HEADER VIRUS 19-OCT-18 6ILL TITLE CRYO-EM STRUCTURE OF ECHOVIRUS 6 COMPLEXED WITH ITS UNCOATING RECEPTOR TITLE 2 FCRN AT PH 5.5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN VP1; COMPND 3 CHAIN: A; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: CAPSID PROTEIN VP2; COMPND 6 CHAIN: B; COMPND 7 MOL_ID: 3; COMPND 8 MOLECULE: CAPSID PROTEIN VP3; COMPND 9 CHAIN: C; COMPND 10 MOL_ID: 4; COMPND 11 MOLECULE: CAPSID PROTEIN VP4; COMPND 12 CHAIN: D SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ECHOVIRUS E6; SOURCE 3 ORGANISM_TAXID: 12062; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: ECHOVIRUS E6; SOURCE 6 ORGANISM_TAXID: 12062; SOURCE 7 MOL_ID: 3; SOURCE 8 ORGANISM_SCIENTIFIC: ECHOVIRUS E6; SOURCE 9 ORGANISM_TAXID: 12062; SOURCE 10 MOL_ID: 4; SOURCE 11 ORGANISM_SCIENTIFIC: ECHOVIRUS E6; SOURCE 12 ORGANISM_TAXID: 12062 KEYWDS VIRUS-RECEPTOR COMPLEX, VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR G.F.GAO,S.LIU,X.ZHAO,R.PENG REVDAT 5 27-MAR-24 6ILL 1 REMARK REVDAT 4 12-JUN-19 6ILL 1 JRNL REVDAT 3 05-JUN-19 6ILL 1 JRNL REVDAT 2 29-MAY-19 6ILL 1 JRNL REVDAT 1 15-MAY-19 6ILL 0 JRNL AUTH X.ZHAO,G.ZHANG,S.LIU,X.CHEN,R.PENG,L.DAI,X.QU,S.LI,H.SONG, JRNL AUTH 2 Z.GAO,P.YUAN,Z.LIU,C.LI,Z.SHANG,Y.LI,M.ZHANG,J.QI,H.WANG, JRNL AUTH 3 N.DU,Y.WU,Y.BI,S.GAO,Y.SHI,J.YAN,Y.ZHANG,Z.XIE,W.WEI,G.F.GAO JRNL TITL HUMAN NEONATAL FC RECEPTOR IS THE CELLULAR UNCOATING JRNL TITL 2 RECEPTOR FOR ENTEROVIRUS B. JRNL REF CELL V. 177 1553 2019 JRNL REFN ISSN 1097-4172 JRNL PMID 31104841 JRNL DOI 10.1016/J.CELL.2019.04.035 REMARK 2 REMARK 2 RESOLUTION. 3.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.800 REMARK 3 NUMBER OF PARTICLES : 937 REMARK 3 CTF CORRECTION METHOD : NONE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6ILL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1300009422. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : CRYO-EM STRUCTURE OF ECHOVIRUS REMARK 245 6 COMPLEXED WITH ITS UNCOATING REMARK 245 RECEPTOR FCRN AT PH 5.5 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 5.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 QUANTUM (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.793130 -0.526917 -0.305456 279.10996 REMARK 350 BIOMT2 2 0.513615 0.309108 0.800407 -166.91591 REMARK 350 BIOMT3 2 -0.327329 -0.791713 0.515796 430.57555 REMARK 350 BIOMT1 3 0.458407 -0.338955 -0.821567 456.90951 REMARK 350 BIOMT2 3 0.304129 -0.808778 0.503372 269.47981 REMARK 350 BIOMT3 3 -0.835086 -0.480612 -0.267663 693.45325 REMARK 350 BIOMT1 4 0.458407 0.304129 -0.835086 287.68572 REMARK 350 BIOMT2 4 -0.338955 -0.808778 -0.480612 706.10310 REMARK 350 BIOMT3 4 -0.821567 0.503372 -0.267663 425.34507 REMARK 350 BIOMT1 5 0.793130 0.513615 -0.327329 5.30011 REMARK 350 BIOMT2 5 -0.526917 0.309108 -0.791713 539.55542 REMARK 350 BIOMT3 5 -0.305456 0.800407 0.515796 -3.23261 REMARK 350 BIOMT1 6 0.998493 -0.021522 -0.050490 19.68916 REMARK 350 BIOMT2 6 -0.021522 -0.999768 0.000544 543.12892 REMARK 350 BIOMT3 6 -0.050490 0.000544 -0.998724 547.82086 REMARK 350 BIOMT1 7 0.797407 -0.492802 -0.348264 280.23116 REMARK 350 BIOMT2 7 -0.530744 -0.298127 -0.793367 704.23320 REMARK 350 BIOMT3 7 0.287146 0.817476 -0.499280 103.61160 REMARK 350 BIOMT1 8 0.493334 -0.296771 -0.817648 435.09790 REMARK 350 BIOMT2 8 -0.314379 0.815624 -0.485719 264.25493 REMARK 350 BIOMT3 8 0.811041 0.496673 0.309076 -167.67056 REMARK 350 BIOMT1 9 0.506492 0.295663 -0.809969 270.26880 REMARK 350 BIOMT2 9 0.328564 0.802318 0.498328 -168.77087 REMARK 350 BIOMT3 9 0.797190 -0.518526 0.309224 108.87711 REMARK 350 BIOMT1 10 0.818697 0.465776 -0.335839 13.53209 REMARK 350 BIOMT2 10 0.509559 -0.319656 0.798855 3.58273 REMARK 350 BIOMT3 10 0.264735 -0.825150 -0.499042 551.07512 REMARK 350 BIOMT1 11 -0.998719 0.000225 0.050590 525.85587 REMARK 350 BIOMT2 11 0.000225 -0.999960 0.008908 535.07498 REMARK 350 BIOMT3 11 0.050590 0.008908 0.998680 -15.69511 REMARK 350 BIOMT1 12 -0.808558 0.486259 0.331339 268.84867 REMARK 350 BIOMT2 12 -0.516332 -0.316267 -0.795850 705.88260 REMARK 350 BIOMT3 12 -0.282197 -0.814572 0.506791 426.94542 REMARK 350 BIOMT1 13 -0.499999 0.314024 0.807087 104.67427 REMARK 350 BIOMT2 13 -0.311453 0.804388 -0.505922 271.88592 REMARK 350 BIOMT3 13 -0.808083 -0.504330 -0.304389 702.35827 REMARK 350 BIOMT1 14 -0.499460 -0.278457 0.820367 260.21612 REMARK 350 BIOMT2 14 0.331727 0.813298 0.478021 -167.14640 REMARK 350 BIOMT3 14 -0.800311 0.510890 -0.313838 429.93224 REMARK 350 BIOMT1 15 -0.807686 -0.472395 0.352826 520.52066 REMARK 350 BIOMT2 15 0.524354 -0.301851 0.796203 -4.48662 REMARK 350 BIOMT3 15 -0.269621 0.828088 0.491503 -13.84916 REMARK 350 BIOMT1 16 -0.999773 0.021297 -0.000101 534.02885 REMARK 350 BIOMT2 16 0.021297 0.999729 -0.009451 -3.14814 REMARK 350 BIOMT3 16 -0.000101 -0.009451 -0.999955 537.23657 REMARK 350 BIOMT1 17 -0.781979 0.533460 0.322381 251.38409 REMARK 350 BIOMT2 17 0.533460 0.305286 0.788810 -168.14414 REMARK 350 BIOMT3 17 0.322381 0.788810 -0.523307 108.22975 REMARK 350 BIOMT1 18 -0.451742 0.321702 0.832128 82.89220 REMARK 350 BIOMT2 18 0.321702 -0.811234 0.488269 269.43509 REMARK 350 BIOMT3 18 0.832128 0.488269 0.262976 -158.77865 REMARK 350 BIOMT1 19 -0.465439 -0.321335 0.824688 261.40324 REMARK 350 BIOMT2 19 -0.321335 -0.806839 -0.495737 704.86993 REMARK 350 BIOMT3 19 0.824688 -0.495737 0.272278 105.20791 REMARK 350 BIOMT1 20 -0.804141 -0.506996 0.310342 540.22102 REMARK 350 BIOMT2 20 -0.506996 0.312398 -0.803345 536.40423 REMARK 350 BIOMT3 20 0.310342 -0.803345 -0.508257 535.36897 REMARK 350 BIOMT1 21 -0.014918 -0.029870 -0.999442 549.13937 REMARK 350 BIOMT2 21 0.999780 -0.015171 -0.014470 6.87575 REMARK 350 BIOMT3 21 -0.014731 -0.999439 0.030090 531.88515 REMARK 350 BIOMT1 22 0.299973 0.789900 -0.534859 119.62581 REMARK 350 BIOMT2 22 0.789900 -0.520035 -0.324995 282.22628 REMARK 350 BIOMT3 22 -0.534859 -0.324995 -0.779938 707.55180 REMARK 350 BIOMT1 23 0.818697 0.509559 0.264735 -158.79299 REMARK 350 BIOMT2 23 0.465776 -0.319656 -0.825150 449.56216 REMARK 350 BIOMT3 23 -0.335839 0.798855 -0.499042 276.69188 REMARK 350 BIOMT1 24 0.824395 -0.483471 0.294328 98.64829 REMARK 350 BIOMT2 24 0.475337 0.309049 -0.823738 277.63088 REMARK 350 BIOMT3 24 0.307291 0.818990 0.484590 -165.26084 REMARK 350 BIOMT1 25 0.309192 -0.816856 -0.486976 536.17456 REMARK 350 BIOMT2 25 0.805370 0.497231 -0.322710 4.03564 REMARK 350 BIOMT3 25 0.505747 -0.292417 0.811611 -7.54273 REMARK 350 BIOMT1 26 0.036209 0.029641 0.998905 -14.89309 REMARK 350 BIOMT2 26 0.999330 -0.006357 -0.036035 10.39356 REMARK 350 BIOMT3 26 0.005282 0.999540 -0.029851 5.25493 REMARK 350 BIOMT1 27 -0.283029 -0.800763 0.527895 420.36944 REMARK 350 BIOMT2 27 0.801129 -0.500000 -0.328927 274.86182 REMARK 350 BIOMT3 27 0.527340 0.329817 0.783029 -172.96309 REMARK 350 BIOMT1 28 -0.808558 -0.516332 -0.282197 702.33217 REMARK 350 BIOMT2 28 0.486259 -0.316267 -0.814572 440.29508 REMARK 350 BIOMT3 28 0.331339 -0.795850 0.506791 256.32405 REMARK 350 BIOMT1 29 -0.814116 0.489860 -0.311853 441.33219 REMARK 350 BIOMT2 29 0.489860 0.290928 -0.821826 278.07020 REMARK 350 BIOMT3 29 -0.311853 -0.821826 -0.476812 699.85611 REMARK 350 BIOMT1 30 -0.292021 0.827290 0.479912 -1.93740 REMARK 350 BIOMT2 30 0.806956 0.482463 -0.340664 12.37644 REMARK 350 BIOMT3 30 -0.513367 0.287786 -0.808476 544.68686 REMARK 350 BIOMT1 31 -0.035670 0.020963 -0.999144 540.99808 REMARK 350 BIOMT2 31 -0.999235 0.015267 0.035993 524.72528 REMARK 350 BIOMT3 31 0.016009 0.999664 0.020402 -11.10799 REMARK 350 BIOMT1 32 0.309525 0.816310 -0.487680 97.33643 REMARK 350 BIOMT2 32 -0.796464 0.502737 0.336007 258.77816 REMARK 350 BIOMT3 32 0.519461 0.284416 0.805771 -164.71483 REMARK 350 BIOMT1 33 0.824395 0.475337 0.307291 -162.51013 REMARK 350 BIOMT2 33 -0.483471 0.309049 0.818990 97.23898 REMARK 350 BIOMT3 33 0.294328 -0.823738 0.484590 279.74377 REMARK 350 BIOMT1 34 0.797407 -0.530744 0.287146 120.55751 REMARK 350 BIOMT2 34 -0.492802 -0.298127 0.817476 263.34940 REMARK 350 BIOMT3 34 -0.348264 -0.793367 -0.499280 708.04113 REMARK 350 BIOMT1 35 0.265858 -0.811562 -0.520275 555.34949 REMARK 350 BIOMT2 35 -0.811562 -0.479694 0.333557 527.55047 REMARK 350 BIOMT3 35 -0.520275 0.333557 -0.786164 528.28486 REMARK 350 BIOMT1 36 0.014379 -0.020734 0.999682 4.32951 REMARK 350 BIOMT2 36 -0.999875 0.006261 0.014512 533.06116 REMARK 350 BIOMT3 36 -0.006560 -0.999765 -0.020641 543.33023 REMARK 350 BIOMT1 37 -0.326469 -0.805447 0.494644 442.24220 REMARK 350 BIOMT2 37 -0.794565 0.517297 0.317915 259.18949 REMARK 350 BIOMT3 37 -0.511941 -0.289237 -0.808862 699.48844 REMARK 350 BIOMT1 38 -0.834534 -0.468564 -0.289828 698.54483 REMARK 350 BIOMT2 38 -0.468564 0.326874 0.820732 87.95954 REMARK 350 BIOMT3 38 -0.289828 0.820732 -0.492340 256.60262 REMARK 350 BIOMT1 39 -0.807686 0.524354 -0.269621 419.03589 REMARK 350 BIOMT2 39 -0.472395 -0.301851 0.828088 256.00528 REMARK 350 BIOMT3 39 0.352826 0.796203 0.491503 -173.27408 REMARK 350 BIOMT1 40 -0.283029 0.801129 0.527340 -10.01277 REMARK 350 BIOMT2 40 -0.800763 -0.500000 0.329817 531.09320 REMARK 350 BIOMT3 40 0.527895 -0.328927 0.783029 3.93334 REMARK 350 BIOMT1 41 -0.014918 0.999780 -0.014731 9.15312 REMARK 350 BIOMT2 41 -0.029870 -0.015171 -0.999439 548.09372 REMARK 350 BIOMT3 41 -0.999442 -0.014470 0.030090 532.92835 REMARK 350 BIOMT1 42 0.506492 0.328564 0.797190 -168.23268 REMARK 350 BIOMT2 42 0.295663 0.802318 -0.518526 111.95520 REMARK 350 BIOMT3 42 -0.809969 0.498328 0.309224 269.34524 REMARK 350 BIOMT1 43 0.309525 -0.796464 0.519461 261.54224 REMARK 350 BIOMT2 43 0.816310 0.502737 0.284416 -162.70658 REMARK 350 BIOMT3 43 -0.487680 0.336007 0.805771 93.24011 REMARK 350 BIOMT1 44 -0.333617 -0.820552 -0.464106 704.54355 REMARK 350 BIOMT2 44 0.812556 -0.499904 0.299749 103.68162 REMARK 350 BIOMT3 44 -0.477968 -0.277110 0.833521 247.98428 REMARK 350 BIOMT1 45 -0.534134 0.289588 -0.794254 548.55849 REMARK 350 BIOMT2 45 0.289587 -0.819989 -0.493717 542.98037 REMARK 350 BIOMT3 45 -0.794254 -0.493717 0.354123 519.72655 REMARK 350 BIOMT1 46 -0.035670 -0.999235 0.016009 543.79910 REMARK 350 BIOMT2 46 0.020963 0.015267 0.999664 -8.24778 REMARK 350 BIOMT3 46 -0.999144 0.035993 0.020402 521.87493 REMARK 350 BIOMT1 47 -0.546753 -0.302751 -0.780642 707.52465 REMARK 350 BIOMT2 47 -0.302751 -0.797774 0.521439 425.48552 REMARK 350 BIOMT3 47 -0.780642 0.521439 0.344527 245.78083 REMARK 350 BIOMT1 48 -0.333617 0.812556 -0.477968 269.32892 REMARK 350 BIOMT2 48 -0.820552 -0.499904 -0.277110 698.66462 REMARK 350 BIOMT3 48 -0.464106 0.299749 0.833521 89.20409 REMARK 350 BIOMT1 49 0.309192 0.805370 0.505747 -165.21648 REMARK 350 BIOMT2 49 -0.816856 0.497231 -0.292417 433.76528 REMARK 350 BIOMT3 49 -0.486976 -0.322710 0.811611 268.52845 REMARK 350 BIOMT1 50 0.493334 -0.314379 0.811041 4.41542 REMARK 350 BIOMT2 50 -0.296771 0.815624 0.496673 -3.13061 REMARK 350 BIOMT3 50 -0.817648 -0.485719 0.309076 535.93373 REMARK 350 BIOMT1 51 0.014379 -0.999875 -0.006560 536.49676 REMARK 350 BIOMT2 51 -0.020734 0.006261 -0.999765 539.95481 REMARK 350 BIOMT3 51 0.999682 0.014512 -0.020641 -0.84913 REMARK 350 BIOMT1 52 -0.499999 -0.311453 -0.808083 704.58054 REMARK 350 BIOMT2 52 0.314024 0.804388 -0.504330 102.64818 REMARK 350 BIOMT3 52 0.807087 -0.505922 -0.304389 266.86217 REMARK 350 BIOMT1 53 -0.292021 0.806956 -0.513367 269.07143 REMARK 350 BIOMT2 53 0.827290 0.482463 0.287786 -161.12181 REMARK 350 BIOMT3 53 0.479912 -0.340664 -0.808476 445.51210 REMARK 350 BIOMT1 54 0.350894 0.809748 0.470300 -168.17179 REMARK 350 BIOMT2 54 0.809748 -0.514624 0.281905 113.16600 REMARK 350 BIOMT3 54 0.470300 0.281905 -0.836270 288.21252 REMARK 350 BIOMT1 55 0.540260 -0.306935 0.783524 -2.89384 REMARK 350 BIOMT2 55 0.285640 -0.808933 -0.513845 546.45518 REMARK 350 BIOMT3 55 0.791536 0.501416 -0.349361 12.34611 REMARK 350 BIOMT1 56 0.036209 0.999330 0.005282 -9.87510 REMARK 350 BIOMT2 56 0.029641 -0.006357 0.999540 -4.74499 REMARK 350 BIOMT3 56 0.998905 -0.036035 -0.029851 15.40817 REMARK 350 BIOMT1 57 0.540260 0.285640 0.791536 -164.29863 REMARK 350 BIOMT2 57 -0.306935 -0.808933 0.501416 434.96685 REMARK 350 BIOMT3 57 0.783524 -0.513845 -0.349361 287.37409 REMARK 350 BIOMT1 58 0.316113 -0.823048 0.471874 279.63130 REMARK 350 BIOMT2 58 -0.823048 -0.485296 -0.295092 700.21952 REMARK 350 BIOMT3 58 0.471874 -0.295092 -0.830816 441.40602 REMARK 350 BIOMT1 59 -0.326469 -0.794565 -0.511941 708.41861 REMARK 350 BIOMT2 59 -0.805447 0.517297 -0.289237 424.44285 REMARK 350 BIOMT3 59 0.494644 0.317915 -0.808862 264.63707 REMARK 350 BIOMT1 60 -0.499460 0.331727 -0.800311 529.49381 REMARK 350 BIOMT2 60 -0.278457 0.813298 0.510890 -11.24919 REMARK 350 BIOMT3 60 0.820367 0.478021 -0.313838 1.35592 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR D 14 REMARK 465 SER D 15 REMARK 465 LEU D 16 REMARK 465 SER D 17 REMARK 465 ALA D 18 REMARK 465 SER D 19 REMARK 465 GLY D 20 REMARK 465 ASN D 21 REMARK 465 SER D 22 REMARK 465 THR D 23 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR A 196 O GLY A 209 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 182 CA - CB - CG ANGL. DEV. = 16.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 89 -83.11 -89.11 REMARK 500 TRP A 199 -169.96 -102.55 REMARK 500 THR A 205 -169.78 -124.21 REMARK 500 PHE A 210 -12.91 96.99 REMARK 500 ASN A 211 -21.48 -142.61 REMARK 500 ASN A 215 53.65 39.74 REMARK 500 VAL A 249 76.60 42.69 REMARK 500 THR A 272 -167.49 -162.18 REMARK 500 THR A 276 -0.17 67.11 REMARK 500 ASN B 30 -176.27 -170.18 REMARK 500 ASP B 57 -10.97 72.50 REMARK 500 CYS B 112 115.52 -162.02 REMARK 500 ALA B 232 -169.42 -79.26 REMARK 500 SER C 16 38.13 -97.81 REMARK 500 ASP C 18 44.80 -140.98 REMARK 500 ASN C 56 30.32 -87.39 REMARK 500 ASN C 63 45.89 -92.20 REMARK 500 GLU C 77 -73.40 -97.33 REMARK 500 THR C 78 173.23 176.76 REMARK 500 SER C 215 -168.01 -162.00 REMARK 500 ARG C 223 -55.30 -121.52 REMARK 500 TYR C 237 40.10 -103.12 REMARK 500 HIS D 12 -9.09 71.44 REMARK 500 TYR D 31 -61.21 -90.78 REMARK 500 ARG D 42 35.54 -99.71 REMARK 500 PRO D 49 45.98 -82.63 REMARK 500 PRO D 55 40.47 -88.56 REMARK 500 LYS D 62 -8.05 75.67 REMARK 500 ALA D 66 76.98 60.75 REMARK 500 LEU D 67 66.73 63.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 209 PHE A 210 -39.47 REMARK 500 PHE B 82 PRO B 83 137.86 REMARK 500 GLU C 60 ASN C 61 148.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-9686 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF ECHOVIRUS 6 COMPLEXED WITH ITS UNCOATING REMARK 900 RECEPTOR FCRN AT PH 5.5 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE OF THIS PROTEIN WAS NOT AVAILABLE AT THE UNIPROT REMARK 999 KNOWLEDGEBASE DATABASE (UNIPROTKB) AT THE TIME OF DEPOSITION. REMARK 999 AUTHORS STATE THAT THE GENEBANK ACCESSION NUMBER IS MH830353.1 FOR REMARK 999 THE PROTEIN. DBREF 6ILL A 11 283 PDB 6ILL 6ILL 11 283 DBREF 6ILL B 10 261 PDB 6ILL 6ILL 10 261 DBREF 6ILL C 1 238 PDB 6ILL 6ILL 1 238 DBREF 6ILL D 1 68 PDB 6ILL 6ILL 1 68 SEQRES 1 A 273 VAL VAL ARG VAL ALA ASP THR MET PRO SER GLY PRO SER SEQRES 2 A 273 ASN SER GLU SER ILE PRO ALA LEU THR ALA ALA GLU THR SEQRES 3 A 273 GLY HIS THR SER GLN VAL VAL PRO SER ASP THR ILE GLN SEQRES 4 A 273 THR ARG HIS VAL ARG ASN PHE HIS VAL ARG SER GLU SER SEQRES 5 A 273 SER VAL GLU ASN PHE LEU SER ARG SER ALA CYS VAL TYR SEQRES 6 A 273 ILE VAL GLU TYR LYS THR ARG ASP ASP THR PRO ASP LYS SEQRES 7 A 273 MET TYR ASP SER TRP VAL ILE ASN THR ARG GLN VAL ALA SEQRES 8 A 273 GLN LEU ARG ARG LYS LEU GLU PHE PHE THR TYR VAL ARG SEQRES 9 A 273 PHE ASP VAL GLU VAL THR PHE VAL ILE THR SER VAL GLN SEQRES 10 A 273 ASP ASP SER THR ARG GLN ASN THR ASP THR PRO ALA LEU SEQRES 11 A 273 THR HIS GLN ILE MET TYR VAL PRO PRO GLY GLY PRO ILE SEQRES 12 A 273 PRO GLN ALA VAL ASP ASP TYR ASN TRP GLN THR SER THR SEQRES 13 A 273 ASN PRO SER VAL PHE TRP THR GLU GLY ASN ALA PRO PRO SEQRES 14 A 273 ARG MET SER ILE PRO PHE MET SER VAL GLY ASN ALA TYR SEQRES 15 A 273 SER ASN PHE TYR ASP GLY TRP SER HIS PHE SER GLN THR SEQRES 16 A 273 GLY VAL TYR GLY PHE ASN THR LEU ASN ASN MET GLY LYS SEQRES 17 A 273 LEU TYR PHE ARG HIS VAL ASN ASP LYS THR ILE SER PRO SEQRES 18 A 273 ILE THR SER LYS VAL ARG ILE TYR PHE LYS PRO LYS HIS SEQRES 19 A 273 VAL LYS ALA TRP VAL PRO ARG PRO PRO ARG LEU CYS GLU SEQRES 20 A 273 TYR THR HIS LYS ASP ASN VAL ASP PHE GLU PRO LYS GLY SEQRES 21 A 273 VAL THR THR SER ARG THR GLN LEU THR ILE SER ASN SER SEQRES 1 B 252 SER ASP ARG VAL ARG SER ILE THR LEU GLY ASN SER THR SEQRES 2 B 252 ILE THR THR GLN GLU SER ALA ASN VAL VAL VAL GLY TYR SEQRES 3 B 252 GLY VAL TRP PRO ASP TYR LEU SER ASP GLU GLU ALA THR SEQRES 4 B 252 ALA GLU ASP GLN PRO THR GLN PRO ASP VAL ALA THR CYS SEQRES 5 B 252 ARG PHE TYR THR LEU ASP SER VAL SER TRP MET LYS GLU SEQRES 6 B 252 SER GLN GLY TRP TRP TRP LYS PHE PRO ASP ALA LEU ARG SEQRES 7 B 252 ASP MET GLY LEU PHE GLY GLN ASN MET GLN TYR HIS TYR SEQRES 8 B 252 LEU GLY ARG SER GLY TYR THR ILE HIS VAL GLN CYS ASN SEQRES 9 B 252 ALA SER LYS PHE HIS GLN GLY CYS LEU LEU VAL VAL CYS SEQRES 10 B 252 VAL PRO GLU ALA GLU MET GLY ALA ALA ASN ILE ASN GLU SEQRES 11 B 252 LYS ILE ASN ARG GLU HIS LEU SER ASN GLY GLU VAL ALA SEQRES 12 B 252 ASN THR PHE SER GLY THR LYS SER SER ASN THR ASN ASP SEQRES 13 B 252 VAL GLN GLN ALA VAL PHE ASN ALA GLY MET GLY VAL ALA SEQRES 14 B 252 VAL GLY ASN LEU THR ILE PHE PRO HIS GLN TRP ILE ASN SEQRES 15 B 252 LEU ARG THR ASN ASN CYS ALA THR ILE VAL MET PRO TYR SEQRES 16 B 252 ILE ASN SER VAL PRO MET ASP ASN MET PHE ARG HIS TYR SEQRES 17 B 252 ASN PHE THR LEU MET ILE ILE PRO PHE ALA LYS LEU ASP SEQRES 18 B 252 TYR ALA ALA GLY SER SER THR TYR ILE PRO ILE THR VAL SEQRES 19 B 252 THR VAL ALA PRO MET CYS ALA GLU TYR ASN GLY LEU ARG SEQRES 20 B 252 LEU ALA GLY HIS GLN SEQRES 1 C 238 GLY LEU PRO VAL MET ASN THR PRO GLY SER ASN GLN PHE SEQRES 2 C 238 LEU THR SER ASP ASP TYR GLN SER PRO THR ALA MET PRO SEQRES 3 C 238 GLN PHE ASP VAL THR PRO GLU MET ASN ILE PRO GLY GLU SEQRES 4 C 238 VAL LYS ASN LEU MET GLU ILE ALA GLU VAL ASP SER VAL SEQRES 5 C 238 VAL PRO VAL ASN ASN VAL ASN GLU ASN VAL ASN SER LEU SEQRES 6 C 238 GLU ALA TYR ARG ILE PRO VAL HIS SER VAL THR GLU THR SEQRES 7 C 238 GLY ALA GLN VAL PHE GLY PHE THR LEU GLN PRO GLY ALA SEQRES 8 C 238 ASP THR VAL MET GLU ARG THR LEU LEU GLY GLU ILE LEU SEQRES 9 C 238 ASN TYR TYR ALA ASN TRP SER GLY SER ILE LYS LEU THR SEQRES 10 C 238 PHE MET TYR CYS GLY SER ALA MET ALA THR GLY LYS PHE SEQRES 11 C 238 LEU LEU ALA TYR SER PRO PRO GLY ALA GLY VAL PRO LYS SEQRES 12 C 238 ASN ARG ARG GLU ALA MET LEU GLY THR HIS ILE ILE TRP SEQRES 13 C 238 ASP ILE GLY LEU GLN SER SER CYS VAL LEU CYS VAL PRO SEQRES 14 C 238 TRP ILE SER GLN THR HIS TYR ARG PHE VAL SER LYS ASP SEQRES 15 C 238 ILE TYR THR ASP ALA GLY PHE ILE THR CYS TRP TYR GLN SEQRES 16 C 238 THR SER ILE VAL VAL PRO ALA GLU VAL GLN ASN GLN SER SEQRES 17 C 238 VAL ILE LEU CYS PHE VAL SER ALA CYS ASN ASP PHE SER SEQRES 18 C 238 VAL ARG LEU LEU ARG ASP SER PRO PHE VAL ARG GLN THR SEQRES 19 C 238 ALA PHE TYR GLN SEQRES 1 D 68 GLY ALA GLN VAL SER THR GLN LYS THR GLY ALA HIS GLU SEQRES 2 D 68 THR SER LEU SER ALA SER GLY ASN SER THR ILE HIS TYR SEQRES 3 D 68 THR ASN ILE ASN TYR TYR LYS ASP ALA ALA SER ASN SER SEQRES 4 D 68 ALA ASN ARG GLN ASP PHE THR GLN ASP PRO GLY LYS PHE SEQRES 5 D 68 THR GLU PRO VAL LYS ASP ILE MET VAL LYS SER LEU PRO SEQRES 6 D 68 ALA LEU ASN HELIX 1 AA1 ALA A 33 GLY A 37 5 5 HELIX 2 AA2 VAL A 43 THR A 47 5 5 HELIX 3 AA3 SER A 63 SER A 69 1 7 HELIX 4 AA4 VAL A 100 GLU A 108 1 9 HELIX 5 AA5 MET B 89 TYR B 98 1 10 HELIX 6 AA6 ASN B 142 SER B 147 1 6 HELIX 7 AA7 ALA B 178 LEU B 182 5 5 HELIX 8 AA8 LEU C 43 GLU C 48 1 6 HELIX 9 AA9 LEU C 65 ARG C 69 5 5 HELIX 10 AB1 THR C 98 TYR C 106 1 9 HELIX 11 AB2 ASN C 144 MET C 149 1 6 SHEET 1 AA1 4 ALA A 72 LYS A 80 0 SHEET 2 AA1 4 ILE A 232 PHE A 240 -1 O PHE A 240 N ALA A 72 SHEET 3 AA1 4 TYR A 112 GLN A 127 -1 N VAL A 126 O THR A 233 SHEET 4 AA1 4 TYR A 192 SER A 193 -1 O TYR A 192 N VAL A 113 SHEET 1 AA2 4 ARG A 180 ILE A 183 0 SHEET 2 AA2 4 TYR A 112 GLN A 127 -1 N VAL A 117 O ILE A 183 SHEET 3 AA2 4 PRO A 242 TRP A 248 -1 O TRP A 248 N TYR A 112 SHEET 4 AA2 4 GLU C 39 VAL C 40 -1 O VAL C 40 N ALA A 247 SHEET 1 AA3 4 ASP A 91 VAL A 94 0 SHEET 2 AA3 4 LYS A 218 HIS A 223 -1 O LEU A 219 N TRP A 93 SHEET 3 AA3 4 THR A 141 ILE A 144 -1 N GLN A 143 O ARG A 222 SHEET 4 AA3 4 PHE A 171 THR A 173 -1 O TRP A 172 N HIS A 142 SHEET 1 AA4 2 ARG B 14 THR B 17 0 SHEET 2 AA4 2 THR B 22 THR B 25 -1 O THR B 25 N ARG B 14 SHEET 1 AA5 5 VAL B 31 VAL B 33 0 SHEET 2 AA5 5 CYS B 197 VAL B 201 1 O VAL B 201 N VAL B 32 SHEET 3 AA5 5 ILE B 108 GLN B 111 -1 N ILE B 108 O ILE B 200 SHEET 4 AA5 5 PRO B 240 VAL B 245 -1 O THR B 244 N HIS B 109 SHEET 5 AA5 5 TYR B 64 THR B 65 -1 N TYR B 64 O VAL B 245 SHEET 1 AA6 5 VAL B 31 VAL B 33 0 SHEET 2 AA6 5 CYS B 197 VAL B 201 1 O VAL B 201 N VAL B 32 SHEET 3 AA6 5 ILE B 108 GLN B 111 -1 N ILE B 108 O ILE B 200 SHEET 4 AA6 5 PRO B 240 VAL B 245 -1 O THR B 244 N HIS B 109 SHEET 5 AA6 5 VAL B 69 SER B 70 -1 N VAL B 69 O ILE B 241 SHEET 1 AA7 5 ASN B 153 THR B 154 0 SHEET 2 AA7 5 TRP B 78 LYS B 81 -1 N TRP B 79 O ASN B 153 SHEET 3 AA7 5 PHE B 219 ILE B 223 -1 O LEU B 221 N TRP B 80 SHEET 4 AA7 5 VAL B 124 PRO B 128 -1 N VAL B 125 O MET B 222 SHEET 5 AA7 5 HIS B 187 GLN B 188 -1 O GLN B 188 N VAL B 124 SHEET 1 AA8 2 LEU B 101 GLY B 105 0 SHEET 2 AA8 2 MET B 248 ASN B 253 -1 O MET B 248 N GLY B 105 SHEET 1 AA9 2 GLN B 119 CYS B 121 0 SHEET 2 AA9 2 ALA B 227 ASP B 230 -1 O ALA B 227 N CYS B 121 SHEET 1 AB1 4 SER C 51 VAL C 52 0 SHEET 2 AB1 4 PHE C 213 ALA C 216 -1 O VAL C 214 N SER C 51 SHEET 3 AB1 4 ILE C 114 MET C 119 -1 N THR C 117 O PHE C 213 SHEET 4 AB1 4 SER C 163 VAL C 168 -1 O LEU C 166 N LEU C 116 SHEET 1 AB2 2 ILE C 70 VAL C 72 0 SHEET 2 AB2 2 SER C 208 ILE C 210 -1 O ILE C 210 N ILE C 70 SHEET 1 AB3 4 GLN C 81 THR C 86 0 SHEET 2 AB3 4 PHE C 189 TYR C 194 -1 O CYS C 192 N PHE C 83 SHEET 3 AB3 4 LYS C 129 SER C 135 -1 N LEU C 131 O TRP C 193 SHEET 4 AB3 4 ILE C 155 ASP C 157 -1 O TRP C 156 N PHE C 130 SHEET 1 AB4 2 TRP C 110 SER C 111 0 SHEET 2 AB4 2 SER C 221 VAL C 222 -1 O SER C 221 N SER C 111 SHEET 1 AB5 2 ALA D 2 SER D 5 0 SHEET 2 AB5 2 TYR D 26 ILE D 29 -1 O ASN D 28 N GLN D 3 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000