HEADER TRANSFERASE/IMMUNE SYSTEM 02-APR-19 6OGE TITLE CRYO-EM STRUCTURE OF HER2 EXTRACELLULAR DOMAIN-TRASTUZUMAB FAB- TITLE 2 PERTUZUMAB FAB COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: RECEPTOR TYROSINE-PROTEIN KINASE ERBB-2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: METASTATIC LYMPH NODE GENE 19 PROTEIN,MLN 19,PROTO-ONCOGENE COMPND 5 NEU,PROTO-ONCOGENE C-ERBB-2,TYROSINE KINASE-TYPE CELL SURFACE COMPND 6 RECEPTOR HER2,P185ERBB2; COMPND 7 EC: 2.7.10.1; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: PERTUZUMAB FAB LIGHT CHAIN; COMPND 11 CHAIN: B; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: PERTUZUMAB FAB HEAVY CHAIN; COMPND 15 CHAIN: C; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 4; COMPND 18 MOLECULE: TRASTUZUMAB FAB LIGHT CHAIN; COMPND 19 CHAIN: D; COMPND 20 ENGINEERED: YES; COMPND 21 MOL_ID: 5; COMPND 22 MOLECULE: TRASTUZUMAB FAB HEAVY CHAIN; COMPND 23 CHAIN: E; COMPND 24 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ERBB2, HER2, MLN19, NEU, NGL; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: IGKC; SOURCE 14 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 16 MOL_ID: 3; SOURCE 17 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 18 ORGANISM_COMMON: HUMAN; SOURCE 19 ORGANISM_TAXID: 9606; SOURCE 20 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 22 MOL_ID: 4; SOURCE 23 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 24 ORGANISM_COMMON: HUMAN; SOURCE 25 ORGANISM_TAXID: 9606; SOURCE 26 GENE: IGKC; SOURCE 27 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 29 MOL_ID: 5; SOURCE 30 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 31 ORGANISM_COMMON: HUMAN; SOURCE 32 ORGANISM_TAXID: 9606; SOURCE 33 GENE: IGH@; SOURCE 34 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 35 EXPRESSION_SYSTEM_TAXID: 10029 KEYWDS HER2 EXTRACELLULAR DOMAIN, TRASTUZUMAB, PERTUZUMAB, TRANSFERASE- KEYWDS 2 IMMUNE SYSTEM COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR Y.HAO,X.YU,Y.BAI,X.HUANG REVDAT 3 29-JUL-20 6OGE 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 18-DEC-19 6OGE 1 CRYST1 SCALE REVDAT 1 15-MAY-19 6OGE 0 JRNL AUTH Y.HAO,X.YU,Y.BAI,H.J.MCBRIDE,X.HUANG JRNL TITL CRYO-EM STRUCTURE OF HER2-TRASTUZUMAB-PERTUZUMAB COMPLEX. JRNL REF PLOS ONE V. 14 16095 2019 JRNL REFN ESSN 1932-6203 JRNL PMID 31042744 JRNL DOI 10.1371/JOURNAL.PONE.0216095 REMARK 2 REMARK 2 RESOLUTION. 4.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CISTEM, SERIALEM, CTFFIND, CISTEM, REMARK 3 CISTEM, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 4.360 REMARK 3 NUMBER OF PARTICLES : 398409 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6OGE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-APR-19. REMARK 100 THE DEPOSITION ID IS D_1000240595. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : HER2 EXTRACELLULAR DOMAIN REMARK 245 -TRASTUZUMAB FAB-PERTUZUMAB FAB REMARK 245 COMPLEX; HUMAN HER2 REMARK 245 EXTRACELLULAR DOMAIN; REMARK 245 PERTUZUMAB FAB; TRASTUZUMAB FAB REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 2.40 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : -3500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : -1500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 45.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 130000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 127 REMARK 465 PRO A 128 REMARK 465 VAL A 129 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 567 CB CYS A 567 SG 0.109 REMARK 500 CYS A 584 CB CYS A 584 SG 0.224 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 584 CA - CB - SG ANGL. DEV. = 27.4 DEGREES REMARK 500 LEU D 54 CA - CB - CG ANGL. DEV. = 14.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 31 53.39 -141.53 REMARK 500 LYS A 32 108.25 -55.70 REMARK 500 PRO A 95 58.74 -91.11 REMARK 500 ASP A 110 19.64 54.54 REMARK 500 LEU A 142 40.69 -103.76 REMARK 500 GLN A 160 40.41 -104.49 REMARK 500 ALA A 180 56.80 -96.88 REMARK 500 ARG A 217 -38.39 -133.67 REMARK 500 THR A 276 -8.39 68.31 REMARK 500 PRO A 300 -176.39 -69.24 REMARK 500 ASN A 302 38.51 -98.42 REMARK 500 GLU A 348 -12.24 71.78 REMARK 500 HIS A 349 -16.76 -140.67 REMARK 500 LEU A 455 69.62 -100.45 REMARK 500 PHE A 476 -5.47 73.69 REMARK 500 PRO A 489 45.62 -84.30 REMARK 500 HIS A 490 -35.47 -131.79 REMARK 500 GLN A 548 -33.53 -131.12 REMARK 500 PRO A 565 70.04 -64.57 REMARK 500 GLN A 568 105.43 -58.00 REMARK 500 ASP A 582 30.15 -148.11 REMARK 500 VAL A 585 -54.99 -132.81 REMARK 500 ALA A 586 -157.96 -151.89 REMARK 500 ASP A 607 -22.51 66.65 REMARK 500 PRO A 612 85.92 -68.92 REMARK 500 TRP A 614 57.48 38.60 REMARK 500 PRO A 625 -174.68 -69.08 REMARK 500 THR A 631 -11.46 72.77 REMARK 500 CYS A 634 69.83 60.18 REMARK 500 ASP A 636 -12.55 72.75 REMARK 500 PRO B 8 -159.46 -84.20 REMARK 500 SER B 30 -3.80 -56.17 REMARK 500 ALA B 51 18.09 59.11 REMARK 500 SER B 52 -15.32 -141.04 REMARK 500 ASN B 138 67.11 60.55 REMARK 500 TYR B 140 143.25 -171.64 REMARK 500 PRO B 141 -155.33 -83.01 REMARK 500 ASP B 151 -33.12 69.55 REMARK 500 ASN B 152 -20.04 -153.39 REMARK 500 GLU B 187 49.83 -91.70 REMARK 500 LYS B 188 -36.44 -132.21 REMARK 500 VAL C 48 -65.65 -107.42 REMARK 500 PRO C 52A 42.30 -89.23 REMARK 500 ASN C 53 -38.11 -131.65 REMARK 500 ALA C 84 15.42 56.06 REMARK 500 PRO C 98 42.13 -84.56 REMARK 500 SER C 99 -79.97 -116.08 REMARK 500 PHE C 99A 2.51 -151.27 REMARK 500 ASP C 144 61.24 60.40 REMARK 500 PRO C 147 -158.04 -86.73 REMARK 500 REMARK 500 THIS ENTRY HAS 78 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 HIS A 564 PRO A 565 -138.33 REMARK 500 GLU E 155 PRO E 156 148.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-20055 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF HER2 EXTRACELLULAR DOMAIN-TRASTUZUMAB FAB- REMARK 900 PERTUZUMAB FAB COMPLEX DBREF 6OGE A 23 644 UNP P04626 ERBB2_HUMAN 23 644 DBREF 6OGE B 1 107 PDB 6OGE 6OGE 1 107 DBREF 6OGE B 108 214 UNP P01834 IGKC_HUMAN 1 107 DBREF 6OGE C 1 102 PDB 6OGE 6OGE 1 102 DBREF 6OGE C 103 216 UNP P0DOX5 IGG1_HUMAN 109 222 DBREF 6OGE D 1 107 PDB 6OGE 6OGE 1 107 DBREF 6OGE D 108 214 UNP P01834 IGKC_HUMAN 1 107 DBREF 6OGE E 1 108 PDB 6OGE 6OGE 1 108 DBREF 6OGE E 109 220 UNP Q6GMX6 Q6GMX6_HUMAN 124 235 SEQRES 1 A 622 THR GLN VAL CYS THR GLY THR ASP MET LYS LEU ARG LEU SEQRES 2 A 622 PRO ALA SER PRO GLU THR HIS LEU ASP MET LEU ARG HIS SEQRES 3 A 622 LEU TYR GLN GLY CYS GLN VAL VAL GLN GLY ASN LEU GLU SEQRES 4 A 622 LEU THR TYR LEU PRO THR ASN ALA SER LEU SER PHE LEU SEQRES 5 A 622 GLN ASP ILE GLN GLU VAL GLN GLY TYR VAL LEU ILE ALA SEQRES 6 A 622 HIS ASN GLN VAL ARG GLN VAL PRO LEU GLN ARG LEU ARG SEQRES 7 A 622 ILE VAL ARG GLY THR GLN LEU PHE GLU ASP ASN TYR ALA SEQRES 8 A 622 LEU ALA VAL LEU ASP ASN GLY ASP PRO LEU ASN ASN THR SEQRES 9 A 622 THR PRO VAL THR GLY ALA SER PRO GLY GLY LEU ARG GLU SEQRES 10 A 622 LEU GLN LEU ARG SER LEU THR GLU ILE LEU LYS GLY GLY SEQRES 11 A 622 VAL LEU ILE GLN ARG ASN PRO GLN LEU CYS TYR GLN ASP SEQRES 12 A 622 THR ILE LEU TRP LYS ASP ILE PHE HIS LYS ASN ASN GLN SEQRES 13 A 622 LEU ALA LEU THR LEU ILE ASP THR ASN ARG SER ARG ALA SEQRES 14 A 622 CYS HIS PRO CYS SER PRO MET CYS LYS GLY SER ARG CYS SEQRES 15 A 622 TRP GLY GLU SER SER GLU ASP CYS GLN SER LEU THR ARG SEQRES 16 A 622 THR VAL CYS ALA GLY GLY CYS ALA ARG CYS LYS GLY PRO SEQRES 17 A 622 LEU PRO THR ASP CYS CYS HIS GLU GLN CYS ALA ALA GLY SEQRES 18 A 622 CYS THR GLY PRO LYS HIS SER ASP CYS LEU ALA CYS LEU SEQRES 19 A 622 HIS PHE ASN HIS SER GLY ILE CYS GLU LEU HIS CYS PRO SEQRES 20 A 622 ALA LEU VAL THR TYR ASN THR ASP THR PHE GLU SER MET SEQRES 21 A 622 PRO ASN PRO GLU GLY ARG TYR THR PHE GLY ALA SER CYS SEQRES 22 A 622 VAL THR ALA CYS PRO TYR ASN TYR LEU SER THR ASP VAL SEQRES 23 A 622 GLY SER CYS THR LEU VAL CYS PRO LEU HIS ASN GLN GLU SEQRES 24 A 622 VAL THR ALA GLU ASP GLY THR GLN ARG CYS GLU LYS CYS SEQRES 25 A 622 SER LYS PRO CYS ALA ARG VAL CYS TYR GLY LEU GLY MET SEQRES 26 A 622 GLU HIS LEU ARG GLU VAL ARG ALA VAL THR SER ALA ASN SEQRES 27 A 622 ILE GLN GLU PHE ALA GLY CYS LYS LYS ILE PHE GLY SER SEQRES 28 A 622 LEU ALA PHE LEU PRO GLU SER PHE ASP GLY ASP PRO ALA SEQRES 29 A 622 SER ASN THR ALA PRO LEU GLN PRO GLU GLN LEU GLN VAL SEQRES 30 A 622 PHE GLU THR LEU GLU GLU ILE THR GLY TYR LEU TYR ILE SEQRES 31 A 622 SER ALA TRP PRO ASP SER LEU PRO ASP LEU SER VAL PHE SEQRES 32 A 622 GLN ASN LEU GLN VAL ILE ARG GLY ARG ILE LEU HIS ASN SEQRES 33 A 622 GLY ALA TYR SER LEU THR LEU GLN GLY LEU GLY ILE SER SEQRES 34 A 622 TRP LEU GLY LEU ARG SER LEU ARG GLU LEU GLY SER GLY SEQRES 35 A 622 LEU ALA LEU ILE HIS HIS ASN THR HIS LEU CYS PHE VAL SEQRES 36 A 622 HIS THR VAL PRO TRP ASP GLN LEU PHE ARG ASN PRO HIS SEQRES 37 A 622 GLN ALA LEU LEU HIS THR ALA ASN ARG PRO GLU ASP GLU SEQRES 38 A 622 CYS VAL GLY GLU GLY LEU ALA CYS HIS GLN LEU CYS ALA SEQRES 39 A 622 ARG GLY HIS CYS TRP GLY PRO GLY PRO THR GLN CYS VAL SEQRES 40 A 622 ASN CYS SER GLN PHE LEU ARG GLY GLN GLU CYS VAL GLU SEQRES 41 A 622 GLU CYS ARG VAL LEU GLN GLY LEU PRO ARG GLU TYR VAL SEQRES 42 A 622 ASN ALA ARG HIS CYS LEU PRO CYS HIS PRO GLU CYS GLN SEQRES 43 A 622 PRO GLN ASN GLY SER VAL THR CYS PHE GLY PRO GLU ALA SEQRES 44 A 622 ASP GLN CYS VAL ALA CYS ALA HIS TYR LYS ASP PRO PRO SEQRES 45 A 622 PHE CYS VAL ALA ARG CYS PRO SER GLY VAL LYS PRO ASP SEQRES 46 A 622 LEU SER TYR MET PRO ILE TRP LYS PHE PRO ASP GLU GLU SEQRES 47 A 622 GLY ALA CYS GLN PRO CYS PRO ILE ASN CYS THR HIS SER SEQRES 48 A 622 CYS VAL ASP LEU ASP ASP LYS GLY CYS PRO ALA SEQRES 1 B 214 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 B 214 SER VAL GLY ASP ARG VAL THR ILE THR CYS LYS ALA SER SEQRES 3 B 214 GLN ASP VAL SER ILE GLY VAL ALA TRP TYR GLN GLN LYS SEQRES 4 B 214 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR SER ALA SER SEQRES 5 B 214 TYR ARG TYR THR GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 B 214 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 B 214 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN TYR SEQRES 8 B 214 TYR ILE TYR PRO TYR THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 B 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 B 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 B 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 B 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 B 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 B 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 B 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 B 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 B 214 PHE ASN ARG GLY GLU CYS SEQRES 1 C 222 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 C 222 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 C 222 PHE THR PHE THR ASP TYR THR MET ASP TRP VAL ARG GLN SEQRES 4 C 222 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA ASP VAL ASN SEQRES 5 C 222 PRO ASN SER GLY GLY SER ILE TYR ASN GLN ARG PHE LYS SEQRES 6 C 222 GLY ARG PHE THR LEU SER VAL ASP ARG SER LYS ASN THR SEQRES 7 C 222 LEU TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 C 222 ALA VAL TYR TYR CYS ALA ARG ASN LEU GLY PRO SER PHE SEQRES 9 C 222 TYR PHE ASP TYR TRP GLY GLN GLY THR LEU VAL THR VAL SEQRES 10 C 222 SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU SEQRES 11 C 222 ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA SEQRES 12 C 222 LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL SEQRES 13 C 222 THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL SEQRES 14 C 222 HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SEQRES 15 C 222 SER LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU SEQRES 16 C 222 GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SEQRES 17 C 222 SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER SEQRES 18 C 222 CYS SEQRES 1 D 214 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 D 214 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 D 214 GLN ASP VAL ASN THR ALA VAL ALA TRP TYR GLN GLN LYS SEQRES 4 D 214 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR SER ALA SER SEQRES 5 D 214 PHE LEU TYR SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 D 214 ARG SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 D 214 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN HIS SEQRES 8 D 214 TYR THR THR PRO PRO THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 D 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 D 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 D 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 D 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 D 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 D 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 D 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 D 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 D 214 PHE ASN ARG GLY GLU CYS SEQRES 1 E 220 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 E 220 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 E 220 PHE ASN ILE LYS ASP THR TYR ILE HIS TRP VAL ARG GLN SEQRES 4 E 220 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA ARG ILE TYR SEQRES 5 E 220 PRO THR ASN GLY TYR THR ARG TYR ALA ASP SER VAL LYS SEQRES 6 E 220 GLY ARG PHE THR ILE SER ALA ASP THR SER LYS ASN THR SEQRES 7 E 220 ALA TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 E 220 ALA VAL TYR TYR CYS SER ARG TRP GLY GLY ASP GLY PHE SEQRES 9 E 220 TYR ALA MET ASP TYR TRP GLY GLN GLY THR LEU VAL THR SEQRES 10 E 220 VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO SEQRES 11 E 220 LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA SEQRES 12 E 220 ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO SEQRES 13 E 220 VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY SEQRES 14 E 220 VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU SEQRES 15 E 220 TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SER SEQRES 16 E 220 LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS SEQRES 17 E 220 PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET MAN F 4 11 HET NAG A 701 14 HET NAG A 702 14 HET NAG A 707 14 HET NAG A 708 14 HET NAG A 709 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE FORMUL 6 NAG 7(C8 H15 N O6) FORMUL 6 BMA C6 H12 O6 FORMUL 6 MAN C6 H12 O6 HELIX 1 AA1 THR A 41 TYR A 50 1 10 HELIX 2 AA2 LEU A 71 ILE A 77 5 7 HELIX 3 AA3 LEU A 168 PHE A 173 1 6 HELIX 4 AA4 LEU A 231 CYS A 235 5 5 HELIX 5 AA5 LYS A 248 CYS A 252 5 5 HELIX 6 AA6 ALA A 359 ALA A 365 5 7 HELIX 7 AA7 GLN A 393 GLU A 401 5 9 HELIX 8 AA8 LEU A 422 GLN A 426 5 5 HELIX 9 AA9 LEU A 436 GLY A 439 5 4 HELIX 10 AB1 PRO A 481 PHE A 486 5 6 HELIX 11 AB2 ASP A 502 GLU A 507 1 6 HELIX 12 AB3 GLN B 79 PHE B 83 5 5 HELIX 13 AB4 GLU B 123 GLY B 128 1 6 HELIX 14 AB5 SER B 182 GLU B 187 1 6 HELIX 15 AB6 THR C 28 TYR C 32 5 5 HELIX 16 AB7 SER C 187 THR C 191 5 5 HELIX 17 AB8 SER D 121 LEU D 125 5 5 HELIX 18 AB9 ASN E 28 THR E 32 5 5 HELIX 19 AC1 ASP E 62 LYS E 65 5 4 SHEET 1 AA1 5 VAL A 25 THR A 27 0 SHEET 2 AA1 5 VAL A 55 GLN A 57 1 O GLN A 57 N CYS A 26 SHEET 3 AA1 5 GLU A 79 VAL A 80 1 O GLU A 79 N VAL A 56 SHEET 4 AA1 5 ILE A 101 VAL A 102 1 O ILE A 101 N VAL A 80 SHEET 5 AA1 5 GLU A 147 ILE A 148 1 O GLU A 147 N VAL A 102 SHEET 1 AA2 5 LEU A 60 THR A 63 0 SHEET 2 AA2 5 VAL A 84 ALA A 87 1 O LEU A 85 N LEU A 60 SHEET 3 AA2 5 LEU A 114 LEU A 117 1 O ALA A 115 N ILE A 86 SHEET 4 AA2 5 VAL A 153 GLN A 156 1 O LEU A 154 N LEU A 114 SHEET 5 AA2 5 THR A 182 ILE A 184 1 O LEU A 183 N ILE A 155 SHEET 1 AA3 2 TYR A 289 PHE A 291 0 SHEET 2 AA3 2 SER A 294 VAL A 296 -1 O VAL A 296 N TYR A 289 SHEET 1 AA4 2 ASN A 319 VAL A 322 0 SHEET 2 AA4 2 ARG A 330 LYS A 333 -1 O GLU A 332 N GLN A 320 SHEET 1 AA5 4 LYS A 369 ILE A 370 0 SHEET 2 AA5 4 GLU A 405 ILE A 406 1 O GLU A 405 N ILE A 370 SHEET 3 AA5 4 VAL A 430 ILE A 431 1 O VAL A 430 N ILE A 406 SHEET 4 AA5 4 GLU A 460 LEU A 461 1 O GLU A 460 N ILE A 431 SHEET 1 AA6 5 LEU A 374 PHE A 376 0 SHEET 2 AA6 5 LEU A 410 ILE A 412 1 O TYR A 411 N LEU A 374 SHEET 3 AA6 5 TYR A 441 GLN A 446 1 O THR A 444 N LEU A 410 SHEET 4 AA6 5 LEU A 465 HIS A 469 1 O LEU A 467 N LEU A 445 SHEET 5 AA6 5 LEU A 493 HIS A 495 1 O LEU A 494 N ILE A 468 SHEET 1 AA7 2 GLU A 553 VAL A 555 0 SHEET 2 AA7 2 CYS A 560 PRO A 562 -1 O LEU A 561 N TYR A 554 SHEET 1 AA8 2 TYR A 590 ASP A 592 0 SHEET 2 AA8 2 PHE A 595 VAL A 597 -1 O PHE A 595 N ASP A 592 SHEET 