data_6NF9 # _entry.id 6NF9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6NF9 pdb_00006nf9 10.2210/pdb6nf9/pdb WWPDB D_1000236077 ? ? EMDB EMD-9363 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-01-23 2 'Structure model' 1 1 2019-03-13 3 'Structure model' 1 2 2019-12-18 4 'Structure model' 1 3 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' Other 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' atom_sites 4 3 'Structure model' pdbx_audit_support 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' database_2 8 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.title' 3 2 'Structure model' '_citation_author.name' 4 3 'Structure model' '_atom_sites.fract_transf_matrix[1][1]' 5 3 'Structure model' '_atom_sites.fract_transf_matrix[2][2]' 6 3 'Structure model' '_atom_sites.fract_transf_matrix[3][3]' 7 3 'Structure model' '_pdbx_audit_support.funding_organization' 8 4 'Structure model' '_database_2.pdbx_DOI' 9 4 'Structure model' '_database_2.pdbx_database_accession' 10 4 'Structure model' '_pdbx_struct_oper_list.name' 11 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 12 4 'Structure model' '_pdbx_struct_oper_list.type' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6NF9 _pdbx_database_status.recvd_initial_deposition_date 2018-12-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Mus spretus EVE VLP' _pdbx_database_related.db_id EMD-9363 _pdbx_database_related.content_type 'associated EM volume' # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Callaway, H.M.' 1 ? 'Subramanian, S.' 2 0000-0003-0771-5757 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Virol.' _citation.journal_id_ASTM JOVIAM _citation.journal_id_CSD 0825 _citation.journal_id_ISSN 1098-5514 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 93 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Examination and Reconstruction of Three Ancient Endogenous Parvovirus Capsid Protein Gene Remnants Found in Rodent Genomes.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1128/JVI.01542-18 _citation.pdbx_database_id_PubMed 30626673 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Callaway, H.M.' 1 ? primary 'Subramanian, S.' 2 ? primary 'Urbina, C.A.' 3 ? primary 'Barnard, K.N.' 4 ? primary 'Dick, R.A.' 5 ? primary 'Bator, C.M.' 6 ? primary 'Hafenstein, S.L.' 7 ? primary 'Gifford, R.J.' 8 0000-0003-4028-9884 primary 'Parrish, C.R.' 9 0000-0002-1836-6655 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Mus Spretus Endogenous Viral Element' _entity.formula_weight 63760.590 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSHDAQPNEQPNTGIELATGGNGSGSSGGGGRGAGGVGVSTGSFNNQTEFHYLGDGLVQITAHASRLVHLNMPEHESYRR INVLNSEAGVAGQMVQDDAHSQMVTPWSLVDANAWGVWFNPGDWQLITNNMTELNLVSFEQEIFNVVLKTITESATTPPT KIYNNDLTASLMVALDTNNTLPYTPAAPRSETLGFYPWLPTKPTHYRYYMTCTRNLTPPTHTGQAGTITNTISAPTHSDV MFYTIENAVPIHLLRTGDEFSTGTYYFDTKPLKMTHSWQTNRSLGLPPKLATEPTTEGQQHTGTLKAATDREGIHQTINN SYTEATALRPAQVGYNTPYMNFEYSDGGPFLTPIVPVYDTQYNADEPNGAYRITMGYQHGQITTATELGRYTLNPISKGG RAPNQEFNQSSPLQMENTLNGTLLPTDPIGGKTDIHFTNTLNTYGPLTALNNTPPIYPNGQIWDKELDADLKPRLHVTAP FVCKNNPPGQLFVKIAPNLTDDFNADSPQQPRIITYSNFWWKGTLTFTARMRSSNMWNPIHQHTTTNDNIVNYMPSNIGG MRLYPEIPQLIPRKLY ; _entity_poly.pdbx_seq_one_letter_code_can ;MSHDAQPNEQPNTGIELATGGNGSGSSGGGGRGAGGVGVSTGSFNNQTEFHYLGDGLVQITAHASRLVHLNMPEHESYRR INVLNSEAGVAGQMVQDDAHSQMVTPWSLVDANAWGVWFNPGDWQLITNNMTELNLVSFEQEIFNVVLKTITESATTPPT KIYNNDLTASLMVALDTNNTLPYTPAAPRSETLGFYPWLPTKPTHYRYYMTCTRNLTPPTHTGQAGTITNTISAPTHSDV MFYTIENAVPIHLLRTGDEFSTGTYYFDTKPLKMTHSWQTNRSLGLPPKLATEPTTEGQQHTGTLKAATDREGIHQTINN SYTEATALRPAQVGYNTPYMNFEYSDGGPFLTPIVPVYDTQYNADEPNGAYRITMGYQHGQITTATELGRYTLNPISKGG RAPNQEFNQSSPLQMENTLNGTLLPTDPIGGKTDIHFTNTLNTYGPLTALNNTPPIYPNGQIWDKELDADLKPRLHVTAP FVCKNNPPGQLFVKIAPNLTDDFNADSPQQPRIITYSNFWWKGTLTFTARMRSSNMWNPIHQHTTTNDNIVNYMPSNIGG MRLYPEIPQLIPRKLY ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 HIS n 1 4 ASP n 1 5 ALA n 1 6 GLN n 1 7 PRO n 1 8 ASN n 1 9 GLU n 1 10 GLN n 1 11 PRO n 1 12 ASN n 1 13 THR n 1 14 GLY n 1 15 ILE n 1 16 GLU n 1 17 LEU n 1 18 ALA n 1 19 THR n 1 20 GLY n 1 21 GLY n 1 22 ASN n 1 23 GLY n 1 24 SER n 1 25 GLY n 1 26 SER n 1 27 SER n 1 28 GLY n 1 29 GLY n 1 30 GLY n 1 31 GLY n 1 32 ARG n 1 33 GLY n 1 34 ALA n 1 35 GLY n 1 36 GLY n 1 37 VAL n 1 38 GLY n 1 39 VAL n 1 40 SER n 1 41 THR n 1 42 GLY n 1 43 SER n 1 44 PHE n 1 45 ASN n 1 46 ASN n 1 47 GLN n 1 48 THR n 1 49 GLU n 1 50 PHE n 1 51 HIS n 1 52 TYR n 1 53 LEU n 1 54 GLY n 1 55 ASP n 1 56 GLY n 1 57 LEU n 1 58 VAL n 1 59 GLN n 1 60 ILE n 1 61 THR n 1 62 ALA n 1 63 HIS n 1 64 ALA n 1 65 SER n 1 66 ARG n 1 67 LEU n 1 68 VAL n 1 69 HIS n 1 70 LEU n 1 71 ASN n 1 72 MET n 1 73 PRO n 1 74 GLU n 1 75 HIS n 1 76 GLU n 1 77 SER n 1 78 TYR n 1 79 ARG n 1 80 ARG n 1 81 ILE n 1 82 ASN n 1 83 VAL n 1 84 LEU n 1 85 ASN n 1 86 SER n 1 87 GLU n 1 88 ALA n 1 89 GLY n 1 90 VAL n 1 91 ALA n 1 92 GLY n 1 93 GLN n 1 94 MET n 1 95 VAL n 1 96 GLN n 1 97 ASP n 1 98 ASP n 1 99 ALA n 1 100 HIS n 1 101 SER n 1 102 GLN n 1 103 MET n 1 104 VAL n 1 105 THR n 1 106 PRO n 1 107 TRP n 1 108 SER n 1 109 LEU n 1 110 VAL n 1 111 ASP n 1 112 ALA n 1 113 ASN n 1 114 ALA n 1 115 TRP n 1 116 GLY n 1 117 VAL n 1 118 TRP n 1 119 PHE n 1 120 ASN n 1 121 PRO n 1 122 GLY n 1 123 ASP n 1 124 TRP n 1 125 GLN n 1 126 LEU n 1 127 ILE n 1 128 THR n 1 129 ASN n 1 130 ASN n 1 131 MET n 1 132 THR n 1 133 GLU n 1 134 LEU n 1 135 ASN n 1 136 LEU n 1 137 VAL n 1 138 SER n 1 139 PHE n 1 140 GLU n 1 141 GLN n 1 142 GLU n 1 143 ILE n 1 144 PHE n 1 145 ASN n 1 146 VAL n 1 147 VAL n 1 148 LEU n 1 149 LYS n 1 150 THR n 1 151 ILE n 1 152 THR n 1 153 GLU n 1 154 SER n 1 155 ALA n 1 156 THR n 1 157 THR n 1 158 PRO n 1 159 PRO n 1 160 THR n 1 161 LYS n 1 162 ILE n 1 163 TYR n 1 164 ASN n 1 165 ASN n 1 166 ASP n 1 167 LEU n 1 168 THR n 1 169 ALA n 1 170 SER n 1 171 LEU n 1 172 MET n 1 173 VAL n 1 174 ALA n 1 175 LEU n 1 176 ASP n 1 177 THR n 1 178 ASN n 1 179 ASN n 1 180 THR n 1 181 LEU n 1 182 PRO n 1 183 TYR n 1 184 THR n 1 185 PRO n 1 186 ALA n 1 187 ALA n 1 188 PRO n 1 189 ARG n 1 190 SER n 1 191 GLU n 1 192 THR n 1 193 LEU n 1 194 GLY n 1 195 PHE n 1 196 TYR n 1 197 PRO n 1 198 TRP n 1 199 LEU n 1 200 PRO n 1 201 THR n 1 202 LYS n 1 203 PRO n 1 204 THR n 1 205 HIS n 1 206 TYR n 1 207 ARG n 1 208 TYR n 1 209 TYR n 1 210 MET n 1 211 THR n 1 212 CYS n 1 213 THR n 1 214 ARG n 1 215 ASN n 1 216 LEU n 1 217 THR n 1 218 PRO n 1 219 PRO n 1 220 THR n 1 221 HIS n 1 222 THR n 1 223 GLY n 1 224 GLN n 1 225 ALA n 1 226 GLY n 1 227 THR n 1 228 ILE n 1 229 THR n 1 230 ASN n 1 231 THR n 1 232 ILE n 1 233 SER n 1 234 ALA n 1 235 PRO n 1 236 THR n 1 237 HIS n 1 238 SER n 1 239 ASP n 1 240 VAL n 1 241 MET n 1 242 PHE n 1 243 TYR n 1 244 THR n 1 245 ILE n 1 246 GLU n 1 247 ASN n 1 248 ALA n 1 249 VAL n 1 250 PRO n 1 251 ILE n 1 252 HIS n 1 253 LEU n 1 254 LEU n 1 255 ARG n 1 256 THR n 1 257 GLY n 1 258 ASP n 1 259 GLU n 1 260 PHE n 1 261 SER n 1 262 THR n 1 263 GLY n 1 264 THR n 1 265 TYR n 1 266 TYR n 1 267 PHE n 1 268 ASP n 1 269 THR n 1 270 LYS n 1 271 PRO n 1 272 LEU n 1 273 LYS n 1 274 MET n 1 275 THR n 1 276 HIS n 1 277 SER n 1 278 TRP n 1 279 GLN n 1 280 THR n 1 281 ASN n 1 282 ARG n 1 283 SER n 1 284 LEU n 1 285 GLY n 1 286 LEU n 1 287 PRO n 1 288 PRO n 1 289 LYS n 1 290 LEU n 1 291 ALA n 1 292 THR n 1 293 GLU n 1 294 PRO n 1 295 THR n 1 296 THR n 1 297 GLU n 1 298 GLY n 1 299 GLN n 1 300 GLN n 1 301 HIS n 1 302 THR n 1 303 GLY n 1 304 THR n 1 305 LEU n 1 306 LYS n 1 307 ALA n 1 308 ALA n 1 309 THR n 1 310 ASP n 1 311 ARG n 1 312 GLU n 1 313 GLY n 1 314 ILE n 1 315 HIS n 1 316 GLN n 1 317 THR n 1 318 ILE n 1 319 ASN n 1 320 ASN n 1 321 SER n 1 322 TYR n 1 323 THR n 1 324 GLU n 1 325 ALA n 1 326 THR n 1 327 ALA n 1 328 LEU n 1 329 ARG n 1 330 PRO n 1 331 ALA n 1 332 GLN n 1 333 VAL n 1 334 GLY n 1 335 TYR n 1 336 ASN n 1 337 THR n 1 338 PRO n 1 339 TYR n 1 340 MET n 1 341 ASN n 1 342 PHE n 1 343 GLU n 1 344 TYR n 1 345 SER n 1 346 ASP n 1 347 GLY n 1 348 GLY n 1 349 PRO n 1 350 PHE n 1 351 LEU n 1 352 THR n 1 353 PRO n 1 354 ILE n 1 355 VAL n 1 356 PRO n 1 357 VAL n 1 358 TYR n 1 359 ASP n 1 360 THR n 1 361 GLN n 1 362 TYR n 1 363 ASN n 1 364 ALA n 1 365 ASP n 1 366 GLU n 1 367 PRO n 1 368 ASN n 1 369 GLY n 1 370 ALA n 1 371 TYR n 1 372 ARG n 1 373 ILE n 1 374 THR n 1 375 MET n 1 376 GLY n 1 377 TYR n 1 378 GLN n 1 379 HIS n 1 380 GLY n 1 381 GLN n 1 382 ILE n 1 383 THR n 1 384 THR n 1 385 ALA n 1 386 THR n 1 387 GLU n 1 388 LEU n 1 389 GLY n 1 390 ARG n 1 391 TYR n 1 392 THR n 1 393 LEU n 1 394 ASN n 1 395 PRO n 1 396 ILE n 1 397 SER n 1 398 LYS n 1 399 GLY n 1 400 GLY n 1 401 ARG n 1 402 ALA n 1 403 PRO n 1 404 ASN n 1 405 GLN n 1 406 GLU n 1 407 PHE n 1 408 ASN n 1 409 GLN n 1 410 SER n 1 411 SER n 1 412 PRO n 1 413 LEU n 1 414 GLN n 1 415 MET n 1 416 GLU n 1 417 ASN n 1 418 THR n 1 419 LEU n 1 420 ASN n 1 421 GLY n 1 422 THR n 1 423 LEU n 1 424 LEU n 1 425 PRO n 1 426 THR n 1 427 ASP n 1 428 PRO n 1 429 ILE n 1 430 GLY n 1 431 GLY n 1 432 LYS n 1 433 THR n 1 434 ASP n 1 435 ILE n 1 436 HIS n 1 437 PHE n 1 438 THR n 1 439 ASN n 1 440 THR n 1 441 LEU n 1 442 ASN n 1 443 THR n 1 444 TYR n 1 445 GLY n 1 446 PRO n 1 447 LEU n 1 448 THR n 1 449 ALA n 1 450 LEU n 1 451 ASN n 1 452 ASN n 1 453 THR n 1 454 PRO n 1 455 PRO n 1 456 ILE n 1 457 TYR n 1 458 PRO n 1 459 ASN n 1 460 GLY n 1 461 GLN n 1 462 ILE n 1 463 TRP n 1 464 ASP n 1 465 LYS n 1 466 GLU n 1 467 LEU n 1 468 ASP n 1 469 ALA n 1 470 ASP n 1 471 LEU n 1 472 LYS n 1 473 PRO n 1 474 ARG n 1 475 LEU n 1 476 HIS n 1 477 VAL n 1 478 THR n 1 479 ALA n 1 480 PRO n 1 481 PHE n 1 482 VAL n 1 483 CYS n 1 484 LYS n 1 485 ASN n 1 486 ASN n 1 487 PRO n 1 488 PRO n 1 489 GLY n 1 490 GLN n 1 491 LEU n 1 492 PHE n 1 493 VAL n 1 494 LYS n 1 495 ILE n 1 496 ALA n 1 497 PRO n 1 498 ASN n 1 499 LEU n 1 500 THR n 1 501 ASP n 1 502 ASP n 1 503 PHE n 1 504 ASN n 1 505 ALA n 1 506 ASP n 1 507 SER n 1 508 PRO n 1 509 GLN n 1 510 GLN n 1 511 PRO n 1 512 ARG n 1 513 ILE n 1 514 ILE n 1 515 THR n 1 516 TYR n 1 517 SER n 1 518 ASN n 1 519 PHE n 1 520 TRP n 1 521 TRP n 1 522 LYS n 1 523 GLY n 1 524 THR n 1 525 LEU n 1 526 THR n 1 527 PHE n 1 528 THR n 1 529 ALA n 1 530 ARG n 1 531 MET n 1 532 ARG n 1 533 SER n 1 534 SER n 1 535 ASN n 1 536 MET n 1 537 TRP n 1 538 ASN n 1 539 PRO n 1 540 ILE n 1 541 HIS n 1 542 GLN n 1 543 HIS n 1 544 THR n 1 545 THR n 1 546 THR n 1 547 ASN n 1 548 ASP n 1 549 ASN n 1 550 ILE n 1 551 VAL n 1 552 ASN n 1 553 TYR n 1 554 MET n 1 555 PRO n 1 556 SER n 1 557 ASN n 1 558 ILE n 1 559 GLY n 1 560 GLY n 1 561 MET n 1 562 ARG n 1 563 LEU n 1 564 TYR n 1 565 PRO n 1 566 GLU n 1 567 ILE n 1 568 PRO n 1 569 GLN n 1 570 LEU n 1 571 ILE n 1 572 PRO n 1 573 ARG n 1 574 LYS n 1 575 LEU n 1 576 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 576 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus spretus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10096 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Trichoplusia ni' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7111 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 3 ? ? ? A . n A 1 2 SER 2 4 ? ? ? A . n A 1 3 HIS 3 5 ? ? ? A . n A 1 4 ASP 4 6 ? ? ? A . n A 1 5 ALA 5 7 ? ? ? A . n A 1 6 GLN 6 8 ? ? ? A . n A 1 7 PRO 7 9 ? ? ? A . n A 1 8 ASN 8 10 ? ? ? A . n A 1 9 GLU 9 11 ? ? ? A . n A 1 10 GLN 10 12 ? ? ? A . n A 1 11 PRO 11 13 ? ? ? A . n A 1 12 ASN 12 14 ? ? ? A . n A 1 13 THR 13 15 ? ? ? A . n A 1 14 GLY 14 16 ? ? ? A . n A 1 15 ILE 15 17 ? ? ? A . n A 1 16 GLU 16 18 ? ? ? A . n A 1 17 LEU 17 19 ? ? ? A . n A 1 18 ALA 18 20 ? ? ? A . n A 1 19 THR 19 21 ? ? ? A . n A 1 20 GLY 20 22 ? ? ? A . n A 1 21 GLY 21 23 ? ? ? A . n A 1 22 ASN 22 24 ? ? ? A . n A 1 23 GLY 23 25 ? ? ? A . n A 1 24 SER 24 26 ? ? ? A . n A 1 25 GLY 25 27 ? ? ? A . n A 1 26 SER 26 28 ? ? ? A . n A 1 27 SER 27 29 ? ? ? A . n A 1 28 GLY 28 30 ? ? ? A . n A 1 29 GLY 29 31 ? ? ? A . n A 1 30 GLY 30 32 ? ? ? A . n A 1 31 GLY 31 33 ? ? ? A . n A 1 32 ARG 32 34 ? ? ? A . n A 1 33 GLY 33 35 ? ? ? A . n A 1 34 ALA 34 36 ? ? ? A . n A 1 35 GLY 35 37 ? ? ? A . n A 1 36 GLY 36 38 38 GLY GLY A . n A 1 37 VAL 37 39 39 VAL VAL A . n A 1 38 GLY 38 40 40 GLY GLY A . n A 1 39 VAL 39 41 41 VAL VAL A . n A 1 40 SER 40 42 42 SER SER A . n A 1 41 THR 41 43 43 THR THR A . n A 1 42 GLY 42 44 44 GLY GLY A . n A 1 43 SER 43 45 45 SER SER A . n A 1 44 PHE 44 46 46 PHE PHE A . n A 1 45 ASN 45 47 47 ASN ASN A . n A 1 46 ASN 46 48 48 ASN ASN A . n A 1 47 GLN 47 49 49 GLN GLN A . n A 1 48 THR 48 50 50 THR THR A . n A 1 49 GLU 49 51 51 GLU GLU A . n A 1 50 PHE 50 52 52 PHE PHE A . n A 1 51 HIS 51 53 53 HIS HIS A . n A 1 52 TYR 52 54 54 TYR TYR A . n A 1 53 LEU 53 55 55 LEU LEU A . n A 1 54 GLY 54 56 56 GLY GLY A . n A 1 55 ASP 55 57 57 ASP ASP A . n A 1 56 GLY 56 58 58 GLY GLY A . n A 1 57 LEU 57 59 59 LEU LEU A . n A 1 58 VAL 58 60 60 VAL VAL A . n A 1 59 GLN 59 61 61 GLN GLN A . n A 1 60 ILE 60 62 62 ILE ILE A . n A 1 61 THR 61 63 63 THR THR A . n A 1 62 ALA 62 64 64 ALA ALA A . n A 1 63 HIS 63 65 65 HIS HIS A . n A 1 64 ALA 64 66 66 ALA ALA A . n A 1 65 SER 65 67 67 SER SER A . n A 1 66 ARG 66 68 68 ARG ARG A . n A 1 67 LEU 67 69 69 LEU LEU A . n A 1 68 VAL 68 70 70 VAL VAL A . n A 1 69 HIS 69 71 71 HIS HIS A . n A 1 70 LEU 70 72 72 LEU LEU A . n A 1 71 ASN 71 73 73 ASN ASN A . n A 1 72 MET 72 74 74 MET MET A . n A 1 73 PRO 73 75 75 PRO PRO A . n A 1 74 GLU 74 76 76 GLU GLU A . n A 1 75 HIS 75 77 77 HIS HIS A . n A 1 76 GLU 76 78 78 GLU GLU A . n A 1 77 SER 77 79 79 SER SER A . n A 1 78 TYR 78 80 80 TYR TYR A . n A 1 79 ARG 79 81 81 ARG ARG A . n A 