data_6TOL # _entry.id 6TOL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6TOL pdb_00006tol 10.2210/pdb6tol/pdb WWPDB D_1292104975 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-04-22 2 'Structure model' 1 1 2020-05-06 3 'Structure model' 1 2 2024-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation_author.identifier_ORCID' 5 3 'Structure model' '_database_2.pdbx_DOI' 6 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6TOL _pdbx_database_status.recvd_initial_deposition_date 2019-12-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Rodrigues, M.J.' 1 0000-0003-1243-903X 'Le Bihan, Y.-V.' 2 0000-0002-6850-9706 'van Montfort, R.L.M.' 3 0000-0002-5688-3450 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Med.Chem. _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 0022-2623 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 63 _citation.language ? _citation.page_first 4047 _citation.page_last 4068 _citation.title 'AchievingIn VivoTarget Depletion through the Discovery and Optimization of Benzimidazolone BCL6 Degraders.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.9b02076 _citation.pdbx_database_id_PubMed 32275432 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bellenie, B.R.' 1 ? primary 'Cheung, K.J.' 2 ? primary 'Varela, A.' 3 ? primary 'Pierrat, O.A.' 4 ? primary 'Collie, G.W.' 5 ? primary 'Box, G.M.' 6 ? primary 'Bright, M.D.' 7 ? primary 'Gowan, S.' 8 ? primary 'Hayes, A.' 9 ? primary 'Rodrigues, M.J.' 10 ? primary 'Shetty, K.N.' 11 ? primary 'Carter, M.' 12 ? primary 'Davis, O.A.' 13 ? primary 'Henley, A.T.' 14 ? primary 'Innocenti, P.' 15 ? primary 'Johnson, L.D.' 16 ? primary 'Liu, M.' 17 ? primary 'de Klerk, S.' 18 ? primary 'Le Bihan, Y.V.' 19 ? primary 'Lloyd, M.G.' 20 ? primary 'McAndrew, P.C.' 21 ? primary 'Shehu, E.' 22 ? primary 'Talbot, R.' 23 ? primary 'Woodward, H.L.' 24 ? primary 'Burke, R.' 25 ? primary 'Kirkin, V.' 26 ? primary 'van Montfort, R.L.M.' 27 ? primary 'Raynaud, F.I.' 28 ? primary 'Rossanese, O.W.' 29 ? primary 'Hoelder, S.' 30 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'B-cell lymphoma 6 protein' 16498.953 1 ? ? ? ? 2 non-polymer syn ;5-[[5-chloranyl-2-[(2~{S},6~{R})-2,6-dimethylmorpholin-4-yl]pyrimidin-4-yl]amino]-1-methyl-3-(3-methyl-3-oxidanyl-butyl)benzimidazol-2-one ; 474.984 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 8 ? ? ? ? 4 non-polymer syn 'DIMETHYL SULFOXIDE' 78.133 1 ? ? ? ? 5 water nat water 18.015 161 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'BCL-6,B-cell lymphoma 5 protein,BCL-5,Protein LAZ-3,Zinc finger and BTB domain-containing protein 27,Zinc finger protein 51' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPGLDYKDDDDKENLYFQGADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQL KCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE ; _entity_poly.pdbx_seq_one_letter_code_can ;GPGLDYKDDDDKENLYFQGADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQL KCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;5-[[5-chloranyl-2-[(2~{S},6~{R})-2,6-dimethylmorpholin-4-yl]pyrimidin-4-yl]amino]-1-methyl-3-(3-methyl-3-oxidanyl-butyl)benzimidazol-2-one ; NQW 3 1,2-ETHANEDIOL EDO 4 'DIMETHYL SULFOXIDE' DMS 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 GLY n 1 4 LEU n 1 5 ASP n 1 6 TYR n 1 7 LYS n 1 8 ASP n 1 9 ASP n 1 10 ASP n 1 11 ASP n 1 12 LYS n 1 13 GLU n 1 14 ASN n 1 15 LEU n 1 16 TYR n 1 17 PHE n 1 18 GLN n 1 19 GLY n 1 20 ALA n 1 21 ASP n 1 22 SER n 1 23 CYS n 1 24 ILE n 1 25 GLN n 1 26 PHE n 1 27 THR n 1 28 ARG n 1 29 HIS n 1 30 ALA n 1 31 SER n 1 32 ASP n 1 33 VAL n 1 34 LEU n 1 35 LEU n 1 36 ASN n 1 37 LEU n 1 38 ASN n 1 39 ARG n 1 40 LEU n 1 41 ARG n 1 42 SER n 1 43 ARG n 1 44 ASP n 1 45 ILE n 1 46 LEU n 1 47 THR n 1 48 ASP n 1 49 VAL n 1 50 VAL n 1 51 ILE n 1 52 VAL n 1 53 VAL n 1 54 SER n 1 55 ARG n 1 56 GLU n 1 57 GLN n 1 58 PHE n 1 59 ARG n 1 60 ALA n 1 61 HIS n 1 62 LYS n 1 63 THR n 1 64 VAL n 1 65 LEU n 1 66 MET n 1 67 ALA n 1 68 CYS n 1 69 SER n 1 70 GLY n 1 71 LEU n 1 72 PHE n 1 73 TYR n 1 74 SER n 1 75 ILE n 1 76 PHE n 1 77 THR n 1 78 ASP n 1 79 GLN n 1 80 LEU n 1 81 LYS n 1 82 CYS n 1 83 ASN n 1 84 LEU n 1 85 SER n 1 86 VAL n 1 87 ILE n 1 88 ASN n 1 89 LEU n 1 90 ASP n 1 91 PRO n 1 92 GLU n 1 93 ILE n 1 94 ASN n 1 95 PRO n 1 96 GLU n 1 97 GLY n 1 98 PHE n 1 99 CYS n 1 100 ILE n 1 101 LEU n 1 102 LEU n 1 103 ASP n 1 104 PHE n 1 105 MET n 1 106 TYR n 1 107 THR n 1 108 SER n 1 109 ARG n 1 110 LEU n 1 111 ASN n 1 112 LEU n 1 113 ARG n 1 114 GLU n 1 115 GLY n 1 116 ASN n 1 117 ILE n 1 118 MET n 1 119 ALA n 1 120 VAL n 1 121 MET n 1 122 ALA n 1 123 THR n 1 124 ALA n 1 125 MET n 1 126 TYR n 1 127 LEU n 1 128 GLN n 1 129 MET n 1 130 GLU n 1 131 HIS n 1 132 VAL n 1 133 VAL n 1 134 ASP n 1 135 THR n 1 136 CYS n 1 137 ARG n 1 138 LYS n 1 139 PHE n 1 140 ILE n 1 141 LYS n 1 142 ALA n 1 143 SER n 1 144 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 144 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BCL6, BCL5, LAZ3, ZBTB27, ZNF51' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant AI _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET48b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DMS non-polymer . 'DIMETHYL SULFOXIDE' ? 'C2 H6 O S' 78.133 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NQW non-polymer . ;5-[[5-chloranyl-2-[(2~{S},6~{R})-2,6-dimethylmorpholin-4-yl]pyrimidin-4-yl]amino]-1-methyl-3-(3-methyl-3-oxidanyl-butyl)benzimidazol-2-one ; ? 'C23 H31 Cl N6 O3' 474.984 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -14 ? ? ? A . n A 1 2 PRO 2 -13 ? ? ? A . n A 1 3 GLY 3 -12 ? ? ? A . n A 1 4 LEU 4 -11 ? ? ? A . n A 1 5 ASP 5 -10 ? ? ? A . n A 1 6 TYR 6 -9 ? ? ? A . n A 1 7 LYS 7 -8 ? ? ? A . n A 1 8 ASP 8 -7 ? ? ? A . n A 1 9 ASP 9 -6 ? ? ? A . n A 1 10 ASP 10 -5 ? ? ? A . n A 1 11 ASP 11 -4 ? ? ? A . n A 1 12 LYS 12 -3 ? ? ? A . n A 1 13 GLU 13 -2 ? ? ? A . n A 1 14 ASN 14 -1 -1 ASN ASN A . n A 1 15 LEU 15 0 0 LEU LEU A . n A 1 16 TYR 16 1 1 TYR TYR A . n A 1 17 PHE 17 2 2 PHE PHE A . n A 1 18 GLN 18 3 3 GLN GLN A . n A 1 19 GLY 19 4 4 GLY GLY A . n A 1 20 ALA 20 5 5 ALA ALA A . n A 1 21 ASP 21 6 6 ASP ASP A . n A 1 22 SER 22 7 7 SER SER A . n A 1 23 CYS 23 8 8 CYS CYS A . n A 1 24 ILE 24 9 9 ILE ILE A . n A 1 25 GLN 25 10 10 GLN GLN A . n A 1 26 PHE 26 11 11 PHE PHE A . n A 1 27 THR 27 12 12 THR THR A . n A 1 28 ARG 28 13 13 ARG ARG A . n A 1 29 HIS 29 14 14 HIS HIS A . n A 1 30 ALA 30 15 15 ALA ALA A . n A 1 31 SER 31 16 16 SER SER A . n A 1 32 ASP 32 17 17 ASP ASP A . n A 1 33 VAL 33 18 18 VAL VAL A . n A 1 34 LEU 34 19 19 LEU LEU A . n A 1 35 LEU 35 20 20 LEU LEU A . n A 1 36 ASN 36 21 21 ASN ASN A . n A 1 37 LEU 37 22 22 LEU LEU A . n A 1 38 ASN 38 23 23 ASN ASN A . n A 1 39 ARG 39 24 24 ARG ARG A . n A 1 40 LEU 40 25 25 LEU LEU A . n A 1 41 ARG 41 26 26 ARG ARG A . n A 1 42 SER 42 27 27 SER SER A . n A 1 43 ARG 43 28 28 ARG ARG A . n A 1 44 ASP 44 29 29 ASP ASP A . n A 1 45 ILE 45 30 30 ILE ILE A . n A 1 46 LEU 46 31 31 LEU LEU A . n A 1 47 THR 47 32 32 THR THR A . n A 1 48 ASP 48 33 33 ASP ASP A . n A 1 49 VAL 49 34 34 VAL VAL A . n A 1 50 VAL 50 35 35 VAL VAL A . n A 1 51 ILE 51 36 36 ILE ILE A . n A 1 52 VAL 52 37 37 VAL VAL A . n A 1 53 VAL 53 38 38 VAL VAL A . n A 1 54 SER 54 39 39 SER SER A . n A 1 55 ARG 55 40 40 ARG ARG A . n A 1 56 GLU 56 41 41 GLU GLU A . n A 1 57 GLN 57 42 42 GLN GLN A . n A 1 58 PHE 58 43 43 PHE PHE A . n A 1 59 ARG 59 44 44 ARG ARG A . n A 1 60 ALA 60 45 45 ALA ALA A . n A 1 61 HIS 61 46 46 HIS HIS A . n A 1 62 LYS 62 47 47 LYS LYS A . n A 1 63 THR 63 48 48 THR THR A . n A 1 64 VAL 64 49 49 VAL VAL A . n A 1 65 LEU 65 50 50 LEU LEU A . n A 1 66 MET 66 51 51 MET MET A . n A 1 67 ALA 67 52 52 ALA ALA A . n A 1 68 CYS 68 53 53 CYS CYS A . n A 1 69 SER 69 54 54 SER SER A . n A 1 70 GLY 70 55 55 GLY GLY A . n A 1 71 LEU 71 56 56 LEU LEU A . n A 1 72 PHE 72 57 57 PHE PHE A . n A 1 73 TYR 73 58 58 TYR TYR A . n A 1 74 SER 74 59 59 SER SER A . n A 1 75 ILE 75 60 60 ILE ILE A . n A 1 76 PHE 76 61 61 PHE PHE A . n A 1 77 THR 77 62 62 THR THR A . n A 1 78 ASP 78 63 63 ASP ASP A . n A 1 79 GLN 79 64 64 GLN GLN A . n A 1 80 LEU 80 65 65 LEU LEU A . n A 1 81 LYS 81 66 66 LYS LYS A . n A 1 82 CYS 82 67 67 CYS CYS A . n A 1 83 ASN 83 68 68 ASN ASN A . n A 1 84 LEU 84 69 69 LEU LEU A . n A 1 85 SER 85 70 70 SER SER A . n A 1 86 VAL 86 71 71 VAL VAL A . n A 1 87 ILE 87 72 72 ILE ILE A . n A 1 88 ASN 88 73 73 ASN ASN A . n A 1 89 LEU 89 74 74 LEU LEU A . n A 1 90 ASP 90 75 75 ASP ASP A . n A 1 91 PRO 91 76 76 PRO PRO A . n A 1 92 GLU 92 77 77 GLU GLU A . n A 1 93 ILE 93 78 78 ILE ILE A . n A 1 94 ASN 94 79 79 ASN ASN A . n A 1 95 PRO 95 80 80 PRO PRO A . n A 1 96 GLU 96 81 81 GLU GLU A . n A 1 97 GLY 97 82 82 GLY GLY A . n A 1 98 PHE 98 83 83 PHE PHE A . n A 1 99 CYS 99 84 84 CYS CYS A . n A 1 100 ILE 100 85 85 ILE ILE A . n A 1 101 LEU 101 86 86 LEU LEU A . n A 1 102 LEU 102 87 87 LEU LEU A . n A 1 103 ASP 103 88 88 ASP ASP A . n A 1 104 PHE 104 89 89 PHE PHE A . n A 1 105 MET 105 90 90 MET MET A . n A 1 106 TYR 106 91 91 TYR TYR A . n A 1 107 THR 107 92 92 THR THR A . n A 1 108 SER 108 93 93 SER SER A . n A 1 109 ARG 109 94 94 ARG ARG A . n A 1 110 LEU 110 95 95 LEU LEU A . n A 1 111 ASN 111 96 96 ASN ASN A . n A 1 112 LEU 112 97 97 LEU LEU A . n A 1 113 ARG 113 98 98 ARG ARG A . n A 1 114 GLU 114 99 99 GLU GLU A . n A 1 115 GLY 115 100 100 GLY GLY A . n A 1 116 ASN 116 101 101 ASN ASN A . n A 1 117 ILE 117 102 102 ILE ILE A . n A 1 118 MET 118 103 103 MET MET A . n A 1 119 ALA 119 104 104 ALA ALA A . n A 1 120 VAL 120 105 105 VAL VAL A . n A 1 121 MET 121 106 106 MET MET A . n A 1 122 ALA 122 107 107 ALA ALA A . n A 1 123 THR 123 108 108 THR THR A . n A 1 124 ALA 124 109 109 ALA ALA A . n A 1 125 MET 125 110 110 MET MET A . n A 1 126 TYR 126 111 111 TYR TYR A . n A 1 127 LEU 127 112 112 LEU LEU A . n A 1 128 GLN 128 113 113 GLN GLN A . n A 1 129 MET 129 114 114 MET MET A . n A 1 130 GLU 130 115 115 GLU GLU A . n A 1 131 HIS 131 116 116 HIS HIS A . n A 1 132 VAL 132 117 117 VAL VAL A . n A 1 133 VAL 133 118 118 VAL VAL A . n A 1 134 ASP 134 119 119 ASP ASP A . n A 1 135 THR 135 120 120 THR THR A . n A 1 136 CYS 136 121 121 CYS CYS A . n A 1 137 ARG 137 122 122 ARG ARG A . n A 1 138 LYS 138 123 123 LYS LYS A . n A 1 139 PHE 139 124 124 PHE PHE A . n A 1 140 ILE 140 125 125 ILE ILE A . n A 1 141 LYS 141 126 126 LYS LYS A . n A 1 142 ALA 142 127 127 ALA ALA A . n A 1 143 SER 143 128 128 SER SER A . n A 1 144 GLU 144 129 129 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NQW 1 201 200 NQW 259 A . C 3 EDO 1 202 1 EDO EDO A . D 3 EDO 1 203 2 EDO EDO A . E 3 EDO 1 204 3 EDO EDO A . F 3 EDO 1 205 4 EDO EDO A . G 3 EDO 1 206 5 EDO EDO A . H 3 EDO 1 207 6 EDO EDO A . I 3 EDO 1 208 7 EDO EDO A . J 3 EDO 1 209 8 EDO EDO A . K 4 DMS 1 210 1 DMS DMS A . L 5 HOH 1 301 143 HOH HOH A . L 5 HOH 2 302 139 HOH HOH A . L 5 HOH 3 303 44 HOH HOH A . L 5 HOH 4 304 61 HOH HOH A . L 5 HOH 5 305 78 HOH HOH A . L 5 HOH 6 306 7 HOH HOH A . L 5 HOH 7 307 148 HOH HOH A . L 5 HOH 8 308 17 HOH HOH A . L 5 HOH 9 309 150 HOH HOH A . L 5 HOH 10 310 25 HOH HOH A . L 5 HOH 11 311 10 HOH HOH A . L 5 HOH 12 312 43 HOH HOH A . L 5 HOH 13 313 153 HOH HOH A . L 5 HOH 14 314 151 HOH HOH A . L 5 HOH 15 315 34 HOH HOH A . L 5 HOH 16 316 62 HOH HOH A . L 5 HOH 17 317 37 HOH HOH A . L 5 HOH 18 318 33 HOH HOH A . L 5 HOH 19 319 156 HOH HOH A . L 5 HOH 20 320 142 HOH HOH A . L 5 HOH 21 321 147 HOH HOH A . L 5 HOH 22 322 73 HOH HOH A . L 5 HOH 23 323 163 HOH HOH A . L 5 HOH 24 324 63 HOH HOH A . L 5 HOH 25 325 38 HOH HOH A . L 5 HOH 26 326 140 HOH HOH A . L 5 HOH 27 327 171 HOH HOH A . L 5 HOH 28 328 15 HOH HOH A . L 5 HOH 29 329 167 HOH HOH A . L 5 HOH 30 330 14 HOH HOH A . L 5 HOH 31 331 69 HOH HOH A . L 5 HOH 32 332 116 HOH HOH A . L 5 HOH 33 333 45 HOH HOH A . L 5 HOH 34 334 128 HOH HOH A . L 5 HOH 35 335 80 HOH HOH A . L 5 HOH 36 336 178 HOH HOH A . L 5 HOH 37 337 137 HOH HOH A . L 5 HOH 38 338 127 HOH HOH A . L 5 HOH 39 339 20 HOH HOH A . L 5 HOH 40 340 184 HOH HOH A . L 5 HOH 41 341 1 HOH HOH A . L 5 HOH 42 342 27 HOH HOH A . L 5 HOH 43 343 54 HOH HOH A . L 5 HOH 44 344 113 HOH HOH A . L 5 HOH 45 345 19 HOH HOH A . L 5 HOH 46 346 186 HOH HOH A . L 5 HOH 47 347 21 HOH HOH A . L 5 HOH 48 348 52 HOH HOH A . L 5 HOH 49 349 12 HOH HOH A . L 5 HOH 50 350 145 HOH HOH A . L 5 HOH 51 351 11 HOH HOH A . L 5 HOH 52 352 49 HOH HOH A . L 5 HOH 53 353 57 HOH HOH A . L 5 HOH 54 354 32 HOH HOH A . L 5 HOH 55 355 81 HOH HOH A . L 5 HOH 56 356 9 HOH HOH A . L 5 HOH 57 357 157 HOH HOH A . L 5 HOH 58 358 77 HOH HOH A . L 5 HOH 59 359 18 HOH HOH A . L 5 HOH 60 360 6 HOH HOH A . L 5 HOH 61 361 165 HOH HOH A . L 5 HOH 62 362 120 HOH HOH A . L 5 HOH 63 363 35 HOH HOH A . L 5 HOH 64 364 84 HOH HOH A . L 5 HOH 65 365 71 HOH HOH A . L 5 HOH 66 366 91 HOH HOH A . L 5 HOH 67 367 115 HOH HOH A . L 5 HOH 68 368 64 HOH HOH A . L 5 HOH 69 369 4 HOH HOH A . L 5 HOH 70 370 188 HOH HOH A . L 5 HOH 71 371 114 HOH HOH A . L 5 HOH 72 372 39 HOH HOH A . L 5 HOH 73 373 47 HOH HOH A . L 5 HOH 74 374 158 HOH HOH A . L 5 HOH 75 375 22 HOH HOH A . L 5 HOH 76 376 173 HOH HOH A . L 5 HOH 77 377 26 HOH HOH A . L 5 HOH 78 378 169 HOH HOH A . L 5 HOH 79 379 29 HOH HOH A . L 5 HOH 80 380 41 HOH HOH A . L 5 HOH 81 381 138 HOH HOH A . L 5 HOH 82 382 75 HOH HOH A . L 5 HOH 83 383 70 HOH HOH A . L 5 HOH 84 384 24 HOH HOH A . L 5 HOH 85 385 3 HOH HOH A . L 5 HOH 86 386 40 HOH HOH A . L 5 HOH 87 387 48 HOH HOH A . L 5 HOH 88 388 97 HOH HOH A . L 5 HOH 89 389 51 HOH HOH A . L 5 HOH 90 390 162 HOH HOH A . L 5 HOH 91 391 83 HOH HOH A . L 5 HOH 92 392 16 HOH HOH A . L 5 HOH 93 393 111 HOH HOH A . L 5 HOH 94 394 65 HOH HOH A . L 5 HOH 95 395 59 HOH HOH A . L 5 HOH 96 396 23 HOH HOH A . L 5 HOH 97 397 141 HOH HOH A . L 5 HOH 98 398 99 HOH HOH A . L 5 HOH 99 399 126 HOH HOH A . L 5 HOH 100 400 66 HOH HOH A . L 5 HOH 101 401 42 HOH HOH A . L 5 HOH 102 402 86 HOH HOH A . L 5 HOH 103 403 134 HOH HOH A . L 5 HOH 104 404 13 HOH HOH A . L 5 HOH 105 405 181 HOH HOH A . L 5 HOH 106 406 53 HOH HOH A . L 5 HOH 107 407 5 HOH HOH A . L 5 HOH 108 408 72 HOH HOH A . L 5 HOH 109 409 68 HOH HOH A . L 5 HOH 110 410 28 HOH HOH A . L 5 HOH 111 411 31 HOH HOH A . L 5 HOH 112 412 166 HOH HOH A . L 5 HOH 113 413 50 HOH HOH A . L 5 HOH 114 414 146 HOH HOH A . L 5 HOH 115 415 135 HOH HOH A . L 5 HOH 116 416 100 HOH HOH A . L 5 HOH 117 417 88 HOH HOH A . L 5 HOH 118 418 112 HOH HOH A . L 5 HOH 119 419 174 HOH HOH A . L 5 HOH 120 420 130 HOH HOH A . L 5 HOH 121 421 164 HOH HOH A . L 5 HOH 122 422 55 HOH HOH A . L 5 HOH 123 423 85 HOH HOH A . L 5 HOH 124 424 172 HOH HOH A . L 5 HOH 125 425 106 HOH HOH A . L 5 HOH 126 426 79 HOH HOH A . L 5 HOH 127 427 161 HOH HOH A . L 5 HOH 128 428 98 HOH HOH A . L 5 HOH 129 429 105 HOH HOH A . L 5 HOH 130 430 103 HOH HOH A . L 5 HOH 131 431 96 HOH HOH A . L 5 HOH 132 432 176 HOH HOH A . L 5 HOH 133 433 154 HOH HOH A . L 5 HOH 134 434 170 HOH HOH A . L 5 HOH 135 435 104 HOH HOH A . L 5 HOH 136 436 160 HOH HOH A . L 5 HOH 137 437 124 HOH HOH A . L 5 HOH 138 438 89 HOH HOH A . L 5 HOH 139 439 107 HOH HOH A . L 5 HOH 140 440 175 HOH HOH A . L 5 HOH 141 441 117 HOH HOH A . L 5 HOH 142 442 123 HOH HOH A . L 5 HOH 143 443 95 HOH HOH A . L 5 HOH 144 444 109 HOH HOH A . L 5 HOH 145 445 56 HOH HOH A . L 5 HOH 146 446 121 HOH HOH A . L 5 HOH 147 447 179 HOH HOH A . L 5 HOH 148 448 132 HOH HOH A . L 5 HOH 149 449 90 HOH HOH A . L 5 HOH 150 450 168 HOH HOH A . L 5 HOH 151 451 108 HOH HOH A . L 5 HOH 152 452 82 HOH HOH A . L 5 HOH 153 453 93 HOH HOH A . L 5 HOH 154 454 187 HOH HOH A . L 5 HOH 155 455 177 HOH HOH A . L 5 HOH 156 456 155 HOH HOH A . L 5 HOH 157 457 185 HOH HOH A . L 5 HOH 158 458 180 HOH HOH A . L 5 HOH 159 459 152 HOH HOH A . L 5 HOH 160 460 119 HOH HOH A . L 5 HOH 161 461 125 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN -1 ? N ? A ASN 14 N 2 1 Y 1 A ASN -1 ? CA ? A ASN 14 CA 3 1 Y 1 A ASN -1 ? CB ? A ASN 14 CB 4 1 Y 1 A ASN -1 ? CG ? A ASN 14 CG 5 1 Y 1 A ASN -1 ? OD1 ? A ASN 14 OD1 6 1 Y 1 A ASN -1 ? ND2 ? A ASN 14 ND2 7 1 Y 1 A ARG 13 ? NE ? A ARG 28 NE 8 1 Y 1 A ARG 13 ? CZ ? A ARG 28 CZ 9 1 Y 1 A ARG 13 ? NH1 ? A ARG 28 NH1 10 1 Y 1 A ARG 13 ? NH2 ? A ARG 28 NH2 11 1 Y 1 A GLN 64 ? OE1 ? A GLN 79 OE1 12 1 Y 1 A ARG 98 ? NH2 ? A ARG 113 NH2 13 1 Y 1 A GLU 99 ? OE2 ? A GLU 114 OE2 14 1 Y 1 A LYS 123 ? NZ ? A LYS 138 NZ 15 1 Y 1 A LYS 126 ? CE ? A LYS 141 CE 16 1 Y 1 A LYS 126 ? NZ ? A LYS 141 NZ 17 1 Y 1 A GLU 129 ? O ? A GLU 144 O # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? 2.10.3 1 ? 'data reduction' ? ? 'Wolfgang Kabsch' Wolfgang.Kabsch@mpimf-heidelberg.mpg.de ? ? ? ? ? http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/ ? XDS ? ? package . 2 ? 'data scaling' ? ? 'Phil Evans' ? 13/12/18 ? ? ? ? http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html ? Aimless ? ? program 0.7.4 3 ? phasing ? ? 'Randy J. Read' cimr-phaser@lists.cam.ac.uk ? ? ? ? ? http://www-structmed.cimr.cam.ac.uk/phaser/ ? PHASER ? ? program . 4 ? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'Sep. 1, 2017' ? ? ? C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.24 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 6TOL _cell.details ? _cell.formula_units_Z ? _cell.length_a 67.143 _cell.length_a_esd ? _cell.length_b 67.143 _cell.length_b_esd ? _cell.length_c 167.452 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TOL _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6TOL _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.30 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 62.75 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;1.5 microliter of BCL6-BTB at 10 mg/mL plus 1.5 microliter of a crystallisation solution consisting of 0.1 M Tris pH 7.5 and 0.80 M Na/K Tartrate, against 300 microliter of crystallisation solution. ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-07-15 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9159 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I04-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9159 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I04-1 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 33.850 _reflns.entry_id 6TOL _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.640 _reflns.d_resolution_low 47.760 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 28338 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.000 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 23.600 _reflns.pdbx_Rmerge_I_obs 0.070 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 23.200 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects 600 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.072 _reflns.pdbx_Rpim_I_all 0.015 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 669285 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.000 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 1.640 1.670 ? ? 26708 ? ? ? 1345 100.000 ? ? ? ? 3.149 ? ? ? ? ? ? ? ? 19.900 ? ? ? 1.000 3.232 0.719 ? 1 1 0.544 ? ? 8.980 47.760 ? ? 4788 ? ? ? 242 99.500 ? ? ? ? 0.018 ? ? ? ? ? ? ? ? 19.800 ? ? ? 124.600 0.019 0.004 ? 2 1 1.000 ? ? # _refine.aniso_B[1][1] -1.7692 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] -1.7692 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 3.5383 _refine.B_iso_max 121.420 _refine.B_iso_mean 41.1100 _refine.B_iso_min 23.240 _refine.correlation_coeff_Fo_to_Fc 0.9640 _refine.correlation_coeff_Fo_to_Fc_free 0.9520 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6TOL _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.6400 _refine.ls_d_res_low 20.1300 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 28228 _refine.ls_number_reflns_R_free 1421 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 100.0000 _refine.ls_percent_reflns_R_free 5.0300 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1820 _refine.ls_R_factor_R_free 0.2050 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1810 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3BIM _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.0730 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.0790 _refine.pdbx_overall_SU_R_Blow_DPI 0.0790 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI 0.0710 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 6TOL _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs 0.210 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.6400 _refine_hist.d_res_low 20.1300 _refine_hist.number_atoms_solvent 174 _refine_hist.number_atoms_total 1279 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 131 _refine_hist.pdbx_B_iso_mean_ligand 49.30 _refine_hist.pdbx_B_iso_mean_solvent 55.51 _refine_hist.pdbx_number_atoms_protein 1032 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 73 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? ? ? 421 ? t_dihedral_angle_d 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? ? ? t_trig_c_planes ? ? 'X-RAY DIFFRACTION' ? ? ? 220 ? t_gen_planes 5.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 1173 ? t_it 20.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_nbd ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_improper_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_pseud_angle ? ? 'X-RAY DIFFRACTION' ? ? ? 151 ? t_chiral_improper_torsion 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? 21 ? t_sum_occupancies 1.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_distance ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_angle ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 1570 ? t_ideal_dist_contact 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? 0.010 ? 1173 ? t_bond_d 2.000 HARMONIC 'X-RAY DIFFRACTION' ? 0.990 ? 1580 ? t_angle_deg 2.000 HARMONIC 'X-RAY DIFFRACTION' ? 3.730 ? ? ? t_omega_torsion ? ? 'X-RAY DIFFRACTION' ? 14.560 ? ? ? t_other_torsion ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.6400 _refine_ls_shell.d_res_low 1.6500 _refine_ls_shell.number_reflns_all 565 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 30 _refine_ls_shell.number_reflns_R_work 535 _refine_ls_shell.percent_reflns_obs 99.8200 _refine_ls_shell.percent_reflns_R_free 5.3100 _refine_ls_shell.R_factor_all 0.2233 _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2519 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2215 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 50 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6TOL _struct.title 'Crystal structure of human BCL6 BTB domain in complex with compound 25a' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6TOL _struct_keywords.text 'Cancer, Lymphoma, Inhibitor, Degrader, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 4 ? L N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BCL6_HUMAN _struct_ref.pdbx_db_accession P41182 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFC ILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE ; _struct_ref.pdbx_align_begin 5 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6TOL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 20 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 144 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P41182 _struct_ref_seq.db_align_beg 5 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 129 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 5 _struct_ref_seq.pdbx_auth_seq_align_end 129 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6TOL GLY A 1 ? UNP P41182 ? ? 'expression tag' -14 1 1 6TOL PRO A 2 ? UNP P41182 ? ? 'expression tag' -13 2 1 6TOL GLY A 3 ? UNP P41182 ? ? 'expression tag' -12 3 1 6TOL LEU A 4 ? UNP P41182 ? ? 'expression tag' -11 4 1 6TOL ASP A 5 ? UNP P41182 ? ? 'expression tag' -10 5 1 6TOL TYR A 6 ? UNP P41182 ? ? 'expression tag' -9 6 1 6TOL LYS A 7 ? UNP P41182 ? ? 'expression tag' -8 7 1 6TOL ASP A 8 ? UNP P41182 ? ? 'expression tag' -7 8 1 6TOL ASP A 9 ? UNP P41182 ? ? 'expression tag' -6 9 1 6TOL ASP A 10 ? UNP P41182 ? ? 'expression tag' -5 10 1 6TOL ASP A 11 ? UNP P41182 ? ? 'expression tag' -4 11 1 6TOL LYS A 12 ? UNP P41182 ? ? 'expression tag' -3 12 1 6TOL GLU A 13 ? UNP P41182 ? ? 'expression tag' -2 13 1 6TOL ASN A 14 ? UNP P41182 ? ? 'expression tag' -1 14 1 6TOL LEU A 15 ? UNP P41182 ? ? 'expression tag' 0 15 1 6TOL TYR A 16 ? UNP P41182 ? ? 'expression tag' 1 16 1 6TOL PHE A 17 ? UNP P41182 ? ? 'expression tag' 2 17 1 6TOL GLN A 18 ? UNP P41182 ? ? 'expression tag' 3 18 1 6TOL GLY A 19 ? UNP P41182 ? ? 'expression tag' 4 19 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7220 ? 1 MORE -7 ? 1 'SSA (A^2)' 13720 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/6 0.5000000000 0.8660254038 0.0000000000 -33.5715000000 0.8660254038 -0.5000000000 0.0000000000 58.1475436863 0.0000000000 0.0000000000 -1.0000000000 27.9086666667 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG A 28 ? ARG A 43 ? ARG A 13 ARG A 28 1 ? 16 HELX_P HELX_P2 AA2 HIS A 61 ? SER A 69 ? HIS A 46 SER A 54 1 ? 9 HELX_P HELX_P3 AA3 SER A 69 ? THR A 77 ? SER A 54 THR A 62 1 ? 9 HELX_P HELX_P4 AA4 ASN A 94 ? SER A 108 ? ASN A 79 SER A 93 1 ? 15 HELX_P HELX_P5 AA5 ASN A 116 ? GLN A 128 ? ASN A 101 GLN A 113 1 ? 13 HELX_P HELX_P6 AA6 MET A 129 ? GLU A 144 ? MET A 114 GLU A 129 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 16 ? GLN A 18 ? TYR A 1 GLN A 3 AA1 2 ILE A 24 ? PHE A 26 ? ILE A 9 PHE A 11 AA2 1 GLU A 56 ? ALA A 60 ? GLU A 41 ALA A 45 AA2 2 VAL A 49 ? VAL A 53 ? VAL A 34 VAL A 38 AA2 3 VAL A 86 ? ASN A 88 ? VAL A 71 ASN A 73 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE A 17 ? N PHE A 2 O GLN A 25 ? O GLN A 10 AA2 1 2 O PHE A 58 ? O PHE A 43 N ILE A 51 ? N ILE A 36 AA2 2 3 N VAL A 52 ? N VAL A 37 O ILE A 87 ? O ILE A 72 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NQW 201 ? 17 'binding site for residue NQW A 201' AC2 Software A EDO 202 ? 4 'binding site for residue EDO A 202' AC3 Software A EDO 203 ? 1 'binding site for residue EDO A 203' AC4 Software A EDO 204 ? 5 'binding site for residue EDO A 204' AC5 Software A EDO 205 ? 8 'binding site for residue EDO A 205' AC6 Software A EDO 206 ? 2 'binding site for residue EDO A 206' AC7 Software A EDO 207 ? 6 'binding site for residue EDO A 207' AC8 Software A EDO 208 ? 3 'binding site for residue EDO A 208' AC9 Software A EDO 209 ? 5 'binding site for residue EDO A 209' AD1 Software A DMS 210 ? 1 'binding site for residue DMS A 210' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 ASP A 32 ? ASP A 17 . ? 12_565 ? 2 AC1 17 ASN A 36 ? ASN A 21 . ? 12_565 ? 3 AC1 17 LEU A 40 ? LEU A 25 . ? 12_565 ? 4 AC1 17 MET A 66 ? MET A 51 . ? 1_555 ? 5 AC1 17 ALA A 67 ? ALA A 52 . ? 1_555 ? 6 AC1 17 CYS A 68 ? CYS A 53 . ? 1_555 ? 7 AC1 17 GLY A 70 ? GLY A 55 . ? 1_555 ? 8 AC1 17 TYR A 73 ? TYR A 58 . ? 1_555 ? 9 AC1 17 GLN A 128 ? GLN A 113 . ? 1_555 ? 10 AC1 17 MET A 129 ? MET A 114 . ? 1_555 ? 11 AC1 17 GLU A 130 ? GLU A 115 . ? 1_555 ? 12 AC1 17 EDO E . ? EDO A 204 . ? 1_555 ? 13 AC1 17 EDO J . ? EDO A 209 . ? 1_555 ? 14 AC1 17 HOH L . ? HOH A 326 . ? 1_555 ? 15 AC1 17 HOH L . ? HOH A 339 . ? 1_555 ? 16 AC1 17 HOH L . ? HOH A 341 . ? 1_555 ? 17 AC1 17 HOH L . ? HOH A 356 . ? 1_555 ? 18 AC2 4 GLN A 18 ? GLN A 3 . ? 1_555 ? 19 AC2 4 ILE A 24 ? ILE A 9 . ? 1_555 ? 20 AC2 4 ASN A 88 ? ASN A 73 . ? 5_554 ? 21 AC2 4 HOH L . ? HOH A 337 . ? 1_555 ? 22 AC3 1 GLN A 57 ? GLN A 42 . ? 1_555 ? 23 AC4 5 GLU A 130 ? GLU A 115 . ? 1_555 ? 24 AC4 5 HIS A 131 ? HIS A 116 . ? 1_555 ? 25 AC4 5 NQW B . ? NQW A 201 . ? 1_555 ? 26 AC4 5 EDO J . ? EDO A 209 . ? 1_555 ? 27 AC4 5 HOH L . ? HOH A 346 . ? 1_555 ? 28 AC5 8 SER A 54 ? SER A 39 . ? 1_555 ? 29 AC5 8 PRO A 91 ? PRO A 76 . ? 1_555 ? 30 AC5 8 GLU A 92 ? GLU A 77 . ? 1_555 ? 31 AC5 8 ILE A 93 ? ILE A 78 . ? 1_555 ? 32 AC5 8 ASN A 94 ? ASN A 79 . ? 1_555 ? 33 AC5 8 HOH L . ? HOH A 336 . ? 11_455 ? 34 AC5 8 HOH L . ? HOH A 336 . ? 1_555 ? 35 AC5 8 HOH L . ? HOH A 414 . ? 1_555 ? 36 AC6 2 GLU A 114 ? GLU A 99 . ? 1_555 ? 37 AC6 2 SER A 143 ? SER A 128 . ? 1_555 ? 38 AC7 6 ASN A 38 ? ASN A 23 . ? 1_555 ? 39 AC7 6 ARG A 39 ? ARG A 24 . ? 1_555 ? 40 AC7 6 SER A 42 ? SER A 27 . ? 1_555 ? 41 AC7 6 HOH L . ? HOH A 342 . ? 1_555 ? 42 AC7 6 HOH L . ? HOH A 361 . ? 1_555 ? 43 AC7 6 HOH L . ? HOH A 364 . ? 1_555 ? 44 AC8 3 SER A 31 ? SER A 16 . ? 1_555 ? 45 AC8 3 HOH L . ? HOH A 328 . ? 1_555 ? 46 AC8 3 HOH L . ? HOH A 404 . ? 1_555 ? 47 AC9 5 ASN A 36 ? ASN A 21 . ? 12_565 ? 48 AC9 5 ARG A 39 ? ARG A 24 . ? 12_565 ? 49 AC9 5 NQW B . ? NQW A 201 . ? 1_555 ? 50 AC9 5 EDO E . ? EDO A 204 . ? 1_555 ? 51 AC9 5 HOH L . ? HOH A 351 . ? 1_555 ? 52 AD1 1 HOH L . ? HOH A 357 . ? 1_555 ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 39 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 53.62 _pdbx_validate_torsion.psi -128.35 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 397 ? L HOH . 2 1 A HOH 454 ? L HOH . # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -26.2739 28.5109 10.1219 -0.0326 ? -0.0232 ? -0.0203 ? -0.0087 ? 0.0303 ? -0.0371 ? 3.9431 ? 0.2968 ? -2.5716 ? 1.8609 ? -0.9113 ? 5.0204 ? 0.0806 ? 0.1046 ? 0.2793 ? 0.1004 ? -0.0072 ? -0.0611 ? -0.2635 ? 0.3006 ? -0.0734 ? 2 'X-RAY DIFFRACTION' ? refined -40.8665 16.2057 26.3095 -0.0352 ? -0.0309 ? 0.0540 ? -0.0149 ? 0.0498 ? -0.0412 ? 2.3554 ? -0.1879 ? -0.9234 ? 4.2721 ? -0.9150 ? 2.3868 ? 0.1539 ? -0.2167 ? -0.0620 ? 0.3651 ? 0.0997 ? 0.4668 ? -0.0186 ? -0.3012 ? -0.2536 ? 3 'X-RAY DIFFRACTION' ? refined -33.3746 10.2304 24.1626 0.0075 ? -0.0355 ? -0.0138 ? -0.0750 ? 0.0253 ? -0.0266 ? 1.6334 ? 1.4923 ? 0.1348 ? 3.3962 ? -0.7402 ? 1.8193 ? 0.0994 ? -0.0728 ? -0.1246 ? 0.1693 ? -0.0189 ? 0.0862 ? 0.2419 ? -0.1109 ? -0.0804 ? 4 'X-RAY DIFFRACTION' ? refined -21.9448 22.3373 33.3910 0.1409 ? -0.1012 ? -0.0610 ? -0.0173 ? 0.0211 ? -0.0672 ? 2.6242 ? 0.4909 ? 2.1502 ? 0.4501 ? 0.9434 ? 0.4032 ? 0.0935 ? -0.2745 ? 0.0139 ? 0.4048 ? -0.1881 ? -0.2218 ? -0.1506 ? -0.0777 ? 0.0946 ? 5 'X-RAY DIFFRACTION' ? refined -23.5077 10.1696 31.0411 0.0294 ? -0.0351 ? -0.0700 ? -0.0752 ? 0.0729 ? -0.0311 ? 2.1171 ? 1.3802 ? 0.0466 ? 4.4287 ? -0.1894 ? 4.5683 ? 0.2367 ? -0.2777 ? -0.3183 ? 0.4425 ? -0.2557 ? -0.3528 ? 0.1883 ? 0.2457 ? 0.0190 ? 6 'X-RAY DIFFRACTION' ? refined -13.5706 14.2118 30.4977 0.0029 ? -0.0227 ? -0.0975 ? -0.0265 ? 0.0888 ? 0.0796 ? 9.0474 ? 0.1690 ? 3.4497 ? 5.5342 ? -0.9976 ? 0.1210 ? -0.0108 ? 0.0835 ? -0.0462 ? 0.2770 ? -0.1903 ? -0.6419 ? -0.1614 ? 0.1824 ? 0.2011 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A -1 ? ? A 27 ? '{A|-1 - 27}' 2 'X-RAY DIFFRACTION' 2 ? ? A 28 ? ? A 46 ? '{A|28 - 46}' 3 'X-RAY DIFFRACTION' 3 ? ? A 47 ? ? A 92 ? '{A|47 - 92}' 4 'X-RAY DIFFRACTION' 4 ? ? A 93 ? ? A 101 ? '{A|93 - 101}' 5 'X-RAY DIFFRACTION' 5 ? ? A 102 ? ? A 114 ? '{A|102 - 114}' 6 'X-RAY DIFFRACTION' 6 ? ? A 115 ? ? A 129 ? '{A|115 - 129}' # _phasing.method MR # _pdbx_entry_details.entry_id 6TOL _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -14 ? A GLY 1 2 1 Y 1 A PRO -13 ? A PRO 2 3 1 Y 1 A GLY -12 ? A GLY 3 4 1 Y 1 A LEU -11 ? A LEU 4 5 1 Y 1 A ASP -10 ? A ASP 5 6 1 Y 1 A TYR -9 ? A TYR 6 7 1 Y 1 A LYS -8 ? A LYS 7 8 1 Y 1 A ASP -7 ? A ASP 8 9 1 Y 1 A ASP -6 ? A ASP 9 10 1 Y 1 A ASP -5 ? A ASP 10 11 1 Y 1 A ASP -4 ? A ASP 11 12 1 Y 1 A LYS -3 ? A LYS 12 13 1 Y 1 A GLU -2 ? A GLU 13 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DMS S S N N 88 DMS O O N N 89 DMS C1 C N N 90 DMS C2 C N N 91 DMS H11 H N N 92 DMS H12 H N N 93 DMS H13 H N N 94 DMS H21 H N N 95 DMS H22 H N N 96 DMS H23 H N N 97 EDO C1 C N N 98 EDO O1 O N N 99 EDO C2 C N N 100 EDO O2 O N N 101 EDO H11 H N N 102 EDO H12 H N N 103 EDO HO1 H N N 104 EDO H21 H N N 105 EDO H22 H N N 106 EDO HO2 H N N 107 GLN N N N N 108 GLN CA C N S 109 GLN C C N N 110 GLN O O N N 111 GLN CB C N N 112 GLN CG C N N 113 GLN CD C N N 114 GLN OE1 O N N 115 GLN NE2 N N N 116 GLN OXT O N N 117 GLN H H N N 118 GLN H2 H N N 119 GLN HA H N N 120 GLN HB2 H N N 121 GLN HB3 H N N 122 GLN HG2 H N N 123 GLN HG3 H N N 124 GLN HE21 H N N 125 GLN HE22 H N N 126 GLN HXT H N N 127 GLU N N N N 128 GLU CA C N S 129 GLU C C N N 130 GLU O O N N 131 GLU CB C N N 132 GLU CG C N N 133 GLU CD C N N 134 GLU OE1 O N N 135 GLU OE2 O N N 136 GLU OXT O N N 137 GLU H H N N 138 GLU H2 H N N 139 GLU HA H N N 140 GLU HB2 H N N 141 GLU HB3 H N N 142 GLU HG2 H N N 143 GLU HG3 H N N 144 GLU HE2 H N N 145 GLU HXT H N N 146 GLY N N N N 147 GLY CA C N N 148 GLY C C N N 149 GLY O O N N 150 GLY OXT O N N 151 GLY H H N N 152 GLY H2 H N N 153 GLY HA2 H N N 154 GLY HA3 H N N 155 GLY HXT H N N 156 HIS N N N N 157 HIS CA C N S 158 HIS C C N N 159 HIS O O N N 160 HIS CB C N N 161 HIS CG C Y N 162 HIS ND1 N Y N 163 HIS CD2 C Y N 164 HIS CE1 C Y N 165 HIS NE2 N Y N 166 HIS OXT O N N 167 HIS H H N N 168 HIS H2 H N N 169 HIS HA H N N 170 HIS HB2 H N N 171 HIS HB3 H N N 172 HIS HD1 H N N 173 HIS HD2 H N N 174 HIS HE1 H N N 175 HIS HE2 H N N 176 HIS HXT H N N 177 HOH O O N N 178 HOH H1 H N N 179 HOH H2 H N N 180 ILE N N N N 181 ILE CA C N S 182 ILE C C N N 183 ILE O O N N 184 ILE CB C N S 185 ILE CG1 C N N 186 ILE CG2 C N N 187 ILE CD1 C N N 188 ILE OXT O N N 189 ILE H H N N 190 ILE H2 H N N 191 ILE HA H N N 192 ILE HB H N N 193 ILE HG12 H N N 194 ILE HG13 H N N 195 ILE HG21 H N N 196 ILE HG22 H N N 197 ILE HG23 H N N 198 ILE HD11 H N N 199 ILE HD12 H N N 200 ILE HD13 H N N 201 ILE HXT H N N 202 LEU N N N N 203 LEU CA C N S 204 LEU C C N N 205 LEU O O N N 206 LEU CB C N N 207 LEU CG C N N 208 LEU CD1 C N N 209 LEU CD2 C N N 210 LEU OXT O N N 211 LEU H H N N 212 LEU H2 H N N 213 LEU HA H N N 214 LEU HB2 H N N 215 LEU HB3 H N N 216 LEU HG H N N 217 LEU HD11 H N N 218 LEU HD12 H N N 219 LEU HD13 H N N 220 LEU HD21 H N N 221 LEU HD22 H N N 222 LEU HD23 H N N 223 LEU HXT H N N 224 LYS N N N N 225 LYS CA C N S 226 LYS C C N N 227 LYS O O N N 228 LYS CB C N N 229 LYS CG C N N 230 LYS CD C N N 231 LYS CE C N N 232 LYS NZ N N N 233 LYS OXT O N N 234 LYS H H N N 235 LYS H2 H N N 236 LYS HA H N N 237 LYS HB2 H N N 238 LYS HB3 H N N 239 LYS HG2 H N N 240 LYS HG3 H N N 241 LYS HD2 H N N 242 LYS HD3 H N N 243 LYS HE2 H N N 244 LYS HE3 H N N 245 LYS HZ1 H N N 246 LYS HZ2 H N N 247 LYS HZ3 H N N 248 LYS HXT H N N 249 MET N N N N 250 MET CA C N S 251 MET C C N N 252 MET O O N N 253 MET CB C N N 254 MET CG C N N 255 MET SD S N N 256 MET CE C N N 257 MET OXT O N N 258 MET H H N N 259 MET H2 H N N 260 MET HA H N N 261 MET HB2 H N N 262 MET HB3 H N N 263 MET HG2 H N N 264 MET HG3 H N N 265 MET HE1 H N N 266 MET HE2 H N N 267 MET HE3 H N N 268 MET HXT H N N 269 NQW CL CL N N 270 NQW C21 C Y N 271 NQW C22 C Y N 272 NQW N5 N Y N 273 NQW C6 C Y N 274 NQW N N N N 275 NQW C2 C N N 276 NQW C3 C N N 277 NQW C4 C N R 278 NQW C5 C N N 279 NQW O O N N 280 NQW C1 C N S 281 NQW C C N N 282 NQW C7 C Y N 283 NQW N1 N Y N 284 NQW N2 N N N 285 NQW C8 C Y N 286 NQW C13 C Y N 287 NQW C12 C Y N 288 NQW C11 C Y N 289 NQW N3 N N N 290 NQW C14 C N N 291 NQW C15 C N N 292 NQW O1 O N N 293 NQW N4 N N N 294 NQW C10 C Y N 295 NQW C9 C Y N 296 NQW C16 C N N 297 NQW C17 C N N 298 NQW C18 C N N 299 NQW O2 O N N 300 NQW C20 C N N 301 NQW C19 C N N 302 NQW H1 H N N 303 NQW H2 H N N 304 NQW H3 H N N 305 NQW H4 H N N 306 NQW H5 H N N 307 NQW H6 H N N 308 NQW H7 H N N 309 NQW H8 H N N 310 NQW H9 H N N 311 NQW H10 H N N 312 NQW H11 H N N 313 NQW H12 H N N 314 NQW H13 H N N 315 NQW H14 H N N 316 NQW H15 H N N 317 NQW H16 H N N 318 NQW H17 H N N 319 NQW H18 H N N 320 NQW H19 H N N 321 NQW H20 H N N 322 NQW H21 H N N 323 NQW H22 H N N 324 NQW H23 H N N 325 NQW H24 H N N 326 NQW H25 H N N 327 NQW H26 H N N 328 NQW H27 H N N 329 NQW H28 H N N 330 NQW H29 H N N 331 NQW H30 H N N 332 NQW H31 H N N 333 PHE N N N N 334 PHE CA C N S 335 PHE C C N N 336 PHE O O N N 337 PHE CB C N N 338 PHE CG C Y N 339 PHE CD1 C Y N 340 PHE CD2 C Y N 341 PHE CE1 C Y N 342 PHE CE2 C Y N 343 PHE CZ C Y N 344 PHE OXT O N N 345 PHE H H N N 346 PHE H2 H N N 347 PHE HA H N N 348 PHE HB2 H N N 349 PHE HB3 H N N 350 PHE HD1 H N N 351 PHE HD2 H N N 352 PHE HE1 H N N 353 PHE HE2 H N N 354 PHE HZ H N N 355 PHE HXT H N N 356 PRO N N N N 357 PRO CA C N S 358 PRO C C N N 359 PRO O O N N 360 PRO CB C N N 361 PRO CG C N N 362 PRO CD C N N 363 PRO OXT O N N 364 PRO H H N N 365 PRO HA H N N 366 PRO HB2 H N N 367 PRO HB3 H N N 368 PRO HG2 H N N 369 PRO HG3 H N N 370 PRO HD2 H N N 371 PRO HD3 H N N 372 PRO HXT H N N 373 SER N N N N 374 SER CA C N S 375 SER C C N N 376 SER O O N N 377 SER CB C N N 378 SER OG O N N 379 SER OXT O N N 380 SER H H N N 381 SER H2 H N N 382 SER HA H N N 383 SER HB2 H N N 384 SER HB3 H N N 385 SER HG H N N 386 SER HXT H N N 387 THR N N N N 388 THR CA C N S 389 THR C C N N 390 THR O O N N 391 THR CB C N R 392 THR OG1 O N N 393 THR CG2 C N N 394 THR OXT O N N 395 THR H H N N 396 THR H2 H N N 397 THR HA H N N 398 THR HB H N N 399 THR HG1 H N N 400 THR HG21 H N N 401 THR HG22 H N N 402 THR HG23 H N N 403 THR HXT H N N 404 TYR N N N N 405 TYR CA C N S 406 TYR C C N N 407 TYR O O N N 408 TYR CB C N N 409 TYR CG C Y N 410 TYR CD1 C Y N 411 TYR CD2 C Y N 412 TYR CE1 C Y N 413 TYR CE2 C Y N 414 TYR CZ C Y N 415 TYR OH O N N 416 TYR OXT O N N 417 TYR H H N N 418 TYR H2 H N N 419 TYR HA H N N 420 TYR HB2 H N N 421 TYR HB3 H N N 422 TYR HD1 H N N 423 TYR HD2 H N N 424 TYR HE1 H N N 425 TYR HE2 H N N 426 TYR HH H N N 427 TYR HXT H N N 428 VAL N N N N 429 VAL CA C N S 430 VAL C C N N 431 VAL O O N N 432 VAL CB C N N 433 VAL CG1 C N N 434 VAL CG2 C N N 435 VAL OXT O N N 436 VAL H H N N 437 VAL H2 H N N 438 VAL HA H N N 439 VAL HB H N N 440 VAL HG11 H N N 441 VAL HG12 H N N 442 VAL HG13 H N N 443 VAL HG21 H N N 444 VAL HG22 H N N 445 VAL HG23 H N N 446 VAL HXT H N N 447 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DMS S O doub N N 83 DMS S C1 sing N N 84 DMS S C2 sing N N 85 DMS C1 H11 sing N N 86 DMS C1 H12 sing N N 87 DMS C1 H13 sing N N 88 DMS C2 H21 sing N N 89 DMS C2 H22 sing N N 90 DMS C2 H23 sing N N 91 EDO C1 O1 sing N N 92 EDO C1 C2 sing N N 93 EDO C1 H11 sing N N 94 EDO C1 H12 sing N N 95 EDO O1 HO1 sing N N 96 EDO C2 O2 sing N N 97 EDO C2 H21 sing N N 98 EDO C2 H22 sing N N 99 EDO O2 HO2 sing N N 100 GLN N CA sing N N 101 GLN N H sing N N 102 GLN N H2 sing N N 103 GLN CA C sing N N 104 GLN CA CB sing N N 105 GLN CA HA sing N N 106 GLN C O doub N N 107 GLN C OXT sing N N 108 GLN CB CG sing N N 109 GLN CB HB2 sing N N 110 GLN CB HB3 sing N N 111 GLN CG CD sing N N 112 GLN CG HG2 sing N N 113 GLN CG HG3 sing N N 114 GLN CD OE1 doub N N 115 GLN CD NE2 sing N N 116 GLN NE2 HE21 sing N N 117 GLN NE2 HE22 sing N N 118 GLN OXT HXT sing N N 119 GLU N CA sing N N 120 GLU N H sing N N 121 GLU N H2 sing N N 122 GLU CA C sing N N 123 GLU CA CB sing N N 124 GLU CA HA sing N N 125 GLU C O doub N N 126 GLU C OXT sing N N 127 GLU CB CG sing N N 128 GLU CB HB2 sing N N 129 GLU CB HB3 sing N N 130 GLU CG CD sing N N 131 GLU CG HG2 sing N N 132 GLU CG HG3 sing N N 133 GLU CD OE1 doub N N 134 GLU CD OE2 sing N N 135 GLU OE2 HE2 sing N N 136 GLU OXT HXT sing N N 137 GLY N CA sing N N 138 GLY N H sing N N 139 GLY N H2 sing N N 140 GLY CA C sing N N 141 GLY CA HA2 sing N N 142 GLY CA HA3 sing N N 143 GLY C O doub N N 144 GLY C OXT sing N N 145 GLY OXT HXT sing N N 146 HIS N CA sing N N 147 HIS N H sing N N 148 HIS N H2 sing N N 149 HIS CA C sing N N 150 HIS CA CB sing N N 151 HIS CA HA sing N N 152 HIS C O doub N N 153 HIS C OXT sing N N 154 HIS CB CG sing N N 155 HIS CB HB2 sing N N 156 HIS CB HB3 sing N N 157 HIS CG ND1 sing Y N 158 HIS CG CD2 doub Y N 159 HIS ND1 CE1 doub Y N 160 HIS ND1 HD1 sing N N 161 HIS CD2 NE2 sing Y N 162 HIS CD2 HD2 sing N N 163 HIS CE1 NE2 sing Y N 164 HIS CE1 HE1 sing N N 165 HIS NE2 HE2 sing N N 166 HIS OXT HXT sing N N 167 HOH O H1 sing N N 168 HOH O H2 sing N N 169 ILE N CA sing N N 170 ILE N H sing N N 171 ILE N H2 sing N N 172 ILE CA C sing N N 173 ILE CA CB sing N N 174 ILE CA HA sing N N 175 ILE C O doub N N 176 ILE C OXT sing N N 177 ILE CB CG1 sing N N 178 ILE CB CG2 sing N N 179 ILE CB HB sing N N 180 ILE CG1 CD1 sing N N 181 ILE CG1 HG12 sing N N 182 ILE CG1 HG13 sing N N 183 ILE CG2 HG21 sing N N 184 ILE CG2 HG22 sing N N 185 ILE CG2 HG23 sing N N 186 ILE CD1 HD11 sing N N 187 ILE CD1 HD12 sing N N 188 ILE CD1 HD13 sing N N 189 ILE OXT HXT sing N N 190 LEU N CA sing N N 191 LEU N H sing N N 192 LEU N H2 sing N N 193 LEU CA C sing N N 194 LEU CA CB sing N N 195 LEU CA HA sing N N 196 LEU C O doub N N 197 LEU C OXT sing N N 198 LEU CB CG sing N N 199 LEU CB HB2 sing N N 200 LEU CB HB3 sing N N 201 LEU CG CD1 sing N N 202 LEU CG CD2 sing N N 203 LEU CG HG sing N N 204 LEU CD1 HD11 sing N N 205 LEU CD1 HD12 sing N N 206 LEU CD1 HD13 sing N N 207 LEU CD2 HD21 sing N N 208 LEU CD2 HD22 sing N N 209 LEU CD2 HD23 sing N N 210 LEU OXT HXT sing N N 211 LYS N CA sing N N 212 LYS N H sing N N 213 LYS N H2 sing N N 214 LYS CA C sing N N 215 LYS CA CB sing N N 216 LYS CA HA sing N N 217 LYS C O doub N N 218 LYS C OXT sing N N 219 LYS CB CG sing N N 220 LYS CB HB2 sing N N 221 LYS CB HB3 sing N N 222 LYS CG CD sing N N 223 LYS CG HG2 sing N N 224 LYS CG HG3 sing N N 225 LYS CD CE sing N N 226 LYS CD HD2 sing N N 227 LYS CD HD3 sing N N 228 LYS CE NZ sing N N 229 LYS CE HE2 sing N N 230 LYS CE HE3 sing N N 231 LYS NZ HZ1 sing N N 232 LYS NZ HZ2 sing N N 233 LYS NZ HZ3 sing N N 234 LYS OXT HXT sing N N 235 MET N CA sing N N 236 MET N H sing N N 237 MET N H2 sing N N 238 MET CA C sing N N 239 MET CA CB sing N N 240 MET CA HA sing N N 241 MET C O doub N N 242 MET C OXT sing N N 243 MET CB CG sing N N 244 MET CB HB2 sing N N 245 MET CB HB3 sing N N 246 MET CG SD sing N N 247 MET CG HG2 sing N N 248 MET CG HG3 sing N N 249 MET SD CE sing N N 250 MET CE HE1 sing N N 251 MET CE HE2 sing N N 252 MET CE HE3 sing N N 253 MET OXT HXT sing N N 254 NQW C5 C4 sing N N 255 NQW C3 C4 sing N N 256 NQW C3 N sing N N 257 NQW C4 O sing N N 258 NQW N5 C22 doub Y N 259 NQW N5 C6 sing Y N 260 NQW O C1 sing N N 261 NQW C22 C21 sing Y N 262 NQW N C6 sing N N 263 NQW N C2 sing N N 264 NQW C6 N1 doub Y N 265 NQW C2 C1 sing N N 266 NQW C1 C sing N N 267 NQW C21 CL sing N N 268 NQW C21 C7 doub Y N 269 NQW N1 C7 sing Y N 270 NQW C7 N2 sing N N 271 NQW N2 C8 sing N N 272 NQW C8 C13 doub Y N 273 NQW C8 C9 sing Y N 274 NQW C13 C12 sing Y N 275 NQW C20 C18 sing N N 276 NQW C9 C10 doub Y N 277 NQW C12 C11 doub Y N 278 NQW C19 C18 sing N N 279 NQW C17 C18 sing N N 280 NQW C17 C16 sing N N 281 NQW C18 O2 sing N N 282 NQW C10 C11 sing Y N 283 NQW C10 N4 sing N N 284 NQW C11 N3 sing N N 285 NQW N4 C16 sing N N 286 NQW N4 C15 sing N N 287 NQW N3 C14 sing N N 288 NQW N3 C15 sing N N 289 NQW C15 O1 doub N N 290 NQW C22 H1 sing N N 291 NQW C2 H2 sing N N 292 NQW C2 H3 sing N N 293 NQW C3 H4 sing N N 294 NQW C3 H5 sing N N 295 NQW C4 H6 sing N N 296 NQW C5 H7 sing N N 297 NQW C5 H8 sing N N 298 NQW C5 H9 sing N N 299 NQW C1 H10 sing N N 300 NQW C H11 sing N N 301 NQW C H12 sing N N 302 NQW C H13 sing N N 303 NQW N2 H14 sing N N 304 NQW C13 H15 sing N N 305 NQW C12 H16 sing N N 306 NQW C14 H17 sing N N 307 NQW C14 H18 sing N N 308 NQW C14 H19 sing N N 309 NQW C9 H20 sing N N 310 NQW C16 H21 sing N N 311 NQW C16 H22 sing N N 312 NQW C17 H23 sing N N 313 NQW C17 H24 sing N N 314 NQW O2 H25 sing N N 315 NQW C20 H26 sing N N 316 NQW C20 H27 sing N N 317 NQW C20 H28 sing N N 318 NQW C19 H29 sing N N 319 NQW C19 H30 sing N N 320 NQW C19 H31 sing N N 321 PHE N CA sing N N 322 PHE N H sing N N 323 PHE N H2 sing N N 324 PHE CA C sing N N 325 PHE CA CB sing N N 326 PHE CA HA sing N N 327 PHE C O doub N N 328 PHE C OXT sing N N 329 PHE CB CG sing N N 330 PHE CB HB2 sing N N 331 PHE CB HB3 sing N N 332 PHE CG CD1 doub Y N 333 PHE CG CD2 sing Y N 334 PHE CD1 CE1 sing Y N 335 PHE CD1 HD1 sing N N 336 PHE CD2 CE2 doub Y N 337 PHE CD2 HD2 sing N N 338 PHE CE1 CZ doub Y N 339 PHE CE1 HE1 sing N N 340 PHE CE2 CZ sing Y N 341 PHE CE2 HE2 sing N N 342 PHE CZ HZ sing N N 343 PHE OXT HXT sing N N 344 PRO N CA sing N N 345 PRO N CD sing N N 346 PRO N H sing N N 347 PRO CA C sing N N 348 PRO CA CB sing N N 349 PRO CA HA sing N N 350 PRO C O doub N N 351 PRO C OXT sing N N 352 PRO CB CG sing N N 353 PRO CB HB2 sing N N 354 PRO CB HB3 sing N N 355 PRO CG CD sing N N 356 PRO CG HG2 sing N N 357 PRO CG HG3 sing N N 358 PRO CD HD2 sing N N 359 PRO CD HD3 sing N N 360 PRO OXT HXT sing N N 361 SER N CA sing N N 362 SER N H sing N N 363 SER N H2 sing N N 364 SER CA C sing N N 365 SER CA CB sing N N 366 SER CA HA sing N N 367 SER C O doub N N 368 SER C OXT sing N N 369 SER CB OG sing N N 370 SER CB HB2 sing N N 371 SER CB HB3 sing N N 372 SER OG HG sing N N 373 SER OXT HXT sing N N 374 THR N CA sing N N 375 THR N H sing N N 376 THR N H2 sing N N 377 THR CA C sing N N 378 THR CA CB sing N N 379 THR CA HA sing N N 380 THR C O doub N N 381 THR C OXT sing N N 382 THR CB OG1 sing N N 383 THR CB CG2 sing N N 384 THR CB HB sing N N 385 THR OG1 HG1 sing N N 386 THR CG2 HG21 sing N N 387 THR CG2 HG22 sing N N 388 THR CG2 HG23 sing N N 389 THR OXT HXT sing N N 390 TYR N CA sing N N 391 TYR N H sing N N 392 TYR N H2 sing N N 393 TYR CA C sing N N 394 TYR CA CB sing N N 395 TYR CA HA sing N N 396 TYR C O doub N N 397 TYR C OXT sing N N 398 TYR CB CG sing N N 399 TYR CB HB2 sing N N 400 TYR CB HB3 sing N N 401 TYR CG CD1 doub Y N 402 TYR CG CD2 sing Y N 403 TYR CD1 CE1 sing Y N 404 TYR CD1 HD1 sing N N 405 TYR CD2 CE2 doub Y N 406 TYR CD2 HD2 sing N N 407 TYR CE1 CZ doub Y N 408 TYR CE1 HE1 sing N N 409 TYR CE2 CZ sing Y N 410 TYR CE2 HE2 sing N N 411 TYR CZ OH sing N N 412 TYR OH HH sing N N 413 TYR OXT HXT sing N N 414 VAL N CA sing N N 415 VAL N H sing N N 416 VAL N H2 sing N N 417 VAL CA C sing N N 418 VAL CA CB sing N N 419 VAL CA HA sing N N 420 VAL C O doub N N 421 VAL C OXT sing N N 422 VAL CB CG1 sing N N 423 VAL CB CG2 sing N N 424 VAL CB HB sing N N 425 VAL CG1 HG11 sing N N 426 VAL CG1 HG12 sing N N 427 VAL CG1 HG13 sing N N 428 VAL CG2 HG21 sing N N 429 VAL CG2 HG22 sing N N 430 VAL CG2 HG23 sing N N 431 VAL OXT HXT sing N N 432 # _pdbx_audit_support.funding_organization 'Cancer Research UK' _pdbx_audit_support.country 'United Kingdom' _pdbx_audit_support.grant_number C309/A11566 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id NQW _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id NQW _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3BIM _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 6TOL _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.014894 _atom_sites.fract_transf_matrix[1][2] 0.008599 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017198 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005972 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CL N O S # loop_