1 AA9 4 MET B 4 SER B 7 0 SHEET 2 AA9 4 VAL B 19 ALA B 25 -1 O LYS B 24 N THR B 5 SHEET 3 AA9 4 THR B 72 ILE B 75 -1 O ILE B 75 N VAL B 19 SHEET 4 AA9 4 GLY B 64 SER B 65 -1 N SER B 65 O THR B 72 SHEET 1 AB1 2 SER B 10 ALA B 13 0 SHEET 2 AB1 2 LYS B 103 ILE B 106 1 O GLU B 105 N LEU B 11 SHEET 1 AB2 4 TYR B 53 ARG B 54 0 SHEET 2 AB2 4 PRO B 44 TYR B 49 -1 N TYR B 49 O TYR B 53 SHEET 3 AB2 4 VAL B 33 GLN B 38 -1 N TRP B 35 O LEU B 47 SHEET 4 AB2 4 THR B 85 GLN B 90 -1 O GLN B 89 N ALA B 34 SHEET 1 AB3 4 PHE B 116 PHE B 118 0 SHEET 2 AB3 4 ALA B 130 PHE B 139 -1 O LEU B 135 N PHE B 116 SHEET 3 AB3 4 TYR B 173 LEU B 181 -1 O SER B 177 N CYS B 134 SHEET 4 AB3 4 SER B 159 GLN B 160 -1 N GLN B 160 O THR B 178 SHEET 1 AB4 3 ALA B 153 GLN B 155 0 SHEET 2 AB4 3 TRP B 148 VAL B 150 -1 N VAL B 150 O ALA B 153 SHEET 3 AB4 3 TYR B 192 CYS B 194 -1 O ALA B 193 N LYS B 149 SHEET 1 AB5 4 GLN C 3 SER C 7 0 SHEET 2 AB5 4 SER C 21 SER C 25 -1 O ALA C 23 N VAL C 5 SHEET 3 AB5 4 THR C 77 LEU C 80 -1 O LEU C 78 N CYS C 22 SHEET 4 AB5 4 LEU C 69 ASP C 72 -1 N SER C 70 O TYR C 79 SHEET 1 AB6 2 LEU C 11 VAL C 12 0 SHEET 2 AB6 2 THR C 110 VAL C 111 1 O THR C 110 N VAL C 12 SHEET 1 AB7 4 LEU C 45 ASP C 50 0 SHEET 2 AB7 4 THR C 33 GLN C 39 -1 N ARG C 38 O GLU C 46 SHEET 3 AB7 4 VAL C 89 ASN C 95 -1 O ALA C 93 N ASP C 35 SHEET 4 AB7 4 THR C 107 LEU C 108 -1 O THR C 107 N TYR C 90 SHEET 1 AB8 4 SER C 120 LEU C 124 0 SHEET 2 AB8 4 LEU C 138 TYR C 145 -1 O LYS C 143 N SER C 120 SHEET 3 AB8 4 TYR C 176 VAL C 182 -1 O LEU C 178 N VAL C 142 SHEET 4 AB8 4 VAL C 163 THR C 165 -1 N HIS C 164 O VAL C 181 SHEET 1 AB9 4 SER C 120 LEU C 124 0 SHEET 2 AB9 4 LEU C 138 TYR C 145 -1 O LYS C 143 N SER C 120 SHEET 3 AB9 4 TYR C 176 VAL C 182 -1 O LEU C 178 N VAL C 142 SHEET 4 AB9 4 VAL C 169 LEU C 170 -1 N VAL C 169 O SER C 177 SHEET 1 AC1 3 THR C 151 TRP C 154 0 SHEET 2 AC1 3 ILE C 195 HIS C 200 -1 O ASN C 197 N SER C 153 SHEET 3 AC1 3 THR C 205 LYS C 210 -1 O LYS C 209 N CYS C 196 SHEET 1 AC2 3 THR D 5 SER D 7 0 SHEET 2 AC2 3 THR D 22 ARG D 24 -1 O ARG D 24 N THR D 5 SHEET 3 AC2 3 ASP D 70 PHE D 71 -1 O PHE D 71 N CYS D 23 SHEET 1 AC3 5 LEU D 11 ALA D 13 0 SHEET 2 AC3 5 THR D 102 ILE D 106 1 O GLU D 105 N LEU D 11 SHEET 3 AC3 5 THR D 85 GLN D 90 -1 N TYR D 86 O THR D 102 SHEET 4 AC3 5 VAL D 33 GLN D 38 -1 N ALA D 34 O GLN D 89 SHEET 5 AC3 5 LYS D 45 LEU D 46 -1 O LYS D 45 N GLN D 37 SHEET 1 AC4 2 ILE D 48 TYR D 49 0 SHEET 2 AC4 2 PHE D 53 LEU D 54 -1 O PHE D 53 N TYR D 49 SHEET 1 AC5 2 PHE D 62 SER D 63 0 SHEET 2 AC5 2 THR D 74 ILE D 75 -1 O THR D 74 N SER D 63 SHEET 1 AC6 3 SER E 17 ALA E 23 0 SHEET 2 AC6 3 THR E 78 ASN E 84 -1 O MET E 83 N LEU E 18 SHEET 3 AC6 3 THR E 69 ASP E 73 -1 N SER E 71 O TYR E 80 SHEET 1 AC7 4 ARG E 59 TYR E 60 0 SHEET 2 AC7 4 LEU E 45 ILE E 51 -1 N ARG E 50 O ARG E 59 SHEET 3 AC7 4 ILE E 34 GLN E 39 -1 N TRP E 36 O VAL E 48 SHEET 4 AC7 4 CYS E 96 ARG E 98 -1 O SER E 97 N HIS E 35 SHEET 1 AC8 2 ALA E 92 VAL E 93 0 SHEET 2 AC8 2 LEU E 115 VAL E 116 -1 O VAL E 116 N ALA E 92 SHEET 1 AC9 2 VAL E 149 TYR E 152 0 SHEET 2 AC9 2 TYR E 183 LEU E 185 -1 O TYR E 183 N TYR E 152 SSBOND 1 CYS A 26 CYS A 53 1555 1555 2.03 SSBOND 2 CYS A 162 CYS A 192 1555 1555 2.03 SSBOND 3 CYS A 195 CYS A 204 1555 1555 2.04 SSBOND 4 CYS A 199 CYS A 212 1555 1555 2.03 SSBOND 5 CYS A 220 CYS A 227 1555 1555 2.02 SSBOND 6 CYS A 224 CYS A 235 1555 1555 2.03 SSBOND 7 CYS A 236 CYS A 244 1555 1555 2.03 SSBOND 8 CYS A 240 CYS A 252 1555 1555 2.02 SSBOND 9 CYS A 255 CYS A 264 1555 1555 2.02 SSBOND 10 CYS A 268 CYS A 295 1555 1555 2.03 SSBOND 11 CYS A 299 CYS A 311 1555 1555 2.03 SSBOND 12 CYS A 315 CYS A 331 1555 1555 2.03 SSBOND 13 CYS A 334 CYS A 338 1555 1555 2.03 SSBOND 14 CYS A 342 CYS A 367 1555 1555 2.03 SSBOND 15 CYS A 475 CYS A 504 1555 1555 2.03 SSBOND 16 CYS A 511 CYS A 520 1555 1555 2.04 SSBOND 17 CYS A 515 CYS A 528 1555 1555 2.03 SSBOND 18 CYS A 531 CYS A 540 1555 1555 2.03 SSBOND 19 CYS A 544 CYS A 560 1555 1555 2.03 SSBOND 20 CYS A 563 CYS A 576 1555 1555 2.05 SSBOND 21 CYS A 567 CYS A 584 1555 1555 2.14 SSBOND 22 CYS A 587 CYS A 596 1555 1555 2.03 SSBOND 23 CYS A 600 CYS A 623 1555 1555 2.04 SSBOND 24 CYS A 626 CYS A 634 1555 1555 2.03 SSBOND 25 CYS A 630 CYS A 642 1555 1555 2.04 SSBOND 26 CYS B 23 CYS B 88 1555 1555 2.04 SSBOND 27 CYS B 134 CYS B 194 1555 1555 2.04 SSBOND 28 CYS B 214 CYS C 216 1555 1555 2.03 SSBOND 29 CYS C 22 CYS C 92 1555 1555 2.03 SSBOND 30 CYS C 140 CYS C 196 1555 1555 2.04 SSBOND 31 CYS D 23 CYS D 88 1555 1555 2.03 SSBOND 32 CYS D 134 CYS D 194 1555 1555 2.04 SSBOND 33 CYS E 22 CYS E 96 1555 1555 2.04 SSBOND 34 CYS E 147 CYS E 203 1555 1555 2.03 LINK ND2 ASN A 68 C1 NAG A 701 1555 1555 1.44 LINK ND2 ASN A 187 C1 NAG A 702 1555 1555 1.44 LINK ND2 ASN A 259 C1 NAG F 1 1555 1555 1.42 LINK ND2 ASN A 530 C1 NAG A 708 1555 1555 1.44 LINK ND2 ASN A 571 C1 NAG A 707 1555 1555 1.44 LINK ND2 ASN A 629 C1 NAG A 709 1555 1555 1.45 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.44 LINK O3 BMA F 3 C1 MAN F 4 1555 1555 1.44 CISPEP 1 PRO A 593 PRO A 594 0 15.25 CISPEP 2 SER B 7 PRO B 8 0 0.89 CISPEP 3 TYR B 94 PRO B 95 0 -14.07 CISPEP 4 TYR B 140 PRO B 141 0 1.74 CISPEP 5 PHE C 146 PRO C 147 0 -6.40 CISPEP 6 GLU C 148 PRO C 149 0 -14.30 CISPEP 7 SER D 7 PRO D 8 0 -6.39 CISPEP 8 THR D 94 PRO D 95 0 1.87 CISPEP 9 TYR D 140 PRO D 141 0 -12.47 CISPEP 10 PHE E 153 PRO E 154 0 -1.82 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000