1 80 ARG 80 82 82 ARG ARG A . n A 1 81 ILE 81 83 83 ILE ILE A . n A 1 82 ASN 82 84 84 ASN ASN A . n A 1 83 VAL 83 85 85 VAL VAL A . n A 1 84 LEU 84 86 86 LEU LEU A . n A 1 85 ASN 85 87 87 ASN ASN A . n A 1 86 SER 86 88 88 SER SER A . n A 1 87 GLU 87 89 89 GLU GLU A . n A 1 88 ALA 88 90 90 ALA ALA A . n A 1 89 GLY 89 91 91 GLY GLY A . n A 1 90 VAL 90 92 92 VAL VAL A . n A 1 91 ALA 91 93 93 ALA ALA A . n A 1 92 GLY 92 94 94 GLY GLY A . n A 1 93 GLN 93 95 95 GLN GLN A . n A 1 94 MET 94 96 96 MET MET A . n A 1 95 VAL 95 97 97 VAL VAL A . n A 1 96 GLN 96 98 98 GLN GLN A . n A 1 97 ASP 97 99 99 ASP ASP A . n A 1 98 ASP 98 100 100 ASP ASP A . n A 1 99 ALA 99 101 101 ALA ALA A . n A 1 100 HIS 100 102 102 HIS HIS A . n A 1 101 SER 101 103 103 SER SER A . n A 1 102 GLN 102 104 104 GLN GLN A . n A 1 103 MET 103 105 105 MET MET A . n A 1 104 VAL 104 106 106 VAL VAL A . n A 1 105 THR 105 107 107 THR THR A . n A 1 106 PRO 106 108 108 PRO PRO A . n A 1 107 TRP 107 109 109 TRP TRP A . n A 1 108 SER 108 110 110 SER SER A . n A 1 109 LEU 109 111 111 LEU LEU A . n A 1 110 VAL 110 112 112 VAL VAL A . n A 1 111 ASP 111 113 113 ASP ASP A . n A 1 112 ALA 112 114 114 ALA ALA A . n A 1 113 ASN 113 115 115 ASN ASN A . n A 1 114 ALA 114 116 116 ALA ALA A . n A 1 115 TRP 115 117 117 TRP TRP A . n A 1 116 GLY 116 118 118 GLY GLY A . n A 1 117 VAL 117 119 119 VAL VAL A . n A 1 118 TRP 118 120 120 TRP TRP A . n A 1 119 PHE 119 121 121 PHE PHE A . n A 1 120 ASN 120 122 122 ASN ASN A . n A 1 121 PRO 121 123 123 PRO PRO A . n A 1 122 GLY 122 124 124 GLY GLY A . n A 1 123 ASP 123 125 125 ASP ASP A . n A 1 124 TRP 124 126 126 TRP TRP A . n A 1 125 GLN 125 127 127 GLN GLN A . n A 1 126 LEU 126 128 128 LEU LEU A . n A 1 127 ILE 127 129 129 ILE ILE A . n A 1 128 THR 128 130 130 THR THR A . n A 1 129 ASN 129 131 131 ASN ASN A . n A 1 130 ASN 130 132 132 ASN ASN A . n A 1 131 MET 131 133 133 MET MET A . n A 1 132 THR 132 134 134 THR THR A . n A 1 133 GLU 133 135 135 GLU GLU A . n A 1 134 LEU 134 136 136 LEU LEU A . n A 1 135 ASN 135 137 137 ASN ASN A . n A 1 136 LEU 136 138 138 LEU LEU A . n A 1 137 VAL 137 139 139 VAL VAL A . n A 1 138 SER 138 140 140 SER SER A . n A 1 139 PHE 139 141 141 PHE PHE A . n A 1 140 GLU 140 142 142 GLU GLU A . n A 1 141 GLN 141 143 143 GLN GLN A . n A 1 142 GLU 142 144 144 GLU GLU A . n A 1 143 ILE 143 145 145 ILE ILE A . n A 1 144 PHE 144 146 146 PHE PHE A . n A 1 145 ASN 145 147 147 ASN ASN A . n A 1 146 VAL 146 148 148 VAL VAL A . n A 1 147 VAL 147 149 149 VAL VAL A . n A 1 148 LEU 148 150 150 LEU LEU A . n A 1 149 LYS 149 151 151 LYS LYS A . n A 1 150 THR 150 152 152 THR THR A . n A 1 151 ILE 151 153 153 ILE ILE A . n A 1 152 THR 152 154 154 THR THR A . n A 1 153 GLU 153 155 155 GLU GLU A . n A 1 154 SER 154 156 156 SER SER A . n A 1 155 ALA 155 157 157 ALA ALA A . n A 1 156 THR 156 158 158 THR THR A . n A 1 157 THR 157 159 159 THR THR A . n A 1 158 PRO 158 160 160 PRO PRO A . n A 1 159 PRO 159 161 161 PRO PRO A . n A 1 160 THR 160 162 162 THR THR A . n A 1 161 LYS 161 163 163 LYS LYS A . n A 1 162 ILE 162 164 164 ILE ILE A . n A 1 163 TYR 163 165 165 TYR TYR A . n A 1 164 ASN 164 166 166 ASN ASN A . n A 1 165 ASN 165 167 167 ASN ASN A . n A 1 166 ASP 166 168 168 ASP ASP A . n A 1 167 LEU 167 169 169 LEU LEU A . n A 1 168 THR 168 170 170 THR THR A . n A 1 169 ALA 169 171 171 ALA ALA A . n A 1 170 SER 170 172 172 SER SER A . n A 1 171 LEU 171 173 173 LEU LEU A . n A 1 172 MET 172 174 174 MET MET A . n A 1 173 VAL 173 175 175 VAL VAL A . n A 1 174 ALA 174 176 176 ALA ALA A . n A 1 175 LEU 175 177 177 LEU LEU A . n A 1 176 ASP 176 178 178 ASP ASP A . n A 1 177 THR 177 179 179 THR THR A . n A 1 178 ASN 178 180 180 ASN ASN A . n A 1 179 ASN 179 181 181 ASN ASN A . n A 1 180 THR 180 182 182 THR THR A . n A 1 181 LEU 181 183 183 LEU LEU A . n A 1 182 PRO 182 184 184 PRO PRO A . n A 1 183 TYR 183 185 185 TYR TYR A . n A 1 184 THR 184 186 186 THR THR A . n A 1 185 PRO 185 187 187 PRO PRO A . n A 1 186 ALA 186 188 188 ALA ALA A . n A 1 187 ALA 187 189 189 ALA ALA A . n A 1 188 PRO 188 190 190 PRO PRO A . n A 1 189 ARG 189 191 191 ARG ARG A . n A 1 190 SER 190 192 192 SER SER A . n A 1 191 GLU 191 193 193 GLU GLU A . n A 1 192 THR 192 194 194 THR THR A . n A 1 193 LEU 193 195 195 LEU LEU A . n A 1 194 GLY 194 196 196 GLY GLY A . n A 1 195 PHE 195 197 197 PHE PHE A . n A 1 196 TYR 196 198 198 TYR TYR A . n A 1 197 PRO 197 199 199 PRO PRO A . n A 1 198 TRP 198 200 200 TRP TRP A . n A 1 199 LEU 199 201 201 LEU LEU A . n A 1 200 PRO 200 202 202 PRO PRO A . n A 1 201 THR 201 203 203 THR THR A . n A 1 202 LYS 202 204 204 LYS LYS A . n A 1 203 PRO 203 205 205 PRO PRO A . n A 1 204 THR 204 206 206 THR THR A . n A 1 205 HIS 205 207 207 HIS HIS A . n A 1 206 TYR 206 208 208 TYR TYR A . n A 1 207 ARG 207 209 209 ARG ARG A . n A 1 208 TYR 208 210 210 TYR TYR A . n A 1 209 TYR 209 211 211 TYR TYR A . n A 1 210 MET 210 212 212 MET MET A . n A 1 211 THR 211 213 213 THR THR A . n A 1 212 CYS 212 214 214 CYS CYS A . n A 1 213 THR 213 215 215 THR THR A . n A 1 214 ARG 214 216 216 ARG ARG A . n A 1 215 ASN 215 217 217 ASN ASN A . n A 1 216 LEU 216 218 218 LEU LEU A . n A 1 217 THR 217 219 219 THR THR A . n A 1 218 PRO 218 220 220 PRO PRO A . n A 1 219 PRO 219 221 221 PRO PRO A . n A 1 220 THR 220 222 222 THR THR A . n A 1 221 HIS 221 223 223 HIS HIS A . n A 1 222 THR 222 224 224 THR THR A . n A 1 223 GLY 223 225 225 GLY GLY A . n A 1 224 GLN 224 226 226 GLN GLN A . n A 1 225 ALA 225 227 227 ALA ALA A . n A 1 226 GLY 226 228 228 GLY GLY A . n A 1 227 THR 227 229 229 THR THR A . n A 1 228 ILE 228 230 230 ILE ILE A . n A 1 229 THR 229 231 231 THR THR A . n A 1 230 ASN 230 232 232 ASN ASN A . n A 1 231 THR 231 233 233 THR THR A . n A 1 232 ILE 232 234 234 ILE ILE A . n A 1 233 SER 233 235 235 SER SER A . n A 1 234 ALA 234 236 236 ALA ALA A . n A 1 235 PRO 235 237 237 PRO PRO A . n A 1 236 THR 236 238 238 THR THR A . n A 1 237 HIS 237 239 239 HIS HIS A . n A 1 238 SER 238 240 240 SER SER A . n A 1 239 ASP 239 241 241 ASP ASP A . n A 1 240 VAL 240 242 242 VAL VAL A . n A 1 241 MET 241 243 243 MET MET A . n A 1 242 PHE 242 244 244 PHE PHE A . n A 1 243 TYR 243 245 245 TYR TYR A . n A 1 244 THR 244 246 246 THR THR A . n A 1 245 ILE 245 247 247 ILE ILE A . n A 1 246 GLU 246 248 248 GLU GLU A . n A 1 247 ASN 247 249 249 ASN ASN A . n A 1 248 ALA 248 250 250 ALA ALA A . n A 1 249 VAL 249 251 251 VAL VAL A . n A 1 250 PRO 250 252 252 PRO PRO A . n A 1 251 ILE 251 253 253 ILE ILE A . n A 1 252 HIS 252 254 254 HIS HIS A . n A 1 253 LEU 253 255 255 LEU LEU A . n A 1 254 LEU 254 256 256 LEU LEU A . n A 1 255 ARG 255 257 257 ARG ARG A . n A 1 256 THR 256 258 258 THR THR A . n A 1 257 GLY 257 259 259 GLY GLY A . n A 1 258 ASP 258 260 260 ASP ASP A . n A 1 259 GLU 259 261 261 GLU GLU A . n A 1 260 PHE 260 262 262 PHE PHE A . n A 1 261 SER 261 263 263 SER SER A . n A 1 262 THR 262 264 264 THR THR A . n A 1 263 GLY 263 265 265 GLY GLY A . n A 1 264 THR 264 266 266 THR THR A . n A 1 265 TYR 265 267 267 TYR TYR A . n A 1 266 TYR 266 268 268 TYR TYR A . n A 1 267 PHE 267 269 269 PHE PHE A . n A 1 268 ASP 268 270 270 ASP ASP A . n A 1 269 THR 269 271 271 THR THR A . n A 1 270 LYS 270 272 272 LYS LYS A . n A 1 271 PRO 271 273 273 PRO PRO A . n A 1 272 LEU 272 274 274 LEU LEU A . n A 1 273 LYS 273 275 275 LYS LYS A . n A 1 274 MET 274 276 276 MET MET A . n A 1 275 THR 275 277 277 THR THR A . n A 1 276 HIS 276 278 278 HIS HIS A . n A 1 277 SER 277 279 279 SER SER A . n A 1 278 TRP 278 280 280 TRP TRP A . n A 1 279 GLN 279 281 281 GLN GLN A . n A 1 280 THR 280 282 282 THR THR A . n A 1 281 ASN 281 283 283 ASN ASN A . n A 1 282 ARG 282 284 284 ARG ARG A . n A 1 283 SER 283 285 285 SER SER A . n A 1 284 LEU 284 286 286 LEU LEU A . n A 1 285 GLY 285 287 287 GLY GLY A . n A 1 286 LEU 286 288 288 LEU LEU A . n A 1 287 PRO 287 289 289 PRO PRO A . n A 1 288 PRO 288 290 290 PRO PRO A . n A 1 289 LYS 289 291 291 LYS LYS A . n A 1 290 LEU 290 292 292 LEU LEU A . n A 1 291 ALA 291 293 293 ALA ALA A . n A 1 292 THR 292 294 294 THR THR A . n A 1 293 GLU 293 295 295 GLU GLU A . n A 1 294 PRO 294 296 296 PRO PRO A . n A 1 295 THR 295 297 297 THR THR A . n A 1 296 THR 296 298 298 THR THR A . n A 1 297 GLU 297 299 299 GLU GLU A . n A 1 298 GLY 298 300 300 GLY GLY A . n A 1 299 GLN 299 301 301 GLN GLN A . n A 1 300 GLN 300 302 302 GLN GLN A . n A 1 301 HIS 301 303 303 HIS HIS A . n A 1 302 THR 302 304 304 THR THR A . n A 1 303 GLY 303 305 305 GLY GLY A . n A 1 304 THR 304 306 306 THR THR A . n A 1 305 LEU 305 307 307 LEU LEU A . n A 1 306 LYS 306 308 308 LYS LYS A . n A 1 307 ALA 307 309 309 ALA ALA A . n A 1 308 ALA 308 310 310 ALA ALA A . n A 1 309 THR 309 311 311 THR THR A . n A 1 310 ASP 310 312 312 ASP ASP A . n A 1 311 ARG 311 313 313 ARG ARG A . n A 1 312 GLU 312 314 314 GLU GLU A . n A 1 313 GLY 313 315 315 GLY GLY A . n A 1 314 ILE 314 316 316 ILE ILE A . n A 1 315 HIS 315 317 317 HIS HIS A . n A 1 316 GLN 316 318 318 GLN GLN A . n A 1 317 THR 317 319 319 THR THR A . n A 1 318 ILE 318 320 320 ILE ILE A . n A 1 319 ASN 319 321 321 ASN ASN A . n A 1 320 ASN 320 322 322 ASN ASN A . n A 1 321 SER 321 323 323 SER SER A . n A 1 322 TYR 322 324 324 TYR TYR A . n A 1 323 THR 323 325 325 THR THR A . n A 1 324 GLU 324 326 326 GLU GLU A . n A 1 325 ALA 325 327 327 ALA ALA A . n A 1 326 THR 326 328 328 THR THR A . n A 1 327 ALA 327 329 329 ALA ALA A . n A 1 328 LEU 328 330 330 LEU LEU A . n A 1 329 ARG 329 331 331 ARG ARG A . n A 1 330 PRO 330 332 332 PRO PRO A . n A 1 331 ALA 331 333 333 ALA ALA A . n A 1 332 GLN 332 334 334 GLN GLN A . n A 1 333 VAL 333 335 335 VAL VAL A . n A 1 334 GLY 334 336 336 GLY GLY A . n A 1 335 TYR 335 337 337 TYR TYR A . n A 1 336 ASN 336 338 338 ASN ASN A . n A 1 337 THR 337 339 339 THR THR A . n A 1 338 PRO 338 340 340 PRO PRO A . n A 1 339 TYR 339 341 341 TYR TYR A . n A 1 340 MET 340 342 342 MET MET A . n A 1 341 ASN 341 343 343 ASN ASN A . n A 1 342 PHE 342 344 344 PHE PHE A . n A 1 343 GLU 343 345 345 GLU GLU A . n A 1 344 TYR 344 346 346 TYR TYR A . n A 1 345 SER 345 347 347 SER SER A . n A 1 346 ASP 346 348 348 ASP ASP A . n A 1 347 GLY 347 349 349 GLY GLY A . n A 1 348 GLY 348 350 350 GLY GLY A . n A 1 349 PRO 349 351 351 PRO PRO A . n A 1 350 PHE 350 352 352 PHE PHE A . n A 1 351 LEU 351 353 353 LEU LEU A . n A 1 352 THR 352 354 354 THR THR A . n A 1 353 PRO 353 355 355 PRO PRO A . n A 1 354 ILE 354 356 356 ILE ILE A . n A 1 355 VAL 355 357 357 VAL VAL A . n A 1 356 PRO 356 358 358 PRO PRO A . n A 1 357 VAL 357 359 359 VAL VAL A . n A 1 358 TYR 358 360 360 TYR TYR A . n A 1 359 ASP 359 361 361 ASP ASP A . n A 1 360 THR 360 362 362 THR THR A . n A 1 361 GLN 361 363 363 GLN GLN A . n A 1 362 TYR 362 364 364 TYR TYR A . n A 1 363 ASN 363 365 365 ASN ASN A . n A 1 364 ALA 364 366 366 ALA ALA A . n A 1 365 ASP 365 367 367 ASP ASP A . n A 1 366 GLU 366 368 368 GLU GLU A . n A 1 367 PRO 367 369 369 PRO PRO A . n A 1 368 ASN 368 370 370 ASN ASN A . n A 1 369 GLY 369 371 371 GLY GLY A . n A 1 370 ALA 370 372 372 ALA ALA A . n A 1 371 TYR 371 373 373 TYR TYR A . n A 1 372 ARG 372 374 374 ARG ARG A . n A 1 373 ILE 373 375 375 ILE ILE A . n A 1 374 THR 374 376 376 THR THR A . n A 1 375 MET 375 377 377 MET MET A . n A 1 376 GLY 376 378 378 GLY GLY A . n A 1 377 TYR 377 379 379 TYR TYR A . n A 1 378 GLN 378 380 380 GLN GLN A . n A 1 379 HIS 379 381 381 HIS HIS A . n A 1 380 GLY 380 382 382 GLY GLY A . n A 1 381 GLN 381 383 383 GLN GLN A . n A 1 382 ILE 382 384 384 ILE ILE A . n A 1 383 THR 383 385 385 THR THR A . n A 1 384 THR 384 386 386 THR THR A . n A 1 385 ALA 385 387 387 ALA ALA A . n A 1 386 THR 386 388 388 THR THR A . n A 1 387 GLU 387 389 389 GLU GLU A . n A 1 388 LEU 388 390 390 LEU LEU A . n A 1 389 GLY 389 391 391 GLY GLY A . n A 1 390 ARG 390 392 392 ARG ARG A . n A 1 391 TYR 391 393 393 TYR TYR A . n A 1 392 THR 392 394 394 THR THR A . n A 1 393 LEU 393 395 395 LEU LEU A . n A 1 394 ASN 394 396 396 ASN ASN A . n A 1 395 PRO 395 397 397 PRO PRO A . n A 1 396 ILE 396 398 398 ILE ILE A . n A 1 397 SER 397 399 399 SER SER A . n A 1 398 LYS 398 400 400 LYS LYS A . n A 1 399 GLY 399 401 401 GLY GLY A . n A 1 400 GLY 400 402 402 GLY GLY A . n A 1 401 ARG 401 403 403 ARG ARG A . n A 1 402 ALA 402 404 404 ALA ALA A . n A 1 403 PRO 403 405 405 PRO PRO A . n A 1 404 ASN 404 406 406 ASN ASN A . n A 1 405 GLN 405 407 407 GLN GLN A . n A 1 406 GLU 406 408 408 GLU GLU A . n A 1 407 PHE 407 409 409 PHE PHE A . n A 1 408 ASN 408 410 410 ASN ASN A . n A 1 409 GLN 409 411 411 GLN GLN A . n A 1 410 SER 410 412 412 SER SER A . n A 1 411 SER 411 413 413 SER SER A . n A 1 412 PRO 412 414 414 PRO PRO A . n A 1 413 LEU 413 415 415 LEU LEU A . n A 1 414 GLN 414 416 416 GLN GLN A . n A 1 415 MET 415 417 417 MET MET A . n A 1 416 GLU 416 418 418 GLU GLU A . n A 1 417 ASN 417 419 419 ASN ASN A . n A 1 418 THR 418 420 420 THR THR A . n A 1 419 LEU 419 421 421 LEU LEU A . n A 1 420 ASN 420 422 422 ASN ASN A . n A 1 421 GLY 421 423 423 GLY GLY A . n A 1 422 THR 422 424 424 THR THR A . n A 1 423 LEU 423 425 425 LEU LEU A . n A 1 424 LEU 424 426 426 LEU LEU A . n A 1 425 PRO 425 427 427 PRO PRO A . n A 1 426 THR 426 428 428 THR THR A . n A 1 427 ASP 427 429 429 ASP ASP A . n A 1 428 PRO 428 430 430 PRO PRO A . n A 1 429 ILE 429 431 431 ILE ILE A . n A 1 430 GLY 430 432 432 GLY GLY A . n A 1 431 GLY 431 433 433 GLY GLY A . n A 1 432 LYS 432 434 434 LYS LYS A . n A 1 433 THR 433 435 435 THR THR A . n A 1 434 ASP 434 436 436 ASP ASP A . n A 1 435 ILE 435 437 437 ILE ILE A . n A 1 436 HIS 436 