data_6JNM # _entry.id 6JNM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6JNM pdb_00006jnm 10.2210/pdb6jnm/pdb WWPDB D_1300011433 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6JNM _pdbx_database_status.recvd_initial_deposition_date 2019-03-17 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yao, Q.Q.' 1 ? 'Wu, B.X.' 2 ? 'Ma, J.B.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 10 _citation.language ? _citation.page_first 2063 _citation.page_last 2063 _citation.title 'DNA methylation repels targeting of Arabidopsis REF6.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-019-10026-1 _citation.pdbx_database_id_PubMed 31048693 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Qiu, Q.' 1 0000-0002-0933-4707 primary 'Mei, H.' 2 ? primary 'Deng, X.' 3 ? primary 'He, K.' 4 ? primary 'Wu, B.' 5 ? primary 'Yao, Q.' 6 ? primary 'Zhang, J.' 7 ? primary 'Lu, F.' 8 0000-0002-8321-4818 primary 'Ma, J.' 9 0000-0002-0232-1786 primary 'Cao, X.' 10 0000-0001-9871-0753 # _cell.entry_id 6JNM _cell.length_a 88.516 _cell.length_b 88.516 _cell.length_c 72.330 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JNM _symmetry.space_group_name_H-M 'P 43' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Lysine-specific demethylase REF6' 12026.109 2 1.14.11.- ? ? ? 2 polymer syn ;DNA (5'-D(*TP*TP*CP*TP*(5CM)P*TP*GP*TP*TP*TP*TP*G)-3') ; 3639.387 2 ? ? ? 5CM 3 polymer syn ;DNA (5'-D(*CP*AP*AP*AP*AP*CP*AP*GP*AP*GP*AP*A)-3') ; 3697.472 2 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 6 ? ? ? ? 5 water nat water 18.015 168 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Jumonji domain-containing protein 12,Lysine-specific histone demethylase REF6,Protein RELATIVE OF EARLY FLOWERING 6' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;LMLHKRNICPIKGCGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRF VSDFSRHKRKTGHSVKKTNKR ; ;LMLHKRNICPIKGCGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRF VSDFSRHKRKTGHSVKKTNKR ; A,B ? 2 polydeoxyribonucleotide no yes '(DT)(DT)(DC)(DT)(5CM)(DT)(DG)(DT)(DT)(DT)(DT)(DG)' TTCTCTGTTTTG D,F ? 3 polydeoxyribonucleotide no no '(DC)(DA)(DA)(DA)(DA)(DC)(DA)(DG)(DA)(DG)(DA)(DA)' CAAAACAGAGAA C,E ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 MET n 1 3 LEU n 1 4 HIS n 1 5 LYS n 1 6 ARG n 1 7 ASN n 1 8 ILE n 1 9 CYS n 1 10 PRO n 1 11 ILE n 1 12 LYS n 1 13 GLY n 1 14 CYS n 1 15 GLY n 1 16 LYS n 1 17 ASN n 1 18 PHE n 1 19 PHE n 1 20 SER n 1 21 HIS n 1 22 LYS n 1 23 TYR n 1 24 LEU n 1 25 VAL n 1 26 GLN n 1 27 HIS n 1 28 GLN n 1 29 ARG n 1 30 VAL n 1 31 HIS n 1 32 SER n 1 33 ASP n 1 34 ASP n 1 35 ARG n 1 36 PRO n 1 37 LEU n 1 38 LYS n 1 39 CYS n 1 40 PRO n 1 41 TRP n 1 42 LYS n 1 43 GLY n 1 44 CYS n 1 45 LYS n 1 46 MET n 1 47 THR n 1 48 PHE n 1 49 LYS n 1 50 TRP n 1 51 ALA n 1 52 TRP n 1 53 SER n 1 54 ARG n 1 55 THR n 1 56 GLU n 1 57 HIS n 1 58 ILE n 1 59 ARG n 1 60 VAL n 1 61 HIS n 1 62 THR n 1 63 GLY n 1 64 ALA n 1 65 ARG n 1 66 PRO n 1 67 TYR n 1 68 VAL n 1 69 CYS n 1 70 ALA n 1 71 GLU n 1 72 PRO n 1 73 ASP n 1 74 CYS n 1 75 GLY n 1 76 GLN n 1 77 THR n 1 78 PHE n 1 79 ARG n 1 80 PHE n 1 81 VAL n 1 82 SER n 1 83 ASP n 1 84 PHE n 1 85 SER n 1 86 ARG n 1 87 HIS n 1 88 LYS n 1 89 ARG n 1 90 LYS n 1 91 THR n 1 92 GLY n 1 93 HIS n 1 94 SER n 1 95 VAL n 1 96 LYS n 1 97 LYS n 1 98 THR n 1 99 ASN n 1 100 LYS n 1 101 ARG n 2 1 DT n 2 2 DT n 2 3 DC n 2 4 DT n 2 5 5CM n 2 6 DT n 2 7 DG n 2 8 DT n 2 9 DT n 2 10 DT n 2 11 DT n 2 12 DG n 3 1 DC n 3 2 DA n 3 3 DA n 3 4 DA n 3 5 DA n 3 6 DC n 3 7 DA n 3 8 DG n 3 9 DA n 3 10 DG n 3 11 DA n 3 12 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 101 _entity_src_gen.gene_src_common_name 'Mouse-ear cress' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'REF6, JMJ12, PKDM9A, At3g48430, T29H11_50' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Arabidopsis thaliana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3702 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 12 'synthetic construct' ? 32630 ? 3 1 sample 1 12 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP REF6_ARATH Q9STM3 ? 1 ;LMLHKRNICPIKGCGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRF VSDFSRHKRKTGHSVKKTNKR ; 1260 2 PDB 6JNM 6JNM ? 2 ? 1 3 PDB 6JNM 6JNM ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6JNM A 1 ? 101 ? Q9STM3 1260 ? 1360 ? 1260 1360 2 2 6JNM D 1 ? 12 ? 6JNM 1 ? 12 ? 1 12 3 3 6JNM C 1 ? 12 ? 6JNM 1 ? 12 ? 1 12 4 1 6JNM B 1 ? 101 ? Q9STM3 1260 ? 1360 ? 1260 1360 5 2 6JNM F 1 ? 12 ? 6JNM 1 ? 12 ? 1 12 6 3 6JNM E 1 ? 12 ? 6JNM 1 ? 12 ? 1 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6JNM _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.66 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 66.38 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '16% PEG 3,350, 0.03 M citrate acid, 0.07 M Bis-Tris propane pH 7.6' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-06-17 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97853 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97853 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 6JNM _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.000 _reflns.d_resolution_high 2.050 _reflns.number_obs 35297 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.10200 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 4.2410 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 12.30 _reflns.pdbx_CC_half ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_Rrim_I_all ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.05 _reflns_shell.d_res_low 2.12 _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs 1.02000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 3546 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 6JNM _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 31212 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 2.05 _refine.ls_percent_reflns_obs 93.2 _refine.ls_R_factor_obs 0.201 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.200 _refine.ls_R_factor_R_free 0.228 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1666 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.943 _refine.correlation_coeff_Fo_to_Fc_free 0.924 _refine.B_iso_mean 28.27 _refine.aniso_B[1][1] -0.23000 _refine.aniso_B[2][2] -0.23000 _refine.aniso_B[3][3] 0.46000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS ; _refine.pdbx_starting_model 6JNL _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.152 _refine.pdbx_overall_ESU_R_Free 0.141 _refine.overall_SU_ML 0.102 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.905 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1478 _refine_hist.pdbx_number_atoms_nucleic_acid 974 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 168 _refine_hist.number_atoms_total 2626 _refine_hist.d_res_high 2.05 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.024 0.016 ? 2622 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1924 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.092 1.600 ? 3736 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.410 3.000 ? 4484 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.535 5.000 ? 176 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.586 20.526 ? 76 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.738 15.000 ? 264 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.956 15.000 ? 18 'X-RAY DIFFRACTION' ? r_chiral_restr 0.114 0.200 ? 340 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.016 0.021 ? 2242 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 592 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.722 2.820 ? 710 'X-RAY DIFFRACTION' ? r_mcbond_other 2.713 2.815 ? 709 'X-RAY DIFFRACTION' ? r_mcangle_it 3.927 4.192 ? 884 'X-RAY DIFFRACTION' ? r_mcangle_other 3.926 4.197 ? 885 'X-RAY DIFFRACTION' ? r_scbond_it 3.362 2.745 ? 1912 'X-RAY DIFFRACTION' ? r_scbond_other 3.361 2.745 ? 1913 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 4.837 4.033 ? 2853 'X-RAY DIFFRACTION' ? r_long_range_B_refined 6.350 27.721 ? 3412 'X-RAY DIFFRACTION' ? r_long_range_B_other 6.356 27.603 ? 3381 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.05 _refine_ls_shell.d_res_low 2.10 _refine_ls_shell.number_reflns_R_work 963 _refine_ls_shell.R_factor_R_work 0.2820 _refine_ls_shell.percent_reflns_obs 38.47 _refine_ls_shell.R_factor_R_free 0.3150 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 40 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 6JNM _struct.title 'REF6 ZnF2-4-NAC004-mC3 complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6JNM _struct_keywords.text 'REF6, zinc finger, 5mC, DNA complex, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 5 ? N N N 5 ? O N N 5 ? P N N 5 ? Q N N 5 ? R N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 20 ? GLN A 28 ? SER A 1279 GLN A 1287 1 ? 9 HELX_P HELX_P2 AA2 ARG A 29 ? SER A 32 ? ARG A 1288 SER A 1291 5 ? 4 HELX_P HELX_P3 AA3 TRP A 50 ? GLY A 63 ? TRP A 1309 GLY A 1322 1 ? 14 HELX_P HELX_P4 AA4 PHE A 80 ? GLY A 92 ? PHE A 1339 GLY A 1351 1 ? 13 HELX_P HELX_P5 AA5 SER D 20 ? GLN D 28 ? SER B 1279 GLN B 1287 1 ? 9 HELX_P HELX_P6 AA6 ARG D 29 ? SER D 32 ? ARG B 1288 SER B 1291 5 ? 4 HELX_P HELX_P7 AA7 TRP D 50 ? GLY D 63 ? TRP B 1309 GLY B 1322 1 ? 14 HELX_P HELX_P8 AA8 PHE D 80 ? GLY D 92 ? PHE B 1339 GLY B 1351 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 A CYS 14 SG ? ? A CYS 1268 A CYS 1273 1_555 ? ? ? ? ? ? ? 2.541 ? ? disulf2 disulf ? ? A CYS 69 SG ? ? ? 1_555 A CYS 74 SG ? ? A CYS 1328 A CYS 1333 1_555 ? ? ? ? ? ? ? 2.428 ? ? disulf3 disulf ? ? D CYS 9 SG ? ? ? 1_555 D CYS 14 SG ? ? B CYS 1268 B CYS 1273 1_555 ? ? ? ? ? ? ? 2.447 ? ? disulf4 disulf ? ? D CYS 69 SG ? ? ? 1_555 D CYS 74 SG ? ? B CYS 1328 B CYS 1333 1_555 ? ? ? ? ? ? ? 2.419 ? ? covale1 covale both ? B DT 4 "O3'" ? ? ? 1_555 B 5CM 5 P ? ? D DT 4 D 5CM 5 1_555 ? ? ? ? ? ? ? 1.567 ? ? covale2 covale both ? B 5CM 5 "O3'" ? ? ? 1_555 B DT 6 P ? ? D 5CM 5 D DT 6 1_555 ? ? ? ? ? ? ? 1.646 ? ? covale3 covale both ? E DT 4 "O3'" ? ? ? 1_555 E 5CM 5 P ? ? F DT 4 F 5CM 5 1_555 ? ? ? ? ? ? ? 1.571 ? ? covale4 covale both ? E 5CM 5 "O3'" ? ? ? 1_555 E DT 6 P ? ? F 5CM 5 F DT 6 1_555 ? ? ? ? ? ? ? 1.608 ? ? metalc1 metalc ? ? A CYS 9 SG ? ? ? 1_555 G ZN . ZN ? ? A CYS 1268 A ZN 1401 1_555 ? ? ? ? ? ? ? 2.004 ? ? metalc2 metalc ? ? A HIS 27 NE2 ? ? ? 1_555 G ZN . ZN ? ? A HIS 1286 A ZN 1401 1_555 ? ? ? ? ? ? ? 2.039 ? ? metalc3 metalc ? ? A HIS 31 NE2 ? ? ? 1_555 G ZN . ZN ? ? A HIS 1290 A ZN 1401 1_555 ? ? ? ? ? ? ? 1.845 ? ? metalc4 metalc ? ? A CYS 39 SG ? ? ? 1_555 H ZN . ZN ? ? A CYS 1298 A ZN 1402 1_555 ? ? ? ? ? ? ? 2.259 ? ? metalc5 metalc ? ? A CYS 44 SG ? ? ? 1_555 H ZN . ZN ? ? A CYS 1303 A ZN 1402 1_555 ? ? ? ? ? ? ? 2.222 ? ? metalc6 metalc ? ? A HIS 57 NE2 ? ? ? 1_555 H ZN . ZN ? ? A HIS 1316 A ZN 1402 1_555 ? ? ? ? ? ? ? 2.146 ? ? metalc7 metalc ? ? A HIS 61 NE2 ? ? ? 1_555 H ZN . ZN ? ? A HIS 1320 A ZN 1402 1_555 ? ? ? ? ? ? ? 2.015 ? ? metalc8 metalc ? ? A HIS 87 NE2 ? ? ? 1_555 I ZN . ZN ? ? A HIS 1346 A ZN 1403 1_555 ? ? ? ? ? ? ? 1.977 ? ? metalc9 metalc ? ? A HIS 93 ND1 ? ? ? 1_555 I ZN . ZN ? ? A HIS 1352 A ZN 1403 1_555 ? ? ? ? ? ? ? 2.338 ? ? metalc10 metalc ? ? D CYS 9 SG ? ? ? 1_555 J ZN . ZN ? ? B CYS 1268 B ZN 1401 1_555 ? ? ? ? ? ? ? 2.232 ? ? metalc11 metalc ? ? D HIS 27 NE2 ? ? ? 1_555 J ZN . ZN ? ? B HIS 1286 B ZN 1401 1_555 ? ? ? ? ? ? ? 1.998 ? ? metalc12 metalc ? ? D HIS 31 NE2 ? ? ? 1_555 J ZN . ZN ? ? B HIS 1290 B ZN 1401 1_555 ? ? ? ? ? ? ? 1.908 ? ? metalc13 metalc ? ? D CYS 39 SG ? ? ? 1_555 K ZN . ZN ? ? B CYS 1298 B ZN 1402 1_555 ? ? ? ? ? ? ? 2.246 ? ? metalc14 metalc ? ? D CYS 44 SG ? ? ? 1_555 K ZN . ZN ? ? B CYS 1303 B ZN 1402 1_555 ? ? ? ? ? ? ? 2.214 ? ? metalc15 metalc ? ? D HIS 57 NE2 ? ? ? 1_555 K ZN . ZN ? ? B HIS 1316 B ZN 1402 1_555 ? ? ? ? ? ? ? 2.112 ? ? metalc16 metalc ? ? D HIS 61 NE2 ? ? ? 1_555 K ZN . ZN ? ? B HIS 1320 B ZN 1402 1_555 ? ? ? ? ? ? ? 2.058 ? ? metalc17 metalc ? ? D HIS 87 NE2 ? ? ? 1_555 L ZN . ZN ? ? B HIS 1346 B ZN 1403 1_555 ? ? ? ? ? ? ? 2.005 ? ? metalc18 metalc ? ? D HIS 93 ND1 ? ? ? 1_555 L ZN . ZN ? ? B HIS 1352 B ZN 1403 1_555 ? ? ? ? ? ? ? 2.225 ? ? hydrog1 hydrog ? ? B DT 1 N3 ? ? ? 1_555 C DA 12 N1 ? ? D DT 1 C DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DT 1 O4 ? ? ? 1_555 C DA 12 N6 ? ? D DT 1 C DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DT 2 N3 ? ? ? 1_555 C DA 11 N1 ? ? D DT 2 C DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DT 2 O4 ? ? ? 1_555 C DA 11 N6 ? ? D DT 2 C DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 3 N3 ? ? ? 1_555 C DG 10 N1 ? ? D DC 3 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 3 N4 ? ? ? 1_555 C DG 10 O6 ? ? D DC 3 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 3 O2 ? ? ? 1_555 C DG 10 N2 ? ? D DC 3 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DT 4 N3 ? ? ? 1_555 C DA 9 N1 ? ? D DT 4 C DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DT 4 O4 ? ? ? 1_555 C DA 9 N6 ? ? D DT 4 C DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B 5CM 5 N3 ? ? ? 1_555 C DG 8 N1 ? ? D 5CM 5 C DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B 5CM 5 N4 ? ? ? 1_555 C DG 8 O6 ? ? D 5CM 5 C DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B 5CM 5 O2 ? ? ? 1_555 C DG 8 N2 ? ? D 5CM 5 C DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DT 6 N3 ? ? ? 1_555 C DA 7 N1 ? ? D DT 6 C DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DT 6 O4 ? ? ? 1_555 C DA 7 N6 ? ? D DT 6 C DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DG 7 N1 ? ? ? 1_555 C DC 6 N3 ? ? D DG 7 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DG 7 N2 ? ? ? 1_555 C DC 6 O2 ? ? D DG 7 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 7 O6 ? ? ? 1_555 C DC 6 N4 ? ? D DG 7 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DT 8 N3 ? ? ? 1_555 C DA 5 N1 ? ? D DT 8 C DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DT 8 O4 ? ? ? 1_555 C DA 5 N6 ? ? D DT 8 C DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DT 9 N3 ? ? ? 1_555 C DA 4 N1 ? ? D DT 9 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DT 9 O4 ? ? ? 1_555 C DA 4 N6 ? ? D DT 9 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DT 10 N3 ? ? ? 1_555 C DA 3 N1 ? ? D DT 10 C DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DT 10 O4 ? ? ? 1_555 C DA 3 N6 ? ? D DT 10 C DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DT 11 N3 ? ? ? 1_555 C DA 2 N1 ? ? D DT 11 C DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DT 11 O4 ? ? ? 1_555 C DA 2 N6 ? ? D DT 11 C DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DG 12 N1 ? ? ? 1_555 C DC 1 N3 ? ? D DG 12 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DG 12 N2 ? ? ? 1_555 C DC 1 O2 ? ? D DG 12 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DG 12 O6 ? ? ? 1_555 C DC 1 N4 ? ? D DG 12 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? E DT 1 N3 ? ? ? 1_555 F DA 12 N1 ? ? F DT 1 E DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? E DT 1 O4 ? ? ? 1_555 F DA 12 N6 ? ? F DT 1 E DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? E DT 2 N3 ? ? ? 1_555 F DA 11 N1 ? ? F DT 2 E DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? E DT 2 O4 ? ? ? 1_555 F DA 11 N6 ? ? F DT 2 E DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? E DC 3 N3 ? ? ? 1_555 F DG 10 N1 ? ? F DC 3 E DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? E DC 3 N4 ? ? ? 1_555 F DG 10 O6 ? ? F DC 3 E DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? E DC 3 O2 ? ? ? 1_555 F DG 10 N2 ? ? F DC 3 E DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? E DT 4 N3 ? ? ? 1_555 F DA 9 N1 ? ? F DT 4 E DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? E DT 4 O4 ? ? ? 1_555 F DA 9 N6 ? ? F DT 4 E DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? E 5CM 5 N3 ? ? ? 1_555 F DG 8 N1 ? ? F 5CM 5 E DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? E 5CM 5 N4 ? ? ? 1_555 F DG 8 O6 ? ? F 5CM 5 E DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? E 5CM 5 O2 ? ? ? 1_555 F DG 8 N2 ? ? F 5CM 5 E DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? E DT 6 N3 ? ? ? 1_555 F DA 7 N1 ? ? F DT 6 E DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? E DT 6 O4 ? ? ? 1_555 F DA 7 N6 ? ? F DT 6 E DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? E DG 7 N1 ? ? ? 1_555 F DC 6 N3 ? ? F DG 7 E DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? E DG 7 N2 ? ? ? 1_555 F DC 6 O2 ? ? F DG 7 E DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? E DG 7 O6 ? ? ? 1_555 F DC 6 N4 ? ? F DG 7 E DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? E DT 8 N3 ? ? ? 1_555 F DA 5 N1 ? ? F DT 8 E DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? E DT 8 O4 ? ? ? 1_555 F DA 5 N6 ? ? F DT 8 E DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? E DT 9 N3 ? ? ? 1_555 F DA 4 N1 ? ? F DT 9 E DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? E DT 9 O4 ? ? ? 1_555 F DA 4 N6 ? ? F DT 9 E DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? E DT 10 N3 ? ? ? 1_555 F DA 3 N1 ? ? F DT 10 E DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? E DT 10 O4 ? ? ? 1_555 F DA 3 N6 ? ? F DT 10 E DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? E DT 11 N3 ? ? ? 1_555 F DA 2 N1 ? ? F DT 11 E DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? E DT 11 O4 ? ? ? 1_555 F DA 2 N6 ? ? F DT 11 E DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? E DG 12 N1 ? ? ? 1_555 F DC 1 N3 ? ? F DG 12 E DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? E DG 12 N2 ? ? ? 1_555 F DC 1 O2 ? ? F DG 12 E DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? E DG 12 O6 ? ? ? 1_555 F DC 1 N4 ? ? F DG 12 E DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? AA3 ? 2 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 37 ? LYS A 38 ? LEU A 1296 LYS A 1297 AA1 2 THR A 47 ? PHE A 48 ? THR A 1306 PHE A 1307 AA2 1 TYR A 67 ? VAL A 68 ? TYR A 1326 VAL A 1327 AA2 2 THR A 77 ? PHE A 78 ? THR A 1336 PHE A 1337 AA3 1 LEU D 37 ? LYS D 38 ? LEU B 1296 LYS B 1297 AA3 2 THR D 47 ? PHE D 48 ? THR B 1306 PHE B 1307 AA4 1 TYR D 67 ? VAL D 68 ? TYR B 1326 VAL B 1327 AA4 2 THR D 77 ? PHE D 78 ? THR B 1336 PHE B 1337 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 37 ? N LEU A 1296 O PHE A 48 ? O PHE A 1307 AA2 1 2 N TYR A 67 ? N TYR A 1326 O PHE A 78 ? O PHE A 1337 AA3 1 2 N LEU D 37 ? N LEU B 1296 O PHE D 48 ? O PHE B 1307 AA4 1 2 N TYR D 67 ? N TYR B 1326 O PHE D 78 ? O PHE B 1337 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 1401 ? 4 'binding site for residue ZN A 1401' AC2 Software A ZN 1402 ? 4 'binding site for residue ZN A 1402' AC3 Software A ZN 1403 ? 4 'binding site for residue ZN A 1403' AC4 Software B ZN 1401 ? 4 'binding site for residue ZN B 1401' AC5 Software B ZN 1402 ? 4 'binding site for residue ZN B 1402' AC6 Software B ZN 1403 ? 4 'binding site for residue ZN B 1403' AC7 Software F DT 4 ? 20 'binding site for Di-nucleotide DT F 4 and 5CM F 5' AC8 Software F 5CM 5 ? 23 'binding site for Di-nucleotide 5CM F 5 and DT F 6' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 9 ? CYS A 1268 . ? 1_555 ? 2 AC1 4 CYS A 14 ? CYS A 1273 . ? 1_555 ? 3 AC1 4 HIS A 27 ? HIS A 1286 . ? 1_555 ? 4 AC1 4 HIS A 31 ? HIS A 1290 . ? 1_555 ? 5 AC2 4 CYS A 39 ? CYS A 1298 . ? 1_555 ? 6 AC2 4 CYS A 44 ? CYS A 1303 . ? 1_555 ? 7 AC2 4 HIS A 57 ? HIS A 1316 . ? 1_555 ? 8 AC2 4 HIS A 61 ? HIS A 1320 . ? 1_555 ? 9 AC3 4 CYS A 69 ? CYS A 1328 . ? 1_555 ? 10 AC3 4 CYS A 74 ? CYS A 1333 . ? 1_555 ? 11 AC3 4 HIS A 87 ? HIS A 1346 . ? 1_555 ? 12 AC3 4 HIS A 93 ? HIS A 1352 . ? 1_555 ? 13 AC4 4 CYS D 9 ? CYS B 1268 . ? 1_555 ? 14 AC4 4 CYS D 14 ? CYS B 1273 . ? 1_555 ? 15 AC4 4 HIS D 27 ? HIS B 1286 . ? 1_555 ? 16 AC4 4 HIS D 31 ? HIS B 1290 . ? 1_555 ? 17 AC5 4 CYS D 39 ? CYS B 1298 . ? 1_555 ? 18 AC5 4 CYS D 44 ? CYS B 1303 . ? 1_555 ? 19 AC5 4 HIS D 57 ? HIS B 1316 . ? 1_555 ? 20 AC5 4 HIS D 61 ? HIS B 1320 . ? 1_555 ? 21 AC6 4 CYS D 69 ? CYS B 1328 . ? 1_555 ? 22 AC6 4 CYS D 74 ? CYS B 1333 . ? 1_555 ? 23 AC6 4 HIS D 87 ? HIS B 1346 . ? 1_555 ? 24 AC6 4 HIS D 93 ? HIS B 1352 . ? 1_555 ? 25 AC7 20 ARG D 35 ? ARG B 1294 . ? 1_555 ? 26 AC7 20 PHE D 48 ? PHE B 1307 . ? 1_555 ? 27 AC7 20 SER D 53 ? SER B 1312 . ? 1_555 ? 28 AC7 20 GLU D 56 ? GLU B 1315 . ? 1_555 ? 29 AC7 20 HIS D 57 ? HIS B 1316 . ? 1_555 ? 30 AC7 20 PHE D 80 ? PHE B 1339 . ? 1_555 ? 31 AC7 20 HOH P . ? HOH B 1511 . ? 1_555 ? 32 AC7 20 HOH P . ? HOH B 1525 . ? 1_555 ? 33 AC7 20 HOH P . ? HOH B 1527 . ? 1_555 ? 34 AC7 20 DA F 7 ? DA E 7 . ? 1_555 ? 35 AC7 20 DG F 8 ? DG E 8 . ? 1_555 ? 36 AC7 20 DA F 9 ? DA E 9 . ? 1_555 ? 37 AC7 20 DG F 10 ? DG E 10 . ? 1_555 ? 38 AC7 20 DC E 3 ? DC F 3 . ? 1_555 ? 39 AC7 20 DT E 6 ? DT F 6 . ? 1_555 ? 40 AC7 20 HOH Q . ? HOH F 104 . ? 1_555 ? 41 AC7 20 HOH Q . ? HOH F 107 . ? 1_555 ? 42 AC7 20 HOH Q . ? HOH F 110 . ? 1_555 ? 43 AC7 20 HOH Q . ? HOH F 117 . ? 1_555 ? 44 AC7 20 HOH Q . ? HOH F 119 . ? 1_555 ? 45 AC8 23 TYR D 23 ? TYR B 1282 . ? 1_555 ? 46 AC8 23 VAL D 30 ? VAL B 1289 . ? 1_555 ? 47 AC8 23 ARG D 35 ? ARG B 1294 . ? 1_555 ? 48 AC8 23 PHE D 48 ? PHE B 1307 . ? 1_555 ? 49 AC8 23 TRP D 50 ? TRP B 1309 . ? 1_555 ? 50 AC8 23 TRP D 52 ? TRP B 1311 . ? 1_555 ? 51 AC8 23 SER D 53 ? SER B 1312 . ? 1_555 ? 52 AC8 23 GLU D 56 ? GLU B 1315 . ? 1_555 ? 53 AC8 23 HOH P . ? HOH B 1516 . ? 1_555 ? 54 AC8 23 HOH P . ? HOH B 1527 . ? 1_555 ? 55 AC8 23 DC F 6 ? DC E 6 . ? 1_555 ? 56 AC8 23 DA F 7 ? DA E 7 . ? 1_555 ? 57 AC8 23 DG F 8 ? DG E 8 . ? 1_555 ? 58 AC8 23 DA F 9 ? DA E 9 . ? 1_555 ? 59 AC8 23 DT E 4 ? DT F 4 . ? 1_555 ? 60 AC8 23 DG E 7 ? DG F 7 . ? 1_555 ? 61 AC8 23 HOH Q . ? HOH F 101 . ? 1_555 ? 62 AC8 23 HOH Q . ? HOH F 106 . ? 1_555 ? 63 AC8 23 HOH Q . ? HOH F 107 . ? 1_555 ? 64 AC8 23 HOH Q . ? HOH F 110 . ? 1_555 ? 65 AC8 23 HOH Q . ? HOH F 114 . ? 1_555 ? 66 AC8 23 HOH Q . ? HOH F 117 . ? 1_555 ? 67 AC8 23 HOH Q . ? HOH F 119 . ? 1_555 ? # _atom_sites.entry_id 6JNM _atom_sites.fract_transf_matrix[1][1] 0.011297 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011297 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013826 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 1260 ? ? ? A . n A 1 2 MET 2 1261 ? ? ? A . n A 1 3 LEU 3 1262 ? ? ? A . n A 1 4 HIS 4 1263 ? ? ? A . n A 1 5 LYS 5 1264 ? ? ? A . n A 1 6 ARG 6 1265 1265 ARG ARG A . n A 1 7 ASN 7 1266 1266 ASN ASN A . n A 1 8 ILE 8 1267 1267 ILE ILE A . n A 1 9 CYS 9 1268 1268 CYS CYS A . n A 1 10 PRO 10 1269 1269 PRO PRO A . n A 1 11 ILE 11 1270 1270 ILE ILE A . n A 1 12 LYS 12 1271 1271 LYS LYS A . n A 1 13 GLY 13 1272 1272 GLY GLY A . n A 1 14 CYS 14 1273 1273 CYS CYS A . n A 1 15 GLY 15 1274 1274 GLY GLY A . n A 1 16 LYS 16 1275 1275 LYS LYS A . n A 1 17 ASN 17 1276 1276 ASN ASN A . n A 1 18 PHE 18 1277 1277 PHE PHE A . n A 1 19 PHE 19 1278 1278 PHE PHE A . n A 1 20 SER 20 1279 1279 SER SER A . n A 1 21 HIS 21 1280 1280 HIS HIS A . n A 1 22 LYS 22 1281 1281 LYS LYS A . n A 1 23 TYR 23 1282 1282 TYR TYR A . n A 1 24 LEU 24 1283 1283 LEU LEU A . n A 1 25 VAL 25 1284 1284 VAL VAL A . n A 1 26 GLN 26 1285 1285 GLN GLN A . n A 1 27 HIS 27 1286 1286 HIS HIS A . n A 1 28 GLN 28 1287 1287 GLN GLN A . n A 1 29 ARG 29 1288 1288 ARG ARG A . n A 1 30 VAL 30 1289 1289 VAL VAL A . n A 1 31 HIS 31 1290 1290 HIS HIS A . n A 1 32 SER 32 1291 1291 SER SER A . n A 1 33 ASP 33 1292 1292 ASP ASP A . n A 1 34 ASP 34 1293 1293 ASP ASP A . n A 1 35 ARG 35 1294 1294 ARG ARG A . n A 1 36 PRO 36 1295 1295 PRO PRO A . n A 1 37 LEU 37 1296 1296 LEU LEU A . n A 1 38 LYS 38 1297 1297 LYS LYS A . n A 1 39 CYS 39 1298 1298 CYS CYS A . n A 1 40 PRO 40 1299 1299 PRO PRO A . n A 1 41 TRP 41 1300 1300 TRP TRP A . n A 1 42 LYS 42 1301 1301 LYS LYS A . n A 1 43 GLY 43 1302 1302 GLY GLY A . n A 1 44 CYS 44 1303 1303 CYS CYS A . n A 1 45 LYS 45 1304 1304 LYS LYS A . n A 1 46 MET 46 1305 1305 MET MET A . n A 1 47 THR 47 1306 1306 THR THR A . n A 1 48 PHE 48 1307 1307 PHE PHE A . n A 1 49 LYS 49 1308 1308 LYS LYS A . n A 1 50 TRP 50 1309 1309 TRP TRP A . n A 1 51 ALA 51 1310 1310 ALA ALA A . n A 1 52 TRP 52 1311 1311 TRP TRP A . n A 1 53 SER 53 1312 1312 SER SER A . n A 1 54 ARG 54 1313 1313 ARG ARG A . n A 1 55 THR 55 1314 1314 THR THR A . n A 1 56 GLU 56 1315 1315 GLU GLU A . n A 1 57 HIS 57 1316 1316 HIS HIS A . n A 1 58 ILE 58 1317 1317 ILE ILE A . n A 1 59 ARG 59 1318 1318 ARG ARG A . n A 1 60 VAL 60 1319 1319 VAL VAL A . n A 1 61 HIS 61 1320 1320 HIS HIS A . n A 1 62 THR 62 1321 1321 THR THR A . n A 1 63 GLY 63 1322 1322 GLY GLY A . n A 1 64 ALA 64 1323 1323 ALA ALA A . n A 1 65 ARG 65 1324 1324 ARG ARG A . n A 1 66 PRO 66 1325 1325 PRO PRO A . n A 1 67 TYR 67 1326 1326 TYR TYR A . n A 1 68 VAL 68 1327 1327 VAL VAL A . n A 1 69 CYS 69 1328 1328 CYS CYS A . n A 1 70 ALA 70 1329 1329 ALA ALA A . n A 1 71 GLU 71 1330 1330 GLU GLU A . n A 1 72 PRO 72 1331 1331 PRO PRO A . n A 1 73 ASP 73 1332 1332 ASP ASP A . n A 1 74 CYS 74 1333 1333 CYS CYS A . n A 1 75 GLY 75 1334 1334 GLY GLY A . n A 1 76 GLN 76 1335 1335 GLN GLN A . n A 1 77 THR 77 1336 1336 THR THR A . n A 1 78 PHE 78 1337 1337 PHE PHE A . n A 1 79 ARG 79 1338 1338 ARG ARG A . n A 1 80 PHE 80 1339 1339 PHE PHE A . n A 1 81 VAL 81 1340 1340 VAL VAL A . n A 1 82 SER 82 1341 1341 SER SER A . n A 1 83 ASP 83 1342 1342 ASP ASP A . n A 1 84 PHE 84 1343 1343 PHE PHE A . n A 1 85 SER 85 1344 1344 SER SER A . n A 1 86 ARG 86 1345 1345 ARG ARG A . n A 1 87 HIS 87 1346 1346 HIS HIS A . n A 1 88 LYS 88 1347 1347 LYS LYS A . n A 1 89 ARG 89 1348 1348 ARG ARG A . n A 1 90 LYS 90 1349 1349 LYS LYS A . n A 1 91 THR 91 1350 1350 THR THR A . n A 1 92 GLY 92 1351 1351 GLY GLY A . n A 1 93 HIS 93 1352 1352 HIS HIS A . n A 1 94 SER 94 1353 1353 SER SER A . n A 1 95 VAL 95 1354 ? ? ? A . n A 1 96 LYS 96 1355 ? ? ? A . n A 1 97 LYS 97 1356 ? ? ? A . n A 1 98 THR 98 1357 ? ? ? A . n A 1 99 ASN 99 1358 ? ? ? A . n A 1 100 LYS 100 1359 ? ? ? A . n A 1 101 ARG 101 1360 ? ? ? A . n B 2 1 DT 1 1 1 DT DT D . n B 2 2 DT 2 2 2 DT DT D . n B 2 3 DC 3 3 3 DC DC D . n B 2 4 DT 4 4 4 DT DT D . n B 2 5 5CM 5 5 5 5CM 5CM D . n B 2 6 DT 6 6 6 DT DT D . n B 2 7 DG 7 7 7 DG DG D . n B 2 8 DT 8 8 8 DT DT D . n B 2 9 DT 9 9 9 DT DT D . n B 2 10 DT 10 10 10 DT DT D . n B 2 11 DT 11 11 11 DT DT D . n B 2 12 DG 12 12 12 DG DG D . n C 3 1 DC 1 1 1 DC DC C . n C 3 2 DA 2 2 2 DA DA C . n C 3 3 DA 3 3 3 DA DA C . n C 3 4 DA 4 4 4 DA DA C . n C 3 5 DA 5 5 5 DA DA C . n C 3 6 DC 6 6 6 DC DC C . n C 3 7 DA 7 7 7 DA DA C . n C 3 8 DG 8 8 8 DG DG C . n C 3 9 DA 9 9 9 DA DA C . n C 3 10 DG 10 10 10 DG DG C . n C 3 11 DA 11 11 11 DA DA C . n C 3 12 DA 12 12 12 DA DA C . n D 1 1 LEU 1 1260 ? ? ? B . n D 1 2 MET 2 1261 ? ? ? B . n D 1 3 LEU 3 1262 ? ? ? B . n D 1 4 HIS 4 1263 ? ? ? B . n D 1 5 LYS 5 1264 ? ? ? B . n D 1 6 ARG 6 1265 1265 ARG ARG B . n D 1 7 ASN 7 1266 1266 ASN ASN B . n D 1 8 ILE 8 1267 1267 ILE ILE B . n D 1 9 CYS 9 1268 1268 CYS CYS B . n D 1 10 PRO 10 1269 1269 PRO PRO B . n D 1 11 ILE 11 1270 1270 ILE ILE B . n D 1 12 LYS 12 1271 1271 LYS LYS B . n D 1 13 GLY 13 1272 1272 GLY GLY B . n D 1 14 CYS 14 1273 1273 CYS CYS B . n D 1 15 GLY 15 1274 1274 GLY GLY B . n D 1 16 LYS 16 1275 1275 LYS LYS B . n D 1 17 ASN 17 1276 1276 ASN ASN B . n D 1 18 PHE 18 1277 1277 PHE PHE B . n D 1 19 PHE 19 1278 1278 PHE PHE B . n D 1 20 SER 20 1279 1279 SER SER B . n D 1 21 HIS 21 1280 1280 HIS HIS B . n D 1 22 LYS 22 1281 1281 LYS LYS B . n D 1 23 TYR 23 1282 1282 TYR TYR B . n D 1 24 LEU 24 1283 1283 LEU LEU B . n D 1 25 VAL 25 1284 1284 VAL VAL B . n D 1 26 GLN 26 1285 1285 GLN GLN B . n D 1 27 HIS 27 1286 1286 HIS HIS B . n D 1 28 GLN 28 1287 1287 GLN GLN B . n D 1 29 ARG 29 1288 1288 ARG ARG B . n D 1 30 VAL 30 1289 1289 VAL VAL B . n D 1 31 HIS 31 1290 1290 HIS HIS B . n D 1 32 SER 32 1291 1291 SER SER B . n D 1 33 ASP 33 1292 1292 ASP ASP B . n D 1 34 ASP 34 1293 1293 ASP ASP B . n D 1 35 ARG 35 1294 1294 ARG ARG B . n D 1 36 PRO 36 1295 1295 PRO PRO B . n D 1 37 LEU 37 1296 1296 LEU LEU B . n D 1 38 LYS 38 1297 1297 LYS LYS B . n D 1 39 CYS 39 1298 1298 CYS CYS B . n D 1 40 PRO 40 1299 1299 PRO PRO B . n D 1 41 TRP 41 1300 1300 TRP TRP B . n D 1 42 LYS 42 1301 1301 LYS LYS B . n D 1 43 GLY 43 1302 1302 GLY GLY B . n D 1 44 CYS 44 1303 1303 CYS CYS B . n D 1 45 LYS 45 1304 1304 LYS LYS B . n D 1 46 MET 46 1305 1305 MET MET B . n D 1 47 THR 47 1306 1306 THR THR B . n D 1 48 PHE 48 1307 1307 PHE PHE B . n D 1 49 LYS 49 1308 1308 LYS LYS B . n D 1 50 TRP 50 1309 1309 TRP TRP B . n D 1 51 ALA 51 1310 1310 ALA ALA B . n D 1 52 TRP 52 1311 1311 TRP TRP B . n D 1 53 SER 53 1312 1312 SER SER B . n D 1 54 ARG 54 1313 1313 ARG ARG B . n D 1 55 THR 55 1314 1314 THR THR B . n D 1 56 GLU 56 1315 1315 GLU GLU B . n D 1 57 HIS 57 1316 1316 HIS HIS B . n D 1 58 ILE 58 1317 1317 ILE ILE B . n D 1 59 ARG 59 1318 1318 ARG ARG B . n D 1 60 VAL 60 1319 1319 VAL VAL B . n D 1 61 HIS 61 1320 1320 HIS HIS B . n D 1 62 THR 62 1321 1321 THR THR B . n D 1 63 GLY 63 1322 1322 GLY GLY B . n D 1 64 ALA 64 1323 1323 ALA ALA B . n D 1 65 ARG 65 1324 1324 ARG ARG B . n D 1 66 PRO 66 1325 1325 PRO PRO B . n D 1 67 TYR 67 1326 1326 TYR TYR B . n D 1 68 VAL 68 1327 1327 VAL VAL B . n D 1 69 CYS 69 1328 1328 CYS CYS B . n D 1 70 ALA 70 1329 1329 ALA ALA B . n D 1 71 GLU 71 1330 1330 GLU GLU B . n D 1 72 PRO 72 1331 1331 PRO PRO B . n D 1 73 ASP 73 1332 1332 ASP ASP B . n D 1 74 CYS 74 1333 1333 CYS CYS B . n D 1 75 GLY 75 1334 1334 GLY GLY B . n D 1 76 GLN 76 1335 1335 GLN GLN B . n D 1 77 THR 77 1336 1336 THR THR B . n D 1 78 PHE 78 1337 1337 PHE PHE B . n D 1 79 ARG 79 1338 1338 ARG ARG B . n D 1 80 PHE 80 1339 1339 PHE PHE B . n D 1 81 VAL 81 1340 1340 VAL VAL B . n D 1 82 SER 82 1341 1341 SER SER B . n D 1 83 ASP 83 1342 1342 ASP ASP B . n D 1 84 PHE 84 1343 1343 PHE PHE B . n D 1 85 SER 85 1344 1344 SER SER B . n D 1 86 ARG 86 1345 1345 ARG ARG B . n D 1 87 HIS 87 1346 1346 HIS HIS B . n D 1 88 LYS 88 1347 1347 LYS LYS B . n D 1 89 ARG 89 1348 1348 ARG ARG B . n D 1 90 LYS 90 1349 1349 LYS LYS B . n D 1 91 THR 91 1350 1350 THR THR B . n D 1 92 GLY 92 1351 1351 GLY GLY B . n D 1 93 HIS 93 1352 1352 HIS HIS B . n D 1 94 SER 94 1353 1353 SER SER B . n D 1 95 VAL 95 1354 ? ? ? B . n D 1 96 LYS 96 1355 ? ? ? B . n D 1 97 LYS 97 1356 ? ? ? B . n D 1 98 THR 98 1357 ? ? ? B . n D 1 99 ASN 99 1358 ? ? ? B . n D 1 100 LYS 100 1359 ? ? ? B . n D 1 101 ARG 101 1360 ? ? ? B . n E 2 1 DT 1 1 1 DT DT F . n E 2 2 DT 2 2 2 DT DT F . n E 2 3 DC 3 3 3 DC DC F . n E 2 4 DT 4 4 4 DT DT F . n E 2 5 5CM 5 5 5 5CM 5CM F . n E 2 6 DT 6 6 6 DT DT F . n E 2 7 DG 7 7 7 DG DG F . n E 2 8 DT 8 8 8 DT DT F . n E 2 9 DT 9 9 9 DT DT F . n E 2 10 DT 10 10 10 DT DT F . n E 2 11 DT 11 11 11 DT DT F . n E 2 12 DG 12 12 12 DG DG F . n F 3 1 DC 1 1 1 DC DC E . n F 3 2 DA 2 2 2 DA DA E . n F 3 3 DA 3 3 3 DA DA E . n F 3 4 DA 4 4 4 DA DA E . n F 3 5 DA 5 5 5 DA DA E . n F 3 6 DC 6 6 6 DC DC E . n F 3 7 DA 7 7 7 DA DA E . n F 3 8 DG 8 8 8 DG DG E . n F 3 9 DA 9 9 9 DA DA E . n F 3 10 DG 10 10 10 DG DG E . n F 3 11 DA 11 11 11 DA DA E . n F 3 12 DA 12 12 12 DA DA E . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 ZN 1 1401 1401 ZN ZN A . H 4 ZN 1 1402 1402 ZN ZN A . I 4 ZN 1 1403 1403 ZN ZN A . J 4 ZN 1 1401 1401 ZN ZN B . K 4 ZN 1 1402 1402 ZN ZN B . L 4 ZN 1 1403 1403 ZN ZN B . M 5 HOH 1 1501 1501 HOH HOH A . M 5 HOH 2 1502 1502 HOH HOH A . M 5 HOH 3 1503 1503 HOH HOH A . M 5 HOH 4 1504 1504 HOH HOH A . M 5 HOH 5 1505 1505 HOH HOH A . M 5 HOH 6 1506 1506 HOH HOH A . M 5 HOH 7 1507 1507 HOH HOH A . M 5 HOH 8 1508 1508 HOH HOH A . M 5 HOH 9 1509 1509 HOH HOH A . M 5 HOH 10 1510 1510 HOH HOH A . M 5 HOH 11 1511 1511 HOH HOH A . M 5 HOH 12 1512 1512 HOH HOH A . M 5 HOH 13 1513 1513 HOH HOH A . M 5 HOH 14 1514 1514 HOH HOH A . M 5 HOH 15 1515 1515 HOH HOH A . M 5 HOH 16 1516 1516 HOH HOH A . M 5 HOH 17 1517 1517 HOH HOH A . M 5 HOH 18 1518 1518 HOH HOH A . M 5 HOH 19 1519 1519 HOH HOH A . M 5 HOH 20 1520 1520 HOH HOH A . M 5 HOH 21 1521 1521 HOH HOH A . M 5 HOH 22 1522 1522 HOH HOH A . M 5 HOH 23 1523 1523 HOH HOH A . M 5 HOH 24 1524 1524 HOH HOH A . M 5 HOH 25 1525 1525 HOH HOH A . M 5 HOH 26 1526 1526 HOH HOH A . M 5 HOH 27 1527 1527 HOH HOH A . M 5 HOH 28 1528 1528 HOH HOH A . M 5 HOH 29 1529 1529 HOH HOH A . M 5 HOH 30 1530 1530 HOH HOH A . M 5 HOH 31 1531 1531 HOH HOH A . M 5 HOH 32 1532 1532 HOH HOH A . M 5 HOH 33 1533 1533 HOH HOH A . M 5 HOH 34 1534 1534 HOH HOH A . M 5 HOH 35 1535 1535 HOH HOH A . M 5 HOH 36 1536 1536 HOH HOH A . M 5 HOH 37 1537 1537 HOH HOH A . M 5 HOH 38 1538 1538 HOH HOH A . M 5 HOH 39 1539 1539 HOH HOH A . M 5 HOH 40 1540 1540 HOH HOH A . M 5 HOH 41 1541 1541 HOH HOH A . M 5 HOH 42 1542 1542 HOH HOH A . M 5 HOH 43 1543 1543 HOH HOH A . M 5 HOH 44 1544 1544 HOH HOH A . N 5 HOH 1 101 101 HOH HOH D . N 5 HOH 2 102 102 HOH HOH D . N 5 HOH 3 103 103 HOH HOH D . N 5 HOH 4 104 104 HOH HOH D . N 5 HOH 5 105 105 HOH HOH D . N 5 HOH 6 106 106 HOH HOH D . N 5 HOH 7 107 107 HOH HOH D . N 5 HOH 8 108 108 HOH HOH D . N 5 HOH 9 109 109 HOH HOH D . N 5 HOH 10 110 110 HOH HOH D . N 5 HOH 11 111 111 HOH HOH D . N 5 HOH 12 112 112 HOH HOH D . N 5 HOH 13 113 113 HOH HOH D . N 5 HOH 14 114 114 HOH HOH D . N 5 HOH 15 115 115 HOH HOH D . N 5 HOH 16 116 116 HOH HOH D . N 5 HOH 17 117 117 HOH HOH D . N 5 HOH 18 118 118 HOH HOH D . N 5 HOH 19 119 119 HOH HOH D . N 5 HOH 20 120 120 HOH HOH D . N 5 HOH 21 121 121 HOH HOH D . N 5 HOH 22 122 122 HOH HOH D . N 5 HOH 23 123 123 HOH HOH D . O 5 HOH 1 101 101 HOH HOH C . O 5 HOH 2 102 102 HOH HOH C . O 5 HOH 3 103 103 HOH HOH C . O 5 HOH 4 104 104 HOH HOH C . O 5 HOH 5 105 105 HOH HOH C . O 5 HOH 6 106 106 HOH HOH C . O 5 HOH 7 107 107 HOH HOH C . O 5 HOH 8 108 108 HOH HOH C . O 5 HOH 9 109 109 HOH HOH C . O 5 HOH 10 110 110 HOH HOH C . O 5 HOH 11 111 111 HOH HOH C . O 5 HOH 12 112 112 HOH HOH C . O 5 HOH 13 113 113 HOH HOH C . O 5 HOH 14 114 114 HOH HOH C . O 5 HOH 15 115 115 HOH HOH C . P 5 HOH 1 1501 1501 HOH HOH B . P 5 HOH 2 1502 1502 HOH HOH B . P 5 HOH 3 1503 1503 HOH HOH B . P 5 HOH 4 1504 1504 HOH HOH B . P 5 HOH 5 1505 1505 HOH HOH B . P 5 HOH 6 1506 1506 HOH HOH B . P 5 HOH 7 1507 1507 HOH HOH B . P 5 HOH 8 1508 1508 HOH HOH B . P 5 HOH 9 1509 1509 HOH HOH B . P 5 HOH 10 1510 1510 HOH HOH B . P 5 HOH 11 1511 1511 HOH HOH B . P 5 HOH 12 1512 1512 HOH HOH B . P 5 HOH 13 1513 1513 HOH HOH B . P 5 HOH 14 1514 1514 HOH HOH B . P 5 HOH 15 1515 1515 HOH HOH B . P 5 HOH 16 1516 1516 HOH HOH B . P 5 HOH 17 1517 1517 HOH HOH B . P 5 HOH 18 1518 1518 HOH HOH B . P 5 HOH 19 1519 1519 HOH HOH B . P 5 HOH 20 1520 1520 HOH HOH B . P 5 HOH 21 1521 1521 HOH HOH B . P 5 HOH 22 1522 1522 HOH HOH B . P 5 HOH 23 1523 1523 HOH HOH B . P 5 HOH 24 1524 1524 HOH HOH B . P 5 HOH 25 1525 1525 HOH HOH B . P 5 HOH 26 1526 1526 HOH HOH B . P 5 HOH 27 1527 1527 HOH HOH B . P 5 HOH 28 1528 1528 HOH HOH B . P 5 HOH 29 1529 1529 HOH HOH B . P 5 HOH 30 1530 1530 HOH HOH B . P 5 HOH 31 1531 1531 HOH HOH B . P 5 HOH 32 1532 1532 HOH HOH B . P 5 HOH 33 1533 1533 HOH HOH B . P 5 HOH 34 1534 1534 HOH HOH B . P 5 HOH 35 1535 1535 HOH HOH B . P 5 HOH 36 1536 1536 HOH HOH B . P 5 HOH 37 1537 1537 HOH HOH B . P 5 HOH 38 1538 1538 HOH HOH B . P 5 HOH 39 1539 1539 HOH HOH B . P 5 HOH 40 1540 1540 HOH HOH B . P 5 HOH 41 1541 1541 HOH HOH B . P 5 HOH 42 1542 1542 HOH HOH B . P 5 HOH 43 1543 1543 HOH HOH B . P 5 HOH 44 1544 1544 HOH HOH B . P 5 HOH 45 1545 1545 HOH HOH B . P 5 HOH 46 1546 1546 HOH HOH B . P 5 HOH 47 1547 1547 HOH HOH B . P 5 HOH 48 1548 1548 HOH HOH B . P 5 HOH 49 1549 1549 HOH HOH B . Q 5 HOH 1 101 101 HOH HOH F . Q 5 HOH 2 102 102 HOH HOH F . Q 5 HOH 3 103 103 HOH HOH F . Q 5 HOH 4 104 104 HOH HOH F . Q 5 HOH 5 105 105 HOH HOH F . Q 5 HOH 6 106 106 HOH HOH F . Q 5 HOH 7 107 107 HOH HOH F . Q 5 HOH 8 108 108 HOH HOH F . Q 5 HOH 9 109 109 HOH HOH F . Q 5 HOH 10 110 110 HOH HOH F . Q 5 HOH 11 111 111 HOH HOH F . Q 5 HOH 12 112 112 HOH HOH F . Q 5 HOH 13 113 113 HOH HOH F . Q 5 HOH 14 114 114 HOH HOH F . Q 5 HOH 15 115 115 HOH HOH F . Q 5 HOH 16 116 116 HOH HOH F . Q 5 HOH 17 117 117 HOH HOH F . Q 5 HOH 18 118 118 HOH HOH F . Q 5 HOH 19 119 119 HOH HOH F . Q 5 HOH 20 120 120 HOH HOH F . Q 5 HOH 21 121 121 HOH HOH F . Q 5 HOH 22 122 122 HOH HOH F . Q 5 HOH 23 123 123 HOH HOH F . R 5 HOH 1 101 101 HOH HOH E . R 5 HOH 2 102 102 HOH HOH E . R 5 HOH 3 103 103 HOH HOH E . R 5 HOH 4 104 104 HOH HOH E . R 5 HOH 5 105 105 HOH HOH E . R 5 HOH 6 106 106 HOH HOH E . R 5 HOH 7 107 107 HOH HOH E . R 5 HOH 8 108 108 HOH HOH E . R 5 HOH 9 109 109 HOH HOH E . R 5 HOH 10 110 110 HOH HOH E . R 5 HOH 11 111 111 HOH HOH E . R 5 HOH 12 112 112 HOH HOH E . R 5 HOH 13 113 113 HOH HOH E . R 5 HOH 14 114 114 HOH HOH E . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 author_and_software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,G,H,I,M,N,O 2 1 D,E,F,J,K,L,P,Q,R # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4080 ? 1 MORE -27 ? 1 'SSA (A^2)' 8670 ? 2 'ABSA (A^2)' 4060 ? 2 MORE -26 ? 2 'SSA (A^2)' 8700 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 9 ? A CYS 1268 ? 1_555 ZN ? G ZN . ? A ZN 1401 ? 1_555 NE2 ? A HIS 27 ? A HIS 1286 ? 1_555 116.5 ? 2 SG ? A CYS 9 ? A CYS 1268 ? 1_555 ZN ? G ZN . ? A ZN 1401 ? 1_555 NE2 ? A HIS 31 ? A HIS 1290 ? 1_555 114.1 ? 3 NE2 ? A HIS 27 ? A HIS 1286 ? 1_555 ZN ? G ZN . ? A ZN 1401 ? 1_555 NE2 ? A HIS 31 ? A HIS 1290 ? 1_555 112.1 ? 4 SG ? A CYS 39 ? A CYS 1298 ? 1_555 ZN ? H ZN . ? A ZN 1402 ? 1_555 SG ? A CYS 44 ? A CYS 1303 ? 1_555 113.3 ? 5 SG ? A CYS 39 ? A CYS 1298 ? 1_555 ZN ? H ZN . ? A ZN 1402 ? 1_555 NE2 ? A HIS 57 ? A HIS 1316 ? 1_555 105.6 ? 6 SG ? A CYS 44 ? A CYS 1303 ? 1_555 ZN ? H ZN . ? A ZN 1402 ? 1_555 NE2 ? A HIS 57 ? A HIS 1316 ? 1_555 113.6 ? 7 SG ? A CYS 39 ? A CYS 1298 ? 1_555 ZN ? H ZN . ? A ZN 1402 ? 1_555 NE2 ? A HIS 61 ? A HIS 1320 ? 1_555 109.4 ? 8 SG ? A CYS 44 ? A CYS 1303 ? 1_555 ZN ? H ZN . ? A ZN 1402 ? 1_555 NE2 ? A HIS 61 ? A HIS 1320 ? 1_555 110.0 ? 9 NE2 ? A HIS 57 ? A HIS 1316 ? 1_555 ZN ? H ZN . ? A ZN 1402 ? 1_555 NE2 ? A HIS 61 ? A HIS 1320 ? 1_555 104.4 ? 10 NE2 ? A HIS 87 ? A HIS 1346 ? 1_555 ZN ? I ZN . ? A ZN 1403 ? 1_555 ND1 ? A HIS 93 ? A HIS 1352 ? 1_555 112.4 ? 11 SG ? D CYS 9 ? B CYS 1268 ? 1_555 ZN ? J ZN . ? B ZN 1401 ? 1_555 NE2 ? D HIS 27 ? B HIS 1286 ? 1_555 109.4 ? 12 SG ? D CYS 9 ? B CYS 1268 ? 1_555 ZN ? J ZN . ? B ZN 1401 ? 1_555 NE2 ? D HIS 31 ? B HIS 1290 ? 1_555 119.3 ? 13 NE2 ? D HIS 27 ? B HIS 1286 ? 1_555 ZN ? J ZN . ? B ZN 1401 ? 1_555 NE2 ? D HIS 31 ? B HIS 1290 ? 1_555 114.6 ? 14 SG ? D CYS 39 ? B CYS 1298 ? 1_555 ZN ? K ZN . ? B ZN 1402 ? 1_555 SG ? D CYS 44 ? B CYS 1303 ? 1_555 116.4 ? 15 SG ? D CYS 39 ? B CYS 1298 ? 1_555 ZN ? K ZN . ? B ZN 1402 ? 1_555 NE2 ? D HIS 57 ? B HIS 1316 ? 1_555 107.0 ? 16 SG ? D CYS 44 ? B CYS 1303 ? 1_555 ZN ? K ZN . ? B ZN 1402 ? 1_555 NE2 ? D HIS 57 ? B HIS 1316 ? 1_555 113.3 ? 17 SG ? D CYS 39 ? B CYS 1298 ? 1_555 ZN ? K ZN . ? B ZN 1402 ? 1_555 NE2 ? D HIS 61 ? B HIS 1320 ? 1_555 108.4 ? 18 SG ? D CYS 44 ? B CYS 1303 ? 1_555 ZN ? K ZN . ? B ZN 1402 ? 1_555 NE2 ? D HIS 61 ? B HIS 1320 ? 1_555 107.7 ? 19 NE2 ? D HIS 57 ? B HIS 1316 ? 1_555 ZN ? K ZN . ? B ZN 1402 ? 1_555 NE2 ? D HIS 61 ? B HIS 1320 ? 1_555 103.2 ? 20 NE2 ? D HIS 87 ? B HIS 1346 ? 1_555 ZN ? L ZN . ? B ZN 1403 ? 1_555 ND1 ? D HIS 93 ? B HIS 1352 ? 1_555 111.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-03-27 2 'Structure model' 1 1 2019-05-15 3 'Structure model' 1 2 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model 7 3 'Structure model' struct_conn 8 3 'Structure model' struct_conn_type # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 3 'Structure model' '_database_2.pdbx_DOI' 13 3 'Structure model' '_database_2.pdbx_database_accession' 14 3 'Structure model' '_struct_conn.conn_type_id' 15 3 'Structure model' '_struct_conn.id' 16 3 'Structure model' '_struct_conn.pdbx_dist_value' 17 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 19 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 26 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 27 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 28 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 29 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 30 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 31 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 32 3 'Structure model' '_struct_conn_type.id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0158 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 SG _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 CYS _pdbx_validate_close_contact.auth_seq_id_1 1273 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 ZN _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 ZN _pdbx_validate_close_contact.auth_seq_id_2 1401 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.57 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 1502 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 F _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 111 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_465 _pdbx_validate_symm_contact.dist 1.95 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DT _pdbx_validate_rmsd_bond.auth_seq_id_1 4 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP1 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DT _pdbx_validate_rmsd_bond.auth_seq_id_2 4 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.380 _pdbx_validate_rmsd_bond.bond_target_value 1.485 _pdbx_validate_rmsd_bond.bond_deviation -0.105 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.017 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A CYS 1268 ? ? CB A CYS 1268 ? ? SG A CYS 1268 ? ? 122.93 114.20 8.73 1.10 N 2 1 CA A CYS 1273 ? ? CB A CYS 1273 ? ? SG A CYS 1273 ? ? 129.37 114.20 15.17 1.10 N 3 1 CA A CYS 1328 ? ? CB A CYS 1328 ? ? SG A CYS 1328 ? ? 122.37 114.20 8.17 1.10 N 4 1 CA A CYS 1333 ? ? CB A CYS 1333 ? ? SG A CYS 1333 ? ? 123.59 114.20 9.39 1.10 N 5 1 NE A ARG 1338 ? ? CZ A ARG 1338 ? ? NH1 A ARG 1338 ? ? 116.92 120.30 -3.38 0.50 N 6 1 NE A ARG 1345 ? ? CZ A ARG 1345 ? ? NH1 A ARG 1345 ? ? 123.51 120.30 3.21 0.50 N 7 1 NE A ARG 1348 ? ? CZ A ARG 1348 ? ? NH1 A ARG 1348 ? ? 116.78 120.30 -3.52 0.50 N 8 1 NE A ARG 1348 ? ? CZ A ARG 1348 ? ? NH2 A ARG 1348 ? ? 124.81 120.30 4.51 0.50 N 9 1 "O5'" D DG 7 ? ? P D DG 7 ? ? OP1 D DG 7 ? ? 117.99 110.70 7.29 1.20 N 10 1 CA B CYS 1273 ? ? CB B CYS 1273 ? ? SG B CYS 1273 ? ? 133.39 114.20 19.19 1.10 N 11 1 N B SER 1312 ? ? CA B SER 1312 ? ? CB B SER 1312 ? ? 119.51 110.50 9.01 1.50 N 12 1 CA B CYS 1328 ? ? CB B CYS 1328 ? ? SG B CYS 1328 ? ? 123.46 114.20 9.26 1.10 N 13 1 CA B CYS 1333 ? ? CB B CYS 1333 ? ? SG B CYS 1333 ? ? 125.27 114.20 11.07 1.10 N 14 1 NE B ARG 1348 ? ? CZ B ARG 1348 ? ? NH2 B ARG 1348 ? ? 125.13 120.30 4.83 0.50 N 15 1 "O5'" F DT 6 ? ? P F DT 6 ? ? OP2 F DT 6 ? ? 124.08 110.70 13.38 1.20 N 16 1 "O5'" F DG 7 ? ? P F DG 7 ? ? OP1 F DG 7 ? ? 118.38 110.70 7.68 1.20 N 17 1 "O4'" E DG 10 ? ? "C1'" E DG 10 ? ? N9 E DG 10 ? ? 110.32 108.30 2.02 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 1266 ? ? 65.87 63.59 2 1 CYS A 1273 ? ? -103.31 -72.30 3 1 CYS B 1273 ? ? -100.30 -83.59 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LEU 1260 ? A LEU 1 2 1 Y 1 A MET 1261 ? A MET 2 3 1 Y 1 A LEU 1262 ? A LEU 3 4 1 Y 1 A HIS 1263 ? A HIS 4 5 1 Y 1 A LYS 1264 ? A LYS 5 6 1 Y 1 A VAL 1354 ? A VAL 95 7 1 Y 1 A LYS 1355 ? A LYS 96 8 1 Y 1 A LYS 1356 ? A LYS 97 9 1 Y 1 A THR 1357 ? A THR 98 10 1 Y 1 A ASN 1358 ? A ASN 99 11 1 Y 1 A LYS 1359 ? A LYS 100 12 1 Y 1 A ARG 1360 ? A ARG 101 13 1 Y 1 B LEU 1260 ? D LEU 1 14 1 Y 1 B MET 1261 ? D MET 2 15 1 Y 1 B LEU 1262 ? D LEU 3 16 1 Y 1 B HIS 1263 ? D HIS 4 17 1 Y 1 B LYS 1264 ? D LYS 5 18 1 Y 1 B VAL 1354 ? D VAL 95 19 1 Y 1 B LYS 1355 ? D LYS 96 20 1 Y 1 B LYS 1356 ? D LYS 97 21 1 Y 1 B THR 1357 ? D THR 98 22 1 Y 1 B ASN 1358 ? D ASN 99 23 1 Y 1 B LYS 1359 ? D LYS 100 24 1 Y 1 B ARG 1360 ? D ARG 101 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5CM N1 N N N 1 5CM C2 C N N 2 5CM N3 N N N 3 5CM C4 C N N 4 5CM C5 C N N 5 5CM C5A C N N 6 5CM C6 C N N 7 5CM O2 O N N 8 5CM N4 N N N 9 5CM "C1'" C N R 10 5CM "C2'" C N N 11 5CM "C3'" C N S 12 5CM "C4'" C N R 13 5CM "O4'" O N N 14 5CM "O3'" O N N 15 5CM "C5'" C N N 16 5CM "O5'" O N N 17 5CM P P N N 18 5CM OP1 O N N 19 5CM OP2 O N N 20 5CM OP3 O N N 21 5CM H5A1 H N N 22 5CM H5A2 H N N 23 5CM H5A3 H N N 24 5CM H6 H N N 25 5CM HN41 H N N 26 5CM HN42 H N N 27 5CM "H1'" H N N 28 5CM "H2'" H N N 29 5CM "H2''" H N N 30 5CM "H3'" H N N 31 5CM "H4'" H N N 32 5CM "HO3'" H N N 33 5CM "H5'" H N N 34 5CM "H5''" H N N 35 5CM HOP2 H N N 36 5CM HOP3 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 CYS N N N N 111 CYS CA C N R 112 CYS C C N N 113 CYS O O N N 114 CYS CB C N N 115 CYS SG S N N 116 CYS OXT O N N 117 CYS H H N N 118 CYS H2 H N N 119 CYS HA H N N 120 CYS HB2 H N N 121 CYS HB3 H N N 122 CYS HG H N N 123 CYS HXT H N N 124 DA OP3 O N N 125 DA P P N N 126 DA OP1 O N N 127 DA OP2 O N N 128 DA "O5'" O N N 129 DA "C5'" C N N 130 DA "C4'" C N R 131 DA "O4'" O N N 132 DA "C3'" C N S 133 DA "O3'" O N N 134 DA "C2'" C N N 135 DA "C1'" C N R 136 DA N9 N Y N 137 DA C8 C Y N 138 DA N7 N Y N 139 DA C5 C Y N 140 DA C6 C Y N 141 DA N6 N N N 142 DA N1 N Y N 143 DA C2 C Y N 144 DA N3 N Y N 145 DA C4 C Y N 146 DA HOP3 H N N 147 DA HOP2 H N N 148 DA "H5'" H N N 149 DA "H5''" H N N 150 DA "H4'" H N N 151 DA "H3'" H N N 152 DA "HO3'" H N N 153 DA "H2'" H N N 154 DA "H2''" H N N 155 DA "H1'" H N N 156 DA H8 H N N 157 DA H61 H N N 158 DA H62 H N N 159 DA H2 H N N 160 DC OP3 O N N 161 DC P P N N 162 DC OP1 O N N 163 DC OP2 O N N 164 DC "O5'" O N N 165 DC "C5'" C N N 166 DC "C4'" C N R 167 DC "O4'" O N N 168 DC "C3'" C N S 169 DC "O3'" O N N 170 DC "C2'" C N N 171 DC "C1'" C N R 172 DC N1 N N N 173 DC C2 C N N 174 DC O2 O N N 175 DC N3 N N N 176 DC C4 C N N 177 DC N4 N N N 178 DC C5 C N N 179 DC C6 C N N 180 DC HOP3 H N N 181 DC HOP2 H N N 182 DC "H5'" H N N 183 DC "H5''" H N N 184 DC "H4'" H N N 185 DC "H3'" H N N 186 DC "HO3'" H N N 187 DC "H2'" H N N 188 DC "H2''" H N N 189 DC "H1'" H N N 190 DC H41 H N N 191 DC H42 H N N 192 DC H5 H N N 193 DC H6 H N N 194 DG OP3 O N N 195 DG P P N N 196 DG OP1 O N N 197 DG OP2 O N N 198 DG "O5'" O N N 199 DG "C5'" C N N 200 DG "C4'" C N R 201 DG "O4'" O N N 202 DG "C3'" C N S 203 DG "O3'" O N N 204 DG "C2'" C N N 205 DG "C1'" C N R 206 DG N9 N Y N 207 DG C8 C Y N 208 DG N7 N Y N 209 DG C5 C Y N 210 DG C6 C N N 211 DG O6 O N N 212 DG N1 N N N 213 DG C2 C N N 214 DG N2 N N N 215 DG N3 N N N 216 DG C4 C Y N 217 DG HOP3 H N N 218 DG HOP2 H N N 219 DG "H5'" H N N 220 DG "H5''" H N N 221 DG "H4'" H N N 222 DG "H3'" H N N 223 DG "HO3'" H N N 224 DG "H2'" H N N 225 DG "H2''" H N N 226 DG "H1'" H N N 227 DG H8 H N N 228 DG H1 H N N 229 DG H21 H N N 230 DG H22 H N N 231 DT OP3 O N N 232 DT P P N N 233 DT OP1 O N N 234 DT OP2 O N N 235 DT "O5'" O N N 236 DT "C5'" C N N 237 DT "C4'" C N R 238 DT "O4'" O N N 239 DT "C3'" C N S 240 DT "O3'" O N N 241 DT "C2'" C N N 242 DT "C1'" C N R 243 DT N1 N N N 244 DT C2 C N N 245 DT O2 O N N 246 DT N3 N N N 247 DT C4 C N N 248 DT O4 O N N 249 DT C5 C N N 250 DT C7 C N N 251 DT C6 C N N 252 DT HOP3 H N N 253 DT HOP2 H N N 254 DT "H5'" H N N 255 DT "H5''" H N N 256 DT "H4'" H N N 257 DT "H3'" H N N 258 DT "HO3'" H N N 259 DT "H2'" H N N 260 DT "H2''" H N N 261 DT "H1'" H N N 262 DT H3 H N N 263 DT H71 H N N 264 DT H72 H N N 265 DT H73 H N N 266 DT H6 H N N 267 GLN N N N N 268 GLN CA C N S 269 GLN C C N N 270 GLN O O N N 271 GLN CB C N N 272 GLN CG C N N 273 GLN CD C N N 274 GLN OE1 O N N 275 GLN NE2 N N N 276 GLN OXT O N N 277 GLN H H N N 278 GLN H2 H N N 279 GLN HA H N N 280 GLN HB2 H N N 281 GLN HB3 H N N 282 GLN HG2 H N N 283 GLN HG3 H N N 284 GLN HE21 H N N 285 GLN HE22 H N N 286 GLN HXT H N N 287 GLU N N N N 288 GLU CA C N S 289 GLU C C N N 290 GLU O O N N 291 GLU CB C N N 292 GLU CG C N N 293 GLU CD C N N 294 GLU OE1 O N N 295 GLU OE2 O N N 296 GLU OXT O N N 297 GLU H H N N 298 GLU H2 H N N 299 GLU HA H N N 300 GLU HB2 H N N 301 GLU HB3 H N N 302 GLU HG2 H N N 303 GLU HG3 H N N 304 GLU HE2 H N N 305 GLU HXT H N N 306 GLY N N N N 307 GLY CA C N N 308 GLY C C N N 309 GLY O O N N 310 GLY OXT O N N 311 GLY H H N N 312 GLY H2 H N N 313 GLY HA2 H N N 314 GLY HA3 H N N 315 GLY HXT H N N 316 HIS N N N N 317 HIS CA C N S 318 HIS C C N N 319 HIS O O N N 320 HIS CB C N N 321 HIS CG C Y N 322 HIS ND1 N Y N 323 HIS CD2 C Y N 324 HIS CE1 C Y N 325 HIS NE2 N Y N 326 HIS OXT O N N 327 HIS H H N N 328 HIS H2 H N N 329 HIS HA H N N 330 HIS HB2 H N N 331 HIS HB3 H N N 332 HIS HD1 H N N 333 HIS HD2 H N N 334 HIS HE1 H N N 335 HIS HE2 H N N 336 HIS HXT H N N 337 HOH O O N N 338 HOH H1 H N N 339 HOH H2 H N N 340 ILE N N N N 341 ILE CA C N S 342 ILE C C N N 343 ILE O O N N 344 ILE CB C N S 345 ILE CG1 C N N 346 ILE CG2 C N N 347 ILE CD1 C N N 348 ILE OXT O N N 349 ILE H H N N 350 ILE H2 H N N 351 ILE HA H N N 352 ILE HB H N N 353 ILE HG12 H N N 354 ILE HG13 H N N 355 ILE HG21 H N N 356 ILE HG22 H N N 357 ILE HG23 H N N 358 ILE HD11 H N N 359 ILE HD12 H N N 360 ILE HD13 H N N 361 ILE HXT H N N 362 LEU N N N N 363 LEU CA C N S 364 LEU C C N N 365 LEU O O N N 366 LEU CB C N N 367 LEU CG C N N 368 LEU CD1 C N N 369 LEU CD2 C N N 370 LEU OXT O N N 371 LEU H H N N 372 LEU H2 H N N 373 LEU HA H N N 374 LEU HB2 H N N 375 LEU HB3 H N N 376 LEU HG H N N 377 LEU HD11 H N N 378 LEU HD12 H N N 379 LEU HD13 H N N 380 LEU HD21 H N N 381 LEU HD22 H N N 382 LEU HD23 H N N 383 LEU HXT H N N 384 LYS N N N N 385 LYS CA C N S 386 LYS C C N N 387 LYS O O N N 388 LYS CB C N N 389 LYS CG C N N 390 LYS CD C N N 391 LYS CE C N N 392 LYS NZ N N N 393 LYS OXT O N N 394 LYS H H N N 395 LYS H2 H N N 396 LYS HA H N N 397 LYS HB2 H N N 398 LYS HB3 H N N 399 LYS HG2 H N N 400 LYS HG3 H N N 401 LYS HD2 H N N 402 LYS HD3 H N N 403 LYS HE2 H N N 404 LYS HE3 H N N 405 LYS HZ1 H N N 406 LYS HZ2 H N N 407 LYS HZ3 H N N 408 LYS HXT H N N 409 MET N N N N 410 MET CA C N S 411 MET C C N N 412 MET O O N N 413 MET CB C N N 414 MET CG C N N 415 MET SD S N N 416 MET CE C N N 417 MET OXT O N N 418 MET H H N N 419 MET H2 H N N 420 MET HA H N N 421 MET HB2 H N N 422 MET HB3 H N N 423 MET HG2 H N N 424 MET HG3 H N N 425 MET HE1 H N N 426 MET HE2 H N N 427 MET HE3 H N N 428 MET HXT H N N 429 PHE N N N N 430 PHE CA C N S 431 PHE C C N N 432 PHE O O N N 433 PHE CB C N N 434 PHE CG C Y N 435 PHE CD1 C Y N 436 PHE CD2 C Y N 437 PHE CE1 C Y N 438 PHE CE2 C Y N 439 PHE CZ C Y N 440 PHE OXT O N N 441 PHE H H N N 442 PHE H2 H N N 443 PHE HA H N N 444 PHE HB2 H N N 445 PHE HB3 H N N 446 PHE HD1 H N N 447 PHE HD2 H N N 448 PHE HE1 H N N 449 PHE HE2 H N N 450 PHE HZ H N N 451 PHE HXT H N N 452 PRO N N N N 453 PRO CA C N S 454 PRO C C N N 455 PRO O O N N 456 PRO CB C N N 457 PRO CG C N N 458 PRO CD C N N 459 PRO OXT O N N 460 PRO H H N N 461 PRO HA H N N 462 PRO HB2 H N N 463 PRO HB3 H N N 464 PRO HG2 H N N 465 PRO HG3 H N N 466 PRO HD2 H N N 467 PRO HD3 H N N 468 PRO HXT H N N 469 SER N N N N 470 SER CA C N S 471 SER C C N N 472 SER O O N N 473 SER CB C N N 474 SER OG O N N 475 SER OXT O N N 476 SER H H N N 477 SER H2 H N N 478 SER HA H N N 479 SER HB2 H N N 480 SER HB3 H N N 481 SER HG H N N 482 SER HXT H N N 483 THR N N N N 484 THR CA C N S 485 THR C C N N 486 THR O O N N 487 THR CB C N R 488 THR OG1 O N N 489 THR CG2 C N N 490 THR OXT O N N 491 THR H H N N 492 THR H2 H N N 493 THR HA H N N 494 THR HB H N N 495 THR HG1 H N N 496 THR HG21 H N N 497 THR HG22 H N N 498 THR HG23 H N N 499 THR HXT H N N 500 TRP N N N N 501 TRP CA C N S 502 TRP C C N N 503 TRP O O N N 504 TRP CB C N N 505 TRP CG C Y N 506 TRP CD1 C Y N 507 TRP CD2 C Y N 508 TRP NE1 N Y N 509 TRP CE2 C Y N 510 TRP CE3 C Y N 511 TRP CZ2 C Y N 512 TRP CZ3 C Y N 513 TRP CH2 C Y N 514 TRP OXT O N N 515 TRP H H N N 516 TRP H2 H N N 517 TRP HA H N N 518 TRP HB2 H N N 519 TRP HB3 H N N 520 TRP HD1 H N N 521 TRP HE1 H N N 522 TRP HE3 H N N 523 TRP HZ2 H N N 524 TRP HZ3 H N N 525 TRP HH2 H N N 526 TRP HXT H N N 527 TYR N N N N 528 TYR CA C N S 529 TYR C C N N 530 TYR O O N N 531 TYR CB C N N 532 TYR CG C Y N 533 TYR CD1 C Y N 534 TYR CD2 C Y N 535 TYR CE1 C Y N 536 TYR CE2 C Y N 537 TYR CZ C Y N 538 TYR OH O N N 539 TYR OXT O N N 540 TYR H H N N 541 TYR H2 H N N 542 TYR HA H N N 543 TYR HB2 H N N 544 TYR HB3 H N N 545 TYR HD1 H N N 546 TYR HD2 H N N 547 TYR HE1 H N N 548 TYR HE2 H N N 549 TYR HH H N N 550 TYR HXT H N N 551 VAL N N N N 552 VAL CA C N S 553 VAL C C N N 554 VAL O O N N 555 VAL CB C N N 556 VAL CG1 C N N 557 VAL CG2 C N N 558 VAL OXT O N N 559 VAL H H N N 560 VAL H2 H N N 561 VAL HA H N N 562 VAL HB H N N 563 VAL HG11 H N N 564 VAL HG12 H N N 565 VAL HG13 H N N 566 VAL HG21 H N N 567 VAL HG22 H N N 568 VAL HG23 H N N 569 VAL HXT H N N 570 ZN ZN ZN N N 571 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5CM N1 C2 sing N N 1 5CM N1 C6 sing N N 2 5CM N1 "C1'" sing N N 3 5CM C2 N3 sing N N 4 5CM C2 O2 doub N N 5 5CM N3 C4 doub N N 6 5CM C4 C5 sing N N 7 5CM C4 N4 sing N N 8 5CM C5 C5A sing N N 9 5CM C5 C6 doub N N 10 5CM C5A H5A1 sing N N 11 5CM C5A H5A2 sing N N 12 5CM C5A H5A3 sing N N 13 5CM C6 H6 sing N N 14 5CM N4 HN41 sing N N 15 5CM N4 HN42 sing N N 16 5CM "C1'" "C2'" sing N N 17 5CM "C1'" "O4'" sing N N 18 5CM "C1'" "H1'" sing N N 19 5CM "C2'" "C3'" sing N N 20 5CM "C2'" "H2'" sing N N 21 5CM "C2'" "H2''" sing N N 22 5CM "C3'" "C4'" sing N N 23 5CM "C3'" "O3'" sing N N 24 5CM "C3'" "H3'" sing N N 25 5CM "C4'" "O4'" sing N N 26 5CM "C4'" "C5'" sing N N 27 5CM "C4'" "H4'" sing N N 28 5CM "O3'" "HO3'" sing N N 29 5CM "C5'" "O5'" sing N N 30 5CM "C5'" "H5'" sing N N 31 5CM "C5'" "H5''" sing N N 32 5CM "O5'" P sing N N 33 5CM P OP1 doub N N 34 5CM P OP2 sing N N 35 5CM P OP3 sing N N 36 5CM OP2 HOP2 sing N N 37 5CM OP3 HOP3 sing N N 38 ALA N CA sing N N 39 ALA N H sing N N 40 ALA N H2 sing N N 41 ALA CA C sing N N 42 ALA CA CB sing N N 43 ALA CA HA sing N N 44 ALA C O doub N N 45 ALA C OXT sing N N 46 ALA CB HB1 sing N N 47 ALA CB HB2 sing N N 48 ALA CB HB3 sing N N 49 ALA OXT HXT sing N N 50 ARG N CA sing N N 51 ARG N H sing N N 52 ARG N H2 sing N N 53 ARG CA C sing N N 54 ARG CA CB sing N N 55 ARG CA HA sing N N 56 ARG C O doub N N 57 ARG C OXT sing N N 58 ARG CB CG sing N N 59 ARG CB HB2 sing N N 60 ARG CB HB3 sing N N 61 ARG CG CD sing N N 62 ARG CG HG2 sing N N 63 ARG CG HG3 sing N N 64 ARG CD NE sing N N 65 ARG CD HD2 sing N N 66 ARG CD HD3 sing N N 67 ARG NE CZ sing N N 68 ARG NE HE sing N N 69 ARG CZ NH1 sing N N 70 ARG CZ NH2 doub N N 71 ARG NH1 HH11 sing N N 72 ARG NH1 HH12 sing N N 73 ARG NH2 HH21 sing N N 74 ARG NH2 HH22 sing N N 75 ARG OXT HXT sing N N 76 ASN N CA sing N N 77 ASN N H sing N N 78 ASN N H2 sing N N 79 ASN CA C sing N N 80 ASN CA CB sing N N 81 ASN CA HA sing N N 82 ASN C O doub N N 83 ASN C OXT sing N N 84 ASN CB CG sing N N 85 ASN CB HB2 sing N N 86 ASN CB HB3 sing N N 87 ASN CG OD1 doub N N 88 ASN CG ND2 sing N N 89 ASN ND2 HD21 sing N N 90 ASN ND2 HD22 sing N N 91 ASN OXT HXT sing N N 92 ASP N CA sing N N 93 ASP N H sing N N 94 ASP N H2 sing N N 95 ASP CA C sing N N 96 ASP CA CB sing N N 97 ASP CA HA sing N N 98 ASP C O doub N N 99 ASP C OXT sing N N 100 ASP CB CG sing N N 101 ASP CB HB2 sing N N 102 ASP CB HB3 sing N N 103 ASP CG OD1 doub N N 104 ASP CG OD2 sing N N 105 ASP OD2 HD2 sing N N 106 ASP OXT HXT sing N N 107 CYS N CA sing N N 108 CYS N H sing N N 109 CYS N H2 sing N N 110 CYS CA C sing N N 111 CYS CA CB sing N N 112 CYS CA HA sing N N 113 CYS C O doub N N 114 CYS C OXT sing N N 115 CYS CB SG sing N N 116 CYS CB HB2 sing N N 117 CYS CB HB3 sing N N 118 CYS SG HG sing N N 119 CYS OXT HXT sing N N 120 DA OP3 P sing N N 121 DA OP3 HOP3 sing N N 122 DA P OP1 doub N N 123 DA P OP2 sing N N 124 DA P "O5'" sing N N 125 DA OP2 HOP2 sing N N 126 DA "O5'" "C5'" sing N N 127 DA "C5'" "C4'" sing N N 128 DA "C5'" "H5'" sing N N 129 DA "C5'" "H5''" sing N N 130 DA "C4'" "O4'" sing N N 131 DA "C4'" "C3'" sing N N 132 DA "C4'" "H4'" sing N N 133 DA "O4'" "C1'" sing N N 134 DA "C3'" "O3'" sing N N 135 DA "C3'" "C2'" sing N N 136 DA "C3'" "H3'" sing N N 137 DA "O3'" "HO3'" sing N N 138 DA "C2'" "C1'" sing N N 139 DA "C2'" "H2'" sing N N 140 DA "C2'" "H2''" sing N N 141 DA "C1'" N9 sing N N 142 DA "C1'" "H1'" sing N N 143 DA N9 C8 sing Y N 144 DA N9 C4 sing Y N 145 DA C8 N7 doub Y N 146 DA C8 H8 sing N N 147 DA N7 C5 sing Y N 148 DA C5 C6 sing Y N 149 DA C5 C4 doub Y N 150 DA C6 N6 sing N N 151 DA C6 N1 doub Y N 152 DA N6 H61 sing N N 153 DA N6 H62 sing N N 154 DA N1 C2 sing Y N 155 DA C2 N3 doub Y N 156 DA C2 H2 sing N N 157 DA N3 C4 sing Y N 158 DC OP3 P sing N N 159 DC OP3 HOP3 sing N N 160 DC P OP1 doub N N 161 DC P OP2 sing N N 162 DC P "O5'" sing N N 163 DC OP2 HOP2 sing N N 164 DC "O5'" "C5'" sing N N 165 DC "C5'" "C4'" sing N N 166 DC "C5'" "H5'" sing N N 167 DC "C5'" "H5''" sing N N 168 DC "C4'" "O4'" sing N N 169 DC "C4'" "C3'" sing N N 170 DC "C4'" "H4'" sing N N 171 DC "O4'" "C1'" sing N N 172 DC "C3'" "O3'" sing N N 173 DC "C3'" "C2'" sing N N 174 DC "C3'" "H3'" sing N N 175 DC "O3'" "HO3'" sing N N 176 DC "C2'" "C1'" sing N N 177 DC "C2'" "H2'" sing N N 178 DC "C2'" "H2''" sing N N 179 DC "C1'" N1 sing N N 180 DC "C1'" "H1'" sing N N 181 DC N1 C2 sing N N 182 DC N1 C6 sing N N 183 DC C2 O2 doub N N 184 DC C2 N3 sing N N 185 DC N3 C4 doub N N 186 DC C4 N4 sing N N 187 DC C4 C5 sing N N 188 DC N4 H41 sing N N 189 DC N4 H42 sing N N 190 DC C5 C6 doub N N 191 DC C5 H5 sing N N 192 DC C6 H6 sing N N 193 DG OP3 P sing N N 194 DG OP3 HOP3 sing N N 195 DG P OP1 doub N N 196 DG P OP2 sing N N 197 DG P "O5'" sing N N 198 DG OP2 HOP2 sing N N 199 DG "O5'" "C5'" sing N N 200 DG "C5'" "C4'" sing N N 201 DG "C5'" "H5'" sing N N 202 DG "C5'" "H5''" sing N N 203 DG "C4'" "O4'" sing N N 204 DG "C4'" "C3'" sing N N 205 DG "C4'" "H4'" sing N N 206 DG "O4'" "C1'" sing N N 207 DG "C3'" "O3'" sing N N 208 DG "C3'" "C2'" sing N N 209 DG "C3'" "H3'" sing N N 210 DG "O3'" "HO3'" sing N N 211 DG "C2'" "C1'" sing N N 212 DG "C2'" "H2'" sing N N 213 DG "C2'" "H2''" sing N N 214 DG "C1'" N9 sing N N 215 DG "C1'" "H1'" sing N N 216 DG N9 C8 sing Y N 217 DG N9 C4 sing Y N 218 DG C8 N7 doub Y N 219 DG C8 H8 sing N N 220 DG N7 C5 sing Y N 221 DG C5 C6 sing N N 222 DG C5 C4 doub Y N 223 DG C6 O6 doub N N 224 DG C6 N1 sing N N 225 DG N1 C2 sing N N 226 DG N1 H1 sing N N 227 DG C2 N2 sing N N 228 DG C2 N3 doub N N 229 DG N2 H21 sing N N 230 DG N2 H22 sing N N 231 DG N3 C4 sing N N 232 DT OP3 P sing N N 233 DT OP3 HOP3 sing N N 234 DT P OP1 doub N N 235 DT P OP2 sing N N 236 DT P "O5'" sing N N 237 DT OP2 HOP2 sing N N 238 DT "O5'" "C5'" sing N N 239 DT "C5'" "C4'" sing N N 240 DT "C5'" "H5'" sing N N 241 DT "C5'" "H5''" sing N N 242 DT "C4'" "O4'" sing N N 243 DT "C4'" "C3'" sing N N 244 DT "C4'" "H4'" sing N N 245 DT "O4'" "C1'" sing N N 246 DT "C3'" "O3'" sing N N 247 DT "C3'" "C2'" sing N N 248 DT "C3'" "H3'" sing N N 249 DT "O3'" "HO3'" sing N N 250 DT "C2'" "C1'" sing N N 251 DT "C2'" "H2'" sing N N 252 DT "C2'" "H2''" sing N N 253 DT "C1'" N1 sing N N 254 DT "C1'" "H1'" sing N N 255 DT N1 C2 sing N N 256 DT N1 C6 sing N N 257 DT C2 O2 doub N N 258 DT C2 N3 sing N N 259 DT N3 C4 sing N N 260 DT N3 H3 sing N N 261 DT C4 O4 doub N N 262 DT C4 C5 sing N N 263 DT C5 C7 sing N N 264 DT C5 C6 doub N N 265 DT C7 H71 sing N N 266 DT C7 H72 sing N N 267 DT C7 H73 sing N N 268 DT C6 H6 sing N N 269 GLN N CA sing N N 270 GLN N H sing N N 271 GLN N H2 sing N N 272 GLN CA C sing N N 273 GLN CA CB sing N N 274 GLN CA HA sing N N 275 GLN C O doub N N 276 GLN C OXT sing N N 277 GLN CB CG sing N N 278 GLN CB HB2 sing N N 279 GLN CB HB3 sing N N 280 GLN CG CD sing N N 281 GLN CG HG2 sing N N 282 GLN CG HG3 sing N N 283 GLN CD OE1 doub N N 284 GLN CD NE2 sing N N 285 GLN NE2 HE21 sing N N 286 GLN NE2 HE22 sing N N 287 GLN OXT HXT sing N N 288 GLU N CA sing N N 289 GLU N H sing N N 290 GLU N H2 sing N N 291 GLU CA C sing N N 292 GLU CA CB sing N N 293 GLU CA HA sing N N 294 GLU C O doub N N 295 GLU C OXT sing N N 296 GLU CB CG sing N N 297 GLU CB HB2 sing N N 298 GLU CB HB3 sing N N 299 GLU CG CD sing N N 300 GLU CG HG2 sing N N 301 GLU CG HG3 sing N N 302 GLU CD OE1 doub N N 303 GLU CD OE2 sing N N 304 GLU OE2 HE2 sing N N 305 GLU OXT HXT sing N N 306 GLY N CA sing N N 307 GLY N H sing N N 308 GLY N H2 sing N N 309 GLY CA C sing N N 310 GLY CA HA2 sing N N 311 GLY CA HA3 sing N N 312 GLY C O doub N N 313 GLY C OXT sing N N 314 GLY OXT HXT sing N N 315 HIS N CA sing N N 316 HIS N H sing N N 317 HIS N H2 sing N N 318 HIS CA C sing N N 319 HIS CA CB sing N N 320 HIS CA HA sing N N 321 HIS C O doub N N 322 HIS C OXT sing N N 323 HIS CB CG sing N N 324 HIS CB HB2 sing N N 325 HIS CB HB3 sing N N 326 HIS CG ND1 sing Y N 327 HIS CG CD2 doub Y N 328 HIS ND1 CE1 doub Y N 329 HIS ND1 HD1 sing N N 330 HIS CD2 NE2 sing Y N 331 HIS CD2 HD2 sing N N 332 HIS CE1 NE2 sing Y N 333 HIS CE1 HE1 sing N N 334 HIS NE2 HE2 sing N N 335 HIS OXT HXT sing N N 336 HOH O H1 sing N N 337 HOH O H2 sing N N 338 ILE N CA sing N N 339 ILE N H sing N N 340 ILE N H2 sing N N 341 ILE CA C sing N N 342 ILE CA CB sing N N 343 ILE CA HA sing N N 344 ILE C O doub N N 345 ILE C OXT sing N N 346 ILE CB CG1 sing N N 347 ILE CB CG2 sing N N 348 ILE CB HB sing N N 349 ILE CG1 CD1 sing N N 350 ILE CG1 HG12 sing N N 351 ILE CG1 HG13 sing N N 352 ILE CG2 HG21 sing N N 353 ILE CG2 HG22 sing N N 354 ILE CG2 HG23 sing N N 355 ILE CD1 HD11 sing N N 356 ILE CD1 HD12 sing N N 357 ILE CD1 HD13 sing N N 358 ILE OXT HXT sing N N 359 LEU N CA sing N N 360 LEU N H sing N N 361 LEU N H2 sing N N 362 LEU CA C sing N N 363 LEU CA CB sing N N 364 LEU CA HA sing N N 365 LEU C O doub N N 366 LEU C OXT sing N N 367 LEU CB CG sing N N 368 LEU CB HB2 sing N N 369 LEU CB HB3 sing N N 370 LEU CG CD1 sing N N 371 LEU CG CD2 sing N N 372 LEU CG HG sing N N 373 LEU CD1 HD11 sing N N 374 LEU CD1 HD12 sing N N 375 LEU CD1 HD13 sing N N 376 LEU CD2 HD21 sing N N 377 LEU CD2 HD22 sing N N 378 LEU CD2 HD23 sing N N 379 LEU OXT HXT sing N N 380 LYS N CA sing N N 381 LYS N H sing N N 382 LYS N H2 sing N N 383 LYS CA C sing N N 384 LYS CA CB sing N N 385 LYS CA HA sing N N 386 LYS C O doub N N 387 LYS C OXT sing N N 388 LYS CB CG sing N N 389 LYS CB HB2 sing N N 390 LYS CB HB3 sing N N 391 LYS CG CD sing N N 392 LYS CG HG2 sing N N 393 LYS CG HG3 sing N N 394 LYS CD CE sing N N 395 LYS CD HD2 sing N N 396 LYS CD HD3 sing N N 397 LYS CE NZ sing N N 398 LYS CE HE2 sing N N 399 LYS CE HE3 sing N N 400 LYS NZ HZ1 sing N N 401 LYS NZ HZ2 sing N N 402 LYS NZ HZ3 sing N N 403 LYS OXT HXT sing N N 404 MET N CA sing N N 405 MET N H sing N N 406 MET N H2 sing N N 407 MET CA C sing N N 408 MET CA CB sing N N 409 MET CA HA sing N N 410 MET C O doub N N 411 MET C OXT sing N N 412 MET CB CG sing N N 413 MET CB HB2 sing N N 414 MET CB HB3 sing N N 415 MET CG SD sing N N 416 MET CG HG2 sing N N 417 MET CG HG3 sing N N 418 MET SD CE sing N N 419 MET CE HE1 sing N N 420 MET CE HE2 sing N N 421 MET CE HE3 sing N N 422 MET OXT HXT sing N N 423 PHE N CA sing N N 424 PHE N H sing N N 425 PHE N H2 sing N N 426 PHE CA C sing N N 427 PHE CA CB sing N N 428 PHE CA HA sing N N 429 PHE C O doub N N 430 PHE C OXT sing N N 431 PHE CB CG sing N N 432 PHE CB HB2 sing N N 433 PHE CB HB3 sing N N 434 PHE CG CD1 doub Y N 435 PHE CG CD2 sing Y N 436 PHE CD1 CE1 sing Y N 437 PHE CD1 HD1 sing N N 438 PHE CD2 CE2 doub Y N 439 PHE CD2 HD2 sing N N 440 PHE CE1 CZ doub Y N 441 PHE CE1 HE1 sing N N 442 PHE CE2 CZ sing Y N 443 PHE CE2 HE2 sing N N 444 PHE CZ HZ sing N N 445 PHE OXT HXT sing N N 446 PRO N CA sing N N 447 PRO N CD sing N N 448 PRO N H sing N N 449 PRO CA C sing N N 450 PRO CA CB sing N N 451 PRO CA HA sing N N 452 PRO C O doub N N 453 PRO C OXT sing N N 454 PRO CB CG sing N N 455 PRO CB HB2 sing N N 456 PRO CB HB3 sing N N 457 PRO CG CD sing N N 458 PRO CG HG2 sing N N 459 PRO CG HG3 sing N N 460 PRO CD HD2 sing N N 461 PRO CD HD3 sing N N 462 PRO OXT HXT sing N N 463 SER N CA sing N N 464 SER N H sing N N 465 SER N H2 sing N N 466 SER CA C sing N N 467 SER CA CB sing N N 468 SER CA HA sing N N 469 SER C O doub N N 470 SER C OXT sing N N 471 SER CB OG sing N N 472 SER CB HB2 sing N N 473 SER CB HB3 sing N N 474 SER OG HG sing N N 475 SER OXT HXT sing N N 476 THR N CA sing N N 477 THR N H sing N N 478 THR N H2 sing N N 479 THR CA C sing N N 480 THR CA CB sing N N 481 THR CA HA sing N N 482 THR C O doub N N 483 THR C OXT sing N N 484 THR CB OG1 sing N N 485 THR CB CG2 sing N N 486 THR CB HB sing N N 487 THR OG1 HG1 sing N N 488 THR CG2 HG21 sing N N 489 THR CG2 HG22 sing N N 490 THR CG2 HG23 sing N N 491 THR OXT HXT sing N N 492 TRP N CA sing N N 493 TRP N H sing N N 494 TRP N H2 sing N N 495 TRP CA C sing N N 496 TRP CA CB sing N N 497 TRP CA HA sing N N 498 TRP C O doub N N 499 TRP C OXT sing N N 500 TRP CB CG sing N N 501 TRP CB HB2 sing N N 502 TRP CB HB3 sing N N 503 TRP CG CD1 doub Y N 504 TRP CG CD2 sing Y N 505 TRP CD1 NE1 sing Y N 506 TRP CD1 HD1 sing N N 507 TRP CD2 CE2 doub Y N 508 TRP CD2 CE3 sing Y N 509 TRP NE1 CE2 sing Y N 510 TRP NE1 HE1 sing N N 511 TRP CE2 CZ2 sing Y N 512 TRP CE3 CZ3 doub Y N 513 TRP CE3 HE3 sing N N 514 TRP CZ2 CH2 doub Y N 515 TRP CZ2 HZ2 sing N N 516 TRP CZ3 CH2 sing Y N 517 TRP CZ3 HZ3 sing N N 518 TRP CH2 HH2 sing N N 519 TRP OXT HXT sing N N 520 TYR N CA sing N N 521 TYR N H sing N N 522 TYR N H2 sing N N 523 TYR CA C sing N N 524 TYR CA CB sing N N 525 TYR CA HA sing N N 526 TYR C O doub N N 527 TYR C OXT sing N N 528 TYR CB CG sing N N 529 TYR CB HB2 sing N N 530 TYR CB HB3 sing N N 531 TYR CG CD1 doub Y N 532 TYR CG CD2 sing Y N 533 TYR CD1 CE1 sing Y N 534 TYR CD1 HD1 sing N N 535 TYR CD2 CE2 doub Y N 536 TYR CD2 HD2 sing N N 537 TYR CE1 CZ doub Y N 538 TYR CE1 HE1 sing N N 539 TYR CE2 CZ sing Y N 540 TYR CE2 HE2 sing N N 541 TYR CZ OH sing N N 542 TYR OH HH sing N N 543 TYR OXT HXT sing N N 544 VAL N CA sing N N 545 VAL N H sing N N 546 VAL N H2 sing N N 547 VAL CA C sing N N 548 VAL CA CB sing N N 549 VAL CA HA sing N N 550 VAL C O doub N N 551 VAL C OXT sing N N 552 VAL CB CG1 sing N N 553 VAL CB CG2 sing N N 554 VAL CB HB sing N N 555 VAL CG1 HG11 sing N N 556 VAL CG1 HG12 sing N N 557 VAL CG1 HG13 sing N N 558 VAL CG2 HG21 sing N N 559 VAL CG2 HG22 sing N N 560 VAL CG2 HG23 sing N N 561 VAL OXT HXT sing N N 562 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6JNM 'double helix' 6JNM 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DT 1 1_555 C DA 12 1_555 -0.290 -0.084 0.114 -21.235 -17.266 3.889 1 D_DT1:DA12_C D 1 ? C 12 ? 20 1 1 B DT 2 1_555 C DA 11 1_555 -0.014 -0.041 -0.080 -7.599 -11.942 -1.017 2 D_DT2:DA11_C D 2 ? C 11 ? 20 1 1 B DC 3 1_555 C DG 10 1_555 0.058 -0.143 0.041 -8.754 -7.688 0.453 3 D_DC3:DG10_C D 3 ? C 10 ? 19 1 1 B DT 4 1_555 C DA 9 1_555 0.046 -0.090 0.120 -0.945 -13.034 -3.790 4 D_DT4:DA9_C D 4 ? C 9 ? 20 1 1 B 5CM 5 1_555 C DG 8 1_555 0.476 -0.250 0.097 -7.625 -13.533 -0.371 5 D_5CM5:DG8_C D 5 ? C 8 ? 19 1 1 B DT 6 1_555 C DA 7 1_555 -0.077 -0.151 -0.050 -1.616 -5.100 2.258 6 D_DT6:DA7_C D 6 ? C 7 ? 20 1 1 B DG 7 1_555 C DC 6 1_555 -0.122 -0.155 0.161 3.234 -12.642 -0.324 7 D_DG7:DC6_C D 7 ? C 6 ? 19 1 1 B DT 8 1_555 C DA 5 1_555 -0.149 -0.188 0.316 -0.983 -12.807 -2.382 8 D_DT8:DA5_C D 8 ? C 5 ? 20 1 1 B DT 9 1_555 C DA 4 1_555 0.060 -0.130 0.076 -0.417 -14.034 0.445 9 D_DT9:DA4_C D 9 ? C 4 ? 20 1 1 B DT 10 1_555 C DA 3 1_555 0.085 -0.089 0.117 -7.751 -13.145 3.534 10 D_DT10:DA3_C D 10 ? C 3 ? 20 1 1 B DT 11 1_555 C DA 2 1_555 0.050 -0.116 -0.080 -6.785 -10.754 1.992 11 D_DT11:DA2_C D 11 ? C 2 ? 20 1 1 B DG 12 1_555 C DC 1 1_555 -0.247 -0.108 0.028 1.024 -10.830 -2.737 12 D_DG12:DC1_C D 12 ? C 1 ? 19 1 1 F DC 1 1_555 E DG 12 1_555 0.311 -0.183 0.080 -2.228 -8.630 -2.439 13 E_DC1:DG12_F E 1 ? F 12 ? 19 1 1 F DA 2 1_555 E DT 11 1_555 -0.160 -0.118 -0.082 7.309 -10.025 1.035 14 E_DA2:DT11_F E 2 ? F 11 ? 20 1 1 F DA 3 1_555 E DT 10 1_555 -0.035 -0.100 0.137 7.262 -13.998 3.202 15 E_DA3:DT10_F E 3 ? F 10 ? 20 1 1 F DA 4 1_555 E DT 9 1_555 0.004 -0.130 0.077 0.857 -13.022 -0.516 16 E_DA4:DT9_F E 4 ? F 9 ? 20 1 1 F DA 5 1_555 E DT 8 1_555 0.233 -0.198 0.339 0.396 -10.509 -1.703 17 E_DA5:DT8_F E 5 ? F 8 ? 20 1 1 F DC 6 1_555 E DG 7 1_555 0.240 -0.118 0.175 -3.751 -13.329 -0.302 18 E_DC6:DG7_F E 6 ? F 7 ? 19 1 1 F DA 7 1_555 E DT 6 1_555 0.074 -0.165 0.047 1.530 -5.976 1.760 19 E_DA7:DT6_F E 7 ? F 6 ? 20 1 1 F DG 8 1_555 E 5CM 5 1_555 -0.493 -0.261 0.192 7.593 -14.560 -0.236 20 E_DG8:5CM5_F E 8 ? F 5 ? 19 1 1 F DA 9 1_555 E DT 4 1_555 -0.092 -0.109 0.112 -0.785 -9.973 -4.688 21 E_DA9:DT4_F E 9 ? F 4 ? 20 1 1 F DG 10 1_555 E DC 3 1_555 -0.106 -0.151 -0.039 7.504 -8.550 0.588 22 E_DG10:DC3_F E 10 ? F 3 ? 19 1 1 F DA 11 1_555 E DT 2 1_555 0.026 -0.078 -0.129 7.743 -11.837 -0.097 23 E_DA11:DT2_F E 11 ? F 2 ? 20 1 1 F DA 12 1_555 E DT 1 1_555 0.210 -0.151 0.045 21.340 -15.538 4.518 24 E_DA12:DT1_F E 12 ? F 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DT 1 1_555 C DA 12 1_555 B DT 2 1_555 C DA 11 1_555 -0.539 -0.041 3.062 1.167 0.152 35.161 -0.089 1.055 3.043 0.252 -1.932 35.180 1 DD_DT1DT2:DA11DA12_CC D 1 ? C 12 ? D 2 ? C 11 ? 1 B DT 2 1_555 C DA 11 1_555 B DC 3 1_555 C DG 10 1_555 1.403 0.205 3.273 3.074 1.168 38.608 0.163 -1.732 3.375 1.762 -4.638 38.743 2 DD_DT2DC3:DG10DA11_CC D 2 ? C 11 ? D 3 ? C 10 ? 1 B DC 3 1_555 C DG 10 1_555 B DT 4 1_555 C DA 9 1_555 -1.222 -0.163 3.275 -1.290 1.182 30.084 -0.556 2.086 3.314 2.274 2.482 30.133 3 DD_DC3DT4:DA9DG10_CC D 3 ? C 10 ? D 4 ? C 9 ? 1 B DT 4 1_555 C DA 9 1_555 B 5CM 5 1_555 C DG 8 1_555 0.221 -0.565 3.390 0.849 5.257 35.419 -1.694 -0.234 3.279 8.581 -1.386 35.804 4 DD_DT45CM5:DG8DA9_CC D 4 ? C 9 ? D 5 ? C 8 ? 1 B 5CM 5 1_555 C DG 8 1_555 B DT 6 1_555 C DA 7 1_555 -0.072 0.224 3.172 1.254 6.995 24.962 -1.393 0.499 3.110 15.780 -2.828 25.939 5 DD_5CM5DT6:DA7DG8_CC D 5 ? C 8 ? D 6 ? C 7 ? 1 B DT 6 1_555 C DA 7 1_555 B DG 7 1_555 C DC 6 1_555 -0.697 1.148 3.229 -5.885 2.758 41.160 1.320 0.350 3.360 3.893 8.308 41.648 6 DD_DT6DG7:DC6DA7_CC D 6 ? C 7 ? D 7 ? C 6 ? 1 B DG 7 1_555 C DC 6 1_555 B DT 8 1_555 C DA 5 1_555 0.183 -0.637 3.386 -1.717 -1.261 34.501 -0.870 -0.583 3.393 -2.123 2.891 34.565 7 DD_DG7DT8:DA5DC6_CC D 7 ? C 6 ? D 8 ? C 5 ? 1 B DT 8 1_555 C DA 5 1_555 B DT 9 1_555 C DA 4 1_555 -0.376 -0.584 3.189 0.197 -5.682 36.991 -0.173 0.611 3.238 -8.890 -0.308 37.410 8 DD_DT8DT9:DA4DA5_CC D 8 ? C 5 ? D 9 ? C 4 ? 1 B DT 9 1_555 C DA 4 1_555 B DT 10 1_555 C DA 3 1_555 -0.055 -0.311 3.346 -0.320 -2.010 38.177 -0.215 0.042 3.357 -3.071 0.489 38.229 9 DD_DT9DT10:DA3DA4_CC D 9 ? C 4 ? D 10 ? C 3 ? 1 B DT 10 1_555 C DA 3 1_555 B DT 11 1_555 C DA 2 1_555 -0.187 -0.067 3.191 0.038 -1.287 37.310 0.061 0.297 3.191 -2.011 -0.059 37.331 10 DD_DT10DT11:DA2DA3_CC D 10 ? C 3 ? D 11 ? C 2 ? 1 B DT 11 1_555 C DA 2 1_555 B DG 12 1_555 C DC 1 1_555 -0.023 0.393 3.209 -5.209 8.164 33.244 -0.596 -0.762 3.181 13.907 8.874 34.587 11 DD_DT11DG12:DC1DA2_CC D 11 ? C 2 ? D 12 ? C 1 ? 1 B DG 12 1_555 C DC 1 1_555 F DC 1 1_555 E DG 12 1_555 -0.020 -0.608 3.325 -0.974 1.173 30.176 -1.407 -0.163 3.299 2.251 1.869 30.214 12 DE_DG12DC1:DG12DC1_FC D 12 ? C 1 ? E 1 ? F 12 ? 1 F DC 1 1_555 E DG 12 1_555 F DA 2 1_555 E DT 11 1_555 -0.042 0.346 3.160 5.561 7.626 31.901 -0.644 0.985 3.107 13.510 -9.852 33.233 13 EE_DC1DA2:DT11DG12_FF E 1 ? F 12 ? E 2 ? F 11 ? 1 F DA 2 1_555 E DT 11 1_555 F DA 3 1_555 E DT 10 1_555 0.137 -0.107 3.208 -0.593 -1.637 38.742 0.035 -0.278 3.207 -2.466 0.893 38.780 14 EE_DA2DA3:DT10DT11_FF E 2 ? F 11 ? E 3 ? F 10 ? 1 F DA 3 1_555 E DT 10 1_555 F DA 4 1_555 E DT 9 1_555 0.085 -0.283 3.332 0.882 -2.551 37.057 -0.096 -0.013 3.345 -4.007 -1.385 37.152 15 EE_DA3DA4:DT9DT10_FF E 3 ? F 10 ? E 4 ? F 9 ? 1 F DA 4 1_555 E DT 9 1_555 F DA 5 1_555 E DT 8 1_555 0.391 -0.625 3.206 -0.881 -4.956 37.397 -0.332 -0.718 3.250 -7.686 1.367 37.722 16 EE_DA4DA5:DT8DT9_FF E 4 ? F 9 ? E 5 ? F 8 ? 1 F DA 5 1_555 E DT 8 1_555 F DC 6 1_555 E DG 7 1_555 -0.165 -0.644 3.388 2.010 -1.961 35.078 -0.761 0.584 3.403 -3.248 -3.328 35.187 17 EE_DA5DC6:DG7DT8_FF E 5 ? F 8 ? E 6 ? F 7 ? 1 F DC 6 1_555 E DG 7 1_555 F DA 7 1_555 E DT 6 1_555 0.656 1.188 3.205 5.398 2.229 40.130 1.466 -0.342 3.321 3.228 -7.817 40.536 18 EE_DC6DA7:DT6DG7_FF E 6 ? F 7 ? E 7 ? F 6 ? 1 F DA 7 1_555 E DT 6 1_555 F DG 8 1_555 E 5CM 5 1_555 0.069 0.123 3.167 -1.779 7.317 25.152 -1.653 -0.619 3.067 16.340 3.972 26.237 19 EE_DA7DG8:5CM5DT6_FF E 7 ? F 6 ? E 8 ? F 5 ? 1 F DG 8 1_555 E 5CM 5 1_555 F DA 9 1_555 E DT 4 1_555 -0.226 -0.621 3.424 -0.796 5.675 35.302 -1.857 0.250 3.292 9.283 1.301 35.750 20 EE_DG8DA9:DT45CM5_FF E 8 ? F 5 ? E 9 ? F 4 ? 1 F DA 9 1_555 E DT 4 1_555 F DG 10 1_555 E DC 3 1_555 1.150 -0.133 3.300 1.951 0.492 30.546 -0.352 -1.785 3.363 0.933 -3.697 30.611 21 EE_DA9DG10:DC3DT4_FF E 9 ? F 4 ? E 10 ? F 3 ? 1 F DG 10 1_555 E DC 3 1_555 F DA 11 1_555 E DT 2 1_555 -1.366 0.240 3.224 -3.206 0.950 38.912 0.244 1.657 3.327 1.423 4.801 39.050 22 EE_DG10DA11:DT2DC3_FF E 10 ? F 3 ? E 11 ? F 2 ? 1 F DA 11 1_555 E DT 2 1_555 F DA 12 1_555 E DT 1 1_555 0.483 -0.015 3.059 -1.452 1.350 33.645 -0.231 -1.054 3.033 2.329 2.506 33.702 23 EE_DA11DA12:DT1DT2_FF E 11 ? F 2 ? E 12 ? F 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6JNL _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #