data_6Q00 # _entry.id 6Q00 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.328 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6Q00 WWPDB D_1000242015 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6Q00 _pdbx_database_status.recvd_initial_deposition_date 2019-08-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Schellenberg, M.J.' 1 0000-0001-7036-5943 'Krahn, J.M.' 2 ? 'Williams, R.S.' 3 0000-0002-4610-8397 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 48 _citation.language ? _citation.page_first 6310 _citation.page_last 6325 _citation.title 'Ubiquitin stimulated reversal of topoisomerase 2 DNA-protein crosslinks by TDP2.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkaa318 _citation.pdbx_database_id_PubMed 32356875 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Schellenberg, M.J.' 1 ? primary 'Appel, C.D.' 2 ? primary 'Riccio, A.A.' 3 ? primary 'Butler, L.R.' 4 ? primary 'Krahn, J.M.' 5 ? primary 'Liebermann, J.A.' 6 ? primary 'Cortes-Ledesma, F.' 7 ? primary 'Williams, R.S.' 8 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6Q00 _cell.details ? _cell.formula_units_Z ? _cell.length_a 48.742 _cell.length_a_esd ? _cell.length_b 48.742 _cell.length_b_esd ? _cell.length_c 50.421 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Q00 _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Ubiquitin 8576.831 1 ? ? ? ? 2 polymer man 'Tyrosyl-DNA phosphodiesterase 2' 5043.624 1 3.1.4.- ? ? ? 3 non-polymer syn 'POTASSIUM ION' 39.098 2 ? ? ? ? 4 water nat water 18.015 233 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name ;hTDP2,5'-tyrosyl-DNA phosphodiesterase,5'-Tyr-DNA phosphodiesterase,ETS1-associated protein 2,ETS1-associated protein II,EAPII,TRAF and TNF receptor-associated protein,Tyrosyl-RNA phosphodiesterase,VPg unlinkase ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG A ? 2 'polypeptide(L)' no yes 'SNARRLL(CSO)VEFASVASCDAAVAQCFLAENDWEMERALNSYFEPPV' SNARRLLCVEFASVASCDAAVAQCFLAENDWEMERALNSYFEPPV B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLN n 1 3 ILE n 1 4 PHE n 1 5 VAL n 1 6 LYS n 1 7 THR n 1 8 LEU n 1 9 THR n 1 10 GLY n 1 11 LYS n 1 12 THR n 1 13 ILE n 1 14 THR n 1 15 LEU n 1 16 GLU n 1 17 VAL n 1 18 GLU n 1 19 PRO n 1 20 SER n 1 21 ASP n 1 22 THR n 1 23 ILE n 1 24 GLU n 1 25 ASN n 1 26 VAL n 1 27 LYS n 1 28 ALA n 1 29 LYS n 1 30 ILE n 1 31 GLN n 1 32 ASP n 1 33 LYS n 1 34 GLU n 1 35 GLY n 1 36 ILE n 1 37 PRO n 1 38 PRO n 1 39 ASP n 1 40 GLN n 1 41 GLN n 1 42 ARG n 1 43 LEU n 1 44 ILE n 1 45 PHE n 1 46 ALA n 1 47 GLY n 1 48 LYS n 1 49 GLN n 1 50 LEU n 1 51 GLU n 1 52 ASP n 1 53 GLY n 1 54 ARG n 1 55 THR n 1 56 LEU n 1 57 SER n 1 58 ASP n 1 59 TYR n 1 60 ASN n 1 61 ILE n 1 62 GLN n 1 63 LYS n 1 64 GLU n 1 65 SER n 1 66 THR n 1 67 LEU n 1 68 HIS n 1 69 LEU n 1 70 VAL n 1 71 LEU n 1 72 ARG n 1 73 LEU n 1 74 ARG n 1 75 GLY n 1 76 GLY n 2 1 SER n 2 2 ASN n 2 3 ALA n 2 4 ARG n 2 5 ARG n 2 6 LEU n 2 7 LEU n 2 8 CSO n 2 9 VAL n 2 10 GLU n 2 11 PHE n 2 12 ALA n 2 13 SER n 2 14 VAL n 2 15 ALA n 2 16 SER n 2 17 CYS n 2 18 ASP n 2 19 ALA n 2 20 ALA n 2 21 VAL n 2 22 ALA n 2 23 GLN n 2 24 CYS n 2 25 PHE n 2 26 LEU n 2 27 ALA n 2 28 GLU n 2 29 ASN n 2 30 ASP n 2 31 TRP n 2 32 GLU n 2 33 MET n 2 34 GLU n 2 35 ARG n 2 36 ALA n 2 37 LEU n 2 38 ASN n 2 39 SER n 2 40 TYR n 2 41 PHE n 2 42 GLU n 2 43 PRO n 2 44 PRO n 2 45 VAL n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 76 Human ? UBC ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? pet15 ? ? 2 1 sample 'Biological sequence' 1 45 Human ? 'TDP2, EAP2, TTRAP, AD-022' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? plasmid ? ? ? pMCSG9 ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP UBC_HUMAN P0CG48 ? 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 1 2 UNP TYDP2_HUMAN O95551 ? 2 RRLLCVEFASVASCDAAVAQCFLAENDWEMERALNSYFEPPV 25 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6Q00 A 1 ? 76 ? P0CG48 1 ? 76 ? 1 76 2 2 6Q00 B 4 ? 45 ? O95551 25 ? 66 ? 25 66 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 2 6Q00 SER B 1 ? UNP O95551 ? ? 'expression tag' 22 1 2 6Q00 ASN B 2 ? UNP O95551 ? ? 'expression tag' 23 2 2 6Q00 ALA B 3 ? UNP O95551 ? ? 'expression tag' 24 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CSO 'L-peptide linking' n S-HYDROXYCYSTEINE ? 'C3 H7 N O3 S' 137.158 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6Q00 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.20 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 44.06 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 278 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '10 mM Tris, 200 mM Potassium Formate, 14% (w/v) PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX300-HS' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-04-25 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8266 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.8266 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 10.640 _reflns.entry_id 6Q00 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 0.850 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 202939 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.600 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 16.100 _reflns.pdbx_Rmerge_I_obs 0.048 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 15.300 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.022 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.049 _reflns.pdbx_Rpim_I_all 0.009 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 0.850 0.860 ? ? ? ? ? ? 5067 97.800 ? ? ? ? ? ? ? ? ? ? ? ? ? 8.600 ? 0.998 ? ? ? 0.443 ? 1 1 0.574 ? 0.860 0.880 ? ? ? ? ? ? 5029 98.300 ? ? ? ? ? ? ? ? ? ? ? ? ? 11.300 ? 1.021 ? ? ? 0.347 ? 2 1 0.728 ? 0.880 0.900 ? ? ? ? ? ? 5119 99.200 ? ? ? ? 0.933 ? ? ? ? ? ? ? ? 13.800 ? 1.019 ? ? 0.968 0.258 ? 3 1 0.842 ? 0.900 0.920 ? ? ? ? ? ? 5125 99.200 ? ? ? ? 0.742 ? ? ? ? ? ? ? ? 14.500 ? 0.999 ? ? 0.769 0.200 ? 4 1 0.906 ? 0.920 0.940 ? ? ? ? ? ? 5109 99.600 ? ? ? ? 0.555 ? ? ? ? ? ? ? ? 14.500 ? 1.018 ? ? 0.575 0.149 ? 5 1 0.944 ? 0.940 0.960 ? ? ? ? ? ? 5142 99.700 ? ? ? ? 0.434 ? ? ? ? ? ? ? ? 14.600 ? 1.036 ? ? 0.449 0.116 ? 6 1 0.965 ? 0.960 0.980 ? ? ? ? ? ? 5136 99.700 ? ? ? ? 0.321 ? ? ? ? ? ? ? ? 14.700 ? 1.029 ? ? 0.332 0.086 ? 7 1 0.981 ? 0.980 1.010 ? ? ? ? ? ? 5133 99.700 ? ? ? ? 0.248 ? ? ? ? ? ? ? ? 14.700 ? 1.029 ? ? 0.257 0.067 ? 8 1 0.988 ? 1.010 1.040 ? ? ? ? ? ? 5150 99.900 ? ? ? ? 0.191 ? ? ? ? ? ? ? ? 14.800 ? 1.026 ? ? 0.197 0.051 ? 9 1 0.992 ? 1.040 1.070 ? ? ? ? ? ? 5134 99.900 ? ? ? ? 0.144 ? ? ? ? ? ? ? ? 14.800 ? 1.024 ? ? 0.149 0.039 ? 10 1 0.996 ? 1.070 1.110 ? ? ? ? ? ? 5195 99.900 ? ? ? ? 0.114 ? ? ? ? ? ? ? ? 15.000 ? 1.032 ? ? 0.119 0.031 ? 11 1 0.997 ? 1.110 1.150 ? ? ? ? ? ? 5120 100.000 ? ? ? ? 0.089 ? ? ? ? ? ? ? ? 15.000 ? 1.026 ? ? 0.093 0.024 ? 12 1 0.998 ? 1.150 1.210 ? ? ? ? ? ? 5161 100.000 ? ? ? ? 0.072 ? ? ? ? ? ? ? ? 15.100 ? 0.992 ? ? 0.075 0.019 ? 13 1 0.999 ? 1.210 1.270 ? ? ? ? ? ? 5167 100.000 ? ? ? ? 0.065 ? ? ? ? ? ? ? ? 15.200 ? 1.015 ? ? 0.067 0.017 ? 14 1 0.999 ? 1.270 1.350 ? ? ? ? ? ? 5182 100.000 ? ? ? ? 0.061 ? ? ? ? ? ? ? ? 15.300 ? 1.031 ? ? 0.063 0.016 ? 15 1 0.999 ? 1.350 1.450 ? ? ? ? ? ? 5141 100.000 ? ? ? ? 0.053 ? ? ? ? ? ? ? ? 15.400 ? 1.024 ? ? 0.054 0.014 ? 16 1 0.999 ? 1.450 1.600 ? ? ? ? ? ? 5199 100.000 ? ? ? ? 0.043 ? ? ? ? ? ? ? ? 15.500 ? 1.018 ? ? 0.044 0.011 ? 17 1 0.999 ? 1.600 1.830 ? ? ? ? ? ? 5177 100.000 ? ? ? ? 0.037 ? ? ? ? ? ? ? ? 15.500 ? 1.015 ? ? 0.039 0.010 ? 18 1 1.000 ? 1.830 2.310 ? ? ? ? ? ? 5225 99.900 ? ? ? ? 0.064 ? ? ? ? ? ? ? ? 29.000 ? 1.028 ? ? 0.065 0.011 ? 19 1 0.999 ? 2.310 50.000 ? ? ? ? ? ? 5282 100.000 ? ? ? ? 0.042 ? ? ? ? ? ? ? ? 34.300 ? 1.030 ? ? 0.043 0.008 ? 20 1 1.000 ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 49.830 _refine.B_iso_mean 14.6000 _refine.B_iso_min 6.610 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6Q00 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 0.8500 _refine.ls_d_res_low 28.4530 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 202929 _refine.ls_number_reflns_R_free 10141 _refine.ls_number_reflns_R_work 192788 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.3800 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.0958 _refine.ls_R_factor_R_free 0.1118 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.0949 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 10.2400 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.0700 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set 0.9456 _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 0.8500 _refine_hist.d_res_low 28.4530 _refine_hist.number_atoms_solvent 310 _refine_hist.number_atoms_total 1266 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 121 _refine_hist.pdbx_B_iso_mean_ligand 14.65 _refine_hist.pdbx_B_iso_mean_solvent 22.33 _refine_hist.pdbx_number_atoms_protein 954 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.015 ? 1278 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.469 ? 1750 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.090 ? 190 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.009 ? 248 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 16.060 ? 513 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 0.8502 0.8598 . . 291 6172 95.0000 . . . 0.3140 0.0000 0.2961 . . . . . . . . . . 'X-RAY DIFFRACTION' 0.8598 0.8700 . . 367 6341 98.0000 . . . 0.2663 0.0000 0.2670 . . . . . . . . . . 'X-RAY DIFFRACTION' 0.8700 0.8806 . . 367 6260 98.0000 . . . 0.2599 0.0000 0.2420 . . . . . . . . . . 'X-RAY DIFFRACTION' 0.8806 0.8917 . . 384 6376 99.0000 . . . 0.2431 0.0000 0.2225 . . . . . . . . . . 'X-RAY DIFFRACTION' 0.8917 0.9034 . . 329 6420 99.0000 . . . 0.2219 0.0000 0.1967 . . . . . . . . . . 'X-RAY DIFFRACTION' 0.9034 0.9158 . . 344 6386 99.0000 . . . 0.1751 0.0000 0.1756 . . . . . . . . . . 'X-RAY DIFFRACTION' 0.9158 0.9289 . . 350 6363 99.0000 . . . 0.1715 0.0000 0.1558 . . . . . . . . . . 'X-RAY DIFFRACTION' 0.9289 0.9428 . . 343 6421 99.0000 . . . 0.1501 0.0000 0.1464 . . . . . . . . . . 'X-RAY DIFFRACTION' 0.9428 0.9575 . . 292 6483 99.0000 . . . 0.1461 0.0000 0.1299 . . . . . . . . . . 'X-RAY DIFFRACTION' 0.9575 0.9732 . . 352 6395 99.0000 . . . 0.1250 0.0000 0.1159 . . . . . . . . . . 'X-RAY DIFFRACTION' 0.9732 0.9900 . . 353 6405 99.0000 . . . 0.1078 0.0000 0.1048 . . . . . . . . . . 'X-RAY DIFFRACTION' 0.9900 1.0080 . . 307 6426 100.0000 . . . 0.0956 0.0000 0.0965 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.0080 1.0274 . . 339 6513 100.0000 . . . 0.1033 0.0000 0.0893 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.0274 1.0483 . . 346 6393 100.0000 . . . 0.0920 0.0000 0.0805 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.0483 1.0711 . . 328 6460 100.0000 . . . 0.0942 0.0000 0.0728 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.0711 1.0961 . . 362 6465 100.0000 . . . 0.0821 0.0000 0.0699 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.0961 1.1235 . . 330 6436 100.0000 . . . 0.0870 0.0000 0.0655 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.1235 1.1538 . . 367 6428 100.0000 . . . 0.0765 0.0000 0.0618 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.1538 1.1878 . . 309 6535 100.0000 . . . 0.0775 0.0000 0.0599 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.1878 1.2261 . . 306 6482 100.0000 . . . 0.0698 0.0000 0.0600 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.2261 1.2700 . . 329 6435 100.0000 . . . 0.0736 0.0000 0.0601 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.2700 1.3208 . . 351 6462 100.0000 . . . 0.0841 0.0000 0.0675 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.3208 1.3809 . . 366 6451 100.0000 . . . 0.0854 0.0000 0.0698 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.3809 1.4537 . . 327 6420 100.0000 . . . 0.0940 0.0000 0.0709 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.4537 1.5448 . . 327 6498 100.0000 . . . 0.0870 0.0000 0.0706 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5448 1.6641 . . 332 6496 100.0000 . . . 0.0898 0.0000 0.0781 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6641 1.8315 . . 334 6457 100.0000 . . . 0.0950 0.0000 0.0881 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8315 2.0964 . . 308 6511 100.0000 . . . 0.1087 0.0000 0.0887 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0964 2.6410 . . 345 6433 100.0000 . . . 0.1028 0.0000 0.0964 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6410 28.453 . . 356 6465 100.0000 . . . 0.1382 0.0000 0.1151 . . . . . . . . . . # _struct.entry_id 6Q00 _struct.title 'TDP2 UBA Domain Bound to Ubiquitin at 0.85 Angstroms Resolution, Crystal Form 1' _struct.pdbx_descriptor 'DNA ligase 1/DNA Complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6Q00 _struct_keywords.text ;TDP2, DNA Damage Response, Cell Signaling, post-translational modification, Topoisomerase 2, SIGNALING PROTEIN, SIGNALING PROTEIN-HYDROLASE complex ; _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN/HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 22 ? GLY A 35 ? THR A 22 GLY A 35 1 ? 14 HELX_P HELX_P2 AA2 PRO A 37 ? ASP A 39 ? PRO A 37 ASP A 39 5 ? 3 HELX_P HELX_P3 AA3 LEU A 56 ? ASN A 60 ? LEU A 56 ASN A 60 5 ? 5 HELX_P HELX_P4 AA4 ASN B 2 ? SER B 16 ? ASN B 23 SER B 37 1 ? 15 HELX_P HELX_P5 AA5 ASP B 18 ? ASN B 29 ? ASP B 39 ASN B 50 1 ? 12 HELX_P HELX_P6 AA6 GLU B 32 ? GLU B 42 ? GLU B 53 GLU B 63 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A GLY 47 O ? ? ? 1_555 C K . K ? ? A GLY 47 B K 101 1_555 ? ? ? ? ? ? ? 2.877 ? covale1 covale both ? B LEU 7 C ? ? ? 1_555 B CSO 8 N A ? B LEU 28 B CSO 29 1_555 ? ? ? ? ? ? ? 1.337 ? covale2 covale both ? B LEU 7 C ? ? ? 1_555 B CSO 8 N B ? B LEU 28 B CSO 29 1_555 ? ? ? ? ? ? ? 1.329 ? covale3 covale both ? B CSO 8 C A ? ? 1_555 B VAL 9 N ? ? B CSO 29 B VAL 30 1_555 ? ? ? ? ? ? ? 1.343 ? covale4 covale both ? B CSO 8 C B ? ? 1_555 B VAL 9 N ? ? B CSO 29 B VAL 30 1_555 ? ? ? ? ? ? ? 1.327 ? metalc2 metalc ? ? B ALA 15 O ? ? ? 1_555 C K . K ? ? B ALA 36 B K 101 1_555 ? ? ? ? ? ? ? 2.536 ? metalc3 metalc ? ? B SER 39 O ? ? ? 1_555 D K . K A ? B SER 60 B K 102 1_555 ? ? ? ? ? ? ? 2.897 ? metalc4 metalc ? ? B TYR 40 O ? ? ? 1_555 D K . K A ? B TYR 61 B K 102 1_555 ? ? ? ? ? ? ? 2.769 ? metalc5 metalc ? ? B TYR 40 OH ? ? ? 1_555 C K . K ? ? B TYR 61 B K 101 1_555 ? ? ? ? ? ? ? 2.784 ? metalc6 metalc ? ? B GLU 42 O ? ? ? 1_555 D K . K A ? B GLU 63 B K 102 1_555 ? ? ? ? ? ? ? 2.862 ? metalc7 metalc ? ? C K . K ? ? ? 1_555 F HOH . O ? ? B K 101 B HOH 258 1_555 ? ? ? ? ? ? ? 2.696 ? metalc8 metalc ? ? C K . K ? ? ? 1_555 E HOH . O ? ? B K 101 A HOH 105 1_555 ? ? ? ? ? ? ? 2.760 ? metalc9 metalc ? ? C K . K ? ? ? 1_555 F HOH . O ? ? B K 101 B HOH 210 1_555 ? ? ? ? ? ? ? 2.684 ? metalc10 metalc ? ? D K . K A ? ? 1_555 F HOH . O A ? B K 102 B HOH 248 1_555 ? ? ? ? ? ? ? 3.063 ? metalc11 metalc ? ? D K . K A ? ? 1_555 F HOH . O A ? B K 102 B HOH 243 1_555 ? ? ? ? ? ? ? 3.293 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 12 ? GLU A 16 ? THR A 12 GLU A 16 AA1 2 GLN A 2 ? THR A 7 ? GLN A 2 THR A 7 AA1 3 THR A 66 ? LEU A 71 ? THR A 66 LEU A 71 AA1 4 GLN A 41 ? PHE A 45 ? GLN A 41 PHE A 45 AA1 5 LYS A 48 ? GLN A 49 ? LYS A 48 GLN A 49 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ILE A 13 ? O ILE A 13 N VAL A 5 ? N VAL A 5 AA1 2 3 N LYS A 6 ? N LYS A 6 O LEU A 67 ? O LEU A 67 AA1 3 4 O VAL A 70 ? O VAL A 70 N ARG A 42 ? N ARG A 42 AA1 4 5 N PHE A 45 ? N PHE A 45 O LYS A 48 ? O LYS A 48 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B K 101 ? 7 'binding site for residue K B 101' AC2 Software B K 102 ? 6 'binding site for residue K B 102' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 GLY A 47 ? GLY A 47 . ? 1_555 ? 2 AC1 7 HOH E . ? HOH A 105 . ? 1_555 ? 3 AC1 7 ALA B 15 ? ALA B 36 . ? 1_555 ? 4 AC1 7 SER B 16 ? SER B 37 . ? 1_555 ? 5 AC1 7 TYR B 40 ? TYR B 61 . ? 1_555 ? 6 AC1 7 HOH F . ? HOH B 210 . ? 1_555 ? 7 AC1 7 HOH F . ? HOH B 258 . ? 1_555 ? 8 AC2 6 SER B 39 ? SER B 60 . ? 1_555 ? 9 AC2 6 TYR B 40 ? TYR B 61 . ? 1_555 ? 10 AC2 6 GLU B 42 ? GLU B 63 . ? 1_555 ? 11 AC2 6 HOH F . ? HOH B 201 . ? 1_555 ? 12 AC2 6 HOH F . ? HOH B 243 . ? 1_555 ? 13 AC2 6 HOH F . ? HOH B 248 . ? 1_555 ? # _atom_sites.entry_id 6Q00 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.020516 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020516 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019833 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H K N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 HIS 68 68 68 HIS HIS A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 GLY 76 76 76 GLY GLY A . n B 2 1 SER 1 22 22 SER SER B . n B 2 2 ASN 2 23 23 ASN ASN B . n B 2 3 ALA 3 24 24 ALA ALA B . n B 2 4 ARG 4 25 25 ARG ARG B . n B 2 5 ARG 5 26 26 ARG ARG B . n B 2 6 LEU 6 27 27 LEU LEU B . n B 2 7 LEU 7 28 28 LEU LEU B . n B 2 8 CSO 8 29 29 CSO CSO B . n B 2 9 VAL 9 30 30 VAL VAL B . n B 2 10 GLU 10 31 31 GLU GLU B . n B 2 11 PHE 11 32 32 PHE PHE B . n B 2 12 ALA 12 33 33 ALA ALA B . n B 2 13 SER 13 34 34 SER SER B . n B 2 14 VAL 14 35 35 VAL VAL B . n B 2 15 ALA 15 36 36 ALA ALA B . n B 2 16 SER 16 37 37 SER SER B . n B 2 17 CYS 17 38 38 CYS CYS B . n B 2 18 ASP 18 39 39 ASP ASP B . n B 2 19 ALA 19 40 40 ALA ALA B . n B 2 20 ALA 20 41 41 ALA ALA B . n B 2 21 VAL 21 42 42 VAL VAL B . n B 2 22 ALA 22 43 43 ALA ALA B . n B 2 23 GLN 23 44 44 GLN GLN B . n B 2 24 CYS 24 45 45 CYS CYS B . n B 2 25 PHE 25 46 46 PHE PHE B . n B 2 26 LEU 26 47 47 LEU LEU B . n B 2 27 ALA 27 48 48 ALA ALA B . n B 2 28 GLU 28 49 49 GLU GLU B . n B 2 29 ASN 29 50 50 ASN ASN B . n B 2 30 ASP 30 51 51 ASP ASP B . n B 2 31 TRP 31 52 52 TRP TRP B . n B 2 32 GLU 32 53 53 GLU GLU B . n B 2 33 MET 33 54 54 MET MET B . n B 2 34 GLU 34 55 55 GLU GLU B . n B 2 35 ARG 35 56 56 ARG ARG B . n B 2 36 ALA 36 57 57 ALA ALA B . n B 2 37 LEU 37 58 58 LEU LEU B . n B 2 38 ASN 38 59 59 ASN ASN B . n B 2 39 SER 39 60 60 SER SER B . n B 2 40 TYR 40 61 61 TYR TYR B . n B 2 41 PHE 41 62 62 PHE PHE B . n B 2 42 GLU 42 63 63 GLU GLU B . n B 2 43 PRO 43 64 64 PRO PRO B . n B 2 44 PRO 44 65 65 PRO PRO B . n B 2 45 VAL 45 66 66 VAL VAL B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 K 1 101 67 K K B . D 3 K 1 102 1 K K B . E 4 HOH 1 101 43 HOH HOH A . E 4 HOH 2 102 64 HOH HOH A . E 4 HOH 3 103 25 HOH HOH A . E 4 HOH 4 104 99 HOH HOH A . E 4 HOH 5 105 90 HOH HOH A . E 4 HOH 6 106 66 HOH HOH A . E 4 HOH 7 107 59 HOH HOH A . E 4 HOH 8 108 109 HOH HOH A . E 4 HOH 9 109 178 HOH HOH A . E 4 HOH 10 110 108 HOH HOH A . E 4 HOH 11 111 126 HOH HOH A . E 4 HOH 12 112 143 HOH HOH A . E 4 HOH 13 113 65 HOH HOH A . E 4 HOH 14 114 101 HOH HOH A . E 4 HOH 15 115 111 HOH HOH A . E 4 HOH 16 116 57 HOH HOH A . E 4 HOH 17 117 115 HOH HOH A . E 4 HOH 18 118 133 HOH HOH A . E 4 HOH 19 119 116 HOH HOH A . E 4 HOH 20 120 33 HOH HOH A . E 4 HOH 21 121 135 HOH HOH A . E 4 HOH 22 122 104 HOH HOH A . E 4 HOH 23 123 163 HOH HOH A . E 4 HOH 24 124 136 HOH HOH A . E 4 HOH 25 125 84 HOH HOH A . E 4 HOH 26 126 88 HOH HOH A . E 4 HOH 27 127 174 HOH HOH A . E 4 HOH 28 128 24 HOH HOH A . E 4 HOH 29 129 171 HOH HOH A . E 4 HOH 30 130 150 HOH HOH A . E 4 HOH 31 131 151 HOH HOH A . E 4 HOH 32 132 155 HOH HOH A . E 4 HOH 33 133 96 HOH HOH A . E 4 HOH 34 134 48 HOH HOH A . E 4 HOH 35 135 105 HOH HOH A . E 4 HOH 36 136 9 HOH HOH A . E 4 HOH 37 137 77 HOH HOH A . E 4 HOH 38 138 46 HOH HOH A . E 4 HOH 39 139 20 HOH HOH A . E 4 HOH 40 140 154 HOH HOH A . E 4 HOH 41 141 182 HOH HOH A . E 4 HOH 42 142 177 HOH HOH A . E 4 HOH 43 143 152 HOH HOH A . E 4 HOH 44 144 110 HOH HOH A . E 4 HOH 45 145 13 HOH HOH A . E 4 HOH 46 146 141 HOH HOH A . E 4 HOH 47 147 78 HOH HOH A . E 4 HOH 48 148 83 HOH HOH A . E 4 HOH 49 149 145 HOH HOH A . E 4 HOH 50 150 158 HOH HOH A . E 4 HOH 51 151 166 HOH HOH A . E 4 HOH 52 152 95 HOH HOH A . E 4 HOH 53 153 80 HOH HOH A . E 4 HOH 54 154 127 HOH HOH A . E 4 HOH 55 155 11 HOH HOH A . E 4 HOH 56 156 76 HOH HOH A . E 4 HOH 57 157 45 HOH HOH A . E 4 HOH 58 158 98 HOH HOH A . E 4 HOH 59 159 91 HOH HOH A . E 4 HOH 60 160 113 HOH HOH A . E 4 HOH 61 161 157 HOH HOH A . E 4 HOH 62 162 86 HOH HOH A . E 4 HOH 63 163 146 HOH HOH A . E 4 HOH 64 164 161 HOH HOH A . E 4 HOH 65 165 168 HOH HOH A . E 4 HOH 66 166 159 HOH HOH A . E 4 HOH 67 167 125 HOH HOH A . E 4 HOH 68 168 148 HOH HOH A . E 4 HOH 69 169 128 HOH HOH A . E 4 HOH 70 170 74 HOH HOH A . E 4 HOH 71 171 131 HOH HOH A . E 4 HOH 72 172 139 HOH HOH A . E 4 HOH 73 173 106 HOH HOH A . E 4 HOH 74 174 122 HOH HOH A . E 4 HOH 75 175 130 HOH HOH A . E 4 HOH 76 176 89 HOH HOH A . E 4 HOH 77 177 103 HOH HOH A . E 4 HOH 78 178 102 HOH HOH A . E 4 HOH 79 179 8 HOH HOH A . E 4 HOH 80 180 85 HOH HOH A . E 4 HOH 81 181 12 HOH HOH A . E 4 HOH 82 182 19 HOH HOH A . E 4 HOH 83 183 39 HOH HOH A . E 4 HOH 84 184 120 HOH HOH A . E 4 HOH 85 185 118 HOH HOH A . E 4 HOH 86 186 93 HOH HOH A . E 4 HOH 87 187 31 HOH HOH A . E 4 HOH 88 188 44 HOH HOH A . E 4 HOH 89 189 41 HOH HOH A . E 4 HOH 90 190 160 HOH HOH A . E 4 HOH 91 191 81 HOH HOH A . E 4 HOH 92 192 26 HOH HOH A . E 4 HOH 93 193 18 HOH HOH A . E 4 HOH 94 194 69 HOH HOH A . E 4 HOH 95 195 156 HOH HOH A . E 4 HOH 96 196 119 HOH HOH A . E 4 HOH 97 197 144 HOH HOH A . E 4 HOH 98 198 62 HOH HOH A . E 4 HOH 99 199 2 HOH HOH A . E 4 HOH 100 200 82 HOH HOH A . E 4 HOH 101 201 112 HOH HOH A . E 4 HOH 102 202 70 HOH HOH A . E 4 HOH 103 203 67 HOH HOH A . E 4 HOH 104 204 107 HOH HOH A . E 4 HOH 105 205 118 HOH HOH A . E 4 HOH 106 206 102 HOH HOH A . E 4 HOH 107 207 14 HOH HOH A . E 4 HOH 108 208 91 HOH HOH A . E 4 HOH 109 209 49 HOH HOH A . E 4 HOH 110 210 165 HOH HOH A . E 4 HOH 111 211 34 HOH HOH A . E 4 HOH 112 212 149 HOH HOH A . E 4 HOH 113 213 38 HOH HOH A . E 4 HOH 114 214 105 HOH HOH A . E 4 HOH 115 215 3 HOH HOH A . E 4 HOH 116 216 117 HOH HOH A . E 4 HOH 117 217 72 HOH HOH A . E 4 HOH 118 218 94 HOH HOH A . E 4 HOH 119 219 147 HOH HOH A . E 4 HOH 120 220 6 HOH HOH A . E 4 HOH 121 221 63 HOH HOH A . E 4 HOH 122 222 153 HOH HOH A . E 4 HOH 123 223 79 HOH HOH A . E 4 HOH 124 224 77 HOH HOH A . E 4 HOH 125 225 21 HOH HOH A . E 4 HOH 126 226 42 HOH HOH A . E 4 HOH 127 227 53 HOH HOH A . E 4 HOH 128 228 73 HOH HOH A . E 4 HOH 129 229 40 HOH HOH A . E 4 HOH 130 230 181 HOH HOH A . E 4 HOH 131 231 97 HOH HOH A . E 4 HOH 132 232 35 HOH HOH A . E 4 HOH 133 233 61 HOH HOH A . E 4 HOH 134 234 84 HOH HOH A . E 4 HOH 135 235 142 HOH HOH A . E 4 HOH 136 236 132 HOH HOH A . E 4 HOH 137 237 56 HOH HOH A . E 4 HOH 138 238 162 HOH HOH A . E 4 HOH 139 239 27 HOH HOH A . E 4 HOH 140 240 30 HOH HOH A . E 4 HOH 141 241 132 HOH HOH A . E 4 HOH 142 242 90 HOH HOH A . E 4 HOH 143 243 47 HOH HOH A . E 4 HOH 144 244 108 HOH HOH A . E 4 HOH 145 245 164 HOH HOH A . E 4 HOH 146 246 58 HOH HOH A . E 4 HOH 147 247 179 HOH HOH A . E 4 HOH 148 248 75 HOH HOH A . E 4 HOH 149 249 32 HOH HOH A . E 4 HOH 150 250 36 HOH HOH A . E 4 HOH 151 251 170 HOH HOH A . E 4 HOH 152 252 78 HOH HOH A . E 4 HOH 153 253 134 HOH HOH A . E 4 HOH 154 254 60 HOH HOH A . F 4 HOH 1 201 87 HOH HOH B . F 4 HOH 2 202 51 HOH HOH B . F 4 HOH 3 203 107 HOH HOH B . F 4 HOH 4 204 50 HOH HOH B . F 4 HOH 5 205 103 HOH HOH B . F 4 HOH 6 206 22 HOH HOH B . F 4 HOH 7 207 55 HOH HOH B . F 4 HOH 8 208 117 HOH HOH B . F 4 HOH 9 209 122 HOH HOH B . F 4 HOH 10 210 109 HOH HOH B . F 4 HOH 11 211 16 HOH HOH B . F 4 HOH 12 212 130 HOH HOH B . F 4 HOH 13 213 96 HOH HOH B . F 4 HOH 14 214 113 HOH HOH B . F 4 HOH 15 215 79 HOH HOH B . F 4 HOH 16 216 74 HOH HOH B . F 4 HOH 17 217 70 HOH HOH B . F 4 HOH 18 218 73 HOH HOH B . F 4 HOH 19 219 116 HOH HOH B . F 4 HOH 20 220 71 HOH HOH B . F 4 HOH 21 221 76 HOH HOH B . F 4 HOH 22 222 97 HOH HOH B . F 4 HOH 23 223 72 HOH HOH B . F 4 HOH 24 224 124 HOH HOH B . F 4 HOH 25 225 93 HOH HOH B . F 4 HOH 26 226 115 HOH HOH B . F 4 HOH 27 227 134 HOH HOH B . F 4 HOH 28 228 88 HOH HOH B . F 4 HOH 29 229 104 HOH HOH B . F 4 HOH 30 230 114 HOH HOH B . F 4 HOH 31 231 69 HOH HOH B . F 4 HOH 32 232 101 HOH HOH B . F 4 HOH 33 233 92 HOH HOH B . F 4 HOH 34 234 77 HOH HOH B . F 4 HOH 35 235 100 HOH HOH B . F 4 HOH 36 236 86 HOH HOH B . F 4 HOH 37 237 68 HOH HOH B . F 4 HOH 38 238 4 HOH HOH B . F 4 HOH 39 239 15 HOH HOH B . F 4 HOH 40 240 100 HOH HOH B . F 4 HOH 41 241 119 HOH HOH B . F 4 HOH 42 242 106 HOH HOH B . F 4 HOH 43 243 52 HOH HOH B . F 4 HOH 44 244 94 HOH HOH B . F 4 HOH 45 245 110 HOH HOH B . F 4 HOH 46 246 175 HOH HOH B . F 4 HOH 47 247 92 HOH HOH B . F 4 HOH 48 248 23 HOH HOH B . F 4 HOH 49 249 137 HOH HOH B . F 4 HOH 50 250 5 HOH HOH B . F 4 HOH 51 251 75 HOH HOH B . F 4 HOH 52 252 98 HOH HOH B . F 4 HOH 53 253 71 HOH HOH B . F 4 HOH 54 254 121 HOH HOH B . F 4 HOH 55 255 112 HOH HOH B . F 4 HOH 56 256 87 HOH HOH B . F 4 HOH 57 257 54 HOH HOH B . F 4 HOH 58 258 129 HOH HOH B . F 4 HOH 59 259 29 HOH HOH B . F 4 HOH 60 260 125 HOH HOH B . F 4 HOH 61 261 85 HOH HOH B . F 4 HOH 62 262 183 HOH HOH B . F 4 HOH 63 263 78 HOH HOH B . F 4 HOH 64 264 120 HOH HOH B . F 4 HOH 65 265 7 HOH HOH B . F 4 HOH 66 266 123 HOH HOH B . F 4 HOH 67 267 123 HOH HOH B . F 4 HOH 68 268 68 HOH HOH B . F 4 HOH 69 269 10 HOH HOH B . F 4 HOH 70 270 128 HOH HOH B . F 4 HOH 71 271 17 HOH HOH B . F 4 HOH 72 272 82 HOH HOH B . F 4 HOH 73 273 83 HOH HOH B . F 4 HOH 74 274 169 HOH HOH B . F 4 HOH 75 275 95 HOH HOH B . F 4 HOH 76 276 89 HOH HOH B . F 4 HOH 77 277 37 HOH HOH B . F 4 HOH 78 278 80 HOH HOH B . F 4 HOH 79 279 133 HOH HOH B . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id CSO _pdbx_struct_mod_residue.label_seq_id 8 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id CSO _pdbx_struct_mod_residue.auth_seq_id 29 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id CYS _pdbx_struct_mod_residue.details 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1490 ? 1 MORE -4 ? 1 'SSA (A^2)' 6970 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A GLY 47 ? A GLY 47 ? 1_555 K ? C K . ? B K 101 ? 1_555 O ? B ALA 15 ? B ALA 36 ? 1_555 81.6 ? 2 O ? A GLY 47 ? A GLY 47 ? 1_555 K ? C K . ? B K 101 ? 1_555 OH ? B TYR 40 ? B TYR 61 ? 1_555 116.7 ? 3 O ? B ALA 15 ? B ALA 36 ? 1_555 K ? C K . ? B K 101 ? 1_555 OH ? B TYR 40 ? B TYR 61 ? 1_555 81.4 ? 4 O ? A GLY 47 ? A GLY 47 ? 1_555 K ? C K . ? B K 101 ? 1_555 O ? F HOH . ? B HOH 258 ? 1_555 89.7 ? 5 O ? B ALA 15 ? B ALA 36 ? 1_555 K ? C K . ? B K 101 ? 1_555 O ? F HOH . ? B HOH 258 ? 1_555 155.0 ? 6 OH ? B TYR 40 ? B TYR 61 ? 1_555 K ? C K . ? B K 101 ? 1_555 O ? F HOH . ? B HOH 258 ? 1_555 81.7 ? 7 O ? A GLY 47 ? A GLY 47 ? 1_555 K ? C K . ? B K 101 ? 1_555 O ? E HOH . ? A HOH 105 ? 1_555 76.7 ? 8 O ? B ALA 15 ? B ALA 36 ? 1_555 K ? C K . ? B K 101 ? 1_555 O ? E HOH . ? A HOH 105 ? 1_555 101.6 ? 9 OH ? B TYR 40 ? B TYR 61 ? 1_555 K ? C K . ? B K 101 ? 1_555 O ? E HOH . ? A HOH 105 ? 1_555 166.7 ? 10 O ? F HOH . ? B HOH 258 ? 1_555 K ? C K . ? B K 101 ? 1_555 O ? E HOH . ? A HOH 105 ? 1_555 99.1 ? 11 O ? A GLY 47 ? A GLY 47 ? 1_555 K ? C K . ? B K 101 ? 1_555 O ? F HOH . ? B HOH 210 ? 1_555 163.1 ? 12 O ? B ALA 15 ? B ALA 36 ? 1_555 K ? C K . ? B K 101 ? 1_555 O ? F HOH . ? B HOH 210 ? 1_555 99.8 ? 13 OH ? B TYR 40 ? B TYR 61 ? 1_555 K ? C K . ? B K 101 ? 1_555 O ? F HOH . ? B HOH 210 ? 1_555 80.0 ? 14 O ? F HOH . ? B HOH 258 ? 1_555 K ? C K . ? B K 101 ? 1_555 O ? F HOH . ? B HOH 210 ? 1_555 95.2 ? 15 O ? E HOH . ? A HOH 105 ? 1_555 K ? C K . ? B K 101 ? 1_555 O ? F HOH . ? B HOH 210 ? 1_555 86.6 ? 16 O ? B SER 39 ? B SER 60 ? 1_555 K A D K . ? B K 102 ? 1_555 O ? B TYR 40 ? B TYR 61 ? 1_555 72.9 ? 17 O ? B SER 39 ? B SER 60 ? 1_555 K A D K . ? B K 102 ? 1_555 O ? B GLU 42 ? B GLU 63 ? 1_555 84.9 ? 18 O ? B TYR 40 ? B TYR 61 ? 1_555 K A D K . ? B K 102 ? 1_555 O ? B GLU 42 ? B GLU 63 ? 1_555 99.7 ? 19 O ? B SER 39 ? B SER 60 ? 1_555 K A D K . ? B K 102 ? 1_555 O A F HOH . ? B HOH 248 ? 1_555 106.6 ? 20 O ? B TYR 40 ? B TYR 61 ? 1_555 K A D K . ? B K 102 ? 1_555 O A F HOH . ? B HOH 248 ? 1_555 65.1 ? 21 O ? B GLU 42 ? B GLU 63 ? 1_555 K A D K . ? B K 102 ? 1_555 O A F HOH . ? B HOH 248 ? 1_555 155.9 ? 22 O ? B SER 39 ? B SER 60 ? 1_555 K A D K . ? B K 102 ? 1_555 O A F HOH . ? B HOH 243 ? 1_555 57.2 ? 23 O ? B TYR 40 ? B TYR 61 ? 1_555 K A D K . ? B K 102 ? 1_555 O A F HOH . ? B HOH 243 ? 1_555 118.5 ? 24 O ? B GLU 42 ? B GLU 63 ? 1_555 K A D K . ? B K 102 ? 1_555 O A F HOH . ? B HOH 243 ? 1_555 108.6 ? 25 O A F HOH . ? B HOH 248 ? 1_555 K A D K . ? B K 102 ? 1_555 O A F HOH . ? B HOH 243 ? 1_555 95.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-04-29 2 'Structure model' 1 1 2020-05-13 3 'Structure model' 1 2 2020-06-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 3 'Structure model' '_citation.journal_volume' 11 3 'Structure model' '_citation.page_first' 12 3 'Structure model' '_citation.page_last' # _phasing.method SAD # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.8.4_1496 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? SOLVE ? ? ? . 4 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 5 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 6 # _pdbx_entry_details.entry_id 6Q00 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A GLY 76 ? A 1_555 H3 B SER 22 ? ? 2_575 1.49 2 1 HE2 B GLU 49 ? ? 1_555 OE1 B GLU 55 ? ? 4_464 1.54 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O C A HOH 253 ? 6.01 . 2 1 O ? A HOH 254 ? 6.55 . # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 1Z01ES102765 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'POTASSIUM ION' K 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #