data_6HH2 # _entry.id 6HH2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6HH2 pdb_00006hh2 10.2210/pdb6hh2/pdb WWPDB D_1200011658 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-09-11 2 'Structure model' 1 1 2019-11-27 3 'Structure model' 1 2 2024-01-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' citation 6 3 'Structure model' database_2 7 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_abbrev' 2 2 'Structure model' '_citation.journal_id_CSD' 3 2 'Structure model' '_citation.journal_id_ISSN' 4 2 'Structure model' '_citation.page_first' 5 2 'Structure model' '_citation.page_last' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 3 'Structure model' '_citation.country' 11 3 'Structure model' '_database_2.pdbx_DOI' 12 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6HH2 _pdbx_database_status.recvd_initial_deposition_date 2018-08-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Khan, A.R.' 1 0000-0003-1176-6952 'McGrath, E.' 2 ? 'Waschbusch, D.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Small GTPases' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2154-1256 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first 1 _citation.page_last 14 _citation.title 'LRRK2 binds to the Rab32 subfamily in a GTP-dependent mannerviaits armadillo domain.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1080/21541248.2019.1666623 _citation.pdbx_database_id_PubMed 31552791 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'McGrath, E.' 1 0000-0002-7257-560X primary 'Waschbusch, D.' 2 ? primary 'Baker, B.M.' 3 ? primary 'Khan, A.R.' 4 0000-0003-1176-6952 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ras-related protein Rab-7L1' 20487.184 1 ? ? ? ? 2 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 water nat water 18.015 194 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Rab-7-like protein 1,Ras-related protein Rab-29' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDIAGLERFTSMTRLY YRDASAAVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPALLLANKSDLSPWAVSRDQIDRFSKENGFTGWTETSVK ENKNINEAMRVLIEKMMRNS ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDIAGLERFTSMTRLY YRDASAAVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPALLLANKSDLSPWAVSRDQIDRFSKENGFTGWTETSVK ENKNINEAMRVLIEKMMRNS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-DIPHOSPHATE" GDP 3 'MAGNESIUM ION' MG 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 GLY n 1 6 SER n 1 7 ARG n 1 8 ASP n 1 9 HIS n 1 10 LEU n 1 11 PHE n 1 12 LYS n 1 13 VAL n 1 14 LEU n 1 15 VAL n 1 16 VAL n 1 17 GLY n 1 18 ASP n 1 19 ALA n 1 20 ALA n 1 21 VAL n 1 22 GLY n 1 23 LYS n 1 24 THR n 1 25 SER n 1 26 LEU n 1 27 VAL n 1 28 GLN n 1 29 ARG n 1 30 TYR n 1 31 SER n 1 32 GLN n 1 33 ASP n 1 34 SER n 1 35 PHE n 1 36 SER n 1 37 LYS n 1 38 HIS n 1 39 TYR n 1 40 LYS n 1 41 SER n 1 42 THR n 1 43 VAL n 1 44 GLY n 1 45 VAL n 1 46 ASP n 1 47 PHE n 1 48 ALA n 1 49 LEU n 1 50 LYS n 1 51 VAL n 1 52 LEU n 1 53 GLN n 1 54 TRP n 1 55 SER n 1 56 ASP n 1 57 TYR n 1 58 GLU n 1 59 ILE n 1 60 VAL n 1 61 ARG n 1 62 LEU n 1 63 GLN n 1 64 LEU n 1 65 TRP n 1 66 ASP n 1 67 ILE n 1 68 ALA n 1 69 GLY n 1 70 LEU n 1 71 GLU n 1 72 ARG n 1 73 PHE n 1 74 THR n 1 75 SER n 1 76 MET n 1 77 THR n 1 78 ARG n 1 79 LEU n 1 80 TYR n 1 81 TYR n 1 82 ARG n 1 83 ASP n 1 84 ALA n 1 85 SER n 1 86 ALA n 1 87 ALA n 1 88 VAL n 1 89 ILE n 1 90 MET n 1 91 PHE n 1 92 ASP n 1 93 VAL n 1 94 THR n 1 95 ASN n 1 96 ALA n 1 97 THR n 1 98 THR n 1 99 PHE n 1 100 SER n 1 101 ASN n 1 102 SER n 1 103 GLN n 1 104 ARG n 1 105 TRP n 1 106 LYS n 1 107 GLN n 1 108 ASP n 1 109 LEU n 1 110 ASP n 1 111 SER n 1 112 LYS n 1 113 LEU n 1 114 THR n 1 115 LEU n 1 116 PRO n 1 117 ASN n 1 118 GLY n 1 119 GLU n 1 120 PRO n 1 121 VAL n 1 122 PRO n 1 123 ALA n 1 124 LEU n 1 125 LEU n 1 126 LEU n 1 127 ALA n 1 128 ASN n 1 129 LYS n 1 130 SER n 1 131 ASP n 1 132 LEU n 1 133 SER n 1 134 PRO n 1 135 TRP n 1 136 ALA n 1 137 VAL n 1 138 SER n 1 139 ARG n 1 140 ASP n 1 141 GLN n 1 142 ILE n 1 143 ASP n 1 144 ARG n 1 145 PHE n 1 146 SER n 1 147 LYS n 1 148 GLU n 1 149 ASN n 1 150 GLY n 1 151 PHE n 1 152 THR n 1 153 GLY n 1 154 TRP n 1 155 THR n 1 156 GLU n 1 157 THR n 1 158 SER n 1 159 VAL n 1 160 LYS n 1 161 GLU n 1 162 ASN n 1 163 LYS n 1 164 ASN n 1 165 ILE n 1 166 ASN n 1 167 GLU n 1 168 ALA n 1 169 MET n 1 170 ARG n 1 171 VAL n 1 172 LEU n 1 173 ILE n 1 174 GLU n 1 175 LYS n 1 176 MET n 1 177 MET n 1 178 ARG n 1 179 ASN n 1 180 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 180 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'RAB29, RAB7L1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 SER 2 -1 ? ? ? A . n A 1 3 HIS 3 0 ? ? ? A . n A 1 4 MET 4 1 ? ? ? A . n A 1 5 GLY 5 2 ? ? ? A . n A 1 6 SER 6 3 ? ? ? A . n A 1 7 ARG 7 4 4 ARG ARG A . n A 1 8 ASP 8 5 5 ASP ASP A . n A 1 9 HIS 9 6 6 HIS HIS A . n A 1 10 LEU 10 7 7 LEU LEU A . n A 1 11 PHE 11 8 8 PHE PHE A . n A 1 12 LYS 12 9 9 LYS LYS A . n A 1 13 VAL 13 10 10 VAL VAL A . n A 1 14 LEU 14 11 11 LEU LEU A . n A 1 15 VAL 15 12 12 VAL VAL A . n A 1 16 VAL 16 13 13 VAL VAL A . n A 1 17 GLY 17 14 14 GLY GLY A . n A 1 18 ASP 18 15 15 ASP ASP A . n A 1 19 ALA 19 16 16 ALA ALA A . n A 1 20 ALA 20 17 17 ALA ALA A . n A 1 21 VAL 21 18 18 VAL VAL A . n A 1 22 GLY 22 19 19 GLY GLY A . n A 1 23 LYS 23 20 20 LYS LYS A . n A 1 24 THR 24 21 21 THR THR A . n A 1 25 SER 25 22 22 SER SER A . n A 1 26 LEU 26 23 23 LEU LEU A . n A 1 27 VAL 27 24 24 VAL VAL A . n A 1 28 GLN 28 25 25 GLN GLN A . n A 1 29 ARG 29 26 26 ARG ARG A . n A 1 30 TYR 30 27 27 TYR TYR A . n A 1 31 SER 31 28 28 SER SER A . n A 1 32 GLN 32 29 29 GLN GLN A . n A 1 33 ASP 33 30 30 ASP ASP A . n A 1 34 SER 34 31 31 SER SER A . n A 1 35 PHE 35 32 32 PHE PHE A . n A 1 36 SER 36 33 33 SER SER A . n A 1 37 LYS 37 34 34 LYS LYS A . n A 1 38 HIS 38 35 35 HIS HIS A . n A 1 39 TYR 39 36 36 TYR TYR A . n A 1 40 LYS 40 37 37 LYS LYS A . n A 1 41 SER 41 38 38 SER SER A . n A 1 42 THR 42 39 39 THR THR A . n A 1 43 VAL 43 40 40 VAL VAL A . n A 1 44 GLY 44 41 41 GLY GLY A . n A 1 45 VAL 45 42 42 VAL VAL A . n A 1 46 ASP 46 43 43 ASP ASP A . n A 1 47 PHE 47 44 44 PHE PHE A . n A 1 48 ALA 48 45 45 ALA ALA A . n A 1 49 LEU 49 46 46 LEU LEU A . n A 1 50 LYS 50 47 47 LYS LYS A . n A 1 51 VAL 51 48 48 VAL VAL A . n A 1 52 LEU 52 49 49 LEU LEU A . n A 1 53 GLN 53 50 50 GLN GLN A . n A 1 54 TRP 54 51 51 TRP TRP A . n A 1 55 SER 55 52 52 SER SER A . n A 1 56 ASP 56 53 53 ASP ASP A . n A 1 57 TYR 57 54 54 TYR TYR A . n A 1 58 GLU 58 55 55 GLU GLU A . n A 1 59 ILE 59 56 56 ILE ILE A . n A 1 60 VAL 60 57 57 VAL VAL A . n A 1 61 ARG 61 58 58 ARG ARG A . n A 1 62 LEU 62 59 59 LEU LEU A . n A 1 63 GLN 63 60 60 GLN GLN A . n A 1 64 LEU 64 61 61 LEU LEU A . n A 1 65 TRP 65 62 62 TRP TRP A . n A 1 66 ASP 66 63 63 ASP ASP A . n A 1 67 ILE 67 64 64 ILE ILE A . n A 1 68 ALA 68 65 65 ALA ALA A . n A 1 69 GLY 69 66 66 GLY GLY A . n A 1 70 LEU 70 67 67 LEU LEU A . n A 1 71 GLU 71 68 68 GLU GLU A . n A 1 72 ARG 72 69 69 ARG ARG A . n A 1 73 PHE 73 70 70 PHE PHE A . n A 1 74 THR 74 71 71 THR THR A . n A 1 75 SER 75 72 72 SER SER A . n A 1 76 MET 76 73 73 MET MET A . n A 1 77 THR 77 74 74 THR THR A . n A 1 78 ARG 78 75 75 ARG ARG A . n A 1 79 LEU 79 76 76 LEU LEU A . n A 1 80 TYR 80 77 77 TYR TYR A . n A 1 81 TYR 81 78 78 TYR TYR A . n A 1 82 ARG 82 79 79 ARG ARG A . n A 1 83 ASP 83 80 80 ASP ASP A . n A 1 84 ALA 84 81 81 ALA ALA A . n A 1 85 SER 85 82 82 SER SER A . n A 1 86 ALA 86 83 83 ALA ALA A . n A 1 87 ALA 87 84 84 ALA ALA A . n A 1 88 VAL 88 85 85 VAL VAL A . n A 1 89 ILE 89 86 86 ILE ILE A . n A 1 90 MET 90 87 87 MET MET A . n A 1 91 PHE 91 88 88 PHE PHE A . n A 1 92 ASP 92 89 89 ASP ASP A . n A 1 93 VAL 93 90 90 VAL VAL A . n A 1 94 THR 94 91 91 THR THR A . n A 1 95 ASN 95 92 92 ASN ASN A . n A 1 96 ALA 96 93 93 ALA ALA A . n A 1 97 THR 97 94 94 THR THR A . n A 1 98 THR 98 95 95 THR THR A . n A 1 99 PHE 99 96 96 PHE PHE A . n A 1 100 SER 100 97 97 SER SER A . n A 1 101 ASN 101 98 98 ASN ASN A . n A 1 102 SER 102 99 99 SER SER A . n A 1 103 GLN 103 100 100 GLN GLN A . n A 1 104 ARG 104 101 101 ARG ARG A . n A 1 105 TRP 105 102 102 TRP TRP A . n A 1 106 LYS 106 103 103 LYS LYS A . n A 1 107 GLN 107 104 104 GLN GLN A . n A 1 108 ASP 108 105 105 ASP ASP A . n A 1 109 LEU 109 106 106 LEU LEU A . n A 1 110 ASP 110 107 107 ASP ASP A . n A 1 111 SER 111 108 108 SER SER A . n A 1 112 LYS 112 109 109 LYS LYS A . n A 1 113 LEU 113 110 110 LEU LEU A . n A 1 114 THR 114 111 111 THR THR A . n A 1 115 LEU 115 112 112 LEU LEU A . n A 1 116 PRO 116 113 113 PRO PRO A . n A 1 117 ASN 117 114 114 ASN ASN A . n A 1 118 GLY 118 115 115 GLY GLY A . n A 1 119 GLU 119 116 116 GLU GLU A . n A 1 120 PRO 120 117 117 PRO PRO A . n A 1 121 VAL 121 118 118 VAL VAL A . n A 1 122 PRO 122 119 119 PRO PRO A . n A 1 123 ALA 123 120 120 ALA ALA A . n A 1 124 LEU 124 121 121 LEU LEU A . n A 1 125 LEU 125 122 122 LEU LEU A . n A 1 126 LEU 126 123 123 LEU LEU A . n A 1 127 ALA 127 124 124 ALA ALA A . n A 1 128 ASN 128 125 125 ASN ASN A . n A 1 129 LYS 129 126 126 LYS LYS A . n A 1 130 SER 130 127 127 SER SER A . n A 1 131 ASP 131 128 128 ASP ASP A . n A 1 132 LEU 132 129 129 LEU LEU A . n A 1 133 SER 133 130 130 SER SER A . n A 1 134 PRO 134 131 131 PRO PRO A . n A 1 135 TRP 135 132 132 TRP TRP A . n A 1 136 ALA 136 133 133 ALA ALA A . n A 1 137 VAL 137 134 134 VAL VAL A . n A 1 138 SER 138 135 135 SER SER A . n A 1 139 ARG 139 136 136 ARG ARG A . n A 1 140 ASP 140 137 137 ASP ASP A . n A 1 141 GLN 141 138 138 GLN GLN A . n A 1 142 ILE 142 139 139 ILE ILE A . n A 1 143 ASP 143 140 140 ASP ASP A . n A 1 144 ARG 144 141 141 ARG ARG A . n A 1 145 PHE 145 142 142 PHE PHE A . n A 1 146 SER 146 143 143 SER SER A . n A 1 147 LYS 147 144 144 LYS LYS A . n A 1 148 GLU 148 145 145 GLU GLU A . n A 1 149 ASN 149 146 146 ASN ASN A . n A 1 150 GLY 150 147 147 GLY GLY A . n A 1 151 PHE 151 148 148 PHE PHE A . n A 1 152 THR 152 149 149 THR THR A . n A 1 153 GLY 153 150 150 GLY GLY A . n A 1 154 TRP 154 151 151 TRP TRP A . n A 1 155 THR 155 152 152 THR THR A . n A 1 156 GLU 156 153 153 GLU GLU A . n A 1 157 THR 157 154 154 THR THR A . n A 1 158 SER 158 155 155 SER SER A . n A 1 159 VAL 159 156 156 VAL VAL A . n A 1 160 LYS 160 157 157 LYS LYS A . n A 1 161 GLU 161 158 158 GLU GLU A . n A 1 162 ASN 162 159 159 ASN ASN A . n A 1 163 LYS 163 160 160 LYS LYS A . n A 1 164 ASN 164 161 161 ASN ASN A . n A 1 165 ILE 165 162 162 ILE ILE A . n A 1 166 ASN 166 163 163 ASN ASN A . n A 1 167 GLU 167 164 164 GLU GLU A . n A 1 168 ALA 168 165 165 ALA ALA A . n A 1 169 MET 169 166 166 MET MET A . n A 1 170 ARG 170 167 167 ARG ARG A . n A 1 171 VAL 171 168 168 VAL VAL A . n A 1 172 LEU 172 169 169 LEU LEU A . n A 1 173 ILE 173 170 170 ILE ILE A . n A 1 174 GLU 174 171 171 GLU GLU A . n A 1 175 LYS 175 172 172 LYS LYS A . n A 1 176 MET 176 173 173 MET MET A . n A 1 177 MET 177 174 174 MET MET A . n A 1 178 ARG 178 175 175 ARG ARG A . n A 1 179 ASN 179 176 176 ASN ASN A . n A 1 180 SER 180 177 177 SER SER A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP 1 201 201 GDP GDP A . C 3 MG 1 202 1 MG MG A . D 4 HOH 1 301 118 HOH HOH A . D 4 HOH 2 302 117 HOH HOH A . D 4 HOH 3 303 101 HOH HOH A . D 4 HOH 4 304 171 HOH HOH A . D 4 HOH 5 305 76 HOH HOH A . D 4 HOH 6 306 121 HOH HOH A . D 4 HOH 7 307 107 HOH HOH A . D 4 HOH 8 308 146 HOH HOH A . D 4 HOH 9 309 130 HOH HOH A . D 4 HOH 10 310 61 HOH HOH A . D 4 HOH 11 311 100 HOH HOH A . D 4 HOH 12 312 57 HOH HOH A . D 4 HOH 13 313 89 HOH HOH A . D 4 HOH 14 314 15 HOH HOH A . D 4 HOH 15 315 102 HOH HOH A . D 4 HOH 16 316 41 HOH HOH A . D 4 HOH 17 317 136 HOH HOH A . D 4 HOH 18 318 165 HOH HOH A . D 4 HOH 19 319 95 HOH HOH A . D 4 HOH 20 320 111 HOH HOH A . D 4 HOH 21 321 160 HOH HOH A . D 4 HOH 22 322 49 HOH HOH A . D 4 HOH 23 323 1 HOH HOH A . D 4 HOH 24 324 25 HOH HOH A . D 4 HOH 25 325 19 HOH HOH A . D 4 HOH 26 326 47 HOH HOH A . D 4 HOH 27 327 108 HOH HOH A . D 4 HOH 28 328 132 HOH HOH A . D 4 HOH 29 329 68 HOH HOH A . D 4 HOH 30 330 21 HOH HOH A . D 4 HOH 31 331 69 HOH HOH A . D 4 HOH 32 332 37 HOH HOH A . D 4 HOH 33 333 98 HOH HOH A . D 4 HOH 34 334 172 HOH HOH A . D 4 HOH 35 335 88 HOH HOH A . D 4 HOH 36 336 16 HOH HOH A . D 4 HOH 37 337 11 HOH HOH A . D 4 HOH 38 338 59 HOH HOH A . D 4 HOH 39 339 27 HOH HOH A . D 4 HOH 40 340 91 HOH HOH A . D 4 HOH 41 341 28 HOH HOH A . D 4 HOH 42 342 35 HOH HOH A . D 4 HOH 43 343 154 HOH HOH A . D 4 HOH 44 344 106 HOH HOH A . D 4 HOH 45 345 94 HOH HOH A . D 4 HOH 46 346 5 HOH HOH A . D 4 HOH 47 347 3 HOH HOH A . D 4 HOH 48 348 125 HOH HOH A . D 4 HOH 49 349 2 HOH HOH A . D 4 HOH 50 350 93 HOH HOH A . D 4 HOH 51 351 72 HOH HOH A . D 4 HOH 52 352 156 HOH HOH A . D 4 HOH 53 353 20 HOH HOH A . D 4 HOH 54 354 133 HOH HOH A . D 4 HOH 55 355 63 HOH HOH A . D 4 HOH 56 356 62 HOH HOH A . D 4 HOH 57 357 90 HOH HOH A . D 4 HOH 58 358 54 HOH HOH A . D 4 HOH 59 359 134 HOH HOH A . D 4 HOH 60 360 13 HOH HOH A . D 4 HOH 61 361 84 HOH HOH A . D 4 HOH 62 362 71 HOH HOH A . D 4 HOH 63 363 10 HOH HOH A . D 4 HOH 64 364 161 HOH HOH A . D 4 HOH 65 365 164 HOH HOH A . D 4 HOH 66 366 141 HOH HOH A . D 4 HOH 67 367 26 HOH HOH A . D 4 HOH 68 368 180 HOH HOH A . D 4 HOH 69 369 183 HOH HOH A . D 4 HOH 70 370 144 HOH HOH A . D 4 HOH 71 371 114 HOH HOH A . D 4 HOH 72 372 92 HOH HOH A . D 4 HOH 73 373 39 HOH HOH A . D 4 HOH 74 374 138 HOH HOH A . D 4 HOH 75 375 83 HOH HOH A . D 4 HOH 76 376 40 HOH HOH A . D 4 HOH 77 377 81 HOH HOH A . D 4 HOH 78 378 119 HOH HOH A . D 4 HOH 79 379 199 HOH HOH A . D 4 HOH 80 380 126 HOH HOH A . D 4 HOH 81 381 74 HOH HOH A . D 4 HOH 82 382 87 HOH HOH A . D 4 HOH 83 383 9 HOH HOH A . D 4 HOH 84 384 38 HOH HOH A . D 4 HOH 85 385 8 HOH HOH A . D 4 HOH 86 386 79 HOH HOH A . D 4 HOH 87 387 122 HOH HOH A . D 4 HOH 88 388 148 HOH HOH A . D 4 HOH 89 389 31 HOH HOH A . D 4 HOH 90 390 80 HOH HOH A . D 4 HOH 91 391 201 HOH HOH A . D 4 HOH 92 392 34 HOH HOH A . D 4 HOH 93 393 67 HOH HOH A . D 4 HOH 94 394 168 HOH HOH A . D 4 HOH 95 395 65 HOH HOH A . D 4 HOH 96 396 115 HOH HOH A . D 4 HOH 97 397 17 HOH HOH A . D 4 HOH 98 398 18 HOH HOH A . D 4 HOH 99 399 48 HOH HOH A . D 4 HOH 100 400 55 HOH HOH A . D 4 HOH 101 401 145 HOH HOH A . D 4 HOH 102 402 70 HOH HOH A . D 4 HOH 103 403 33 HOH HOH A . D 4 HOH 104 404 50 HOH HOH A . D 4 HOH 105 405 4 HOH HOH A . D 4 HOH 106 406 29 HOH HOH A . D 4 HOH 107 407 24 HOH HOH A . D 4 HOH 108 408 42 HOH HOH A . D 4 HOH 109 409 181 HOH HOH A . D 4 HOH 110 410 23 HOH HOH A . D 4 HOH 111 411 137 HOH HOH A . D 4 HOH 112 412 110 HOH HOH A . D 4 HOH 113 413 64 HOH HOH A . D 4 HOH 114 414 169 HOH HOH A . D 4 HOH 115 415 167 HOH HOH A . D 4 HOH 116 416 77 HOH HOH A . D 4 HOH 117 417 193 HOH HOH A . D 4 HOH 118 418 30 HOH HOH A . D 4 HOH 119 419 155 HOH HOH A . D 4 HOH 120 420 113 HOH HOH A . D 4 HOH 121 421 7 HOH HOH A . D 4 HOH 122 422 86 HOH HOH A . D 4 HOH 123 423 58 HOH HOH A . D 4 HOH 124 424 14 HOH HOH A . D 4 HOH 125 425 163 HOH HOH A . D 4 HOH 126 426 56 HOH HOH A . D 4 HOH 127 427 140 HOH HOH A . D 4 HOH 128 428 149 HOH HOH A . D 4 HOH 129 429 189 HOH HOH A . D 4 HOH 130 430 127 HOH HOH A . D 4 HOH 131 431 177 HOH HOH A . D 4 HOH 132 432 105 HOH HOH A . D 4 HOH 133 433 159 HOH HOH A . D 4 HOH 134 434 166 HOH HOH A . D 4 HOH 135 435 45 HOH HOH A . D 4 HOH 136 436 184 HOH HOH A . D 4 HOH 137 437 51 HOH HOH A . D 4 HOH 138 438 179 HOH HOH A . D 4 HOH 139 439 176 HOH HOH A . D 4 HOH 140 440 152 HOH HOH A . D 4 HOH 141 441 97 HOH HOH A . D 4 HOH 142 442 142 HOH HOH A . D 4 HOH 143 443 12 HOH HOH A . D 4 HOH 144 444 157 HOH HOH A . D 4 HOH 145 445 187 HOH HOH A . D 4 HOH 146 446 6 HOH HOH A . D 4 HOH 147 447 85 HOH HOH A . D 4 HOH 148 448 153 HOH HOH A . D 4 HOH 149 449 75 HOH HOH A . D 4 HOH 150 450 120 HOH HOH A . D 4 HOH 151 451 73 HOH HOH A . D 4 HOH 152 452 129 HOH HOH A . D 4 HOH 153 453 109 HOH HOH A . D 4 HOH 154 454 99 HOH HOH A . D 4 HOH 155 455 197 HOH HOH A . D 4 HOH 156 456 195 HOH HOH A . D 4 HOH 157 457 200 HOH HOH A . D 4 HOH 158 458 60 HOH HOH A . D 4 HOH 159 459 151 HOH HOH A . D 4 HOH 160 460 66 HOH HOH A . D 4 HOH 161 461 191 HOH HOH A . D 4 HOH 162 462 173 HOH HOH A . D 4 HOH 163 463 190 HOH HOH A . D 4 HOH 164 464 112 HOH HOH A . D 4 HOH 165 465 44 HOH HOH A . D 4 HOH 166 466 182 HOH HOH A . D 4 HOH 167 467 202 HOH HOH A . D 4 HOH 168 468 198 HOH HOH A . D 4 HOH 169 469 123 HOH HOH A . D 4 HOH 170 470 158 HOH HOH A . D 4 HOH 171 471 124 HOH HOH A . D 4 HOH 172 472 139 HOH HOH A . D 4 HOH 173 473 104 HOH HOH A . D 4 HOH 174 474 143 HOH HOH A . D 4 HOH 175 475 188 HOH HOH A . D 4 HOH 176 476 147 HOH HOH A . D 4 HOH 177 477 186 HOH HOH A . D 4 HOH 178 478 170 HOH HOH A . D 4 HOH 179 479 174 HOH HOH A . D 4 HOH 180 480 82 HOH HOH A . D 4 HOH 181 481 53 HOH HOH A . D 4 HOH 182 482 128 HOH HOH A . D 4 HOH 183 483 131 HOH HOH A . D 4 HOH 184 484 185 HOH HOH A . D 4 HOH 185 485 96 HOH HOH A . D 4 HOH 186 486 196 HOH HOH A . D 4 HOH 187 487 194 HOH HOH A . D 4 HOH 188 488 116 HOH HOH A . D 4 HOH 189 489 150 HOH HOH A . D 4 HOH 190 490 135 HOH HOH A . D 4 HOH 191 491 192 HOH HOH A . D 4 HOH 192 492 78 HOH HOH A . D 4 HOH 193 493 103 HOH HOH A . D 4 HOH 194 494 162 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.14_3211: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 6HH2 _cell.details ? _cell.formula_units_Z ? _cell.length_a 71.960 _cell.length_a_esd ? _cell.length_b 71.960 _cell.length_b_esd ? _cell.length_c 86.348 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HH2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6HH2 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.15 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 60.95 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 288 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;2M NaCl 0.1M MES pH 6.5 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-06-05 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.98 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6HH2 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.449 _reflns.d_resolution_low 86.35 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 46405 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 9.7 _reflns.pdbx_Rmerge_I_obs 0.052 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 27.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.055 _reflns.pdbx_Rpim_I_all 0.017 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.449 _reflns_shell.d_res_low 1.47 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.4 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.631 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value 1.736 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.585 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.68 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6HH2 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.449 _refine.ls_d_res_low 62.319 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 46316 _refine.ls_number_reflns_R_free 2383 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.73 _refine.ls_percent_reflns_R_free 5.15 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1661 _refine.ls_R_factor_R_free 0.1843 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1651 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.32 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 6hdu _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 18.88 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.15 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1402 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 194 _refine_hist.number_atoms_total 1625 _refine_hist.d_res_high 1.449 _refine_hist.d_res_low 62.319 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.017 ? 1511 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.629 ? 2064 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 15.721 ? 574 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.147 ? 232 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 ? 257 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.4490 1.4786 . . 130 2474 97.00 . . . 0.2705 . 0.2849 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.4786 1.5107 . . 140 2537 100.00 . . . 0.3252 . 0.2585 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5107 1.5459 . . 150 2548 100.00 . . . 0.2578 . 0.2356 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5459 1.5845 . . 141 2568 100.00 . . . 0.2496 . 0.2169 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5845 1.6274 . . 157 2564 100.00 . . . 0.1982 . 0.2040 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6274 1.6752 . . 136 2555 100.00 . . . 0.2183 . 0.1862 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6752 1.7293 . . 109 2611 100.00 . . . 0.2098 . 0.1865 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7293 1.7911 . . 138 2527 100.00 . . . 0.2201 . 0.1799 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7911 1.8629 . . 143 2566 100.00 . . . 0.1552 . 0.1739 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8629 1.9476 . . 148 2608 100.00 . . . 0.2033 . 0.1721 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9476 2.0503 . . 134 2583 100.00 . . . 0.1831 . 0.1656 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0503 2.1788 . . 132 2594 100.00 . . . 0.1857 . 0.1581 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1788 2.3470 . . 139 2578 100.00 . . . 0.1736 . 0.1520 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3470 2.5832 . . 127 2620 100.00 . . . 0.1908 . 0.1649 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5832 2.9570 . . 144 2626 100.00 . . . 0.1901 . 0.1692 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9570 3.7255 . . 165 2621 100.00 . . . 0.1673 . 0.1496 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.7255 62.3766 . . 150 2753 100.00 . . . 0.1712 . 0.1534 . . . . . . . . . . # _struct.entry_id 6HH2 _struct.title 'Rab29 small GTPase bound to GDP' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6HH2 _struct_keywords.text 'Rab GTPase, membrane trafficking, SIGNALING PROTEIN' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RAB7L_HUMAN _struct_ref.pdbx_db_accession O14966 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDIAGQERFTSMTRLYYRD ASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENK NINEAMRVLIEKMMRNS ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6HH2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 180 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O14966 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 177 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 177 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6HH2 GLY A 1 ? UNP O14966 ? ? 'expression tag' -2 1 1 6HH2 SER A 2 ? UNP O14966 ? ? 'expression tag' -1 2 1 6HH2 HIS A 3 ? UNP O14966 ? ? 'expression tag' 0 3 1 6HH2 LEU A 70 ? UNP O14966 GLN 67 'engineered mutation' 67 4 1 6HH2 ALA A 87 ? UNP O14966 CYS 84 'engineered mutation' 84 5 1 6HH2 ALA A 123 ? UNP O14966 CYS 120 'engineered mutation' 120 6 1 6HH2 SER A 130 ? UNP O14966 CYS 127 'engineered mutation' 127 7 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 750 ? 1 MORE -14 ? 1 'SSA (A^2)' 9170 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 22 ? SER A 31 ? GLY A 19 SER A 28 1 ? 10 HELX_P HELX_P2 AA2 TYR A 39 ? GLY A 44 ? TYR A 36 GLY A 41 1 ? 6 HELX_P HELX_P3 AA3 ALA A 68 ? THR A 74 ? ALA A 65 THR A 71 5 ? 7 HELX_P HELX_P4 AA4 THR A 77 ? ARG A 82 ? THR A 74 ARG A 79 1 ? 6 HELX_P HELX_P5 AA5 ASN A 95 ? LEU A 113 ? ASN A 92 LEU A 110 1 ? 19 HELX_P HELX_P6 AA6 SER A 138 ? ASN A 149 ? SER A 135 ASN A 146 1 ? 12 HELX_P HELX_P7 AA7 ASN A 164 ? ASN A 179 ? ASN A 161 ASN A 176 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A THR 24 OG1 ? ? ? 1_555 C MG . MG ? ? A THR 21 A MG 202 1_555 ? ? ? ? ? ? ? 2.082 ? ? metalc2 metalc ? ? B GDP . O3B ? ? ? 1_555 C MG . MG ? ? A GDP 201 A MG 202 1_555 ? ? ? ? ? ? ? 2.032 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 202 A HOH 323 1_555 ? ? ? ? ? ? ? 2.129 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 202 A HOH 347 1_555 ? ? ? ? ? ? ? 2.089 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 202 A HOH 349 1_555 ? ? ? ? ? ? ? 2.024 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 202 A HOH 405 1_555 ? ? ? ? ? ? ? 2.108 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG1 ? A THR 24 ? A THR 21 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O3B ? B GDP . ? A GDP 201 ? 1_555 90.2 ? 2 OG1 ? A THR 24 ? A THR 21 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? D HOH . ? A HOH 323 ? 1_555 174.2 ? 3 O3B ? B GDP . ? A GDP 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? D HOH . ? A HOH 323 ? 1_555 94.5 ? 4 OG1 ? A THR 24 ? A THR 21 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? D HOH . ? A HOH 347 ? 1_555 88.5 ? 5 O3B ? B GDP . ? A GDP 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? D HOH . ? A HOH 347 ? 1_555 91.3 ? 6 O ? D HOH . ? A HOH 323 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? D HOH . ? A HOH 347 ? 1_555 88.0 ? 7 OG1 ? A THR 24 ? A THR 21 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? D HOH . ? A HOH 349 ? 1_555 92.9 ? 8 O3B ? B GDP . ? A GDP 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? D HOH . ? A HOH 349 ? 1_555 89.0 ? 9 O ? D HOH . ? A HOH 323 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? D HOH . ? A HOH 349 ? 1_555 90.5 ? 10 O ? D HOH . ? A HOH 347 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? D HOH . ? A HOH 349 ? 1_555 178.5 ? 11 OG1 ? A THR 24 ? A THR 21 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? D HOH . ? A HOH 405 ? 1_555 88.6 ? 12 O3B ? B GDP . ? A GDP 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? D HOH . ? A HOH 405 ? 1_555 177.0 ? 13 O ? D HOH . ? A HOH 323 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? D HOH . ? A HOH 405 ? 1_555 86.8 ? 14 O ? D HOH . ? A HOH 347 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? D HOH . ? A HOH 405 ? 1_555 91.4 ? 15 O ? D HOH . ? A HOH 349 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? D HOH . ? A HOH 405 ? 1_555 88.3 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 133 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 130 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 134 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 131 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.35 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 48 ? SER A 55 ? ALA A 45 SER A 52 AA1 2 GLU A 58 ? ASP A 66 ? GLU A 55 ASP A 63 AA1 3 ASP A 8 ? GLY A 17 ? ASP A 5 GLY A 14 AA1 4 ALA A 86 ? ASP A 92 ? ALA A 83 ASP A 89 AA1 5 ALA A 123 ? ASN A 128 ? ALA A 120 ASN A 125 AA1 6 GLY A 153 ? GLU A 156 ? GLY A 150 GLU A 153 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ALA A 48 ? N ALA A 45 O LEU A 64 ? O LEU A 61 AA1 2 3 O GLN A 63 ? O GLN A 60 N VAL A 13 ? N VAL A 10 AA1 3 4 N LEU A 14 ? N LEU A 11 O VAL A 88 ? O VAL A 85 AA1 4 5 N ILE A 89 ? N ILE A 86 O LEU A 124 ? O LEU A 121 AA1 5 6 N LEU A 125 ? N LEU A 122 O GLY A 153 ? O GLY A 150 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GDP 201 ? 23 'binding site for residue GDP A 201' AC2 Software A MG 202 ? 6 'binding site for residue MG A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 23 ALA A 20 ? ALA A 17 . ? 1_555 ? 2 AC1 23 VAL A 21 ? VAL A 18 . ? 1_555 ? 3 AC1 23 GLY A 22 ? GLY A 19 . ? 1_555 ? 4 AC1 23 LYS A 23 ? LYS A 20 . ? 1_555 ? 5 AC1 23 THR A 24 ? THR A 21 . ? 1_555 ? 6 AC1 23 SER A 25 ? SER A 22 . ? 1_555 ? 7 AC1 23 ASN A 128 ? ASN A 125 . ? 1_555 ? 8 AC1 23 LYS A 129 ? LYS A 126 . ? 1_555 ? 9 AC1 23 ASP A 131 ? ASP A 128 . ? 1_555 ? 10 AC1 23 LEU A 132 ? LEU A 129 . ? 1_555 ? 11 AC1 23 SER A 158 ? SER A 155 . ? 1_555 ? 12 AC1 23 VAL A 159 ? VAL A 156 . ? 1_555 ? 13 AC1 23 LYS A 160 ? LYS A 157 . ? 1_555 ? 14 AC1 23 MG C . ? MG A 202 . ? 1_555 ? 15 AC1 23 HOH D . ? HOH A 309 . ? 1_555 ? 16 AC1 23 HOH D . ? HOH A 323 . ? 1_555 ? 17 AC1 23 HOH D . ? HOH A 347 . ? 1_555 ? 18 AC1 23 HOH D . ? HOH A 349 . ? 1_555 ? 19 AC1 23 HOH D . ? HOH A 351 . ? 1_555 ? 20 AC1 23 HOH D . ? HOH A 358 . ? 1_555 ? 21 AC1 23 HOH D . ? HOH A 406 . ? 1_555 ? 22 AC1 23 HOH D . ? HOH A 413 . ? 1_555 ? 23 AC1 23 HOH D . ? HOH A 434 . ? 1_555 ? 24 AC2 6 THR A 24 ? THR A 21 . ? 1_555 ? 25 AC2 6 GDP B . ? GDP A 201 . ? 1_555 ? 26 AC2 6 HOH D . ? HOH A 323 . ? 1_555 ? 27 AC2 6 HOH D . ? HOH A 347 . ? 1_555 ? 28 AC2 6 HOH D . ? HOH A 349 . ? 1_555 ? 29 AC2 6 HOH D . ? HOH A 405 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 455 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 462 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 N _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLN _pdbx_validate_rmsd_bond.auth_seq_id_1 138 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CA _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLN _pdbx_validate_rmsd_bond.auth_seq_id_2 138 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 A _pdbx_validate_rmsd_bond.bond_value 1.580 _pdbx_validate_rmsd_bond.bond_target_value 1.459 _pdbx_validate_rmsd_bond.bond_deviation 0.121 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.020 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ALA _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 65 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 47.83 _pdbx_validate_torsion.psi -116.25 # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 37.5723 _pdbx_refine_tls.origin_y 16.2535 _pdbx_refine_tls.origin_z 32.9528 _pdbx_refine_tls.T[1][1] 0.1730 _pdbx_refine_tls.T[2][2] 0.1614 _pdbx_refine_tls.T[3][3] 0.1582 _pdbx_refine_tls.T[1][2] -0.0269 _pdbx_refine_tls.T[1][3] -0.0046 _pdbx_refine_tls.T[2][3] -0.0076 _pdbx_refine_tls.L[1][1] 1.0889 _pdbx_refine_tls.L[2][2] 2.1746 _pdbx_refine_tls.L[3][3] 1.8491 _pdbx_refine_tls.L[1][2] -0.4119 _pdbx_refine_tls.L[1][3] 0.0468 _pdbx_refine_tls.L[2][3] 0.2797 _pdbx_refine_tls.S[1][1] 0.0025 _pdbx_refine_tls.S[1][2] -0.0020 _pdbx_refine_tls.S[1][3] 0.0209 _pdbx_refine_tls.S[2][1] 0.0115 _pdbx_refine_tls.S[2][2] 0.0245 _pdbx_refine_tls.S[2][3] -0.0910 _pdbx_refine_tls.S[3][1] -0.0473 _pdbx_refine_tls.S[3][2] -0.0101 _pdbx_refine_tls.S[3][3] -0.0304 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A SER -1 ? A SER 2 3 1 Y 1 A HIS 0 ? A HIS 3 4 1 Y 1 A MET 1 ? A MET 4 5 1 Y 1 A GLY 2 ? A GLY 5 6 1 Y 1 A SER 3 ? A SER 6 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GDP PB P N N 88 GDP O1B O N N 89 GDP O2B O N N 90 GDP O3B O N N 91 GDP O3A O N N 92 GDP PA P N N 93 GDP O1A O N N 94 GDP O2A O N N 95 GDP "O5'" O N N 96 GDP "C5'" C N N 97 GDP "C4'" C N R 98 GDP "O4'" O N N 99 GDP "C3'" C N S 100 GDP "O3'" O N N 101 GDP "C2'" C N R 102 GDP "O2'" O N N 103 GDP "C1'" C N R 104 GDP N9 N Y N 105 GDP C8 C Y N 106 GDP N7 N Y N 107 GDP C5 C Y N 108 GDP C6 C N N 109 GDP O6 O N N 110 GDP N1 N N N 111 GDP C2 C N N 112 GDP N2 N N N 113 GDP N3 N N N 114 GDP C4 C Y N 115 GDP HOB2 H N N 116 GDP HOB3 H N N 117 GDP HOA2 H N N 118 GDP "H5'" H N N 119 GDP "H5''" H N N 120 GDP "H4'" H N N 121 GDP "H3'" H N N 122 GDP "HO3'" H N N 123 GDP "H2'" H N N 124 GDP "HO2'" H N N 125 GDP "H1'" H N N 126 GDP H8 H N N 127 GDP HN1 H N N 128 GDP HN21 H N N 129 GDP HN22 H N N 130 GLN N N N N 131 GLN CA C N S 132 GLN C C N N 133 GLN O O N N 134 GLN CB C N N 135 GLN CG C N N 136 GLN CD C N N 137 GLN OE1 O N N 138 GLN NE2 N N N 139 GLN OXT O N N 140 GLN H H N N 141 GLN H2 H N N 142 GLN HA H N N 143 GLN HB2 H N N 144 GLN HB3 H N N 145 GLN HG2 H N N 146 GLN HG3 H N N 147 GLN HE21 H N N 148 GLN HE22 H N N 149 GLN HXT H N N 150 GLU N N N N 151 GLU CA C N S 152 GLU C C N N 153 GLU O O N N 154 GLU CB C N N 155 GLU CG C N N 156 GLU CD C N N 157 GLU OE1 O N N 158 GLU OE2 O N N 159 GLU OXT O N N 160 GLU H H N N 161 GLU H2 H N N 162 GLU HA H N N 163 GLU HB2 H N N 164 GLU HB3 H N N 165 GLU HG2 H N N 166 GLU HG3 H N N 167 GLU HE2 H N N 168 GLU HXT H N N 169 GLY N N N N 170 GLY CA C N N 171 GLY C C N N 172 GLY O O N N 173 GLY OXT O N N 174 GLY H H N N 175 GLY H2 H N N 176 GLY HA2 H N N 177 GLY HA3 H N N 178 GLY HXT H N N 179 HIS N N N N 180 HIS CA C N S 181 HIS C C N N 182 HIS O O N N 183 HIS CB C N N 184 HIS CG C Y N 185 HIS ND1 N Y N 186 HIS CD2 C Y N 187 HIS CE1 C Y N 188 HIS NE2 N Y N 189 HIS OXT O N N 190 HIS H H N N 191 HIS H2 H N N 192 HIS HA H N N 193 HIS HB2 H N N 194 HIS HB3 H N N 195 HIS HD1 H N N 196 HIS HD2 H N N 197 HIS HE1 H N N 198 HIS HE2 H N N 199 HIS HXT H N N 200 HOH O O N N 201 HOH H1 H N N 202 HOH H2 H N N 203 ILE N N N N 204 ILE CA C N S 205 ILE C C N N 206 ILE O O N N 207 ILE CB C N S 208 ILE CG1 C N N 209 ILE CG2 C N N 210 ILE CD1 C N N 211 ILE OXT O N N 212 ILE H H N N 213 ILE H2 H N N 214 ILE HA H N N 215 ILE HB H N N 216 ILE HG12 H N N 217 ILE HG13 H N N 218 ILE HG21 H N N 219 ILE HG22 H N N 220 ILE HG23 H N N 221 ILE HD11 H N N 222 ILE HD12 H N N 223 ILE HD13 H N N 224 ILE HXT H N N 225 LEU N N N N 226 LEU CA C N S 227 LEU C C N N 228 LEU O O N N 229 LEU CB C N N 230 LEU CG C N N 231 LEU CD1 C N N 232 LEU CD2 C N N 233 LEU OXT O N N 234 LEU H H N N 235 LEU H2 H N N 236 LEU HA H N N 237 LEU HB2 H N N 238 LEU HB3 H N N 239 LEU HG H N N 240 LEU HD11 H N N 241 LEU HD12 H N N 242 LEU HD13 H N N 243 LEU HD21 H N N 244 LEU HD22 H N N 245 LEU HD23 H N N 246 LEU HXT H N N 247 LYS N N N N 248 LYS CA C N S 249 LYS C C N N 250 LYS O O N N 251 LYS CB C N N 252 LYS CG C N N 253 LYS CD C N N 254 LYS CE C N N 255 LYS NZ N N N 256 LYS OXT O N N 257 LYS H H N N 258 LYS H2 H N N 259 LYS HA H N N 260 LYS HB2 H N N 261 LYS HB3 H N N 262 LYS HG2 H N N 263 LYS HG3 H N N 264 LYS HD2 H N N 265 LYS HD3 H N N 266 LYS HE2 H N N 267 LYS HE3 H N N 268 LYS HZ1 H N N 269 LYS HZ2 H N N 270 LYS HZ3 H N N 271 LYS HXT H N N 272 MET N N N N 273 MET CA C N S 274 MET C C N N 275 MET O O N N 276 MET CB C N N 277 MET CG C N N 278 MET SD S N N 279 MET CE C N N 280 MET OXT O N N 281 MET H H N N 282 MET H2 H N N 283 MET HA H N N 284 MET HB2 H N N 285 MET HB3 H N N 286 MET HG2 H N N 287 MET HG3 H N N 288 MET HE1 H N N 289 MET HE2 H N N 290 MET HE3 H N N 291 MET HXT H N N 292 MG MG MG N N 293 PHE N N N N 294 PHE CA C N S 295 PHE C C N N 296 PHE O O N N 297 PHE CB C N N 298 PHE CG C Y N 299 PHE CD1 C Y N 300 PHE CD2 C Y N 301 PHE CE1 C Y N 302 PHE CE2 C Y N 303 PHE CZ C Y N 304 PHE OXT O N N 305 PHE H H N N 306 PHE H2 H N N 307 PHE HA H N N 308 PHE HB2 H N N 309 PHE HB3 H N N 310 PHE HD1 H N N 311 PHE HD2 H N N 312 PHE HE1 H N N 313 PHE HE2 H N N 314 PHE HZ H N N 315 PHE HXT H N N 316 PRO N N N N 317 PRO CA C N S 318 PRO C C N N 319 PRO O O N N 320 PRO CB C N N 321 PRO CG C N N 322 PRO CD C N N 323 PRO OXT O N N 324 PRO H H N N 325 PRO HA H N N 326 PRO HB2 H N N 327 PRO HB3 H N N 328 PRO HG2 H N N 329 PRO HG3 H N N 330 PRO HD2 H N N 331 PRO HD3 H N N 332 PRO HXT H N N 333 SER N N N N 334 SER CA C N S 335 SER C C N N 336 SER O O N N 337 SER CB C N N 338 SER OG O N N 339 SER OXT O N N 340 SER H H N N 341 SER H2 H N N 342 SER HA H N N 343 SER HB2 H N N 344 SER HB3 H N N 345 SER HG H N N 346 SER HXT H N N 347 THR N N N N 348 THR CA C N S 349 THR C C N N 350 THR O O N N 351 THR CB C N R 352 THR OG1 O N N 353 THR CG2 C N N 354 THR OXT O N N 355 THR H H N N 356 THR H2 H N N 357 THR HA H N N 358 THR HB H N N 359 THR HG1 H N N 360 THR HG21 H N N 361 THR HG22 H N N 362 THR HG23 H N N 363 THR HXT H N N 364 TRP N N N N 365 TRP CA C N S 366 TRP C C N N 367 TRP O O N N 368 TRP CB C N N 369 TRP CG C Y N 370 TRP CD1 C Y N 371 TRP CD2 C Y N 372 TRP NE1 N Y N 373 TRP CE2 C Y N 374 TRP CE3 C Y N 375 TRP CZ2 C Y N 376 TRP CZ3 C Y N 377 TRP CH2 C Y N 378 TRP OXT O N N 379 TRP H H N N 380 TRP H2 H N N 381 TRP HA H N N 382 TRP HB2 H N N 383 TRP HB3 H N N 384 TRP HD1 H N N 385 TRP HE1 H N N 386 TRP HE3 H N N 387 TRP HZ2 H N N 388 TRP HZ3 H N N 389 TRP HH2 H N N 390 TRP HXT H N N 391 TYR N N N N 392 TYR CA C N S 393 TYR C C N N 394 TYR O O N N 395 TYR CB C N N 396 TYR CG C Y N 397 TYR CD1 C Y N 398 TYR CD2 C Y N 399 TYR CE1 C Y N 400 TYR CE2 C Y N 401 TYR CZ C Y N 402 TYR OH O N N 403 TYR OXT O N N 404 TYR H H N N 405 TYR H2 H N N 406 TYR HA H N N 407 TYR HB2 H N N 408 TYR HB3 H N N 409 TYR HD1 H N N 410 TYR HD2 H N N 411 TYR HE1 H N N 412 TYR HE2 H N N 413 TYR HH H N N 414 TYR HXT H N N 415 VAL N N N N 416 VAL CA C N S 417 VAL C C N N 418 VAL O O N N 419 VAL CB C N N 420 VAL CG1 C N N 421 VAL CG2 C N N 422 VAL OXT O N N 423 VAL H H N N 424 VAL H2 H N N 425 VAL HA H N N 426 VAL HB H N N 427 VAL HG11 H N N 428 VAL HG12 H N N 429 VAL HG13 H N N 430 VAL HG21 H N N 431 VAL HG22 H N N 432 VAL HG23 H N N 433 VAL HXT H N N 434 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GDP PB O1B doub N N 83 GDP PB O2B sing N N 84 GDP PB O3B sing N N 85 GDP PB O3A sing N N 86 GDP O2B HOB2 sing N N 87 GDP O3B HOB3 sing N N 88 GDP O3A PA sing N N 89 GDP PA O1A doub N N 90 GDP PA O2A sing N N 91 GDP PA "O5'" sing N N 92 GDP O2A HOA2 sing N N 93 GDP "O5'" "C5'" sing N N 94 GDP "C5'" "C4'" sing N N 95 GDP "C5'" "H5'" sing N N 96 GDP "C5'" "H5''" sing N N 97 GDP "C4'" "O4'" sing N N 98 GDP "C4'" "C3'" sing N N 99 GDP "C4'" "H4'" sing N N 100 GDP "O4'" "C1'" sing N N 101 GDP "C3'" "O3'" sing N N 102 GDP "C3'" "C2'" sing N N 103 GDP "C3'" "H3'" sing N N 104 GDP "O3'" "HO3'" sing N N 105 GDP "C2'" "O2'" sing N N 106 GDP "C2'" "C1'" sing N N 107 GDP "C2'" "H2'" sing N N 108 GDP "O2'" "HO2'" sing N N 109 GDP "C1'" N9 sing N N 110 GDP "C1'" "H1'" sing N N 111 GDP N9 C8 sing Y N 112 GDP N9 C4 sing Y N 113 GDP C8 N7 doub Y N 114 GDP C8 H8 sing N N 115 GDP N7 C5 sing Y N 116 GDP C5 C6 sing N N 117 GDP C5 C4 doub Y N 118 GDP C6 O6 doub N N 119 GDP C6 N1 sing N N 120 GDP N1 C2 sing N N 121 GDP N1 HN1 sing N N 122 GDP C2 N2 sing N N 123 GDP C2 N3 doub N N 124 GDP N2 HN21 sing N N 125 GDP N2 HN22 sing N N 126 GDP N3 C4 sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 HOH O H1 sing N N 195 HOH O H2 sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MET N CA sing N N 263 MET N H sing N N 264 MET N H2 sing N N 265 MET CA C sing N N 266 MET CA CB sing N N 267 MET CA HA sing N N 268 MET C O doub N N 269 MET C OXT sing N N 270 MET CB CG sing N N 271 MET CB HB2 sing N N 272 MET CB HB3 sing N N 273 MET CG SD sing N N 274 MET CG HG2 sing N N 275 MET CG HG3 sing N N 276 MET SD CE sing N N 277 MET CE HE1 sing N N 278 MET CE HE2 sing N N 279 MET CE HE3 sing N N 280 MET OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PRO N CA sing N N 305 PRO N CD sing N N 306 PRO N H sing N N 307 PRO CA C sing N N 308 PRO CA CB sing N N 309 PRO CA HA sing N N 310 PRO C O doub N N 311 PRO C OXT sing N N 312 PRO CB CG sing N N 313 PRO CB HB2 sing N N 314 PRO CB HB3 sing N N 315 PRO CG CD sing N N 316 PRO CG HG2 sing N N 317 PRO CG HG3 sing N N 318 PRO CD HD2 sing N N 319 PRO CD HD3 sing N N 320 PRO OXT HXT sing N N 321 SER N CA sing N N 322 SER N H sing N N 323 SER N H2 sing N N 324 SER CA C sing N N 325 SER CA CB sing N N 326 SER CA HA sing N N 327 SER C O doub N N 328 SER C OXT sing N N 329 SER CB OG sing N N 330 SER CB HB2 sing N N 331 SER CB HB3 sing N N 332 SER OG HG sing N N 333 SER OXT HXT sing N N 334 THR N CA sing N N 335 THR N H sing N N 336 THR N H2 sing N N 337 THR CA C sing N N 338 THR CA CB sing N N 339 THR CA HA sing N N 340 THR C O doub N N 341 THR C OXT sing N N 342 THR CB OG1 sing N N 343 THR CB CG2 sing N N 344 THR CB HB sing N N 345 THR OG1 HG1 sing N N 346 THR CG2 HG21 sing N N 347 THR CG2 HG22 sing N N 348 THR CG2 HG23 sing N N 349 THR OXT HXT sing N N 350 TRP N CA sing N N 351 TRP N H sing N N 352 TRP N H2 sing N N 353 TRP CA C sing N N 354 TRP CA CB sing N N 355 TRP CA HA sing N N 356 TRP C O doub N N 357 TRP C OXT sing N N 358 TRP CB CG sing N N 359 TRP CB HB2 sing N N 360 TRP CB HB3 sing N N 361 TRP CG CD1 doub Y N 362 TRP CG CD2 sing Y N 363 TRP CD1 NE1 sing Y N 364 TRP CD1 HD1 sing N N 365 TRP CD2 CE2 doub Y N 366 TRP CD2 CE3 sing Y N 367 TRP NE1 CE2 sing Y N 368 TRP NE1 HE1 sing N N 369 TRP CE2 CZ2 sing Y N 370 TRP CE3 CZ3 doub Y N 371 TRP CE3 HE3 sing N N 372 TRP CZ2 CH2 doub Y N 373 TRP CZ2 HZ2 sing N N 374 TRP CZ3 CH2 sing Y N 375 TRP CZ3 HZ3 sing N N 376 TRP CH2 HH2 sing N N 377 TRP OXT HXT sing N N 378 TYR N CA sing N N 379 TYR N H sing N N 380 TYR N H2 sing N N 381 TYR CA C sing N N 382 TYR CA CB sing N N 383 TYR CA HA sing N N 384 TYR C O doub N N 385 TYR C OXT sing N N 386 TYR CB CG sing N N 387 TYR CB HB2 sing N N 388 TYR CB HB3 sing N N 389 TYR CG CD1 doub Y N 390 TYR CG CD2 sing Y N 391 TYR CD1 CE1 sing Y N 392 TYR CD1 HD1 sing N N 393 TYR CD2 CE2 doub Y N 394 TYR CD2 HD2 sing N N 395 TYR CE1 CZ doub Y N 396 TYR CE1 HE1 sing N N 397 TYR CE2 CZ sing Y N 398 TYR CE2 HE2 sing N N 399 TYR CZ OH sing N N 400 TYR OH HH sing N N 401 TYR OXT HXT sing N N 402 VAL N CA sing N N 403 VAL N H sing N N 404 VAL N H2 sing N N 405 VAL CA C sing N N 406 VAL CA CB sing N N 407 VAL CA HA sing N N 408 VAL C O doub N N 409 VAL C OXT sing N N 410 VAL CB CG1 sing N N 411 VAL CB CG2 sing N N 412 VAL CB HB sing N N 413 VAL CG1 HG11 sing N N 414 VAL CG1 HG12 sing N N 415 VAL CG1 HG13 sing N N 416 VAL CG2 HG21 sing N N 417 VAL CG2 HG22 sing N N 418 VAL CG2 HG23 sing N N 419 VAL OXT HXT sing N N 420 # _pdbx_audit_support.funding_organization 'Science Foundation Ireland' _pdbx_audit_support.country Ireland _pdbx_audit_support.grant_number 12/1A/1239 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6HDU _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 6HH2 _atom_sites.fract_transf_matrix[1][1] 0.013897 _atom_sites.fract_transf_matrix[1][2] 0.008023 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016046 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011581 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_