U DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A DT 18 N3 ? ? ? 1_555 B DA 4 N1 ? ? R DT 18 U DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A DT 18 O4 ? ? ? 1_555 B DA 4 N6 ? ? R DT 18 U DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A DA 19 N1 ? ? ? 1_555 B DT 3 N3 ? ? R DA 19 U DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A DA 19 N6 ? ? ? 1_555 B DT 3 O4 ? ? R DA 19 U DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A DC 20 O2 ? ? ? 1_555 B DG 2 N1 ? ? R DC 20 U DG 2 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog65 hydrog ? ? B DG 2 N2 ? ? ? 1_555 B DG 20 N3 ? ? U DG 2 U DG 20 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog66 hydrog ? ? B DG 2 N3 ? ? ? 1_555 B DG 20 N2 ? ? U DG 2 U DG 20 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog67 hydrog ? ? B DT 3 N3 ? ? ? 1_555 B DA 19 N1 ? ? U DT 3 U DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? B DT 3 O4 ? ? ? 1_555 B DA 19 N6 ? ? U DT 3 U DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? B DA 4 N1 ? ? ? 1_555 B DT 18 N3 ? ? U DA 4 U DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? B DA 4 N6 ? ? ? 1_555 B DT 18 O4 ? ? U DA 4 U DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? B DT 5 N3 ? ? ? 1_555 B DA 17 N1 ? ? U DT 5 U DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? B DT 5 O4 ? ? ? 1_555 B DA 17 N6 ? ? U DT 5 U DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? B DC 6 N3 ? ? ? 1_555 B DG 16 N1 ? ? U DC 6 U DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? B DC 6 N4 ? ? ? 1_555 B DG 16 O6 ? ? U DC 6 U DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? B DC 6 O2 ? ? ? 1_555 B DG 16 N2 ? ? U DC 6 U DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? B DA 7 N1 ? ? ? 1_555 B DT 15 N3 ? ? U DA 7 U DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? B DA 7 N6 ? ? ? 1_555 B DT 15 O4 ? ? U DA 7 U DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? B DC 8 N3 ? ? ? 1_555 B DG 14 N1 ? ? U DC 8 U DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? B DC 8 N4 ? ? ? 1_555 B DG 14 O6 ? ? U DC 8 U DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? B DC 8 O2 ? ? ? 1_555 B DG 14 N2 ? ? U DC 8 U DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? B DC 9 N3 ? ? ? 1_555 B DG 13 N1 ? ? U DC 9 U DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? B DC 9 N4 ? ? ? 1_555 B DG 13 O6 ? ? U DC 9 U DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? B DC 9 O2 ? ? ? 1_555 B DG 13 N2 ? ? U DC 9 U DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLU 1 C . ? GLU 2 A GLN 2 C ? GLN 3 A 1 -2.99 2 PHE 57 C . ? PHE 58 A PRO 58 C ? PRO 59 A 1 2.60 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG C 3 ? THR C 5 ? ARG A 4 THR A 6 A 2 LYS C 38 ? ILE C 43 ? LYS A 39 ILE A 44 A 3 VAL C 49 ? VAL C 54 ? VAL A 50 VAL A 55 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE C 4 ? O ILE A 5 N LEU C 41 ? N LEU A 42 A 2 3 O LYS C 38 ? O LYS A 39 N VAL C 54 ? N VAL A 55 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id SO4 _struct_site.pdbx_auth_seq_id 400 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE SO4 A 400' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 GLN C 2 ? GLN A 3 . ? 1_555 ? 2 AC1 6 GLN C 2 ? GLN A 3 . ? 8_656 ? 3 AC1 6 GLN C 2 ? GLN A 3 . ? 11_466 ? 4 AC1 6 ARG C 12 ? ARG A 13 . ? 11_466 ? 5 AC1 6 ARG C 12 ? ARG A 13 . ? 1_555 ? 6 AC1 6 ARG C 12 ? ARG A 13 . ? 8_656 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" R DC 2 ? ? "C3'" R DC 2 ? ? 1.372 1.419 -0.047 0.006 N 2 1 "O3'" R DT 3 ? ? "C3'" R DT 3 ? ? 1.382 1.419 -0.037 0.006 N 3 1 "O3'" R DA 4 ? ? "C3'" R DA 4 ? ? 1.355 1.419 -0.064 0.006 N 4 1 "O3'" R DG 13 ? ? "C3'" R DG 13 ? ? 1.329 1.419 -0.090 0.006 N 5 1 "O3'" U DG 2 ? ? "C3'" U DG 2 ? ? 1.372 1.419 -0.047 0.006 N 6 1 "O3'" U DT 3 ? ? "C3'" U DT 3 ? ? 1.382 1.419 -0.037 0.006 N 7 1 "O3'" U DA 4 ? ? "C3'" U DA 4 ? ? 1.355 1.419 -0.064 0.006 N 8 1 "O3'" U DG 13 ? ? "C3'" U DG 13 ? ? 1.329 1.419 -0.090 0.006 N 9 1 CD A GLU 2 ? ? OE2 A GLU 2 ? ? 1.323 1.252 0.071 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" R DA 1 ? ? "C5'" R DA 1 ? ? "C4'" R DA 1 ? ? 103.75 109.40 -5.65 0.80 N 2 1 "O4'" R DA 1 ? ? "C1'" R DA 1 ? ? N9 R DA 1 ? ? 116.57 108.30 8.27 0.30 N 3 1 P R DC 2 ? ? "O5'" R DC 2 ? ? "C5'" R DC 2 ? ? 108.17 120.90 -12.73 1.60 N 4 1 "C3'" R DC 2 ? ? "O3'" R DC 2 ? ? P R DT 3 ? ? 112.19 119.70 -7.51 1.20 Y 5 1 "O4'" R DA 4 ? ? "C1'" R DA 4 ? ? N9 R DA 4 ? ? 101.95 108.00 -6.05 0.70 N 6 1 "O5'" R DC 6 ? ? "C5'" R DC 6 ? ? "C4'" R DC 6 ? ? 103.14 109.40 -6.26 0.80 N 7 1 "O4'" R DC 6 ? ? "C1'" R DC 6 ? ? N1 R DC 6 ? ? 111.63 108.30 3.33 0.30 N 8 1 "O4'" R DA 7 ? ? "C1'" R DA 7 ? ? N9 R DA 7 ? ? 112.60 108.30 4.30 0.30 N 9 1 "C3'" R DA 7 ? ? "O3'" R DA 7 ? ? P R DC 8 ? ? 129.78 119.70 10.08 1.20 Y 10 1 "O4'" R DC 8 ? ? "C1'" R DC 8 ? ? N1 R DC 8 ? ? 112.57 108.30 4.27 0.30 N 11 1 "O4'" R DG 10 ? ? "C1'" R DG 10 ? ? N9 R DG 10 ? ? 110.72 108.30 2.42 0.30 N 12 1 "C3'" R DG 13 ? ? "O3'" R DG 13 ? ? P R DG 14 ? ? 110.89 119.70 -8.81 1.20 Y 13 1 "O4'" R DT 15 ? ? "C1'" R DT 15 ? ? N1 R DT 15 ? ? 112.84 108.30 4.54 0.30 N 14 1 "O4'" R DA 17 ? ? "C1'" R DA 17 ? ? N9 R DA 17 ? ? 111.85 108.30 3.55 0.30 N 15 1 "O4'" R DT 18 ? ? "C1'" R DT 18 ? ? N1 R DT 18 ? ? 116.44 108.30 8.14 0.30 N 16 1 "C3'" R DA 19 ? ? "O3'" R DA 19 ? ? P R DC 20 ? ? 128.28 119.70 8.58 1.20 Y 17 1 "O4'" R DC 20 ? ? "C4'" R DC 20 ? ? "C3'" R DC 20 ? ? 101.36 104.50 -3.14 0.40 N 18 1 "O4'" R DC 20 ? ? "C1'" R DC 20 ? ? N1 R DC 20 ? ? 111.35 108.30 3.05 0.30 N 19 1 "O5'" U DT 1 ? ? "C5'" U DT 1 ? ? "C4'" U DT 1 ? ? 103.75 109.40 -5.65 0.80 N 20 1 "O4'" U DT 1 ? ? "C1'" U DT 1 ? ? N1 U DT 1 ? ? 98.39 108.00 -9.61 0.70 N 21 1 P U DG 2 ? ? "O5'" U DG 2 ? ? "C5'" U DG 2 ? ? 108.17 120.90 -12.73 1.60 N 22 1 "C3'" U DG 2 ? ? "O3'" U DG 2 ? ? P U DT 3 ? ? 112.19 119.70 -7.51 1.20 Y 23 1 "O4'" U DA 4 ? ? "C1'" U DA 4 ? ? N9 U DA 4 ? ? 101.95 108.00 -6.05 0.70 N 24 1 "O5'" U DC 6 ? ? "C5'" U DC 6 ? ? "C4'" U DC 6 ? ? 103.14 109.40 -6.26 0.80 N 25 1 "O4'" U DC 6 ? ? "C1'" U DC 6 ? ? N1 U DC 6 ? ? 111.63 108.30 3.33 0.30 N 26 1 "O4'" U DA 7 ? ? "C1'" U DA 7 ? ? N9 U DA 7 ? ? 112.60 108.30 4.30 0.30 N 27 1 "C3'" U DA 7 ? ? "O3'" U DA 7 ? ? P U DC 8 ? ? 129.78 119.70 10.08 1.20 Y 28 1 "O4'" U DC 8 ? ? "C1'" U DC 8 ? ? N1 U DC 8 ? ? 112.60 108.30 4.30 0.30 N 29 1 "C3'" U DG 13 ? ? "O3'" U DG 13 ? ? P U DG 14 ? ? 110.92 119.70 -8.78 1.20 Y 30 1 "O4'" U DT 15 ? ? "C1'" U DT 15 ? ? N1 U DT 15 ? ? 112.86 108.30 4.56 0.30 N 31 1 "O4'" U DA 17 ? ? "C1'" U DA 17 ? ? N9 U DA 17 ? ? 111.85 108.30 3.55 0.30 N 32 1 "O4'" U DT 18 ? ? "C1'" U DT 18 ? ? N1 U DT 18 ? ? 116.44 108.30 8.14 0.30 N 33 1 "C3'" U DA 19 ? ? "O3'" U DA 19 ? ? P U DG 20 ? ? 128.28 119.70 8.58 1.20 Y 34 1 "O4'" U DG 20 ? ? "C4'" U DG 20 ? ? "C3'" U DG 20 ? ? 101.36 104.50 -3.14 0.40 N 35 1 "O4'" U DG 20 ? ? "C1'" U DG 20 ? ? N9 U DG 20 ? ? 111.12 108.30 2.82 0.30 N 36 1 CB A ASP 9 ? ? CG A ASP 9 ? ? OD1 A ASP 9 ? ? 112.04 118.30 -6.26 0.90 N 37 1 CA A THR 17 ? ? CB A THR 17 ? ? CG2 A THR 17 ? ? 103.83 112.40 -8.57 1.40 N 38 1 CB A ASP 22 ? ? CG A ASP 22 ? ? OD2 A ASP 22 ? ? 111.50 118.30 -6.80 0.90 N 39 1 CB A ASP 47 ? ? CG A ASP 47 ? ? OD1 A ASP 47 ? ? 111.19 118.30 -7.11 0.90 N 40 1 CA A PHE 58 ? ? CB A PHE 58 ? ? CG A PHE 58 ? ? 99.08 113.90 -14.82 2.40 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 19 ? ? -45.00 -71.72 2 1 ILE A 30 ? ? -34.39 -73.86 3 1 ALA A 46 ? ? -27.84 -71.75 # loop_ _pdbx_validate_polymer_linkage.id _pdbx_validate_polymer_linkage.PDB_model_num _pdbx_validate_polymer_linkage.auth_atom_id_1 _pdbx_validate_polymer_linkage.auth_asym_id_1 _pdbx_validate_polymer_linkage.auth_comp_id_1 _pdbx_validate_polymer_linkage.auth_seq_id_1 _pdbx_validate_polymer_linkage.PDB_ins_code_1 _pdbx_validate_polymer_linkage.label_alt_id_1 _pdbx_validate_polymer_linkage.auth_atom_id_2 _pdbx_validate_polymer_linkage.auth_asym_id_2 _pdbx_validate_polymer_linkage.auth_comp_id_2 _pdbx_validate_polymer_linkage.auth_seq_id_2 _pdbx_validate_polymer_linkage.PDB_ins_code_2 _pdbx_validate_polymer_linkage.label_alt_id_2 _pdbx_validate_polymer_linkage.dist 1 1 "O3'" R DG 10 ? ? P R DC 11 ? ? 18.11 2 1 "O3'" U DC 10 ? ? P U DG 11 ? ? 18.11 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A SO4 400 ? D SO4 . 2 1 A SO4 400 ? D SO4 . # _pdbx_entry_details.entry_id 6CRO _pdbx_entry_details.compound_details ;THIS ENTRY CONTAINS THE COMPLETE ASYMMETRIC UNIT. THE PROTEIN CHAIN IS PRESENTED AS CHAIN A WITH OCCUPANCY 1.0. THE 10-RESIDUE LONG DNA DUPLEX IS DISORDERED WITH EACH CONFORMATION HAVING OCCUPANCY 0.5. RESIDUES 1-10 OF BOTH DNA CHAINS R AND U PRESENT ONE CONFORMATION AND RESIDUES 11-20 OF BOTH DNA CHAINS PRESENT THE OTHER CONFORMATION. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HIS N N N N 266 HIS CA C N S 267 HIS C C N N 268 HIS O O N N 269 HIS CB C N N 270 HIS CG C Y N 271 HIS ND1 N Y N 272 HIS CD2 C Y N 273 HIS CE1 C Y N 274 HIS NE2 N Y N 275 HIS OXT O N N 276 HIS H H N N 277 HIS H2 H N N 278 HIS HA H N N 279 HIS HB2 H N N 280 HIS HB3 H N N 281 HIS HD1 H N N 282 HIS HD2 H N N 283 HIS HE1 H N N 284 HIS HE2 H N N 285 HIS HXT H N N 286 HOH O O N N 287 HOH H1 H N N 288 HOH H2 H N N 289 ILE N N N N 290 ILE CA C N S 291 ILE C C N N 292 ILE O O N N 293 ILE CB C N S 294 ILE CG1 C N N 295 ILE CG2 C N N 296 ILE CD1 C N N 297 ILE OXT O N N 298 ILE H H N N 299 ILE H2 H N N 300 ILE HA H N N 301 ILE HB H N N 302 ILE HG12 H N N 303 ILE HG13 H N N 304 ILE HG21 H N N 305 ILE HG22 H N N 306 ILE HG23 H N N 307 ILE HD11 H N N 308 ILE HD12 H N N 309 ILE HD13 H N N 310 ILE HXT H N N 311 LEU N N N N 312 LEU CA C N S 313 LEU C C N N 314 LEU O O N N 315 LEU CB C N N 316 LEU CG C N N 317 LEU CD1 C N N 318 LEU CD2 C N N 319 LEU OXT O N N 320 LEU H H N N 321 LEU H2 H N N 322 LEU HA H N N 323 LEU HB2 H N N 324 LEU HB3 H N N 325 LEU HG H N N 326 LEU HD11 H N N 327 LEU HD12 H N N 328 LEU HD13 H N N 329 LEU HD21 H N N 330 LEU HD22 H N N 331 LEU HD23 H N N 332 LEU HXT H N N 333 LYS N N N N 334 LYS CA C N S 335 LYS C C N N 336 LYS O O N N 337 LYS CB C N N 338 LYS CG C N N 339 LYS CD C N N 340 LYS CE C N N 341 LYS NZ N N N 342 LYS OXT O N N 343 LYS H H N N 344 LYS H2 H N N 345 LYS HA H N N 346 LYS HB2 H N N 347 LYS HB3 H N N 348 LYS HG2 H N N 349 LYS HG3 H N N 350 LYS HD2 H N N 351 LYS HD3 H N N 352 LYS HE2 H N N 353 LYS HE3 H N N 354 LYS HZ1 H N N 355 LYS HZ2 H N N 356 LYS HZ3 H N N 357 LYS HXT H N N 358 MET N N N N 359 MET CA C N S 360 MET C C N N 361 MET O O N N 362 MET CB C N N 363 MET CG C N N 364 MET SD S N N 365 MET CE C N N 366 MET OXT O N N 367 MET H H N N 368 MET H2 H N N 369 MET HA H N N 370 MET HB2 H N N 371 MET HB3 H N N 372 MET HG2 H N N 373 MET HG3 H N N 374 MET HE1 H N N 375 MET HE2 H N N 376 MET HE3 H N N 377 MET HXT H N N 378 PHE N N N N 379 PHE CA C N S 380 PHE C C N N 381 PHE O O N N 382 PHE CB C N N 383 PHE CG C Y N 384 PHE CD1 C Y N 385 PHE CD2 C Y N 386 PHE CE1 C Y N 387 PHE CE2 C Y N 388 PHE CZ C Y N 389 PHE OXT O N N 390 PHE H H N N 391 PHE H2 H N N 392 PHE HA H N N 393 PHE HB2 H N N 394 PHE HB3 H N N 395 PHE HD1 H N N 396 PHE HD2 H N N 397 PHE HE1 H N N 398 PHE HE2 H N N 399 PHE HZ H N N 400 PHE HXT H N N 401 PRO N N N N 402 PRO CA C N S 403 PRO C C N N 404 PRO O O N N 405 PRO CB C N N 406 PRO CG C N N 407 PRO CD C N N 408 PRO OXT O N N 409 PRO H H N N 410 PRO HA H N N 411 PRO HB2 H N N 412 PRO HB3 H N N 413 PRO HG2 H N N 414 PRO HG3 H N N 415 PRO HD2 H N N 416 PRO HD3 H N N 417 PRO HXT H N N 418 SER N N N N 419 SER CA C N S 420 SER C C N N 421 SER O O N N 422 SER CB C N N 423 SER OG O N N 424 SER OXT O N N 425 SER H H N N 426 SER H2 H N N 427 SER HA H N N 428 SER HB2 H N N 429 SER HB3 H N N 430 SER HG H N N 431 SER HXT H N N 432 SO4 S S N N 433 SO4 O1 O N N 434 SO4 O2 O N N 435 SO4 O3 O N N 436 SO4 O4 O N N 437 THR N N N N 438 THR CA C N S 439 THR C C N N 440 THR O O N N 441 THR CB C N R 442 THR OG1 O N N 443 THR CG2 C N N 444 THR OXT O N N 445 THR H H N N 446 THR H2 H N N 447 THR HA H N N 448 THR HB H N N 449 THR HG1 H N N 450 THR HG21 H N N 451 THR HG22 H N N 452 THR HG23 H N N 453 THR HXT H N N 454 TYR N N N N 455 TYR CA C N S 456 TYR C C N N 457 TYR O O N N 458 TYR CB C N N 459 TYR CG C Y N 460 TYR CD1 C Y N 461 TYR CD2 C Y N 462 TYR CE1 C Y N 463 TYR CE2 C Y N 464 TYR CZ C Y N 465 TYR OH O N N 466 TYR OXT O N N 467 TYR H H N N 468 TYR H2 H N N 469 TYR HA H N N 470 TYR HB2 H N N 471 TYR HB3 H N N 472 TYR HD1 H N N 473 TYR HD2 H N N 474 TYR HE1 H N N 475 TYR HE2 H N N 476 TYR HH H N N 477 TYR HXT H N N 478 VAL N N N N 479 VAL CA C N S 480 VAL C C N N 481 VAL O O N N 482 VAL CB C N N 483 VAL CG1 C N N 484 VAL CG2 C N N 485 VAL OXT O N N 486 VAL H H N N 487 VAL H2 H N N 488 VAL HA H N N 489 VAL HB H N N 490 VAL HG11 H N N 491 VAL HG12 H N N 492 VAL HG13 H N N 493 VAL HG21 H N N 494 VAL HG22 H N N 495 VAL HG23 H N N 496 VAL HXT H N N 497 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 HOH O H1 sing N N 286 HOH O H2 sing N N 287 ILE N CA sing N N 288 ILE N H sing N N 289 ILE N H2 sing N N 290 ILE CA C sing N N 291 ILE CA CB sing N N 292 ILE CA HA sing N N 293 ILE C O doub N N 294 ILE C OXT sing N N 295 ILE CB CG1 sing N N 296 ILE CB CG2 sing N N 297 ILE CB HB sing N N 298 ILE CG1 CD1 sing N N 299 ILE CG1 HG12 sing N N 300 ILE CG1 HG13 sing N N 301 ILE CG2 HG21 sing N N 302 ILE CG2 HG22 sing N N 303 ILE CG2 HG23 sing N N 304 ILE CD1 HD11 sing N N 305 ILE CD1 HD12 sing N N 306 ILE CD1 HD13 sing N N 307 ILE OXT HXT sing N N 308 LEU N CA sing N N 309 LEU N H sing N N 310 LEU N H2 sing N N 311 LEU CA C sing N N 312 LEU CA CB sing N N 313 LEU CA HA sing N N 314 LEU C O doub N N 315 LEU C OXT sing N N 316 LEU CB CG sing N N 317 LEU CB HB2 sing N N 318 LEU CB HB3 sing N N 319 LEU CG CD1 sing N N 320 LEU CG CD2 sing N N 321 LEU CG HG sing N N 322 LEU CD1 HD11 sing N N 323 LEU CD1 HD12 sing N N 324 LEU CD1 HD13 sing N N 325 LEU CD2 HD21 sing N N 326 LEU CD2 HD22 sing N N 327 LEU CD2 HD23 sing N N 328 LEU OXT HXT sing N N 329 LYS N CA sing N N 330 LYS N H sing N N 331 LYS N H2 sing N N 332 LYS CA C sing N N 333 LYS CA CB sing N N 334 LYS CA HA sing N N 335 LYS C O doub N N 336 LYS C OXT sing N N 337 LYS CB CG sing N N 338 LYS CB HB2 sing N N 339 LYS CB HB3 sing N N 340 LYS CG CD sing N N 341 LYS CG HG2 sing N N 342 LYS CG HG3 sing N N 343 LYS CD CE sing N N 344 LYS CD HD2 sing N N 345 LYS CD HD3 sing N N 346 LYS CE NZ sing N N 347 LYS CE HE2 sing N N 348 LYS CE HE3 sing N N 349 LYS NZ HZ1 sing N N 350 LYS NZ HZ2 sing N N 351 LYS NZ HZ3 sing N N 352 LYS OXT HXT sing N N 353 MET N CA sing N N 354 MET N H sing N N 355 MET N H2 sing N N 356 MET CA C sing N N 357 MET CA CB sing N N 358 MET CA HA sing N N 359 MET C O doub N N 360 MET C OXT sing N N 361 MET CB CG sing N N 362 MET CB HB2 sing N N 363 MET CB HB3 sing N N 364 MET CG SD sing N N 365 MET CG HG2 sing N N 366 MET CG HG3 sing N N 367 MET SD CE sing N N 368 MET CE HE1 sing N N 369 MET CE HE2 sing N N 370 MET CE HE3 sing N N 371 MET OXT HXT sing N N 372 PHE N CA sing N N 373 PHE N H sing N N 374 PHE N H2 sing N N 375 PHE CA C sing N N 376 PHE CA CB sing N N 377 PHE CA HA sing N N 378 PHE C O doub N N 379 PHE C OXT sing N N 380 PHE CB CG sing N N 381 PHE CB HB2 sing N N 382 PHE CB HB3 sing N N 383 PHE CG CD1 doub Y N 384 PHE CG CD2 sing Y N 385 PHE CD1 CE1 sing Y N 386 PHE CD1 HD1 sing N N 387 PHE CD2 CE2 doub Y N 388 PHE CD2 HD2 sing N N 389 PHE CE1 CZ doub Y N 390 PHE CE1 HE1 sing N N 391 PHE CE2 CZ sing Y N 392 PHE CE2 HE2 sing N N 393 PHE CZ HZ sing N N 394 PHE OXT HXT sing N N 395 PRO N CA sing N N 396 PRO N CD sing N N 397 PRO N H sing N N 398 PRO CA C sing N N 399 PRO CA CB sing N N 400 PRO CA HA sing N N 401 PRO C O doub N N 402 PRO C OXT sing N N 403 PRO CB CG sing N N 404 PRO CB HB2 sing N N 405 PRO CB HB3 sing N N 406 PRO CG CD sing N N 407 PRO CG HG2 sing N N 408 PRO CG HG3 sing N N 409 PRO CD HD2 sing N N 410 PRO CD HD3 sing N N 411 PRO OXT HXT sing N N 412 SER N CA sing N N 413 SER N H sing N N 414 SER N H2 sing N N 415 SER CA C sing N N 416 SER CA CB sing N N 417 SER CA HA sing N N 418 SER C O doub N N 419 SER C OXT sing N N 420 SER CB OG sing N N 421 SER CB HB2 sing N N 422 SER CB HB3 sing N N 423 SER OG HG sing N N 424 SER OXT HXT sing N N 425 SO4 S O1 doub N N 426 SO4 S O2 doub N N 427 SO4 S O3 sing N N 428 SO4 S O4 sing N N 429 THR N CA sing N N 430 THR N H sing N N 431 THR N H2 sing N N 432 THR CA C sing N N 433 THR CA CB sing N N 434 THR CA HA sing N N 435 THR C O doub N N 436 THR C OXT sing N N 437 THR CB OG1 sing N N 438 THR CB CG2 sing N N 439 THR CB HB sing N N 440 THR OG1 HG1 sing N N 441 THR CG2 HG21 sing N N 442 THR CG2 HG22 sing N N 443 THR CG2 HG23 sing N N 444 THR OXT HXT sing N N 445 TYR N CA sing N N 446 TYR N H sing N N 447 TYR N H2 sing N N 448 TYR CA C sing N N 449 TYR CA CB sing N N 450 TYR CA HA sing N N 451 TYR C O doub N N 452 TYR C OXT sing N N 453 TYR CB CG sing N N 454 TYR CB HB2 sing N N 455 TYR CB HB3 sing N N 456 TYR CG CD1 doub Y N 457 TYR CG CD2 sing Y N 458 TYR CD1 CE1 sing Y N 459 TYR CD1 HD1 sing N N 460 TYR CD2 CE2 doub Y N 461 TYR CD2 HD2 sing N N 462 TYR CE1 CZ doub Y N 463 TYR CE1 HE1 sing N N 464 TYR CE2 CZ sing Y N 465 TYR CE2 HE2 sing N N 466 TYR CZ OH sing N N 467 TYR OH HH sing N N 468 TYR OXT HXT sing N N 469 VAL N CA sing N N 470 VAL N H sing N N 471 VAL N H2 sing N N 472 VAL CA C sing N N 473 VAL CA CB sing N N 474 VAL CA HA sing N N 475 VAL C O doub N N 476 VAL C OXT sing N N 477 VAL CB CG1 sing N N 478 VAL CB CG2 sing N N 479 VAL CB HB sing N N 480 VAL CG1 HG11 sing N N 481 VAL CG1 HG12 sing N N 482 VAL CG1 HG13 sing N N 483 VAL CG2 HG21 sing N N 484 VAL CG2 HG22 sing N N 485 VAL CG2 HG23 sing N N 486 VAL OXT HXT sing N N 487 # _ndb_struct_conf_na.entry_id 6CRO _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 10 1_555 B DC 12 1_555 -0.330 -0.254 0.646 1.394 -35.668 0.280 1 R_DG10:DC12_U R 10 ? U 12 ? 19 1 1 B DC 10 1_555 A DG 12 1_555 0.630 -0.387 1.248 6.807 -15.239 -11.035 2 U_DC10:DG12_R U 10 ? R 12 ? 19 1 1 A DC 9 1_555 A DG 13 1_555 -0.303 0.226 -0.210 11.000 -2.875 -0.019 3 R_DC9:DG13_R R 9 ? R 13 ? 19 1 1 B DG 13 1_555 B DC 9 1_555 0.302 0.225 -0.212 -11.001 -2.876 -0.023 4 U_DG13:DC9_U U 13 ? U 9 ? 19 1 1 B DG 14 1_555 B DC 8 1_555 0.434 0.077 0.333 -5.683 -7.144 1.191 5 U_DG14:DC8_U U 14 ? U 8 ? 19 1 1 B DT 15 1_555 B DA 7 1_555 0.424 -0.283 0.178 -5.259 -8.507 -6.028 6 U_DT15:DA7_U U 15 ? U 7 ? 20 1 1 B DG 16 1_555 B DC 6 1_555 0.094 -0.599 -0.096 8.814 -0.735 -7.926 7 U_DG16:DC6_U U 16 ? U 6 ? 19 1 1 A DG 16 1_555 A DC 6 1_555 0.094 -0.601 -0.094 8.812 -0.731 -7.928 8 R_DG16:DC6_R R 16 ? R 6 ? 19 1 1 B DA 17 1_555 B DT 5 1_555 0.116 -0.391 0.291 7.934 -1.347 -6.046 9 U_DA17:DT5_U U 17 ? U 5 ? 20 1 1 B DT 18 1_555 B DA 4 1_555 -0.541 -0.039 -0.150 5.363 -13.429 -2.156 10 U_DT18:DA4_U U 18 ? U 4 ? 20 1 1 A DT 18 1_555 A DA 4 1_555 -0.542 -0.039 -0.148 5.354 -13.428 -2.154 11 R_DT18:DA4_R R 18 ? R 4 ? 20 1 1 B DA 19 1_555 B DT 3 1_555 -0.088 -0.217 0.371 15.544 23.164 7.599 12 U_DA19:DT3_U U 19 ? U 3 ? 20 1 1 B DG 20 1_555 A DC 2 1_555 0.836 0.024 0.065 44.065 -12.275 23.184 13 U_DG20:DC2_R U 20 ? R 2 ? 19 1 1 A DC 20 1_555 B DG 2 1_555 1.428 -0.632 1.322 31.297 -4.514 15.322 14 R_DC20:DG2_U R 20 ? U 2 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 10 1_555 B DC 12 1_555 B DC 10 1_555 A DG 12 1_555 -0.365 0.087 -0.244 -8.091 0.357 5.664 0.517 2.367 0.162 2.431 55.033 9.880 1 RU_DG10DC10:DG12DC12_RU R 10 ? U 12 ? U 10 ? R 12 ? 1 B DC 10 1_555 A DG 12 1_555 A DC 9 1_555 A DG 13 1_555 0.840 -0.241 -3.428 11.604 -7.645 -42.561 -0.446 -0.054 -3.522 10.212 15.500 -44.672 2 UR_DC10DC9:DG13DG12_RR U 10 ? R 12 ? R 9 ? R 13 ? 1 A DC 9 1_555 A DG 13 1_555 B DG 13 1_555 B DC 9 1_555 0.000 0.000 0.000 -179.999 0.006 -117.080 0.000 0.000 0.000 -0.003 -90.000 -179.999 3 RU_DC9DG13:DC9DG13_UR R 9 ? R 13 ? U 13 ? U 9 ? 1 B DG 13 1_555 B DC 9 1_555 B DG 14 1_555 B DC 8 1_555 0.240 -0.209 3.360 -12.234 -2.455 27.641 0.106 -2.977 2.995 -4.838 24.110 30.277 4 UU_DG13DG14:DC8DC9_UU U 13 ? U 9 ? U 14 ? U 8 ? 1 B DG 14 1_555 B DC 8 1_555 B DT 15 1_555 B DA 7 1_555 -0.519 -1.015 3.382 5.961 2.879 38.083 -1.893 1.526 3.185 4.372 -9.052 38.633 5 UU_DG14DT15:DA7DC8_UU U 14 ? U 8 ? U 15 ? U 7 ? 1 B DT 15 1_555 B DA 7 1_555 B DG 16 1_555 B DC 6 1_555 0.279 0.477 3.118 1.256 5.878 27.268 -0.370 -0.287 3.159 12.280 -2.623 27.911 6 UU_DT15DG16:DC6DA7_UU U 15 ? U 7 ? U 16 ? U 6 ? 1 B DG 16 1_555 B DC 6 1_555 A DG 16 1_555 A DC 6 1_555 0.000 0.000 0.000 -0.001 0.002 -0.001 0.000 0.000 0.000 41.208 18.865 0.000 7 UR_DG16DG16:DC6DC6_RU U 16 ? U 6 ? R 16 ? R 6 ? 1 A DG 16 1_555 A DC 6 1_555 B DA 17 1_555 B DT 5 1_555 0.092 -1.576 3.177 -3.443 7.697 33.900 -3.698 -0.632 2.742 12.953 5.794 34.903 8 RU_DG16DA17:DT5DC6_UR R 16 ? R 6 ? U 17 ? U 5 ? 1 B DA 17 1_555 B DT 5 1_555 B DT 18 1_555 B DA 4 1_555 0.588 -0.734 3.331 6.093 -6.280 28.798 -0.049 0.192 3.459 -12.274 -11.908 30.071 9 UU_DA17DT18:DA4DT5_UU U 17 ? U 5 ? U 18 ? U 4 ? 1 B DT 18 1_555 B DA 4 1_555 A DT 18 1_555 A DA 4 1_555 0.000 0.000 0.000 -0.004 0.000 0.001 0.000 0.000 0.000 42.687 -28.294 0.000 10 UR_DT18DT18:DA4DA4_RU U 18 ? U 4 ? R 18 ? R 4 ? 1 A DT 18 1_555 A DA 4 1_555 B DA 19 1_555 B DT 3 1_555 0.851 -0.915 3.048 -6.813 7.059 32.126 -2.603 -2.456 2.566 12.399 11.968 33.553 11 RU_DT18DA19:DT3DA4_UR R 18 ? R 4 ? U 19 ? U 3 ? 1 B DA 19 1_555 B DT 3 1_555 B DG 20 1_555 A DC 2 1_555 0.632 -0.724 3.269 1.831 0.374 28.767 -1.537 -0.860 3.293 0.752 -3.680 28.826 12 UU_DA19DG20:DC2DT3_RU U 19 ? U 3 ? U 20 ? R 2 ? 1 B DG 20 1_555 A DC 2 1_555 A DC 20 1_555 B DG 2 1_555 -0.354 -0.054 0.345 -11.191 2.613 5.030 -0.783 -0.674 0.443 15.108 64.696 12.541 13 UR_DG20DC20:DG2DC2_UR U 20 ? R 2 ? R 20 ? U 2 ? # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'TRUNCATED VERSION OF THE PREVIOUS LOW-RESOLUTION COMPLEX STRUCTURE' # _atom_sites.entry_id 6CRO _atom_sites.fract_transf_matrix[1][1] 0.009712 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009712 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009712 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_