438 438 HIS HIS A . n A 1 437 PHE 437 439 439 PHE PHE A . n A 1 438 THR 438 440 440 THR THR A . n A 1 439 ASN 439 441 441 ASN ASN A . n A 1 440 THR 440 442 442 THR THR A . n A 1 441 LEU 441 443 443 LEU LEU A . n A 1 442 ASN 442 444 444 ASN ASN A . n A 1 443 THR 443 445 445 THR THR A . n A 1 444 TYR 444 446 446 TYR TYR A . n A 1 445 GLY 445 447 447 GLY GLY A . n A 1 446 PRO 446 448 448 PRO PRO A . n A 1 447 LEU 447 449 449 LEU LEU A . n A 1 448 THR 448 450 450 THR THR A . n A 1 449 ALA 449 451 451 ALA ALA A . n A 1 450 LEU 450 452 452 LEU LEU A . n A 1 451 ASN 451 453 453 ASN ASN A . n A 1 452 ASN 452 454 454 ASN ASN A . n A 1 453 THR 453 455 455 THR THR A . n A 1 454 PRO 454 456 456 PRO PRO A . n A 1 455 PRO 455 457 457 PRO PRO A . n A 1 456 ILE 456 458 458 ILE ILE A . n A 1 457 TYR 457 459 459 TYR TYR A . n A 1 458 PRO 458 460 460 PRO PRO A . n A 1 459 ASN 459 461 461 ASN ASN A . n A 1 460 GLY 460 462 462 GLY GLY A . n A 1 461 GLN 461 463 463 GLN GLN A . n A 1 462 ILE 462 464 464 ILE ILE A . n A 1 463 TRP 463 465 465 TRP TRP A . n A 1 464 ASP 464 466 466 ASP ASP A . n A 1 465 LYS 465 467 467 LYS LYS A . n A 1 466 GLU 466 468 468 GLU GLU A . n A 1 467 LEU 467 469 469 LEU LEU A . n A 1 468 ASP 468 470 470 ASP ASP A . n A 1 469 ALA 469 471 471 ALA ALA A . n A 1 470 ASP 470 472 472 ASP ASP A . n A 1 471 LEU 471 473 473 LEU LEU A . n A 1 472 LYS 472 474 474 LYS LYS A . n A 1 473 PRO 473 475 475 PRO PRO A . n A 1 474 ARG 474 476 476 ARG ARG A . n A 1 475 LEU 475 477 477 LEU LEU A . n A 1 476 HIS 476 478 478 HIS HIS A . n A 1 477 VAL 477 479 479 VAL VAL A . n A 1 478 THR 478 480 480 THR THR A . n A 1 479 ALA 479 481 481 ALA ALA A . n A 1 480 PRO 480 482 482 PRO PRO A . n A 1 481 PHE 481 483 483 PHE PHE A . n A 1 482 VAL 482 484 484 VAL VAL A . n A 1 483 CYS 483 485 485 CYS CYS A . n A 1 484 LYS 484 486 486 LYS LYS A . n A 1 485 ASN 485 487 487 ASN ASN A . n A 1 486 ASN 486 488 488 ASN ASN A . n A 1 487 PRO 487 489 489 PRO PRO A . n A 1 488 PRO 488 490 490 PRO PRO A . n A 1 489 GLY 489 491 491 GLY GLY A . n A 1 490 GLN 490 492 492 GLN GLN A . n A 1 491 LEU 491 493 493 LEU LEU A . n A 1 492 PHE 492 494 494 PHE PHE A . n A 1 493 VAL 493 495 495 VAL VAL A . n A 1 494 LYS 494 496 496 LYS LYS A . n A 1 495 ILE 495 497 497 ILE ILE A . n A 1 496 ALA 496 498 498 ALA ALA A . n A 1 497 PRO 497 499 499 PRO PRO A . n A 1 498 ASN 498 500 500 ASN ASN A . n A 1 499 LEU 499 501 501 LEU LEU A . n A 1 500 THR 500 502 502 THR THR A . n A 1 501 ASP 501 503 503 ASP ASP A . n A 1 502 ASP 502 504 504 ASP ASP A . n A 1 503 PHE 503 505 505 PHE PHE A . n A 1 504 ASN 504 506 506 ASN ASN A . n A 1 505 ALA 505 507 507 ALA ALA A . n A 1 506 ASP 506 508 508 ASP ASP A . n A 1 507 SER 507 509 509 SER SER A . n A 1 508 PRO 508 510 510 PRO PRO A . n A 1 509 GLN 509 511 511 GLN GLN A . n A 1 510 GLN 510 512 512 GLN GLN A . n A 1 511 PRO 511 513 513 PRO PRO A . n A 1 512 ARG 512 514 514 ARG ARG A . n A 1 513 ILE 513 515 515 ILE ILE A . n A 1 514 ILE 514 516 516 ILE ILE A . n A 1 515 THR 515 517 517 THR THR A . n A 1 516 TYR 516 518 518 TYR TYR A . n A 1 517 SER 517 519 519 SER SER A . n A 1 518 ASN 518 520 520 ASN ASN A . n A 1 519 PHE 519 521 521 PHE PHE A . n A 1 520 TRP 520 522 522 TRP TRP A . n A 1 521 TRP 521 523 523 TRP TRP A . n A 1 522 LYS 522 524 524 LYS LYS A . n A 1 523 GLY 523 525 525 GLY GLY A . n A 1 524 THR 524 526 526 THR THR A . n A 1 525 LEU 525 527 527 LEU LEU A . n A 1 526 THR 526 528 528 THR THR A . n A 1 527 PHE 527 529 529 PHE PHE A . n A 1 528 THR 528 530 530 THR THR A . n A 1 529 ALA 529 531 531 ALA ALA A . n A 1 530 ARG 530 532 532 ARG ARG A . n A 1 531 MET 531 533 533 MET MET A . n A 1 532 ARG 532 534 534 ARG ARG A . n A 1 533 SER 533 535 535 SER SER A . n A 1 534 SER 534 536 536 SER SER A . n A 1 535 ASN 535 537 537 ASN ASN A . n A 1 536 MET 536 538 538 MET MET A . n A 1 537 TRP 537 539 539 TRP TRP A . n A 1 538 ASN 538 540 540 ASN ASN A . n A 1 539 PRO 539 541 541 PRO PRO A . n A 1 540 ILE 540 542 542 ILE ILE A . n A 1 541 HIS 541 543 543 HIS HIS A . n A 1 542 GLN 542 544 544 GLN GLN A . n A 1 543 HIS 543 545 545 HIS HIS A . n A 1 544 THR 544 546 546 THR THR A . n A 1 545 THR 545 547 547 THR THR A . n A 1 546 THR 546 548 548 THR THR A . n A 1 547 ASN 547 549 549 ASN ASN A . n A 1 548 ASP 548 550 550 ASP ASP A . n A 1 549 ASN 549 551 551 ASN ASN A . n A 1 550 ILE 550 552 552 ILE ILE A . n A 1 551 VAL 551 553 553 VAL VAL A . n A 1 552 ASN 552 554 554 ASN ASN A . n A 1 553 TYR 553 555 555 TYR TYR A . n A 1 554 MET 554 556 556 MET MET A . n A 1 555 PRO 555 557 557 PRO PRO A . n A 1 556 SER 556 558 558 SER SER A . n A 1 557 ASN 557 559 559 ASN ASN A . n A 1 558 ILE 558 560 560 ILE ILE A . n A 1 559 GLY 559 561 561 GLY GLY A . n A 1 560 GLY 560 562 562 GLY GLY A . n A 1 561 MET 561 563 563 MET MET A . n A 1 562 ARG 562 564 564 ARG ARG A . n A 1 563 LEU 563 565 565 LEU LEU A . n A 1 564 TYR 564 566 566 TYR TYR A . n A 1 565 PRO 565 567 567 PRO PRO A . n A 1 566 GLU 566 568 568 GLU GLU A . n A 1 567 ILE 567 569 569 ILE ILE A . n A 1 568 PRO 568 570 570 PRO PRO A . n A 1 569 GLN 569 571 571 GLN GLN A . n A 1 570 LEU 570 572 572 LEU LEU A . n A 1 571 ILE 571 573 573 ILE ILE A . n A 1 572 PRO 572 574 574 PRO PRO A . n A 1 573 ARG 573 575 575 ARG ARG A . n A 1 574 LYS 574 576 576 LYS LYS A . n A 1 575 LEU 575 577 577 LEU LEU A . n A 1 576 TYR 576 578 578 TYR TYR A . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6NF9 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1 _cell.length_a_esd ? _cell.length_b 1 _cell.length_b_esd ? _cell.length_c 1 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 1 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NF9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6NF9 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 6NF9 _struct.title 'Structure of M. spretus Endogenous Virus Element (EVE) Virus-like particle (VLP)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6NF9 _struct_keywords.text 'Mus spretus, VLP, EVE, VIRUS LIKE PARTICLE' _struct_keywords.pdbx_keywords 'VIRUS LIKE PARTICLE' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6NF9 _struct_ref.pdbx_db_accession 6NF9 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6NF9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 576 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6NF9 _struct_ref_seq.db_align_beg 3 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 578 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 3 _struct_ref_seq.pdbx_auth_seq_align_end 578 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'complete icosahedral assembly' ? 60-meric 60 2 'icosahedral asymmetric unit' ? monomeric 1 3 'icosahedral pentamer' ? pentameric 5 4 'icosahedral 23 hexamer' ? hexameric 6 5 'icosahedral asymmetric unit, std point frame' ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-60)' A 2 1 A 3 '(1-5)' A 4 '(1,2,6,10,23,24)' A 5 P A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support microscopy _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] P 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'point symmetry operation' ? ? 0.30901699 -0.80901699 0.50000000 0.00000 0.80901699 0.50000000 0.30901699 0.00000 -0.50000000 0.30901699 0.80901699 0.00000 3 'point symmetry operation' ? ? -0.80901699 -0.50000000 0.30901699 0.00000 0.50000000 -0.30901699 0.80901699 0.00000 -0.30901699 0.80901699 0.50000000 0.00000 4 'point symmetry operation' ? ? -0.80901699 0.50000000 -0.30901699 0.00000 -0.50000000 -0.30901699 0.80901699 0.00000 0.30901699 0.80901699 0.50000000 0.00000 5 'point symmetry operation' ? ? 0.30901699 0.80901699 -0.50000000 0.00000 -0.80901699 0.50000000 0.30901699 0.00000 0.50000000 0.30901699 0.80901699 0.00000 6 'point symmetry operation' ? ? -1.00000000 0.00000000 0.00000000 0.00000 0.00000000 -1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 7 'point symmetry operation' ? ? -0.30901699 0.80901699 -0.50000000 0.00000 -0.80901699 -0.50000000 -0.30901699 0.00000 -0.50000000 0.30901699 0.80901699 0.00000 8 'point symmetry operation' ? ? 0.80901699 0.50000000 -0.30901699 0.00000 -0.50000000 0.30901699 -0.80901699 0.00000 -0.30901699 0.80901699 0.50000000 0.00000 9 'point symmetry operation' ? ? 0.80901699 -0.50000000 0.30901699 0.00000 0.50000000 0.30901699 -0.80901699 0.00000 0.30901699 0.80901699 0.50000000 0.00000 10 'point symmetry operation' ? ? -0.30901699 -0.80901699 0.50000000 0.00000 0.80901699 -0.50000000 -0.30901699 0.00000 0.50000000 0.30901699 0.80901699 0.00000 11 'point symmetry operation' ? ? -1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 0.00000 12 'point symmetry operation' ? ? -0.30901699 0.80901699 -0.50000000 0.00000 0.80901699 0.50000000 0.30901699 0.00000 0.50000000 -0.30901699 -0.80901699 0.00000 13 'point symmetry operation' ? ? 0.80901699 0.50000000 -0.30901699 0.00000 0.50000000 -0.30901699 0.80901699 0.00000 0.30901699 -0.80901699 -0.50000000 0.00000 14 'point symmetry operation' ? ? 0.80901699 -0.50000000 0.30901699 0.00000 -0.50000000 -0.30901699 0.80901699 0.00000 -0.30901699 -0.80901699 -0.50000000 0.00000 15 'point symmetry operation' ? ? -0.30901699 -0.80901699 0.50000000 0.00000 -0.80901699 0.50000000 0.30901699 0.00000 -0.50000000 -0.30901699 -0.80901699 0.00000 16 'point symmetry operation' ? ? 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 -1.00000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 0.00000 17 'point symmetry operation' ? ? 0.30901699 -0.80901699 0.50000000 0.00000 -0.80901699 -0.50000000 -0.30901699 0.00000 0.50000000 -0.30901699 -0.80901699 0.00000 18 'point symmetry operation' ? ? -0.80901699 -0.50000000 0.30901699 0.00000 -0.50000000 0.30901699 -0.80901699 0.00000 0.30901699 -0.80901699 -0.50000000 0.00000 19 'point symmetry operation' ? ? -0.80901699 0.50000000 -0.30901699 0.00000 0.50000000 0.30901699 -0.80901699 0.00000 -0.30901699 -0.80901699 -0.50000000 0.00000 20 'point symmetry operation' ? ? 0.30901699 0.80901699 -0.50000000 0.00000 0.80901699 -0.50000000 -0.30901699 0.00000 -0.50000000 -0.30901699 -0.80901699 0.00000 21 'point symmetry operation' ? ? 0.00000000 0.00000000 1.00000000 0.00000 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 22 'point symmetry operation' ? ? -0.50000000 0.30901699 0.80901699 0.00000 0.30901699 -0.80901699 0.50000000 0.00000 0.80901699 0.50000000 0.30901699 0.00000 23 'point symmetry operation' ? ? -0.30901699 0.80901699 0.50000000 0.00000 -0.80901699 -0.50000000 0.30901699 0.00000 0.50000000 -0.30901699 0.80901699 0.00000 24 'point symmetry operation' ? ? 0.30901699 0.80901699 0.50000000 0.00000 -0.80901699 0.50000000 -0.30901699 0.00000 -0.50000000 -0.30901699 0.80901699 0.00000 25 'point symmetry operation' ? ? 0.50000000 0.30901699 0.80901699 0.00000 0.30901699 0.80901699 -0.50000000 0.00000 -0.80901699 0.50000000 0.30901699 0.00000 26 'point symmetry operation' ? ? 0.00000000 0.00000000 1.00000000 0.00000 -1.00000000 0.00000000 0.00000000 0.00000 0.00000000 -1.00000000 0.00000000 0.00000 27 'point symmetry operation' ? ? -0.50000000 0.30901699 0.80901699 0.00000 -0.30901699 0.80901699 -0.50000000 0.00000 -0.80901699 -0.50000000 -0.30901699 0.00000 28 'point symmetry operation' ? ? -0.30901699 0.80901699 0.50000000 0.00000 0.80901699 0.50000000 -0.30901699 0.00000 -0.50000000 0.30901699 -0.80901699 0.00000 29 'point symmetry operation' ? ? 0.30901699 0.80901699 0.50000000 0.00000 0.80901699 -0.50000000 0.30901699 0.00000 0.50000000 0.30901699 -0.80901699 0.00000 30 'point symmetry operation' ? ? 0.50000000 0.30901699 0.80901699 0.00000 -0.30901699 -0.80901699 0.50000000 0.00000 0.80901699 -0.50000000 -0.30901699 0.00000 31 'point symmetry operation' ? ? 0.00000000 0.00000000 -1.00000000 0.00000 -1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 32 'point symmetry operation' ? ? 0.50000000 -0.30901699 -0.80901699 0.00000 -0.30901699 0.80901699 -0.50000000 0.00000 0.80901699 0.50000000 0.30901699 0.00000 33 'point symmetry operation' ? ? 0.30901699 -0.80901699 -0.50000000 0.00000 0.80901699 0.50000000 -0.30901699 0.00000 0.50000000 -0.30901699 0.80901699 0.00000 34 'point symmetry operation' ? ? -0.30901699 -0.80901699 -0.50000000 0.00000 0.80901699 -0.50000000 0.30901699 0.00000 -0.50000000 -0.30901699 0.80901699 0.00000 35 'point symmetry operation' ? ? -0.50000000 -0.30901699 -0.80901699 0.00000 -0.30901699 -0.80901699 0.50000000 0.00000 -0.80901699 0.50000000 0.30901699 0.00000 36 'point symmetry operation' ? ? 0.00000000 0.00000000 -1.00000000 0.00000 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 -1.00000000 0.00000000 0.00000 37 'point symmetry operation' ? ? 0.50000000 -0.30901699 -0.80901699 0.00000 0.30901699 -0.80901699 0.50000000 0.00000 -0.80901699 -0.50000000 -0.30901699 0.00000 38 'point symmetry operation' ? ? 0.30901699 -0.80901699 -0.50000000 0.00000 -0.80901699 -0.50000000 0.30901699 0.00000 -0.50000000 0.30901699 -0.80901699 0.00000 39 'point symmetry operation' ? ? -0.30901699 -0.80901699 -0.50000000 0.00000 -0.80901699 0.50000000 -0.30901699 0.00000 0.50000000 0.30901699 -0.80901699 0.00000 40 'point symmetry operation' ? ? -0.50000000 -0.30901699 -0.80901699 0.00000 0.30901699 0.80901699 -0.50000000 0.00000 0.80901699 -0.50000000 -0.30901699 0.00000 41 'point symmetry operation' ? ? 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 1.00000000 0.00000000 0.00000000 0.00000 42 'point symmetry operation' ? ? 0.80901699 0.50000000 0.30901699 0.00000 -0.50000000 0.30901699 0.80901699 0.00000 0.30901699 -0.80901699 0.50000000 0.00000 43 'point symmetry operation' ? ? 0.50000000 -0.30901699 0.80901699 0.00000 -0.30901699 0.80901699 0.50000000 0.00000 -0.80901699 -0.50000000 0.30901699 0.00000 44 'point symmetry operation' ? ? -0.50000000 -0.30901699 0.80901699 0.00000 0.30901699 0.80901699 0.50000000 0.00000 -0.80901699 0.50000000 -0.30901699 0.00000 45 'point symmetry operation' ? ? -0.80901699 0.50000000 0.30901699 0.00000 0.50000000 0.30901699 0.80901699 0.00000 0.30901699 0.80901699 -0.50000000 0.00000 46 'point symmetry operation' ? ? 0.00000000 -1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 -1.00000000 0.00000000 0.00000000 0.00000 47 'point symmetry operation' ? ? -0.80901699 -0.50000000 -0.30901699 0.00000 -0.50000000 0.30901699 0.80901699 0.00000 -0.30901699 0.80901699 -0.50000000 0.00000 48 'point symmetry operation' ? ? -0.50000000 0.30901699 -0.80901699 0.00000 -0.30901699 0.80901699 0.50000000 0.00000 0.80901699 0.50000000 -0.30901699 0.00000 49 'point symmetry operation' ? ? 0.50000000 0.30901699 -0.80901699 0.00000 0.30901699 0.80901699 0.50000000 0.00000 0.80901699 -0.50000000 0.30901699 0.00000 50 'point symmetry operation' ? ? 0.80901699 -0.50000000 -0.30901699 0.00000 0.50000000 0.30901699 0.80901699 0.00000 -0.30901699 -0.80901699 0.50000000 0.00000 51 'point symmetry operation' ? ? 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 0.00000 -1.00000000 0.00000000 0.00000000 0.00000 52 'point symmetry operation' ? ? 0.80901699 0.50000000 0.30901699 0.00000 0.50000000 -0.30901699 -0.80901699 0.00000 -0.30901699 0.80901699 -0.50000000 0.00000 53 'point symmetry operation' ? ? 0.50000000 -0.30901699 0.80901699 0.00000 0.30901699 -0.80901699 -0.50000000 0.00000 0.80901699 0.50000000 -0.30901699 0.00000 54 'point symmetry operation' ? ? -0.50000000 -0.30901699 0.80901699 0.00000 -0.30901699 -0.80901699 -0.50000000 0.00000 0.80901699 -0.50000000 0.30901699 0.00000 55 'point symmetry operation' ? ? -0.80901699 0.50000000 0.30901699 0.00000 -0.50000000 -0.30901699 -0.80901699 0.00000 -0.30901699 -0.80901699 0.50000000 0.00000 56 'point symmetry operation' ? ? 0.00000000 -1.00000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 0.00000 1.00000000 0.00000000 0.00000000 0.00000 57 'point symmetry operation' ? ? -0.80901699 -0.50000000 -0.30901699 0.00000 0.50000000 -0.30901699 -0.80901699 0.00000 0.30901699 -0.80901699 0.50000000 0.00000 58 'point symmetry operation' ? ? -0.50000000 0.30901699 -0.80901699 0.00000 0.30901699 -0.80901699 -0.50000000 0.00000 -0.80901699 -0.50000000 0.30901699 0.00000 59 'point symmetry operation' ? ? 0.50000000 0.30901699 -0.80901699 0.00000 -0.30901699 -0.80901699 -0.50000000 0.00000 -0.80901699 0.50000000 -0.30901699 0.00000 60 'point symmetry operation' ? ? 0.80901699 -0.50000000 -0.30901699 0.00000 -0.50000000 -0.30901699 -0.80901699 0.00000 0.30901699 0.80901699 -0.50000000 0.00000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 114 ? TRP A 118 ? ALA A 116 TRP A 120 5 ? 5 HELX_P HELX_P2 AA2 ASN A 120 ? ASN A 130 ? ASN A 122 ASN A 132 1 ? 11 HELX_P HELX_P3 AA3 ALA A 402 ? GLU A 406 ? ALA A 404 GLU A 408 5 ? 5 HELX_P HELX_P4 AA4 HIS A 436 ? THR A 440 ? HIS A 438 THR A 442 5 ? 5 HELX_P HELX_P5 AA5 ASN A 549 ? TYR A 553 ? ASN A 551 TYR A 555 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 217 A . ? THR 219 A PRO 218 A ? PRO 220 A 1 1.16 2 TYR 457 A . ? TYR 459 A PRO 458 A ? PRO 460 A 1 -3.77 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 3 ? AA3 ? 3 ? AA4 ? 3 ? AA5 ? 3 ? AA6 ? 5 ? AA7 ? 2 ? AA8 ? 2 ? AA9 ? 2 ? AB1 ? 2 ? AB2 ? 2 ? AB3 ? 2 ? AB4 ? 2 ? AB5 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA6 4 5 ? anti-parallel AA7 1 2 ? anti-parallel AA8 1 2 ? parallel AA9 1 2 ? anti-parallel AB1 1 2 ? parallel AB2 1 2 ? anti-parallel AB3 1 2 ? anti-parallel AB4 1 2 ? anti-parallel AB5 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PRO A 159 ? ASN A 165 ? PRO A 161 ASN A 167 AA1 2 MET A 131 ? ALA A 155 ? MET A 133 ALA A 157 AA1 3 THR A 515 ? MET A 531 ? THR A 517 MET A 533 AA1 4 LEU A 57 ? ASN A 71 ? LEU A 59 ASN A 73 AA1 5 THR A 48 ? TYR A 52 ? THR A 50 TYR A 54 AA2 1 PRO A 159 ? ASN A 165 ? PRO A 161 ASN A 167 AA2 2 MET A 131 ? ALA A 155 ? MET A 133 ALA A 157 AA2 3 GLU A 259 ? SER A 261 ? GLU A 261 SER A 263 AA3 1 GLU A 259 ? SER A 261 ? GLU A 261 SER A 263 AA3 2 MET A 131 ? ALA A 155 ? MET A 133 ALA A 157 AA3 3 TYR A 265 ? TYR A 266 ? TYR A 267 TYR A 268 AA4 1 TYR A 265 ? TYR A 266 ? TYR A 267 TYR A 268 AA4 2 MET A 131 ? ALA A 155 ? MET A 133 ALA A 157 AA4 3 LEU A 272 ? LYS A 273 ? LEU A 274 LYS A 275 AA5 1 ARG A 79 ? VAL A 83 ? ARG A 81 VAL A 85 AA5 2 HIS A 100 ? VAL A 110 ? HIS A 102 VAL A 112 AA5 3 THR A 204 ? TYR A 209 ? THR A 206 TYR A 211 AA6 1 ARG A 79 ? VAL A 83 ? ARG A 81 VAL A 85 AA6 2 HIS A 100 ? VAL A 110 ? HIS A 102 VAL A 112 AA6 3 LEU A 491 ? ILE A 495 ? LEU A 493 ILE A 497 AA6 4 LEU A 171 ? LEU A 175 ? LEU A 173 LEU A 177 AA6 5 HIS A 252 ? LEU A 254 ? HIS A 254 LEU A 256 AA7 1 ARG A 214 ? ASN A 215 ? ARG A 216 ASN A 217 AA7 2 THR A 231 ? ILE A 232 ? THR A 233 ILE A 234 AA8 1 HIS A 276 ? SER A 277 ? HIS A 278 SER A 279 AA8 2 PRO A 572 ? ARG A 573 ? PRO A 574 ARG A 575 AA9 1 LEU A 290 ? THR A 292 ? LEU A 292 THR A 294 AA9 2 THR A 304 ? LEU A 305 ? THR A 306 LEU A 307 AB1 1 GLN A 332 ? VAL A 333 ? GLN A 334 VAL A 335 AB1 2 THR A 448 ? ALA A 449 ? THR A 450 ALA A 451 AB2 1 PHE A 342 ? SER A 345 ? PHE A 344 SER A 347 AB2 2 GLY A 348 ? LEU A 351 ? GLY A 350 LEU A 353 AB3 1 TYR A 371 ? ARG A 372 ? TYR A 373 ARG A 374 AB3 2 THR A 392 ? LEU A 393 ? THR A 394 LEU A 395 AB4 1 ASN A 408 ? GLN A 409 ? ASN A 410 GLN A 411 AB4 2 THR A 422 ? LEU A 423 ? THR A 424 LEU A 425 AB5 1 TRP A 463 ? LYS A 465 ? TRP A 465 LYS A 467 AB5 2 PHE A 481 ? CYS A 483 ? PHE A 483 CYS A 485 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ILE A 162 ? O ILE A 164 N THR A 152 ? N THR A 154 AA1 2 3 N ASN A 135 ? N ASN A 137 O THR A 528 ? O THR A 530 AA1 3 4 O PHE A 527 ? O PHE A 529 N ILE A 60 ? N ILE A 62 AA1 4 5 O THR A 61 ? O THR A 63 N GLU A 49 ? N GLU A 51 AA2 1 2 O ILE A 162 ? O ILE A 164 N THR A 152 ? N THR A 154 AA2 2 3 N ILE A 143 ? N ILE A 145 O PHE A 260 ? O PHE A 262 AA3 1 2 O PHE A 260 ? O PHE A 262 N ILE A 143 ? N ILE A 145 AA3 2 3 N PHE A 139 ? N PHE A 141 O TYR A 265 ? O TYR A 267 AA4 1 2 O TYR A 265 ? O TYR A 267 N PHE A 139 ? N PHE A 141 AA4 2 3 N LEU A 134 ? N LEU A 136 O LEU A 272 ? O LEU A 274 AA5 1 2 N VAL A 83 ? N VAL A 85 O HIS A 100 ? O HIS A 102 AA5 2 3 N TRP A 107 ? N TRP A 109 O TYR A 206 ? O TYR A 208 AA6 1 2 N VAL A 83 ? N VAL A 85 O HIS A 100 ? O HIS A 102 AA6 2 3 N SER A 108 ? N SER A 110 O VAL A 493 ? O VAL A 495 AA6 3 4 O LYS A 494 ? O LYS A 496 N MET A 172 ? N MET A 174 AA6 4 5 N VAL A 173 ? N VAL A 175 O HIS A 252 ? O HIS A 254 AA7 1 2 N ASN A 215 ? N ASN A 217 O THR A 231 ? O THR A 233 AA8 1 2 N HIS A 276 ? N HIS A 278 O ARG A 573 ? O ARG A 575 AA9 1 2 N THR A 292 ? N THR A 294 O THR A 304 ? O THR A 306 AB1 1 2 N GLN A 332 ? N GLN A 334 O ALA A 449 ? O ALA A 451 AB2 1 2 N GLU A 343 ? N GLU A 345 O PHE A 350 ? O PHE A 352 AB3 1 2 N TYR A 371 ? N TYR A 373 O LEU A 393 ? O LEU A 395 AB4 1 2 N ASN A 408 ? N ASN A 410 O LEU A 423 ? O LEU A 425 AB5 1 2 N ASP A 464 ? N ASP A 466 O CYS A 483 ? O CYS A 485 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 48 ? ? -143.88 18.83 2 1 ASP A 57 ? ? 39.82 21.57 3 1 THR A 319 ? ? -118.95 -165.87 4 1 ASP A 348 ? ? -29.64 -31.23 5 1 ASP A 367 ? ? 71.78 -16.72 6 1 GLN A 383 ? ? 61.09 83.32 7 1 ILE A 384 ? ? -38.57 127.33 8 1 ARG A 392 ? ? -120.35 -57.16 9 1 TYR A 393 ? ? 42.95 74.57 10 1 GLN A 416 ? ? 60.34 71.31 11 1 ILE A 464 ? ? -93.31 -65.09 12 1 ASN A 487 ? ? -79.70 -164.54 13 1 GLN A 571 ? ? 60.32 66.22 # _pdbx_point_symmetry.entry_id 6NF9 _pdbx_point_symmetry.Schoenflies_symbol I # _em_3d_fitting.entry_id 6NF9 _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol ? _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 6NF9 _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages 1 _em_3d_reconstruction.num_particles 6342 _em_3d_reconstruction.resolution 3.89 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.euler_angles_details ? # _em_buffer.id 1 _em_buffer.details 'Phosphate buffered saline pH 7.4' _em_buffer.pH 7.4 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name Parvoviridae _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type VIRUS _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 6NF9 _em_image_scans.id 1 _em_image_scans.dimension_height 4096 _em_image_scans.dimension_width 4096 _em_image_scans.frames_per_image ? _em_image_scans.image_recording_id 1 _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.used_frames_per_image ? _em_image_scans.citation_id ? _em_image_scans.number_digital_images ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.details ? # _em_imaging.id 1 _em_imaging.entry_id 6NF9 _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen NITROGEN _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'DARK FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max ? _em_imaging.nominal_defocus_min ? _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details unspecified _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? _em_sample_support.method ? _em_sample_support.film_material ? _em_sample_support.citation_id ? # _em_virus_entity.entity_assembly_id 1 _em_virus_entity.empty YES _em_virus_entity.enveloped NO _em_virus_entity.virus_isolate OTHER _em_virus_entity.virus_type 'VIRUS-LIKE PARTICLE' _em_virus_entity.id 1 _em_virus_entity.virus_host_category ? _em_virus_entity.details ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.entry_id 6NF9 _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 6NF9 _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 6NF9 _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry I # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 3 ? A MET 1 2 1 Y 1 A SER 4 ? A SER 2 3 1 Y 1 A HIS 5 ? A HIS 3 4 1 Y 1 A ASP 6 ? A ASP 4 5 1 Y 1 A ALA 7 ? A ALA 5 6 1 Y 1 A GLN 8 ? A GLN 6 7 1 Y 1 A PRO 9 ? A PRO 7 8 1 Y 1 A ASN 10 ? A ASN 8 9 1 Y 1 A GLU 11 ? A GLU 9 10 1 Y 1 A GLN 12 ? A GLN 10 11 1 Y 1 A PRO 13 ? A PRO 11 12 1 Y 1 A ASN 14 ? A ASN 12 13 1 Y 1 A THR 15 ? A THR 13 14 1 Y 1 A GLY 16 ? A GLY 14 15 1 Y 1 A ILE 17 ? A ILE 15 16 1 Y 1 A GLU 18 ? A GLU 16 17 1 Y 1 A LEU 19 ? A LEU 17 18 1 Y 1 A ALA 20 ? A ALA 18 19 1 Y 1 A THR 21 ? A THR 19 20 1 Y 1 A GLY 22 ? A GLY 20 21 1 Y 1 A GLY 23 ? A GLY 21 22 1 Y 1 A ASN 24 ? A ASN 22 23 1 Y 1 A GLY 25 ? A GLY 23 24 1 Y 1 A SER 26 ? A SER 24 25 1 Y 1 A GLY 27 ? A GLY 25 26 1 Y 1 A SER 28 ? A SER 26 27 1 Y 1 A SER 29 ? A SER 27 28 1 Y 1 A GLY 30 ? A GLY 28 29 1 Y 1 A GLY 31 ? A GLY 29 30 1 Y 1 A GLY 32 ? A GLY 30 31 1 Y 1 A GLY 33 ? A GLY 31 32 1 Y 1 A ARG 34 ? A ARG 32 33 1 Y 1 A GLY 35 ? A GLY 33 34 1 Y 1 A ALA 36 ? A ALA 34 35 1 Y 1 A GLY 37 ? A GLY 35 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # loop_ _em_buffer_component.buffer_id _em_buffer_component.id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.name 1 1 137 mM NaCl 'sodium chloride' 1 2 1.7 mM KCl 'potassium chloride' 1 3 10 mM Na2HPO4 'sodium phosphate dibasic' 1 4 1.8 mM KH2PO4 'potassium phosphate monobasic' # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 10780 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism Parvoviridae _em_entity_assembly_naturalsource.strain 'Mus spretus endogenous viral element' _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.ncbi_tax_id 7111 _em_entity_assembly_recombinant.organism 'Trichoplusia ni' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 45 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'FEI FALCON III (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images 2082 # _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_name ? _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.energyfilter_slit_width ? _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? # _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.details ? _em_particle_selection.method ? _em_particle_selection.num_particles_selected 47 _em_particle_selection.reference_model ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' Autopicking RELION 2.1 1 ? ? 2 'IMAGE ACQUISITION' ? ? ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? Gctf ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? ? ? ? ? ? 8 'MODEL REFINEMENT' ? ? ? ? ? ? 9 OTHER ? ? ? ? ? ? 10 'INITIAL EULER ASSIGNMENT' ? RELION 2.1 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? ? ? 1 ? ? 12 CLASSIFICATION ? ? ? 1 ? ? 13 RECONSTRUCTION ? RELION 2.1 1 ? ? 14 'VOLUME SELECTION' ? ? ? 1 ? 1 15 'SERIES ALIGNMENT' ? ? ? 1 ? 1 16 'MOLECULAR REPLACEMENT' ? ? ? 1 ? 1 17 'LATTICE DISTORTION CORRECTION' ? ? ? 1 ? 1 18 'SYMMETRY DETERMINATION' ? ? ? 1 ? 1 19 'CRYSTALLOGRAPHY MERGING' ? ? ? 1 ? 1 # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _em_virus_natural_host.id 1 _em_virus_natural_host.entity_assembly_id 1 _em_virus_natural_host.ncbi_tax_id 10096 _em_virus_natural_host.organism 'Mus spretus' _em_virus_natural_host.strain ? # _em_virus_shell.id 1 _em_virus_shell.entity_assembly_id 1 _em_virus_shell.diameter 250 _em_virus_shell.name ? _em_virus_shell.triangulation 1 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' 'R01 AI092571' 1 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' GM080533 2 'Medical Research Council (MRC, United Kingdom)' 'United Kingdom' MC_UU_12014/10 3 # _atom_sites.entry_id 6NF9 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_