data_6W0M # _entry.id 6W0M # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6W0M pdb_00006w0m 10.2210/pdb6w0m/pdb WWPDB D_1000247381 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6W0M _pdbx_database_status.recvd_initial_deposition_date 2020-03-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Shigdel, U.' 1 0000-0003-2259-3719 'Verdine, G.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 11 _citation.language ? _citation.page_first 4437 _citation.page_last 4437 _citation.title 'The trajectory of intrahelical lesion recognition and extrusion by the human 8-oxoguanine DNA glycosylase.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-020-18290-2 _citation.pdbx_database_id_PubMed 32895378 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shigdel, U.K.' 1 ? primary 'Ovchinnikov, V.' 2 ? primary 'Lee, S.J.' 3 ? primary 'Shih, J.A.' 4 ? primary 'Karplus, M.' 5 ? primary 'Nam, K.' 6 0000-0003-0723-7839 primary 'Verdine, G.L.' 7 0000-0002-2195-364X # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 6W0M _cell.details ? _cell.formula_units_Z ? _cell.length_a 91.678 _cell.length_a_esd ? _cell.length_b 91.678 _cell.length_b_esd ? _cell.length_c 212.106 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6W0M _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'N-glycosylase/DNA lyase' 35586.238 1 3.2.2.-,4.2.99.18 'E122Q, Y207C, K249Q' ? ? 2 polymer syn ;DNA (5'-D(P*CP*GP*TP*CP*CP*AP*(8OG)P*GP*TP*CP*TP*AP*C)-3') ; 3943.561 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(P*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3') ; 4635.010 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 5 non-polymer syn '2-(2-ethoxyethoxy)ethanethiol' 150.239 1 ? ? ? ? 6 water nat water 18.015 98 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSEGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRP TPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQQVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGP RLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARCVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGT QVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQ ; ;GSEGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRP TPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQQVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGP RLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARCVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGT QVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQ ; A ? 2 polydeoxyribonucleotide no yes '(DC)(DG)(DT)(DC)(DC)(DA)(8OG)(DG)(DT)(DC)(DT)(DA)(DC)' CGTCCAGGTCTAC B ? 3 polydeoxyribonucleotide no no '(DG)(DG)(DT)(DA)(DG)(DA)(DC)(DC)(DT)(DG)(DG)(DA)(DC)(DG)(DC)' GGTAGACCTGGACGC C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 GLU n 1 4 GLY n 1 5 HIS n 1 6 ARG n 1 7 THR n 1 8 LEU n 1 9 ALA n 1 10 SER n 1 11 THR n 1 12 PRO n 1 13 ALA n 1 14 LEU n 1 15 TRP n 1 16 ALA n 1 17 SER n 1 18 ILE n 1 19 PRO n 1 20 CYS n 1 21 PRO n 1 22 ARG n 1 23 SER n 1 24 GLU n 1 25 LEU n 1 26 ARG n 1 27 LEU n 1 28 ASP n 1 29 LEU n 1 30 VAL n 1 31 LEU n 1 32 PRO n 1 33 SER n 1 34 GLY n 1 35 GLN n 1 36 SER n 1 37 PHE n 1 38 ARG n 1 39 TRP n 1 40 ARG n 1 41 GLU n 1 42 GLN n 1 43 SER n 1 44 PRO n 1 45 ALA n 1 46 HIS n 1 47 TRP n 1 48 SER n 1 49 GLY n 1 50 VAL n 1 51 LEU n 1 52 ALA n 1 53 ASP n 1 54 GLN n 1 55 VAL n 1 56 TRP n 1 57 THR n 1 58 LEU n 1 59 THR n 1 60 GLN n 1 61 THR n 1 62 GLU n 1 63 GLU n 1 64 GLN n 1 65 LEU n 1 66 HIS n 1 67 CYS n 1 68 THR n 1 69 VAL n 1 70 TYR n 1 71 ARG n 1 72 GLY n 1 73 ASP n 1 74 LYS n 1 75 SER n 1 76 GLN n 1 77 ALA n 1 78 SER n 1 79 ARG n 1 80 PRO n 1 81 THR n 1 82 PRO n 1 83 ASP n 1 84 GLU n 1 85 LEU n 1 86 GLU n 1 87 ALA n 1 88 VAL n 1 89 ARG n 1 90 LYS n 1 91 TYR n 1 92 PHE n 1 93 GLN n 1 94 LEU n 1 95 ASP n 1 96 VAL n 1 97 THR n 1 98 LEU n 1 99 ALA n 1 100 GLN n 1 101 LEU n 1 102 TYR n 1 103 HIS n 1 104 HIS n 1 105 TRP n 1 106 GLY n 1 107 SER n 1 108 VAL n 1 109 ASP n 1 110 SER n 1 111 HIS n 1 112 PHE n 1 113 GLN n 1 114 GLN n 1 115 VAL n 1 116 ALA n 1 117 GLN n 1 118 LYS n 1 119 PHE n 1 120 GLN n 1 121 GLY n 1 122 VAL n 1 123 ARG n 1 124 LEU n 1 125 LEU n 1 126 ARG n 1 127 GLN n 1 128 ASP n 1 129 PRO n 1 130 ILE n 1 131 GLU n 1 132 CYS n 1 133 LEU n 1 134 PHE n 1 135 SER n 1 136 PHE n 1 137 ILE n 1 138 CYS n 1 139 SER n 1 140 SER n 1 141 ASN n 1 142 ASN n 1 143 ASN n 1 144 ILE n 1 145 ALA n 1 146 ARG n 1 147 ILE n 1 148 THR n 1 149 GLY n 1 150 MET n 1 151 VAL n 1 152 GLU n 1 153 ARG n 1 154 LEU n 1 155 CYS n 1 156 GLN n 1 157 ALA n 1 158 PHE n 1 159 GLY n 1 160 PRO n 1 161 ARG n 1 162 LEU n 1 163 ILE n 1 164 GLN n 1 165 LEU n 1 166 ASP n 1 167 ASP n 1 168 VAL n 1 169 THR n 1 170 TYR n 1 171 HIS n 1 172 GLY n 1 173 PHE n 1 174 PRO n 1 175 SER n 1 176 LEU n 1 177 GLN n 1 178 ALA n 1 179 LEU n 1 180 ALA n 1 181 GLY n 1 182 PRO n 1 183 GLU n 1 184 VAL n 1 185 GLU n 1 186 ALA n 1 187 HIS n 1 188 LEU n 1 189 ARG n 1 190 LYS n 1 191 LEU n 1 192 GLY n 1 193 LEU n 1 194 GLY n 1 195 TYR n 1 196 ARG n 1 197 ALA n 1 198 ARG n 1 199 CYS n 1 200 VAL n 1 201 SER n 1 202 ALA n 1 203 SER n 1 204 ALA n 1 205 ARG n 1 206 ALA n 1 207 ILE n 1 208 LEU n 1 209 GLU n 1 210 GLU n 1 211 GLN n 1 212 GLY n 1 213 GLY n 1 214 LEU n 1 215 ALA n 1 216 TRP n 1 217 LEU n 1 218 GLN n 1 219 GLN n 1 220 LEU n 1 221 ARG n 1 222 GLU n 1 223 SER n 1 224 SER n 1 225 TYR n 1 226 GLU n 1 227 GLU n 1 228 ALA n 1 229 HIS n 1 230 LYS n 1 231 ALA n 1 232 LEU n 1 233 CYS n 1 234 ILE n 1 235 LEU n 1 236 PRO n 1 237 GLY n 1 238 VAL n 1 239 GLY n 1 240 THR n 1 241 GLN n 1 242 VAL n 1 243 ALA n 1 244 ASP n 1 245 CYS n 1 246 ILE n 1 247 CYS n 1 248 LEU n 1 249 MET n 1 250 ALA n 1 251 LEU n 1 252 ASP n 1 253 LYS n 1 254 PRO n 1 255 GLN n 1 256 ALA n 1 257 VAL n 1 258 PRO n 1 259 VAL n 1 260 ASP n 1 261 VAL n 1 262 HIS n 1 263 MET n 1 264 TRP n 1 265 HIS n 1 266 ILE n 1 267 ALA n 1 268 GLN n 1 269 ARG n 1 270 ASP n 1 271 TYR n 1 272 SER n 1 273 TRP n 1 274 HIS n 1 275 PRO n 1 276 THR n 1 277 THR n 1 278 SER n 1 279 GLN n 1 280 ALA n 1 281 LYS n 1 282 GLY n 1 283 PRO n 1 284 SER n 1 285 PRO n 1 286 GLN n 1 287 THR n 1 288 ASN n 1 289 LYS n 1 290 GLU n 1 291 LEU n 1 292 GLY n 1 293 ASN n 1 294 PHE n 1 295 PHE n 1 296 ARG n 1 297 SER n 1 298 LEU n 1 299 TRP n 1 300 GLY n 1 301 PRO n 1 302 TYR n 1 303 ALA n 1 304 GLY n 1 305 TRP n 1 306 ALA n 1 307 GLN n 1 308 ALA n 1 309 VAL n 1 310 LEU n 1 311 PHE n 1 312 SER n 1 313 ALA n 1 314 ASP n 1 315 LEU n 1 316 ARG n 1 317 GLN n 2 1 DC n 2 2 DG n 2 3 DT n 2 4 DC n 2 5 DC n 2 6 DA n 2 7 8OG n 2 8 DG n 2 9 DT n 2 10 DC n 2 11 DT n 2 12 DA n 2 13 DC n 3 1 DG n 3 2 DG n 3 3 DT n 3 4 DA n 3 5 DG n 3 6 DA n 3 7 DC n 3 8 DC n 3 9 DT n 3 10 DG n 3 11 DG n 3 12 DA n 3 13 DC n 3 14 DG n 3 15 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 317 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'OGG1, MMH, MUTM, OGH1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 13 'Homo sapiens' ? 9606 ? 3 1 sample 1 15 'Homo sapiens' ? 9606 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP OGG1_HUMAN O15527 ? 1 ;GHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRPTPD ELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLI QLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGTKVA DCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQ ; 12 2 PDB 6W0M 6W0M ? 2 ? 1 3 PDB 6W0M 6W0M ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6W0M A 4 ? 317 ? O15527 12 ? 325 ? 12 325 2 2 6W0M B 1 ? 13 ? 6W0M 19 ? 31 ? 19 31 3 3 6W0M C 1 ? 15 ? 6W0M 2 ? 16 ? 2 16 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6W0M GLY A 1 ? UNP O15527 ? ? 'expression tag' 9 1 1 6W0M SER A 2 ? UNP O15527 ? ? 'expression tag' 10 2 1 6W0M GLU A 3 ? UNP O15527 ? ? 'expression tag' 11 3 1 6W0M GLN A 114 ? UNP O15527 GLU 122 'engineered mutation' 122 4 1 6W0M CYS A 199 ? UNP O15527 TYR 207 'engineered mutation' 207 5 1 6W0M GLN A 241 ? UNP O15527 LYS 249 'engineered mutation' 249 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8OG 'DNA linking' n "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" "8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 'C10 H14 N5 O8 P' 363.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 S5Y non-polymer . '2-(2-ethoxyethoxy)ethanethiol' ? 'C6 H14 O2 S' 150.239 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6W0M _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.91 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 57.78 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM sodium cacodylate, pH 6.5, 200 mM MgCl2, and 18 % polyethylene glycol 8000.' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100.000 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-03-19 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6W0M _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.370 _reflns.d_resolution_low 45.840 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 22361 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.83 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 20.7 _reflns.pdbx_Rmerge_I_obs 0.086 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 35.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.37 _reflns_shell.d_res_low 2.50 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 3154 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.746 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 0.2000 _refine.aniso_B[1][2] 0.1000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 0.2000 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -0.3000 _refine.B_iso_max 197.300 _refine.B_iso_mean 42.9740 _refine.B_iso_min 11.750 _refine.correlation_coeff_Fo_to_Fc 0.9500 _refine.correlation_coeff_Fo_to_Fc_free 0.9040 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6W0M _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.3700 _refine.ls_d_res_low 45.8400 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 21148 _refine.ls_number_reflns_R_free 1139 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.8300 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2000 _refine.ls_R_factor_R_free 0.2655 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1967 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1EBM _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.2870 _refine.pdbx_overall_ESU_R_Free 0.2470 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 7.0140 _refine.overall_SU_ML 0.1660 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.3700 _refine_hist.d_res_low 45.8400 _refine_hist.number_atoms_solvent 100 _refine_hist.number_atoms_total 3171 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 341 _refine_hist.pdbx_B_iso_mean_ligand 69.99 _refine_hist.pdbx_B_iso_mean_solvent 44.04 _refine_hist.pdbx_number_atoms_protein 2485 _refine_hist.pdbx_number_atoms_nucleic_acid 575 _refine_hist.pdbx_number_atoms_ligand 11 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 0.018 3176 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 2017 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.448 1.824 4439 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.188 3.000 4852 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.997 5.000 314 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 33.938 23.220 118 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 13.218 15.000 383 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 16.652 15.000 19 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.078 0.200 457 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.021 3197 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 690 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.3700 _refine_ls_shell.d_res_low 2.4280 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 69 _refine_ls_shell.number_reflns_R_work 1308 _refine_ls_shell.percent_reflns_obs 98.3600 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3540 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2710 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6W0M _struct.title 'Human 8-oxoguanine glycosylase crosslinked with oxoG lesion containing DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6W0M _struct_keywords.text 'hOGG1, 8-oxoG, Encounter complex, Interrogation complex, DNA BINDING PROTEIN, Lyase-DNA complex' _struct_keywords.pdbx_keywords Lyase/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 11 ? TRP A 15 ? THR A 19 TRP A 23 5 ? 5 HELX_P HELX_P2 AA2 ARG A 26 ? LEU A 31 ? ARG A 34 LEU A 39 1 ? 6 HELX_P HELX_P3 AA3 THR A 81 ? GLN A 93 ? THR A 89 GLN A 101 1 ? 13 HELX_P HELX_P4 AA4 THR A 97 ? ASP A 109 ? THR A 105 ASP A 117 1 ? 13 HELX_P HELX_P5 AA5 ASP A 109 ? PHE A 119 ? ASP A 117 PHE A 127 1 ? 11 HELX_P HELX_P6 AA6 ASP A 128 ? SER A 139 ? ASP A 136 SER A 147 1 ? 12 HELX_P HELX_P7 AA7 ASN A 143 ? GLY A 159 ? ASN A 151 GLY A 167 1 ? 17 HELX_P HELX_P8 AA8 SER A 175 ? GLY A 181 ? SER A 183 GLY A 189 1 ? 7 HELX_P HELX_P9 AA9 GLU A 183 ? LEU A 191 ? GLU A 191 LEU A 199 1 ? 9 HELX_P HELX_P10 AB1 TYR A 195 ? GLU A 210 ? TYR A 203 GLU A 218 1 ? 16 HELX_P HELX_P11 AB2 GLY A 213 ? GLN A 219 ? GLY A 221 GLN A 227 1 ? 7 HELX_P HELX_P12 AB3 LEU A 220 ? GLU A 222 ? LEU A 228 GLU A 230 5 ? 3 HELX_P HELX_P13 AB4 SER A 224 ? ILE A 234 ? SER A 232 ILE A 242 1 ? 11 HELX_P HELX_P14 AB5 GLY A 239 ? ALA A 250 ? GLY A 247 ALA A 258 1 ? 12 HELX_P HELX_P15 AB6 ASP A 260 ? SER A 272 ? ASP A 268 SER A 280 1 ? 13 HELX_P HELX_P16 AB7 SER A 284 ? GLY A 300 ? SER A 292 GLY A 308 1 ? 17 HELX_P HELX_P17 AB8 TYR A 302 ? ARG A 316 ? TYR A 310 ARG A 324 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DA 6 "O3'" ? ? ? 1_555 B 8OG 7 P ? ? B DA 24 B 8OG 25 1_555 ? ? ? ? ? ? ? 1.568 ? ? covale2 covale both ? B 8OG 7 "O3'" ? ? ? 1_555 B DG 8 P ? ? B 8OG 25 B DG 26 1_555 ? ? ? ? ? ? ? 1.598 ? ? metalc1 metalc ? ? A LEU 14 O ? ? ? 1_555 D MG . MG ? ? A LEU 22 A MG 401 1_555 ? ? ? ? ? ? ? 2.846 ? ? metalc2 metalc ? ? A SER 78 O ? ? ? 1_555 D MG . MG ? ? A SER 86 A MG 401 1_555 ? ? ? ? ? ? ? 2.551 ? ? metalc3 metalc ? ? A CYS 233 O ? ? ? 1_555 E MG . MG ? ? A CYS 241 A MG 402 1_555 ? ? ? ? ? ? ? 2.336 ? ? metalc4 metalc ? ? A LEU 235 O ? ? ? 1_555 E MG . MG ? ? A LEU 243 A MG 402 1_555 ? ? ? ? ? ? ? 2.519 ? ? metalc5 metalc ? ? A VAL 238 O ? ? ? 1_555 E MG . MG ? ? A VAL 246 A MG 402 1_555 ? ? ? ? ? ? ? 2.567 ? ? metalc6 metalc ? ? E MG . MG ? ? ? 1_555 G HOH . O ? ? A MG 402 A HOH 581 1_555 ? ? ? ? ? ? ? 2.651 ? ? metalc7 metalc ? ? E MG . MG ? ? ? 1_555 B DC 10 OP1 ? ? A MG 402 B DC 28 1_555 ? ? ? ? ? ? ? 2.569 ? ? metalc8 metalc ? ? E MG . MG ? ? ? 1_555 B DC 10 OP2 ? ? A MG 402 B DC 28 1_555 ? ? ? ? ? ? ? 2.583 ? ? hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 C DG 14 N1 ? ? B DC 19 C DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 1 N4 ? ? ? 1_555 C DG 14 O6 ? ? B DC 19 C DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 1 O2 ? ? ? 1_555 C DG 14 N2 ? ? B DC 19 C DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 13 N3 ? ? B DG 20 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 13 O2 ? ? B DG 20 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 13 N4 ? ? B DG 20 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DT 3 N3 ? ? ? 1_555 C DA 12 N1 ? ? B DT 21 C DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DT 3 O4 ? ? ? 1_555 C DA 12 N6 ? ? B DT 21 C DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DC 4 N3 ? ? ? 1_555 C DG 11 N1 ? ? B DC 22 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DC 4 N4 ? ? ? 1_555 C DG 11 O6 ? ? B DC 22 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 4 O2 ? ? ? 1_555 C DG 11 N2 ? ? B DC 22 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 5 N3 ? ? ? 1_555 C DG 10 N1 ? ? B DC 23 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 5 N4 ? ? ? 1_555 C DG 10 O6 ? ? B DC 23 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 5 O2 ? ? ? 1_555 C DG 10 N2 ? ? B DC 23 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DA 6 N1 ? ? ? 1_555 C DT 9 N3 ? ? B DA 24 C DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DA 6 N6 ? ? ? 1_555 C DT 9 O4 ? ? B DA 24 C DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 8 N1 ? ? ? 1_555 C DC 7 N3 ? ? B DG 26 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DG 8 N2 ? ? ? 1_555 C DC 7 O2 ? ? B DG 26 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DG 8 O6 ? ? ? 1_555 C DC 7 N4 ? ? B DG 26 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DT 9 N3 ? ? ? 1_555 C DA 6 N1 ? ? B DT 27 C DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DT 9 O4 ? ? ? 1_555 C DA 6 N6 ? ? B DT 27 C DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DC 10 N3 ? ? ? 1_555 C DG 5 N1 ? ? B DC 28 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 10 N4 ? ? ? 1_555 C DG 5 O6 ? ? B DC 28 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DC 10 O2 ? ? ? 1_555 C DG 5 N2 ? ? B DC 28 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DT 11 N3 ? ? ? 1_555 C DA 4 N1 ? ? B DT 29 C DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DT 11 O4 ? ? ? 1_555 C DA 4 N6 ? ? B DT 29 C DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DA 12 N1 ? ? ? 1_555 C DT 3 N3 ? ? B DA 30 C DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DA 12 N6 ? ? ? 1_555 C DT 3 O4 ? ? B DA 30 C DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DC 13 O2 ? ? ? 1_555 C DG 2 N2 ? ? B DC 31 C DG 3 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 16 ? PRO A 19 ? ALA A 24 PRO A 27 AA1 2 GLN A 64 ? TYR A 70 ? GLN A 72 TYR A 78 AA1 3 GLN A 54 ? GLN A 60 ? GLN A 62 GLN A 68 AA1 4 HIS A 46 ? LEU A 51 ? HIS A 54 LEU A 59 AA1 5 TRP A 39 ? SER A 43 ? TRP A 47 SER A 51 AA2 1 ARG A 161 ? LEU A 165 ? ARG A 169 LEU A 173 AA2 2 VAL A 168 ? HIS A 171 ? VAL A 176 HIS A 179 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ALA A 16 ? N ALA A 24 O CYS A 67 ? O CYS A 75 AA1 2 3 O HIS A 66 ? O HIS A 74 N THR A 59 ? N THR A 67 AA1 3 4 O LEU A 58 ? O LEU A 66 N TRP A 47 ? N TRP A 55 AA1 4 5 O SER A 48 ? O SER A 56 N ARG A 40 ? N ARG A 48 AA2 1 2 N LEU A 162 ? N LEU A 170 O TYR A 170 ? O TYR A 178 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 401 ? 6 'binding site for residue MG A 401' AC2 Software A MG 402 ? 5 'binding site for residue MG A 402' AC3 Software A S5Y 403 ? 6 'binding site for residue S5Y A 403' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ARG A 6 ? ARG A 14 . ? 1_555 ? 2 AC1 6 LEU A 14 ? LEU A 22 . ? 1_555 ? 3 AC1 6 THR A 68 ? THR A 76 . ? 1_555 ? 4 AC1 6 VAL A 69 ? VAL A 77 . ? 1_555 ? 5 AC1 6 SER A 78 ? SER A 86 . ? 1_555 ? 6 AC1 6 PRO A 80 ? PRO A 88 . ? 1_555 ? 7 AC2 5 CYS A 233 ? CYS A 241 . ? 1_555 ? 8 AC2 5 LEU A 235 ? LEU A 243 . ? 1_555 ? 9 AC2 5 VAL A 238 ? VAL A 246 . ? 1_555 ? 10 AC2 5 HOH G . ? HOH A 581 . ? 1_555 ? 11 AC2 5 DC B 10 ? DC B 28 . ? 1_555 ? 12 AC3 6 TYR A 195 ? TYR A 203 . ? 1_555 ? 13 AC3 6 CYS A 199 ? CYS A 207 . ? 1_555 ? 14 AC3 6 DG B 8 ? DG B 26 . ? 1_555 ? 15 AC3 6 DT B 9 ? DT B 27 . ? 1_555 ? 16 AC3 6 DC B 10 ? DC B 28 . ? 1_555 ? 17 AC3 6 DC C 7 ? DC C 8 . ? 1_555 ? # _atom_sites.entry_id 6W0M _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.010908 _atom_sites.fract_transf_matrix[1][2] 0.006298 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012595 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004715 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 9 9 GLY GLY A . n A 1 2 SER 2 10 10 SER SER A . n A 1 3 GLU 3 11 11 GLU GLU A . n A 1 4 GLY 4 12 12 GLY GLY A . n A 1 5 HIS 5 13 13 HIS HIS A . n A 1 6 ARG 6 14 14 ARG ARG A . n A 1 7 THR 7 15 15 THR THR A . n A 1 8 LEU 8 16 16 LEU LEU A . n A 1 9 ALA 9 17 17 ALA ALA A . n A 1 10 SER 10 18 18 SER SER A . n A 1 11 THR 11 19 19 THR THR A . n A 1 12 PRO 12 20 20 PRO PRO A . n A 1 13 ALA 13 21 21 ALA ALA A . n A 1 14 LEU 14 22 22 LEU LEU A . n A 1 15 TRP 15 23 23 TRP TRP A . n A 1 16 ALA 16 24 24 ALA ALA A . n A 1 17 SER 17 25 25 SER SER A . n A 1 18 ILE 18 26 26 ILE ILE A . n A 1 19 PRO 19 27 27 PRO PRO A . n A 1 20 CYS 20 28 28 CYS CYS A . n A 1 21 PRO 21 29 29 PRO PRO A . n A 1 22 ARG 22 30 30 ARG ARG A . n A 1 23 SER 23 31 31 SER SER A . n A 1 24 GLU 24 32 32 GLU GLU A . n A 1 25 LEU 25 33 33 LEU LEU A . n A 1 26 ARG 26 34 34 ARG ARG A . n A 1 27 LEU 27 35 35 LEU LEU A . n A 1 28 ASP 28 36 36 ASP ASP A . n A 1 29 LEU 29 37 37 LEU LEU A . n A 1 30 VAL 30 38 38 VAL VAL A . n A 1 31 LEU 31 39 39 LEU LEU A . n A 1 32 PRO 32 40 40 PRO PRO A . n A 1 33 SER 33 41 41 SER SER A . n A 1 34 GLY 34 42 42 GLY GLY A . n A 1 35 GLN 35 43 43 GLN GLN A . n A 1 36 SER 36 44 44 SER SER A . n A 1 37 PHE 37 45 45 PHE PHE A . n A 1 38 ARG 38 46 46 ARG ARG A . n A 1 39 TRP 39 47 47 TRP TRP A . n A 1 40 ARG 40 48 48 ARG ARG A . n A 1 41 GLU 41 49 49 GLU GLU A . n A 1 42 GLN 42 50 50 GLN GLN A . n A 1 43 SER 43 51 51 SER SER A . n A 1 44 PRO 44 52 52 PRO PRO A . n A 1 45 ALA 45 53 53 ALA ALA A . n A 1 46 HIS 46 54 54 HIS HIS A . n A 1 47 TRP 47 55 55 TRP TRP A . n A 1 48 SER 48 56 56 SER SER A . n A 1 49 GLY 49 57 57 GLY GLY A . n A 1 50 VAL 50 58 58 VAL VAL A . n A 1 51 LEU 51 59 59 LEU LEU A . n A 1 52 ALA 52 60 60 ALA ALA A . n A 1 53 ASP 53 61 61 ASP ASP A . n A 1 54 GLN 54 62 62 GLN GLN A . n A 1 55 VAL 55 63 63 VAL VAL A . n A 1 56 TRP 56 64 64 TRP TRP A . n A 1 57 THR 57 65 65 THR THR A . n A 1 58 LEU 58 66 66 LEU LEU A . n A 1 59 THR 59 67 67 THR THR A . n A 1 60 GLN 60 68 68 GLN GLN A . n A 1 61 THR 61 69 69 THR THR A . n A 1 62 GLU 62 70 70 GLU GLU A . n A 1 63 GLU 63 71 71 GLU GLU A . n A 1 64 GLN 64 72 72 GLN GLN A . n A 1 65 LEU 65 73 73 LEU LEU A . n A 1 66 HIS 66 74 74 HIS HIS A . n A 1 67 CYS 67 75 75 CYS CYS A . n A 1 68 THR 68 76 76 THR THR A . n A 1 69 VAL 69 77 77 VAL VAL A . n A 1 70 TYR 70 78 78 TYR TYR A . n A 1 71 ARG 71 79 79 ARG ARG A . n A 1 72 GLY 72 80 ? ? ? A . n A 1 73 ASP 73 81 ? ? ? A . n A 1 74 LYS 74 82 ? ? ? A . n A 1 75 SER 75 83 83 SER SER A . n A 1 76 GLN 76 84 84 GLN GLN A . n A 1 77 ALA 77 85 85 ALA ALA A . n A 1 78 SER 78 86 86 SER SER A . n A 1 79 ARG 79 87 87 ARG ARG A . n A 1 80 PRO 80 88 88 PRO PRO A . n A 1 81 THR 81 89 89 THR THR A . n A 1 82 PRO 82 90 90 PRO PRO A . n A 1 83 ASP 83 91 91 ASP ASP A . n A 1 84 GLU 84 92 92 GLU GLU A . n A 1 85 LEU 85 93 93 LEU LEU A . n A 1 86 GLU 86 94 94 GLU GLU A . n A 1 87 ALA 87 95 95 ALA ALA A . n A 1 88 VAL 88 96 96 VAL VAL A . n A 1 89 ARG 89 97 97 ARG ARG A . n A 1 90 LYS 90 98 98 LYS LYS A . n A 1 91 TYR 91 99 99 TYR TYR A . n A 1 92 PHE 92 100 100 PHE PHE A . n A 1 93 GLN 93 101 101 GLN GLN A . n A 1 94 LEU 94 102 102 LEU LEU A . n A 1 95 ASP 95 103 103 ASP ASP A . n A 1 96 VAL 96 104 104 VAL VAL A . n A 1 97 THR 97 105 105 THR THR A . n A 1 98 LEU 98 106 106 LEU LEU A . n A 1 99 ALA 99 107 107 ALA ALA A . n A 1 100 GLN 100 108 108 GLN GLN A . n A 1 101 LEU 101 109 109 LEU LEU A . n A 1 102 TYR 102 110 110 TYR TYR A . n A 1 103 HIS 103 111 111 HIS HIS A . n A 1 104 HIS 104 112 112 HIS HIS A . n A 1 105 TRP 105 113 113 TRP TRP A . n A 1 106 GLY 106 114 114 GLY GLY A . n A 1 107 SER 107 115 115 SER SER A . n A 1 108 VAL 108 116 116 VAL VAL A . n A 1 109 ASP 109 117 117 ASP ASP A . n A 1 110 SER 110 118 118 SER SER A . n A 1 111 HIS 111 119 119 HIS HIS A . n A 1 112 PHE 112 120 120 PHE PHE A . n A 1 113 GLN 113 121 121 GLN GLN A . n A 1 114 GLN 114 122 122 GLN GLN A . n A 1 115 VAL 115 123 123 VAL VAL A . n A 1 116 ALA 116 124 124 ALA ALA A . n A 1 117 GLN 117 125 125 GLN GLN A . n A 1 118 LYS 118 126 126 LYS LYS A . n A 1 119 PHE 119 127 127 PHE PHE A . n A 1 120 GLN 120 128 128 GLN GLN A . n A 1 121 GLY 121 129 129 GLY GLY A . n A 1 122 VAL 122 130 130 VAL VAL A . n A 1 123 ARG 123 131 131 ARG ARG A . n A 1 124 LEU 124 132 132 LEU LEU A . n A 1 125 LEU 125 133 133 LEU LEU A . n A 1 126 ARG 126 134 134 ARG ARG A . n A 1 127 GLN 127 135 135 GLN GLN A . n A 1 128 ASP 128 136 136 ASP ASP A . n A 1 129 PRO 129 137 137 PRO PRO A . n A 1 130 ILE 130 138 138 ILE ILE A . n A 1 131 GLU 131 139 139 GLU GLU A . n A 1 132 CYS 132 140 140 CYS CYS A . n A 1 133 LEU 133 141 141 LEU LEU A . n A 1 134 PHE 134 142 142 PHE PHE A . n A 1 135 SER 135 143 143 SER SER A . n A 1 136 PHE 136 144 144 PHE PHE A . n A 1 137 ILE 137 145 145 ILE ILE A . n A 1 138 CYS 138 146 146 CYS CYS A . n A 1 139 SER 139 147 147 SER SER A . n A 1 140 SER 140 148 148 SER SER A . n A 1 141 ASN 141 149 149 ASN ASN A . n A 1 142 ASN 142 150 150 ASN ASN A . n A 1 143 ASN 143 151 151 ASN ASN A . n A 1 144 ILE 144 152 152 ILE ILE A . n A 1 145 ALA 145 153 153 ALA ALA A . n A 1 146 ARG 146 154 154 ARG ARG A . n A 1 147 ILE 147 155 155 ILE ILE A . n A 1 148 THR 148 156 156 THR THR A . n A 1 149 GLY 149 157 157 GLY GLY A . n A 1 150 MET 150 158 158 MET MET A . n A 1 151 VAL 151 159 159 VAL VAL A . n A 1 152 GLU 152 160 160 GLU GLU A . n A 1 153 ARG 153 161 161 ARG ARG A . n A 1 154 LEU 154 162 162 LEU LEU A . n A 1 155 CYS 155 163 163 CYS CYS A . n A 1 156 GLN 156 164 164 GLN GLN A . n A 1 157 ALA 157 165 165 ALA ALA A . n A 1 158 PHE 158 166 166 PHE PHE A . n A 1 159 GLY 159 167 167 GLY GLY A . n A 1 160 PRO 160 168 168 PRO PRO A . n A 1 161 ARG 161 169 169 ARG ARG A . n A 1 162 LEU 162 170 170 LEU LEU A . n A 1 163 ILE 163 171 171 ILE ILE A . n A 1 164 GLN 164 172 172 GLN GLN A . n A 1 165 LEU 165 173 173 LEU LEU A . n A 1 166 ASP 166 174 174 ASP ASP A . n A 1 167 ASP 167 175 175 ASP ASP A . n A 1 168 VAL 168 176 176 VAL VAL A . n A 1 169 THR 169 177 177 THR THR A . n A 1 170 TYR 170 178 178 TYR TYR A . n A 1 171 HIS 171 179 179 HIS HIS A . n A 1 172 GLY 172 180 180 GLY GLY A . n A 1 173 PHE 173 181 181 PHE PHE A . n A 1 174 PRO 174 182 182 PRO PRO A . n A 1 175 SER 175 183 183 SER SER A . n A 1 176 LEU 176 184 184 LEU LEU A . n A 1 177 GLN 177 185 185 GLN GLN A . n A 1 178 ALA 178 186 186 ALA ALA A . n A 1 179 LEU 179 187 187 LEU LEU A . n A 1 180 ALA 180 188 188 ALA ALA A . n A 1 181 GLY 181 189 189 GLY GLY A . n A 1 182 PRO 182 190 190 PRO PRO A . n A 1 183 GLU 183 191 191 GLU GLU A . n A 1 184 VAL 184 192 192 VAL VAL A . n A 1 185 GLU 185 193 193 GLU GLU A . n A 1 186 ALA 186 194 194 ALA ALA A . n A 1 187 HIS 187 195 195 HIS HIS A . n A 1 188 LEU 188 196 196 LEU LEU A . n A 1 189 ARG 189 197 197 ARG ARG A . n A 1 190 LYS 190 198 198 LYS LYS A . n A 1 191 LEU 191 199 199 LEU LEU A . n A 1 192 GLY 192 200 200 GLY GLY A . n A 1 193 LEU 193 201 201 LEU LEU A . n A 1 194 GLY 194 202 202 GLY GLY A . n A 1 195 TYR 195 203 203 TYR TYR A . n A 1 196 ARG 196 204 204 ARG ARG A . n A 1 197 ALA 197 205 205 ALA ALA A . n A 1 198 ARG 198 206 206 ARG ARG A . n A 1 199 CYS 199 207 207 CYS CYS A . n A 1 200 VAL 200 208 208 VAL VAL A . n A 1 201 SER 201 209 209 SER SER A . n A 1 202 ALA 202 210 210 ALA ALA A . n A 1 203 SER 203 211 211 SER SER A . n A 1 204 ALA 204 212 212 ALA ALA A . n A 1 205 ARG 205 213 213 ARG ARG A . n A 1 206 ALA 206 214 214 ALA ALA A . n A 1 207 ILE 207 215 215 ILE ILE A . n A 1 208 LEU 208 216 216 LEU LEU A . n A 1 209 GLU 209 217 217 GLU GLU A . n A 1 210 GLU 210 218 218 GLU GLU A . n A 1 211 GLN 211 219 219 GLN GLN A . n A 1 212 GLY 212 220 220 GLY GLY A . n A 1 213 GLY 213 221 221 GLY GLY A . n A 1 214 LEU 214 222 222 LEU LEU A . n A 1 215 ALA 215 223 223 ALA ALA A . n A 1 216 TRP 216 224 224 TRP TRP A . n A 1 217 LEU 217 225 225 LEU LEU A . n A 1 218 GLN 218 226 226 GLN GLN A . n A 1 219 GLN 219 227 227 GLN GLN A . n A 1 220 LEU 220 228 228 LEU LEU A . n A 1 221 ARG 221 229 229 ARG ARG A . n A 1 222 GLU 222 230 230 GLU GLU A . n A 1 223 SER 223 231 231 SER SER A . n A 1 224 SER 224 232 232 SER SER A . n A 1 225 TYR 225 233 233 TYR TYR A . n A 1 226 GLU 226 234 234 GLU GLU A . n A 1 227 GLU 227 235 235 GLU GLU A . n A 1 228 ALA 228 236 236 ALA ALA A . n A 1 229 HIS 229 237 237 HIS HIS A . n A 1 230 LYS 230 238 238 LYS LYS A . n A 1 231 ALA 231 239 239 ALA ALA A . n A 1 232 LEU 232 240 240 LEU LEU A . n A 1 233 CYS 233 241 241 CYS CYS A . n A 1 234 ILE 234 242 242 ILE ILE A . n A 1 235 LEU 235 243 243 LEU LEU A . n A 1 236 PRO 236 244 244 PRO PRO A . n A 1 237 GLY 237 245 245 GLY GLY A . n A 1 238 VAL 238 246 246 VAL VAL A . n A 1 239 GLY 239 247 247 GLY GLY A . n A 1 240 THR 240 248 248 THR THR A . n A 1 241 GLN 241 249 249 GLN GLN A . n A 1 242 VAL 242 250 250 VAL VAL A . n A 1 243 ALA 243 251 251 ALA ALA A . n A 1 244 ASP 244 252 252 ASP ASP A . n A 1 245 CYS 245 253 253 CYS CYS A . n A 1 246 ILE 246 254 254 ILE ILE A . n A 1 247 CYS 247 255 255 CYS CYS A . n A 1 248 LEU 248 256 256 LEU LEU A . n A 1 249 MET 249 257 257 MET MET A . n A 1 250 ALA 250 258 258 ALA ALA A . n A 1 251 LEU 251 259 259 LEU LEU A . n A 1 252 ASP 252 260 260 ASP ASP A . n A 1 253 LYS 253 261 261 LYS LYS A . n A 1 254 PRO 254 262 262 PRO PRO A . n A 1 255 GLN 255 263 263 GLN GLN A . n A 1 256 ALA 256 264 264 ALA ALA A . n A 1 257 VAL 257 265 265 VAL VAL A . n A 1 258 PRO 258 266 266 PRO PRO A . n A 1 259 VAL 259 267 267 VAL VAL A . n A 1 260 ASP 260 268 268 ASP ASP A . n A 1 261 VAL 261 269 269 VAL VAL A . n A 1 262 HIS 262 270 270 HIS HIS A . n A 1 263 MET 263 271 271 MET MET A . n A 1 264 TRP 264 272 272 TRP TRP A . n A 1 265 HIS 265 273 273 HIS HIS A . n A 1 266 ILE 266 274 274 ILE ILE A . n A 1 267 ALA 267 275 275 ALA ALA A . n A 1 268 GLN 268 276 276 GLN GLN A . n A 1 269 ARG 269 277 277 ARG ARG A . n A 1 270 ASP 270 278 278 ASP ASP A . n A 1 271 TYR 271 279 279 TYR TYR A . n A 1 272 SER 272 280 280 SER SER A . n A 1 273 TRP 273 281 281 TRP TRP A . n A 1 274 HIS 274 282 282 HIS HIS A . n A 1 275 PRO 275 283 283 PRO PRO A . n A 1 276 THR 276 284 284 THR THR A . n A 1 277 THR 277 285 285 THR THR A . n A 1 278 SER 278 286 286 SER SER A . n A 1 279 GLN 279 287 287 GLN GLN A . n A 1 280 ALA 280 288 288 ALA ALA A . n A 1 281 LYS 281 289 289 LYS LYS A . n A 1 282 GLY 282 290 290 GLY GLY A . n A 1 283 PRO 283 291 291 PRO PRO A . n A 1 284 SER 284 292 292 SER SER A . n A 1 285 PRO 285 293 293 PRO PRO A . n A 1 286 GLN 286 294 294 GLN GLN A . n A 1 287 THR 287 295 295 THR THR A . n A 1 288 ASN 288 296 296 ASN ASN A . n A 1 289 LYS 289 297 297 LYS LYS A . n A 1 290 GLU 290 298 298 GLU GLU A . n A 1 291 LEU 291 299 299 LEU LEU A . n A 1 292 GLY 292 300 300 GLY GLY A . n A 1 293 ASN 293 301 301 ASN ASN A . n A 1 294 PHE 294 302 302 PHE PHE A . n A 1 295 PHE 295 303 303 PHE PHE A . n A 1 296 ARG 296 304 304 ARG ARG A . n A 1 297 SER 297 305 305 SER SER A . n A 1 298 LEU 298 306 306 LEU LEU A . n A 1 299 TRP 299 307 307 TRP TRP A . n A 1 300 GLY 300 308 308 GLY GLY A . n A 1 301 PRO 301 309 309 PRO PRO A . n A 1 302 TYR 302 310 310 TYR TYR A . n A 1 303 ALA 303 311 311 ALA ALA A . n A 1 304 GLY 304 312 312 GLY GLY A . n A 1 305 TRP 305 313 313 TRP TRP A . n A 1 306 ALA 306 314 314 ALA ALA A . n A 1 307 GLN 307 315 315 GLN GLN A . n A 1 308 ALA 308 316 316 ALA ALA A . n A 1 309 VAL 309 317 317 VAL VAL A . n A 1 310 LEU 310 318 318 LEU LEU A . n A 1 311 PHE 311 319 319 PHE PHE A . n A 1 312 SER 312 320 320 SER SER A . n A 1 313 ALA 313 321 321 ALA ALA A . n A 1 314 ASP 314 322 322 ASP ASP A . n A 1 315 LEU 315 323 323 LEU LEU A . n A 1 316 ARG 316 324 324 ARG ARG A . n A 1 317 GLN 317 325 325 GLN GLN A . n B 2 1 DC 1 19 19 DC DC B . n B 2 2 DG 2 20 20 DG DG B . n B 2 3 DT 3 21 21 DT DT B . n B 2 4 DC 4 22 22 DC DC B . n B 2 5 DC 5 23 23 DC DC B . n B 2 6 DA 6 24 24 DA DA B . n B 2 7 8OG 7 25 25 8OG 8OG B . n B 2 8 DG 8 26 26 DG DG B . n B 2 9 DT 9 27 27 DT DT B . n B 2 10 DC 10 28 28 DC DC B . n B 2 11 DT 11 29 29 DT DT B . n B 2 12 DA 12 30 30 DA DA B . n B 2 13 DC 13 31 31 DC DC B . n C 3 1 DG 1 2 2 DG DG C . n C 3 2 DG 2 3 3 DG DG C . n C 3 3 DT 3 4 4 DT DT C . n C 3 4 DA 4 5 5 DA DA C . n C 3 5 DG 5 6 6 DG DG C . n C 3 6 DA 6 7 7 DA DA C . n C 3 7 DC 7 8 8 DC DC C . n C 3 8 DC 8 9 9 DC DC C . n C 3 9 DT 9 10 10 DT DT C . n C 3 10 DG 10 11 11 DG DG C . n C 3 11 DG 11 12 12 DG DG C . n C 3 12 DA 12 13 13 DA DA C . n C 3 13 DC 13 14 14 DC DC C . n C 3 14 DG 14 15 15 DG DG C . n C 3 15 DC 15 16 16 DC DC C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG 1 401 1 MG MG A . E 4 MG 1 402 2 MG MG A . F 5 S5Y 1 403 1 S5Y INX A . G 6 HOH 1 501 4 HOH HOH A . G 6 HOH 2 502 7 HOH HOH A . G 6 HOH 3 503 42 HOH HOH A . G 6 HOH 4 504 76 HOH HOH A . G 6 HOH 5 505 19 HOH HOH A . G 6 HOH 6 506 54 HOH HOH A . G 6 HOH 7 507 11 HOH HOH A . G 6 HOH 8 508 3 HOH HOH A . G 6 HOH 9 509 28 HOH HOH A . G 6 HOH 10 510 15 HOH HOH A . G 6 HOH 11 511 82 HOH HOH A . G 6 HOH 12 512 40 HOH HOH A . G 6 HOH 13 513 6 HOH HOH A . G 6 HOH 14 514 78 HOH HOH A . G 6 HOH 15 515 83 HOH HOH A . G 6 HOH 16 516 8 HOH HOH A . G 6 HOH 17 517 115 HOH HOH A . G 6 HOH 18 518 72 HOH HOH A . G 6 HOH 19 519 16 HOH HOH A . G 6 HOH 20 520 30 HOH HOH A . G 6 HOH 21 521 29 HOH HOH A . G 6 HOH 22 522 57 HOH HOH A . G 6 HOH 23 523 33 HOH HOH A . G 6 HOH 24 524 118 HOH HOH A . G 6 HOH 25 525 36 HOH HOH A . G 6 HOH 26 526 89 HOH HOH A . G 6 HOH 27 527 45 HOH HOH A . G 6 HOH 28 528 65 HOH HOH A . G 6 HOH 29 529 107 HOH HOH A . G 6 HOH 30 530 105 HOH HOH A . G 6 HOH 31 531 58 HOH HOH A . G 6 HOH 32 532 41 HOH HOH A . G 6 HOH 33 533 13 HOH HOH A . G 6 HOH 34 534 47 HOH HOH A . G 6 HOH 35 535 61 HOH HOH A . G 6 HOH 36 536 91 HOH HOH A . G 6 HOH 37 537 9 HOH HOH A . G 6 HOH 38 538 119 HOH HOH A . G 6 HOH 39 539 102 HOH HOH A . G 6 HOH 40 540 64 HOH HOH A . G 6 HOH 41 541 88 HOH HOH A . G 6 HOH 42 542 17 HOH HOH A . G 6 HOH 43 543 87 HOH HOH A . G 6 HOH 44 544 120 HOH HOH A . G 6 HOH 45 545 104 HOH HOH A . G 6 HOH 46 546 111 HOH HOH A . G 6 HOH 47 547 113 HOH HOH A . G 6 HOH 48 548 20 HOH HOH A . G 6 HOH 49 549 49 HOH HOH A . G 6 HOH 50 550 103 HOH HOH A . G 6 HOH 51 551 23 HOH HOH A . G 6 HOH 52 552 85 HOH HOH A . G 6 HOH 53 553 68 HOH HOH A . G 6 HOH 54 554 110 HOH HOH A . G 6 HOH 55 555 37 HOH HOH A . G 6 HOH 56 556 22 HOH HOH A . G 6 HOH 57 557 26 HOH HOH A . G 6 HOH 58 558 56 HOH HOH A . G 6 HOH 59 559 21 HOH HOH A . G 6 HOH 60 560 10 HOH HOH A . G 6 HOH 61 561 12 HOH HOH A . G 6 HOH 62 562 18 HOH HOH A . G 6 HOH 63 563 5 HOH HOH A . G 6 HOH 64 564 46 HOH HOH A . G 6 HOH 65 565 51 HOH HOH A . G 6 HOH 66 566 121 HOH HOH A . G 6 HOH 67 567 63 HOH HOH A . G 6 HOH 68 568 90 HOH HOH A . G 6 HOH 69 569 43 HOH HOH A . G 6 HOH 70 570 14 HOH HOH A . G 6 HOH 71 571 95 HOH HOH A . G 6 HOH 72 572 75 HOH HOH A . G 6 HOH 73 573 77 HOH HOH A . G 6 HOH 74 574 94 HOH HOH A . G 6 HOH 75 575 114 HOH HOH A . G 6 HOH 76 576 67 HOH HOH A . G 6 HOH 77 577 60 HOH HOH A . G 6 HOH 78 578 96 HOH HOH A . G 6 HOH 79 579 34 HOH HOH A . G 6 HOH 80 580 92 HOH HOH A . G 6 HOH 81 581 32 HOH HOH A . G 6 HOH 82 582 117 HOH HOH A . G 6 HOH 83 583 39 HOH HOH A . G 6 HOH 84 584 59 HOH HOH A . G 6 HOH 85 585 35 HOH HOH A . G 6 HOH 86 586 73 HOH HOH A . G 6 HOH 87 587 52 HOH HOH A . G 6 HOH 88 588 93 HOH HOH A . G 6 HOH 89 589 106 HOH HOH A . G 6 HOH 90 590 112 HOH HOH A . G 6 HOH 91 591 108 HOH HOH A . G 6 HOH 92 592 24 HOH HOH A . G 6 HOH 93 593 66 HOH HOH A . G 6 HOH 94 594 97 HOH HOH A . G 6 HOH 95 595 116 HOH HOH A . H 6 HOH 1 201 109 HOH HOH B . H 6 HOH 2 202 44 HOH HOH B . H 6 HOH 3 203 70 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4200 ? 1 MORE -30 ? 1 'SSA (A^2)' 17710 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 595 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id G _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A LEU 14 ? A LEU 22 ? 1_555 MG ? D MG . ? A MG 401 ? 1_555 O ? A SER 78 ? A SER 86 ? 1_555 107.3 ? 2 O ? A CYS 233 ? A CYS 241 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? A LEU 235 ? A LEU 243 ? 1_555 101.1 ? 3 O ? A CYS 233 ? A CYS 241 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? A VAL 238 ? A VAL 246 ? 1_555 85.9 ? 4 O ? A LEU 235 ? A LEU 243 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? A VAL 238 ? A VAL 246 ? 1_555 89.5 ? 5 O ? A CYS 233 ? A CYS 241 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? G HOH . ? A HOH 581 ? 1_555 78.6 ? 6 O ? A LEU 235 ? A LEU 243 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? G HOH . ? A HOH 581 ? 1_555 97.9 ? 7 O ? A VAL 238 ? A VAL 246 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 O ? G HOH . ? A HOH 581 ? 1_555 163.8 ? 8 O ? A CYS 233 ? A CYS 241 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 OP1 ? B DC 10 ? B DC 28 ? 1_555 166.9 ? 9 O ? A LEU 235 ? A LEU 243 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 OP1 ? B DC 10 ? B DC 28 ? 1_555 76.5 ? 10 O ? A VAL 238 ? A VAL 246 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 OP1 ? B DC 10 ? B DC 28 ? 1_555 106.8 ? 11 O ? G HOH . ? A HOH 581 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 OP1 ? B DC 10 ? B DC 28 ? 1_555 88.9 ? 12 O ? A CYS 233 ? A CYS 241 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 OP2 ? B DC 10 ? B DC 28 ? 1_555 125.4 ? 13 O ? A LEU 235 ? A LEU 243 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 OP2 ? B DC 10 ? B DC 28 ? 1_555 133.3 ? 14 O ? A VAL 238 ? A VAL 246 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 OP2 ? B DC 10 ? B DC 28 ? 1_555 89.4 ? 15 O ? G HOH . ? A HOH 581 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 OP2 ? B DC 10 ? B DC 28 ? 1_555 95.8 ? 16 OP1 ? B DC 10 ? B DC 28 ? 1_555 MG ? E MG . ? A MG 402 ? 1_555 OP2 ? B DC 10 ? B DC 28 ? 1_555 59.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-09-23 2 'Structure model' 1 1 2023-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Database references' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' pdbx_unobs_or_zero_occ_atoms # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.6.0117 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 5 ? 'data processing' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 6 # _pdbx_entry_details.entry_id 6W0M _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N2 B DG 26 ? ? C A S5Y 403 ? ? 1.45 2 1 SG A CYS 207 ? ? S A S5Y 403 ? ? 2.05 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" B DC 19 ? ? "O3'" B DC 19 ? ? P B DG 20 ? ? 128.15 119.70 8.45 1.20 Y 2 1 "C3'" B DG 20 ? ? "O3'" B DG 20 ? ? P B DT 21 ? ? 131.20 119.70 11.50 1.20 Y 3 1 "O3'" B DT 27 ? ? P B DC 28 ? ? "O5'" B DC 28 ? ? 89.37 104.00 -14.63 1.90 Y 4 1 "C3'" C DG 2 ? ? "O3'" C DG 2 ? ? P C DG 3 ? ? 131.29 119.70 11.59 1.20 Y 5 1 "C3'" C DG 3 ? ? "O3'" C DG 3 ? ? P C DT 4 ? ? 131.91 119.70 12.21 1.20 Y 6 1 "C3'" C DG 15 ? ? "O3'" C DG 15 ? ? P C DC 16 ? ? 128.10 119.70 8.40 1.20 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 28 ? ? -176.20 107.01 2 1 LEU A 33 ? ? -167.74 118.33 3 1 GLN A 43 ? ? -94.97 -63.59 4 1 LEU A 170 ? ? -96.42 -76.22 5 1 ASP A 174 ? ? 51.98 -128.52 6 1 ALA A 258 ? ? -131.97 -32.23 7 1 ASP A 268 ? ? -115.47 -168.56 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A GLN 84 ? CD ? A GLN 76 CD 2 1 Y 0 A GLN 84 ? OE1 ? A GLN 76 OE1 3 1 Y 0 A GLN 84 ? NE2 ? A GLN 76 NE2 4 1 Y 0 A ARG 87 ? CD ? A ARG 79 CD 5 1 Y 0 A ARG 87 ? NE ? A ARG 79 NE 6 1 Y 0 A ARG 87 ? CZ ? A ARG 79 CZ 7 1 Y 0 A ARG 87 ? NH1 ? A ARG 79 NH1 8 1 Y 0 A ARG 87 ? NH2 ? A ARG 79 NH2 9 1 Y 0 A LYS 98 ? CD ? A LYS 90 CD 10 1 Y 0 A LYS 98 ? CE ? A LYS 90 CE 11 1 Y 0 A LYS 98 ? NZ ? A LYS 90 NZ 12 1 Y 0 A GLN 125 ? CD ? A GLN 117 CD 13 1 Y 0 A GLN 125 ? OE1 ? A GLN 117 OE1 14 1 Y 0 A GLN 125 ? NE2 ? A GLN 117 NE2 15 1 Y 0 A LYS 126 ? CG ? A LYS 118 CG 16 1 Y 0 A LYS 126 ? CD ? A LYS 118 CD 17 1 Y 0 A LYS 126 ? CE ? A LYS 118 CE 18 1 Y 0 A LYS 126 ? NZ ? A LYS 118 NZ 19 1 Y 0 A ARG 206 ? CZ ? A ARG 198 CZ 20 1 Y 0 A ARG 206 ? NH1 ? A ARG 198 NH1 21 1 Y 0 A ARG 206 ? NH2 ? A ARG 198 NH2 22 1 Y 0 A LYS 238 ? CD ? A LYS 230 CD 23 1 Y 0 A LYS 238 ? CE ? A LYS 230 CE 24 1 Y 0 A LYS 238 ? NZ ? A LYS 230 NZ 25 1 Y 0 A GLN 287 ? CD ? A GLN 279 CD 26 1 Y 0 A GLN 287 ? OE1 ? A GLN 279 OE1 27 1 Y 0 A GLN 287 ? NE2 ? A GLN 279 NE2 28 1 Y 0 A LYS 289 ? CG ? A LYS 281 CG 29 1 Y 0 A LYS 289 ? CD ? A LYS 281 CD 30 1 Y 0 A LYS 289 ? CE ? A LYS 281 CE 31 1 Y 0 A LYS 289 ? NZ ? A LYS 281 NZ 32 1 Y 0 A GLN 294 ? CD ? A GLN 286 CD 33 1 Y 0 A GLN 294 ? OE1 ? A GLN 286 OE1 34 1 Y 0 A GLN 294 ? NE2 ? A GLN 286 NE2 35 1 Y 0 A LYS 297 ? CE ? A LYS 289 CE 36 1 Y 0 A LYS 297 ? NZ ? A LYS 289 NZ 37 1 Y 0 C DG 2 ? P ? C DG 1 P 38 1 Y 0 C DG 2 ? OP1 ? C DG 1 OP1 39 1 Y 0 C DG 2 ? OP2 ? C DG 1 OP2 40 1 Y 0 C DG 2 ? "O5'" ? C DG 1 "O5'" 41 1 Y 0 C DG 2 ? "C5'" ? C DG 1 "C5'" # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 80 ? A GLY 72 2 1 Y 1 A ASP 81 ? A ASP 73 3 1 Y 1 A LYS 82 ? A LYS 74 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8OG OP3 O N N 1 8OG P P N N 2 8OG OP1 O N N 3 8OG OP2 O N N 4 8OG "O5'" O N N 5 8OG "C5'" C N N 6 8OG "C4'" C N R 7 8OG "O4'" O N N 8 8OG "C3'" C N S 9 8OG "O3'" O N N 10 8OG "C2'" C N N 11 8OG "C1'" C N R 12 8OG N9 N N N 13 8OG C8 C N N 14 8OG N7 N N N 15 8OG C5 C N N 16 8OG C6 C N N 17 8OG O6 O N N 18 8OG N1 N N N 19 8OG C2 C N N 20 8OG N2 N N N 21 8OG N3 N N N 22 8OG C4 C N N 23 8OG O8 O N N 24 8OG HOP3 H N N 25 8OG HOP2 H N N 26 8OG "H5'" H N N 27 8OG "H5''" H N N 28 8OG "H4'" H N N 29 8OG "H3'" H N N 30 8OG "HO3'" H N N 31 8OG "H2'" H N N 32 8OG "H2''" H N N 33 8OG "H1'" H N N 34 8OG H7 H N N 35 8OG H1 H N N 36 8OG H21 H N N 37 8OG H22 H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 CYS N N N N 112 CYS CA C N R 113 CYS C C N N 114 CYS O O N N 115 CYS CB C N N 116 CYS SG S N N 117 CYS OXT O N N 118 CYS H H N N 119 CYS H2 H N N 120 CYS HA H N N 121 CYS HB2 H N N 122 CYS HB3 H N N 123 CYS HG H N N 124 CYS HXT H N N 125 DA OP3 O N N 126 DA P P N N 127 DA OP1 O N N 128 DA OP2 O N N 129 DA "O5'" O N N 130 DA "C5'" C N N 131 DA "C4'" C N R 132 DA "O4'" O N N 133 DA "C3'" C N S 134 DA "O3'" O N N 135 DA "C2'" C N N 136 DA "C1'" C N R 137 DA N9 N Y N 138 DA C8 C Y N 139 DA N7 N Y N 140 DA C5 C Y N 141 DA C6 C Y N 142 DA N6 N N N 143 DA N1 N Y N 144 DA C2 C Y N 145 DA N3 N Y N 146 DA C4 C Y N 147 DA HOP3 H N N 148 DA HOP2 H N N 149 DA "H5'" H N N 150 DA "H5''" H N N 151 DA "H4'" H N N 152 DA "H3'" H N N 153 DA "HO3'" H N N 154 DA "H2'" H N N 155 DA "H2''" H N N 156 DA "H1'" H N N 157 DA H8 H N N 158 DA H61 H N N 159 DA H62 H N N 160 DA H2 H N N 161 DC OP3 O N N 162 DC P P N N 163 DC OP1 O N N 164 DC OP2 O N N 165 DC "O5'" O N N 166 DC "C5'" C N N 167 DC "C4'" C N R 168 DC "O4'" O N N 169 DC "C3'" C N S 170 DC "O3'" O N N 171 DC "C2'" C N N 172 DC "C1'" C N R 173 DC N1 N N N 174 DC C2 C N N 175 DC O2 O N N 176 DC N3 N N N 177 DC C4 C N N 178 DC N4 N N N 179 DC C5 C N N 180 DC C6 C N N 181 DC HOP3 H N N 182 DC HOP2 H N N 183 DC "H5'" H N N 184 DC "H5''" H N N 185 DC "H4'" H N N 186 DC "H3'" H N N 187 DC "HO3'" H N N 188 DC "H2'" H N N 189 DC "H2''" H N N 190 DC "H1'" H N N 191 DC H41 H N N 192 DC H42 H N N 193 DC H5 H N N 194 DC H6 H N N 195 DG OP3 O N N 196 DG P P N N 197 DG OP1 O N N 198 DG OP2 O N N 199 DG "O5'" O N N 200 DG "C5'" C N N 201 DG "C4'" C N R 202 DG "O4'" O N N 203 DG "C3'" C N S 204 DG "O3'" O N N 205 DG "C2'" C N N 206 DG "C1'" C N R 207 DG N9 N Y N 208 DG C8 C Y N 209 DG N7 N Y N 210 DG C5 C Y N 211 DG C6 C N N 212 DG O6 O N N 213 DG N1 N N N 214 DG C2 C N N 215 DG N2 N N N 216 DG N3 N N N 217 DG C4 C Y N 218 DG HOP3 H N N 219 DG HOP2 H N N 220 DG "H5'" H N N 221 DG "H5''" H N N 222 DG "H4'" H N N 223 DG "H3'" H N N 224 DG "HO3'" H N N 225 DG "H2'" H N N 226 DG "H2''" H N N 227 DG "H1'" H N N 228 DG H8 H N N 229 DG H1 H N N 230 DG H21 H N N 231 DG H22 H N N 232 DT OP3 O N N 233 DT P P N N 234 DT OP1 O N N 235 DT OP2 O N N 236 DT "O5'" O N N 237 DT "C5'" C N N 238 DT "C4'" C N R 239 DT "O4'" O N N 240 DT "C3'" C N S 241 DT "O3'" O N N 242 DT "C2'" C N N 243 DT "C1'" C N R 244 DT N1 N N N 245 DT C2 C N N 246 DT O2 O N N 247 DT N3 N N N 248 DT C4 C N N 249 DT O4 O N N 250 DT C5 C N N 251 DT C7 C N N 252 DT C6 C N N 253 DT HOP3 H N N 254 DT HOP2 H N N 255 DT "H5'" H N N 256 DT "H5''" H N N 257 DT "H4'" H N N 258 DT "H3'" H N N 259 DT "HO3'" H N N 260 DT "H2'" H N N 261 DT "H2''" H N N 262 DT "H1'" H N N 263 DT H3 H N N 264 DT H71 H N N 265 DT H72 H N N 266 DT H73 H N N 267 DT H6 H N N 268 GLN N N N N 269 GLN CA C N S 270 GLN C C N N 271 GLN O O N N 272 GLN CB C N N 273 GLN CG C N N 274 GLN CD C N N 275 GLN OE1 O N N 276 GLN NE2 N N N 277 GLN OXT O N N 278 GLN H H N N 279 GLN H2 H N N 280 GLN HA H N N 281 GLN HB2 H N N 282 GLN HB3 H N N 283 GLN HG2 H N N 284 GLN HG3 H N N 285 GLN HE21 H N N 286 GLN HE22 H N N 287 GLN HXT H N N 288 GLU N N N N 289 GLU CA C N S 290 GLU C C N N 291 GLU O O N N 292 GLU CB C N N 293 GLU CG C N N 294 GLU CD C N N 295 GLU OE1 O N N 296 GLU OE2 O N N 297 GLU OXT O N N 298 GLU H H N N 299 GLU H2 H N N 300 GLU HA H N N 301 GLU HB2 H N N 302 GLU HB3 H N N 303 GLU HG2 H N N 304 GLU HG3 H N N 305 GLU HE2 H N N 306 GLU HXT H N N 307 GLY N N N N 308 GLY CA C N N 309 GLY C C N N 310 GLY O O N N 311 GLY OXT O N N 312 GLY H H N N 313 GLY H2 H N N 314 GLY HA2 H N N 315 GLY HA3 H N N 316 GLY HXT H N N 317 HIS N N N N 318 HIS CA C N S 319 HIS C C N N 320 HIS O O N N 321 HIS CB C N N 322 HIS CG C Y N 323 HIS ND1 N Y N 324 HIS CD2 C Y N 325 HIS CE1 C Y N 326 HIS NE2 N Y N 327 HIS OXT O N N 328 HIS H H N N 329 HIS H2 H N N 330 HIS HA H N N 331 HIS HB2 H N N 332 HIS HB3 H N N 333 HIS HD1 H N N 334 HIS HD2 H N N 335 HIS HE1 H N N 336 HIS HE2 H N N 337 HIS HXT H N N 338 HOH O O N N 339 HOH H1 H N N 340 HOH H2 H N N 341 ILE N N N N 342 ILE CA C N S 343 ILE C C N N 344 ILE O O N N 345 ILE CB C N S 346 ILE CG1 C N N 347 ILE CG2 C N N 348 ILE CD1 C N N 349 ILE OXT O N N 350 ILE H H N N 351 ILE H2 H N N 352 ILE HA H N N 353 ILE HB H N N 354 ILE HG12 H N N 355 ILE HG13 H N N 356 ILE HG21 H N N 357 ILE HG22 H N N 358 ILE HG23 H N N 359 ILE HD11 H N N 360 ILE HD12 H N N 361 ILE HD13 H N N 362 ILE HXT H N N 363 LEU N N N N 364 LEU CA C N S 365 LEU C C N N 366 LEU O O N N 367 LEU CB C N N 368 LEU CG C N N 369 LEU CD1 C N N 370 LEU CD2 C N N 371 LEU OXT O N N 372 LEU H H N N 373 LEU H2 H N N 374 LEU HA H N N 375 LEU HB2 H N N 376 LEU HB3 H N N 377 LEU HG H N N 378 LEU HD11 H N N 379 LEU HD12 H N N 380 LEU HD13 H N N 381 LEU HD21 H N N 382 LEU HD22 H N N 383 LEU HD23 H N N 384 LEU HXT H N N 385 LYS N N N N 386 LYS CA C N S 387 LYS C C N N 388 LYS O O N N 389 LYS CB C N N 390 LYS CG C N N 391 LYS CD C N N 392 LYS CE C N N 393 LYS NZ N N N 394 LYS OXT O N N 395 LYS H H N N 396 LYS H2 H N N 397 LYS HA H N N 398 LYS HB2 H N N 399 LYS HB3 H N N 400 LYS HG2 H N N 401 LYS HG3 H N N 402 LYS HD2 H N N 403 LYS HD3 H N N 404 LYS HE2 H N N 405 LYS HE3 H N N 406 LYS HZ1 H N N 407 LYS HZ2 H N N 408 LYS HZ3 H N N 409 LYS HXT H N N 410 MET N N N N 411 MET CA C N S 412 MET C C N N 413 MET O O N N 414 MET CB C N N 415 MET CG C N N 416 MET SD S N N 417 MET CE C N N 418 MET OXT O N N 419 MET H H N N 420 MET H2 H N N 421 MET HA H N N 422 MET HB2 H N N 423 MET HB3 H N N 424 MET HG2 H N N 425 MET HG3 H N N 426 MET HE1 H N N 427 MET HE2 H N N 428 MET HE3 H N N 429 MET HXT H N N 430 MG MG MG N N 431 PHE N N N N 432 PHE CA C N S 433 PHE C C N N 434 PHE O O N N 435 PHE CB C N N 436 PHE CG C Y N 437 PHE CD1 C Y N 438 PHE CD2 C Y N 439 PHE CE1 C Y N 440 PHE CE2 C Y N 441 PHE CZ C Y N 442 PHE OXT O N N 443 PHE H H N N 444 PHE H2 H N N 445 PHE HA H N N 446 PHE HB2 H N N 447 PHE HB3 H N N 448 PHE HD1 H N N 449 PHE HD2 H N N 450 PHE HE1 H N N 451 PHE HE2 H N N 452 PHE HZ H N N 453 PHE HXT H N N 454 PRO N N N N 455 PRO CA C N S 456 PRO C C N N 457 PRO O O N N 458 PRO CB C N N 459 PRO CG C N N 460 PRO CD C N N 461 PRO OXT O N N 462 PRO H H N N 463 PRO HA H N N 464 PRO HB2 H N N 465 PRO HB3 H N N 466 PRO HG2 H N N 467 PRO HG3 H N N 468 PRO HD2 H N N 469 PRO HD3 H N N 470 PRO HXT H N N 471 S5Y C1 C N N 472 S5Y C2 C N N 473 S5Y C3 C N N 474 S5Y C4 C N N 475 S5Y C5 C N N 476 S5Y S S N N 477 S5Y O1 O N N 478 S5Y O O N N 479 S5Y C C N N 480 S5Y H1 H N N 481 S5Y H2 H N N 482 S5Y H3 H N N 483 S5Y H4 H N N 484 S5Y H5 H N N 485 S5Y H6 H N N 486 S5Y H7 H N N 487 S5Y H8 H N N 488 S5Y H9 H N N 489 S5Y H10 H N N 490 S5Y H11 H N N 491 S5Y H12 H N N 492 S5Y H13 H N N 493 S5Y H14 H N N 494 SER N N N N 495 SER CA C N S 496 SER C C N N 497 SER O O N N 498 SER CB C N N 499 SER OG O N N 500 SER OXT O N N 501 SER H H N N 502 SER H2 H N N 503 SER HA H N N 504 SER HB2 H N N 505 SER HB3 H N N 506 SER HG H N N 507 SER HXT H N N 508 THR N N N N 509 THR CA C N S 510 THR C C N N 511 THR O O N N 512 THR CB C N R 513 THR OG1 O N N 514 THR CG2 C N N 515 THR OXT O N N 516 THR H H N N 517 THR H2 H N N 518 THR HA H N N 519 THR HB H N N 520 THR HG1 H N N 521 THR HG21 H N N 522 THR HG22 H N N 523 THR HG23 H N N 524 THR HXT H N N 525 TRP N N N N 526 TRP CA C N S 527 TRP C C N N 528 TRP O O N N 529 TRP CB C N N 530 TRP CG C Y N 531 TRP CD1 C Y N 532 TRP CD2 C Y N 533 TRP NE1 N Y N 534 TRP CE2 C Y N 535 TRP CE3 C Y N 536 TRP CZ2 C Y N 537 TRP CZ3 C Y N 538 TRP CH2 C Y N 539 TRP OXT O N N 540 TRP H H N N 541 TRP H2 H N N 542 TRP HA H N N 543 TRP HB2 H N N 544 TRP HB3 H N N 545 TRP HD1 H N N 546 TRP HE1 H N N 547 TRP HE3 H N N 548 TRP HZ2 H N N 549 TRP HZ3 H N N 550 TRP HH2 H N N 551 TRP HXT H N N 552 TYR N N N N 553 TYR CA C N S 554 TYR C C N N 555 TYR O O N N 556 TYR CB C N N 557 TYR CG C Y N 558 TYR CD1 C Y N 559 TYR CD2 C Y N 560 TYR CE1 C Y N 561 TYR CE2 C Y N 562 TYR CZ C Y N 563 TYR OH O N N 564 TYR OXT O N N 565 TYR H H N N 566 TYR H2 H N N 567 TYR HA H N N 568 TYR HB2 H N N 569 TYR HB3 H N N 570 TYR HD1 H N N 571 TYR HD2 H N N 572 TYR HE1 H N N 573 TYR HE2 H N N 574 TYR HH H N N 575 TYR HXT H N N 576 VAL N N N N 577 VAL CA C N S 578 VAL C C N N 579 VAL O O N N 580 VAL CB C N N 581 VAL CG1 C N N 582 VAL CG2 C N N 583 VAL OXT O N N 584 VAL H H N N 585 VAL H2 H N N 586 VAL HA H N N 587 VAL HB H N N 588 VAL HG11 H N N 589 VAL HG12 H N N 590 VAL HG13 H N N 591 VAL HG21 H N N 592 VAL HG22 H N N 593 VAL HG23 H N N 594 VAL HXT H N N 595 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8OG OP3 P sing N N 1 8OG OP3 HOP3 sing N N 2 8OG P OP1 doub N N 3 8OG P OP2 sing N N 4 8OG P "O5'" sing N N 5 8OG OP2 HOP2 sing N N 6 8OG "O5'" "C5'" sing N N 7 8OG "C5'" "C4'" sing N N 8 8OG "C5'" "H5'" sing N N 9 8OG "C5'" "H5''" sing N N 10 8OG "C4'" "O4'" sing N N 11 8OG "C4'" "C3'" sing N N 12 8OG "C4'" "H4'" sing N N 13 8OG "O4'" "C1'" sing N N 14 8OG "C3'" "O3'" sing N N 15 8OG "C3'" "C2'" sing N N 16 8OG "C3'" "H3'" sing N N 17 8OG "O3'" "HO3'" sing N N 18 8OG "C2'" "C1'" sing N N 19 8OG "C2'" "H2'" sing N N 20 8OG "C2'" "H2''" sing N N 21 8OG "C1'" N9 sing N N 22 8OG "C1'" "H1'" sing N N 23 8OG N9 C8 sing N N 24 8OG N9 C4 sing N N 25 8OG C8 N7 sing N N 26 8OG C8 O8 doub N N 27 8OG N7 C5 sing N N 28 8OG N7 H7 sing N N 29 8OG C5 C6 sing N N 30 8OG C5 C4 doub N N 31 8OG C6 O6 doub N N 32 8OG C6 N1 sing N N 33 8OG N1 C2 sing N N 34 8OG N1 H1 sing N N 35 8OG C2 N2 sing N N 36 8OG C2 N3 doub N N 37 8OG N2 H21 sing N N 38 8OG N2 H22 sing N N 39 8OG N3 C4 sing N N 40 ALA N CA sing N N 41 ALA N H sing N N 42 ALA N H2 sing N N 43 ALA CA C sing N N 44 ALA CA CB sing N N 45 ALA CA HA sing N N 46 ALA C O doub N N 47 ALA C OXT sing N N 48 ALA CB HB1 sing N N 49 ALA CB HB2 sing N N 50 ALA CB HB3 sing N N 51 ALA OXT HXT sing N N 52 ARG N CA sing N N 53 ARG N H sing N N 54 ARG N H2 sing N N 55 ARG CA C sing N N 56 ARG CA CB sing N N 57 ARG CA HA sing N N 58 ARG C O doub N N 59 ARG C OXT sing N N 60 ARG CB CG sing N N 61 ARG CB HB2 sing N N 62 ARG CB HB3 sing N N 63 ARG CG CD sing N N 64 ARG CG HG2 sing N N 65 ARG CG HG3 sing N N 66 ARG CD NE sing N N 67 ARG CD HD2 sing N N 68 ARG CD HD3 sing N N 69 ARG NE CZ sing N N 70 ARG NE HE sing N N 71 ARG CZ NH1 sing N N 72 ARG CZ NH2 doub N N 73 ARG NH1 HH11 sing N N 74 ARG NH1 HH12 sing N N 75 ARG NH2 HH21 sing N N 76 ARG NH2 HH22 sing N N 77 ARG OXT HXT sing N N 78 ASN N CA sing N N 79 ASN N H sing N N 80 ASN N H2 sing N N 81 ASN CA C sing N N 82 ASN CA CB sing N N 83 ASN CA HA sing N N 84 ASN C O doub N N 85 ASN C OXT sing N N 86 ASN CB CG sing N N 87 ASN CB HB2 sing N N 88 ASN CB HB3 sing N N 89 ASN CG OD1 doub N N 90 ASN CG ND2 sing N N 91 ASN ND2 HD21 sing N N 92 ASN ND2 HD22 sing N N 93 ASN OXT HXT sing N N 94 ASP N CA sing N N 95 ASP N H sing N N 96 ASP N H2 sing N N 97 ASP CA C sing N N 98 ASP CA CB sing N N 99 ASP CA HA sing N N 100 ASP C O doub N N 101 ASP C OXT sing N N 102 ASP CB CG sing N N 103 ASP CB HB2 sing N N 104 ASP CB HB3 sing N N 105 ASP CG OD1 doub N N 106 ASP CG OD2 sing N N 107 ASP OD2 HD2 sing N N 108 ASP OXT HXT sing N N 109 CYS N CA sing N N 110 CYS N H sing N N 111 CYS N H2 sing N N 112 CYS CA C sing N N 113 CYS CA CB sing N N 114 CYS CA HA sing N N 115 CYS C O doub N N 116 CYS C OXT sing N N 117 CYS CB SG sing N N 118 CYS CB HB2 sing N N 119 CYS CB HB3 sing N N 120 CYS SG HG sing N N 121 CYS OXT HXT sing N N 122 DA OP3 P sing N N 123 DA OP3 HOP3 sing N N 124 DA P OP1 doub N N 125 DA P OP2 sing N N 126 DA P "O5'" sing N N 127 DA OP2 HOP2 sing N N 128 DA "O5'" "C5'" sing N N 129 DA "C5'" "C4'" sing N N 130 DA "C5'" "H5'" sing N N 131 DA "C5'" "H5''" sing N N 132 DA "C4'" "O4'" sing N N 133 DA "C4'" "C3'" sing N N 134 DA "C4'" "H4'" sing N N 135 DA "O4'" "C1'" sing N N 136 DA "C3'" "O3'" sing N N 137 DA "C3'" "C2'" sing N N 138 DA "C3'" "H3'" sing N N 139 DA "O3'" "HO3'" sing N N 140 DA "C2'" "C1'" sing N N 141 DA "C2'" "H2'" sing N N 142 DA "C2'" "H2''" sing N N 143 DA "C1'" N9 sing N N 144 DA "C1'" "H1'" sing N N 145 DA N9 C8 sing Y N 146 DA N9 C4 sing Y N 147 DA C8 N7 doub Y N 148 DA C8 H8 sing N N 149 DA N7 C5 sing Y N 150 DA C5 C6 sing Y N 151 DA C5 C4 doub Y N 152 DA C6 N6 sing N N 153 DA C6 N1 doub Y N 154 DA N6 H61 sing N N 155 DA N6 H62 sing N N 156 DA N1 C2 sing Y N 157 DA C2 N3 doub Y N 158 DA C2 H2 sing N N 159 DA N3 C4 sing Y N 160 DC OP3 P sing N N 161 DC OP3 HOP3 sing N N 162 DC P OP1 doub N N 163 DC P OP2 sing N N 164 DC P "O5'" sing N N 165 DC OP2 HOP2 sing N N 166 DC "O5'" "C5'" sing N N 167 DC "C5'" "C4'" sing N N 168 DC "C5'" "H5'" sing N N 169 DC "C5'" "H5''" sing N N 170 DC "C4'" "O4'" sing N N 171 DC "C4'" "C3'" sing N N 172 DC "C4'" "H4'" sing N N 173 DC "O4'" "C1'" sing N N 174 DC "C3'" "O3'" sing N N 175 DC "C3'" "C2'" sing N N 176 DC "C3'" "H3'" sing N N 177 DC "O3'" "HO3'" sing N N 178 DC "C2'" "C1'" sing N N 179 DC "C2'" "H2'" sing N N 180 DC "C2'" "H2''" sing N N 181 DC "C1'" N1 sing N N 182 DC "C1'" "H1'" sing N N 183 DC N1 C2 sing N N 184 DC N1 C6 sing N N 185 DC C2 O2 doub N N 186 DC C2 N3 sing N N 187 DC N3 C4 doub N N 188 DC C4 N4 sing N N 189 DC C4 C5 sing N N 190 DC N4 H41 sing N N 191 DC N4 H42 sing N N 192 DC C5 C6 doub N N 193 DC C5 H5 sing N N 194 DC C6 H6 sing N N 195 DG OP3 P sing N N 196 DG OP3 HOP3 sing N N 197 DG P OP1 doub N N 198 DG P OP2 sing N N 199 DG P "O5'" sing N N 200 DG OP2 HOP2 sing N N 201 DG "O5'" "C5'" sing N N 202 DG "C5'" "C4'" sing N N 203 DG "C5'" "H5'" sing N N 204 DG "C5'" "H5''" sing N N 205 DG "C4'" "O4'" sing N N 206 DG "C4'" "C3'" sing N N 207 DG "C4'" "H4'" sing N N 208 DG "O4'" "C1'" sing N N 209 DG "C3'" "O3'" sing N N 210 DG "C3'" "C2'" sing N N 211 DG "C3'" "H3'" sing N N 212 DG "O3'" "HO3'" sing N N 213 DG "C2'" "C1'" sing N N 214 DG "C2'" "H2'" sing N N 215 DG "C2'" "H2''" sing N N 216 DG "C1'" N9 sing N N 217 DG "C1'" "H1'" sing N N 218 DG N9 C8 sing Y N 219 DG N9 C4 sing Y N 220 DG C8 N7 doub Y N 221 DG C8 H8 sing N N 222 DG N7 C5 sing Y N 223 DG C5 C6 sing N N 224 DG C5 C4 doub Y N 225 DG C6 O6 doub N N 226 DG C6 N1 sing N N 227 DG N1 C2 sing N N 228 DG N1 H1 sing N N 229 DG C2 N2 sing N N 230 DG C2 N3 doub N N 231 DG N2 H21 sing N N 232 DG N2 H22 sing N N 233 DG N3 C4 sing N N 234 DT OP3 P sing N N 235 DT OP3 HOP3 sing N N 236 DT P OP1 doub N N 237 DT P OP2 sing N N 238 DT P "O5'" sing N N 239 DT OP2 HOP2 sing N N 240 DT "O5'" "C5'" sing N N 241 DT "C5'" "C4'" sing N N 242 DT "C5'" "H5'" sing N N 243 DT "C5'" "H5''" sing N N 244 DT "C4'" "O4'" sing N N 245 DT "C4'" "C3'" sing N N 246 DT "C4'" "H4'" sing N N 247 DT "O4'" "C1'" sing N N 248 DT "C3'" "O3'" sing N N 249 DT "C3'" "C2'" sing N N 250 DT "C3'" "H3'" sing N N 251 DT "O3'" "HO3'" sing N N 252 DT "C2'" "C1'" sing N N 253 DT "C2'" "H2'" sing N N 254 DT "C2'" "H2''" sing N N 255 DT "C1'" N1 sing N N 256 DT "C1'" "H1'" sing N N 257 DT N1 C2 sing N N 258 DT N1 C6 sing N N 259 DT C2 O2 doub N N 260 DT C2 N3 sing N N 261 DT N3 C4 sing N N 262 DT N3 H3 sing N N 263 DT C4 O4 doub N N 264 DT C4 C5 sing N N 265 DT C5 C7 sing N N 266 DT C5 C6 doub N N 267 DT C7 H71 sing N N 268 DT C7 H72 sing N N 269 DT C7 H73 sing N N 270 DT C6 H6 sing N N 271 GLN N CA sing N N 272 GLN N H sing N N 273 GLN N H2 sing N N 274 GLN CA C sing N N 275 GLN CA CB sing N N 276 GLN CA HA sing N N 277 GLN C O doub N N 278 GLN C OXT sing N N 279 GLN CB CG sing N N 280 GLN CB HB2 sing N N 281 GLN CB HB3 sing N N 282 GLN CG CD sing N N 283 GLN CG HG2 sing N N 284 GLN CG HG3 sing N N 285 GLN CD OE1 doub N N 286 GLN CD NE2 sing N N 287 GLN NE2 HE21 sing N N 288 GLN NE2 HE22 sing N N 289 GLN OXT HXT sing N N 290 GLU N CA sing N N 291 GLU N H sing N N 292 GLU N H2 sing N N 293 GLU CA C sing N N 294 GLU CA CB sing N N 295 GLU CA HA sing N N 296 GLU C O doub N N 297 GLU C OXT sing N N 298 GLU CB CG sing N N 299 GLU CB HB2 sing N N 300 GLU CB HB3 sing N N 301 GLU CG CD sing N N 302 GLU CG HG2 sing N N 303 GLU CG HG3 sing N N 304 GLU CD OE1 doub N N 305 GLU CD OE2 sing N N 306 GLU OE2 HE2 sing N N 307 GLU OXT HXT sing N N 308 GLY N CA sing N N 309 GLY N H sing N N 310 GLY N H2 sing N N 311 GLY CA C sing N N 312 GLY CA HA2 sing N N 313 GLY CA HA3 sing N N 314 GLY C O doub N N 315 GLY C OXT sing N N 316 GLY OXT HXT sing N N 317 HIS N CA sing N N 318 HIS N H sing N N 319 HIS N H2 sing N N 320 HIS CA C sing N N 321 HIS CA CB sing N N 322 HIS CA HA sing N N 323 HIS C O doub N N 324 HIS C OXT sing N N 325 HIS CB CG sing N N 326 HIS CB HB2 sing N N 327 HIS CB HB3 sing N N 328 HIS CG ND1 sing Y N 329 HIS CG CD2 doub Y N 330 HIS ND1 CE1 doub Y N 331 HIS ND1 HD1 sing N N 332 HIS CD2 NE2 sing Y N 333 HIS CD2 HD2 sing N N 334 HIS CE1 NE2 sing Y N 335 HIS CE1 HE1 sing N N 336 HIS NE2 HE2 sing N N 337 HIS OXT HXT sing N N 338 HOH O H1 sing N N 339 HOH O H2 sing N N 340 ILE N CA sing N N 341 ILE N H sing N N 342 ILE N H2 sing N N 343 ILE CA C sing N N 344 ILE CA CB sing N N 345 ILE CA HA sing N N 346 ILE C O doub N N 347 ILE C OXT sing N N 348 ILE CB CG1 sing N N 349 ILE CB CG2 sing N N 350 ILE CB HB sing N N 351 ILE CG1 CD1 sing N N 352 ILE CG1 HG12 sing N N 353 ILE CG1 HG13 sing N N 354 ILE CG2 HG21 sing N N 355 ILE CG2 HG22 sing N N 356 ILE CG2 HG23 sing N N 357 ILE CD1 HD11 sing N N 358 ILE CD1 HD12 sing N N 359 ILE CD1 HD13 sing N N 360 ILE OXT HXT sing N N 361 LEU N CA sing N N 362 LEU N H sing N N 363 LEU N H2 sing N N 364 LEU CA C sing N N 365 LEU CA CB sing N N 366 LEU CA HA sing N N 367 LEU C O doub N N 368 LEU C OXT sing N N 369 LEU CB CG sing N N 370 LEU CB HB2 sing N N 371 LEU CB HB3 sing N N 372 LEU CG CD1 sing N N 373 LEU CG CD2 sing N N 374 LEU CG HG sing N N 375 LEU CD1 HD11 sing N N 376 LEU CD1 HD12 sing N N 377 LEU CD1 HD13 sing N N 378 LEU CD2 HD21 sing N N 379 LEU CD2 HD22 sing N N 380 LEU CD2 HD23 sing N N 381 LEU OXT HXT sing N N 382 LYS N CA sing N N 383 LYS N H sing N N 384 LYS N H2 sing N N 385 LYS CA C sing N N 386 LYS CA CB sing N N 387 LYS CA HA sing N N 388 LYS C O doub N N 389 LYS C OXT sing N N 390 LYS CB CG sing N N 391 LYS CB HB2 sing N N 392 LYS CB HB3 sing N N 393 LYS CG CD sing N N 394 LYS CG HG2 sing N N 395 LYS CG HG3 sing N N 396 LYS CD CE sing N N 397 LYS CD HD2 sing N N 398 LYS CD HD3 sing N N 399 LYS CE NZ sing N N 400 LYS CE HE2 sing N N 401 LYS CE HE3 sing N N 402 LYS NZ HZ1 sing N N 403 LYS NZ HZ2 sing N N 404 LYS NZ HZ3 sing N N 405 LYS OXT HXT sing N N 406 MET N CA sing N N 407 MET N H sing N N 408 MET N H2 sing N N 409 MET CA C sing N N 410 MET CA CB sing N N 411 MET CA HA sing N N 412 MET C O doub N N 413 MET C OXT sing N N 414 MET CB CG sing N N 415 MET CB HB2 sing N N 416 MET CB HB3 sing N N 417 MET CG SD sing N N 418 MET CG HG2 sing N N 419 MET CG HG3 sing N N 420 MET SD CE sing N N 421 MET CE HE1 sing N N 422 MET CE HE2 sing N N 423 MET CE HE3 sing N N 424 MET OXT HXT sing N N 425 PHE N CA sing N N 426 PHE N H sing N N 427 PHE N H2 sing N N 428 PHE CA C sing N N 429 PHE CA CB sing N N 430 PHE CA HA sing N N 431 PHE C O doub N N 432 PHE C OXT sing N N 433 PHE CB CG sing N N 434 PHE CB HB2 sing N N 435 PHE CB HB3 sing N N 436 PHE CG CD1 doub Y N 437 PHE CG CD2 sing Y N 438 PHE CD1 CE1 sing Y N 439 PHE CD1 HD1 sing N N 440 PHE CD2 CE2 doub Y N 441 PHE CD2 HD2 sing N N 442 PHE CE1 CZ doub Y N 443 PHE CE1 HE1 sing N N 444 PHE CE2 CZ sing Y N 445 PHE CE2 HE2 sing N N 446 PHE CZ HZ sing N N 447 PHE OXT HXT sing N N 448 PRO N CA sing N N 449 PRO N CD sing N N 450 PRO N H sing N N 451 PRO CA C sing N N 452 PRO CA CB sing N N 453 PRO CA HA sing N N 454 PRO C O doub N N 455 PRO C OXT sing N N 456 PRO CB CG sing N N 457 PRO CB HB2 sing N N 458 PRO CB HB3 sing N N 459 PRO CG CD sing N N 460 PRO CG HG2 sing N N 461 PRO CG HG3 sing N N 462 PRO CD HD2 sing N N 463 PRO CD HD3 sing N N 464 PRO OXT HXT sing N N 465 S5Y C4 O1 sing N N 466 S5Y C4 C5 sing N N 467 S5Y C C1 sing N N 468 S5Y O1 C3 sing N N 469 S5Y C5 S sing N N 470 S5Y C1 O sing N N 471 S5Y O C2 sing N N 472 S5Y C3 C2 sing N N 473 S5Y C1 H1 sing N N 474 S5Y C1 H2 sing N N 475 S5Y C2 H3 sing N N 476 S5Y C2 H4 sing N N 477 S5Y C3 H5 sing N N 478 S5Y C3 H6 sing N N 479 S5Y C4 H7 sing N N 480 S5Y C4 H8 sing N N 481 S5Y C5 H9 sing N N 482 S5Y C5 H10 sing N N 483 S5Y S H11 sing N N 484 S5Y C H12 sing N N 485 S5Y C H13 sing N N 486 S5Y C H14 sing N N 487 SER N CA sing N N 488 SER N H sing N N 489 SER N H2 sing N N 490 SER CA C sing N N 491 SER CA CB sing N N 492 SER CA HA sing N N 493 SER C O doub N N 494 SER C OXT sing N N 495 SER CB OG sing N N 496 SER CB HB2 sing N N 497 SER CB HB3 sing N N 498 SER OG HG sing N N 499 SER OXT HXT sing N N 500 THR N CA sing N N 501 THR N H sing N N 502 THR N H2 sing N N 503 THR CA C sing N N 504 THR CA CB sing N N 505 THR CA HA sing N N 506 THR C O doub N N 507 THR C OXT sing N N 508 THR CB OG1 sing N N 509 THR CB CG2 sing N N 510 THR CB HB sing N N 511 THR OG1 HG1 sing N N 512 THR CG2 HG21 sing N N 513 THR CG2 HG22 sing N N 514 THR CG2 HG23 sing N N 515 THR OXT HXT sing N N 516 TRP N CA sing N N 517 TRP N H sing N N 518 TRP N H2 sing N N 519 TRP CA C sing N N 520 TRP CA CB sing N N 521 TRP CA HA sing N N 522 TRP C O doub N N 523 TRP C OXT sing N N 524 TRP CB CG sing N N 525 TRP CB HB2 sing N N 526 TRP CB HB3 sing N N 527 TRP CG CD1 doub Y N 528 TRP CG CD2 sing Y N 529 TRP CD1 NE1 sing Y N 530 TRP CD1 HD1 sing N N 531 TRP CD2 CE2 doub Y N 532 TRP CD2 CE3 sing Y N 533 TRP NE1 CE2 sing Y N 534 TRP NE1 HE1 sing N N 535 TRP CE2 CZ2 sing Y N 536 TRP CE3 CZ3 doub Y N 537 TRP CE3 HE3 sing N N 538 TRP CZ2 CH2 doub Y N 539 TRP CZ2 HZ2 sing N N 540 TRP CZ3 CH2 sing Y N 541 TRP CZ3 HZ3 sing N N 542 TRP CH2 HH2 sing N N 543 TRP OXT HXT sing N N 544 TYR N CA sing N N 545 TYR N H sing N N 546 TYR N H2 sing N N 547 TYR CA C sing N N 548 TYR CA CB sing N N 549 TYR CA HA sing N N 550 TYR C O doub N N 551 TYR C OXT sing N N 552 TYR CB CG sing N N 553 TYR CB HB2 sing N N 554 TYR CB HB3 sing N N 555 TYR CG CD1 doub Y N 556 TYR CG CD2 sing Y N 557 TYR CD1 CE1 sing Y N 558 TYR CD1 HD1 sing N N 559 TYR CD2 CE2 doub Y N 560 TYR CD2 HD2 sing N N 561 TYR CE1 CZ doub Y N 562 TYR CE1 HE1 sing N N 563 TYR CE2 CZ sing Y N 564 TYR CE2 HE2 sing N N 565 TYR CZ OH sing N N 566 TYR OH HH sing N N 567 TYR OXT HXT sing N N 568 VAL N CA sing N N 569 VAL N H sing N N 570 VAL N H2 sing N N 571 VAL CA C sing N N 572 VAL CA CB sing N N 573 VAL CA HA sing N N 574 VAL C O doub N N 575 VAL C OXT sing N N 576 VAL CB CG1 sing N N 577 VAL CB CG2 sing N N 578 VAL CB HB sing N N 579 VAL CG1 HG11 sing N N 580 VAL CG1 HG12 sing N N 581 VAL CG1 HG13 sing N N 582 VAL CG2 HG21 sing N N 583 VAL CG2 HG22 sing N N 584 VAL CG2 HG23 sing N N 585 VAL OXT HXT sing N N 586 # _ndb_struct_conf_na.entry_id 6W0M _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 1 1_555 C DG 14 1_555 0.141 0.179 0.280 5.033 -0.365 3.064 1 B_DC19:DG15_C B 19 ? C 15 ? 19 1 1 B DG 2 1_555 C DC 13 1_555 0.010 0.082 0.134 6.174 -13.695 -0.666 2 B_DG20:DC14_C B 20 ? C 14 ? 19 1 1 B DT 3 1_555 C DA 12 1_555 -0.128 -0.065 -0.087 1.574 -17.760 -6.339 3 B_DT21:DA13_C B 21 ? C 13 ? 20 1 1 B DC 4 1_555 C DG 11 1_555 0.078 0.017 0.088 -0.933 -12.960 -3.106 4 B_DC22:DG12_C B 22 ? C 12 ? 19 1 1 B DC 5 1_555 C DG 10 1_555 0.139 -0.031 0.191 -10.931 -10.108 0.848 5 B_DC23:DG11_C B 23 ? C 11 ? 19 1 1 B DA 6 1_555 C DT 9 1_555 -0.155 -0.050 0.046 7.028 -5.111 -0.059 6 B_DA24:DT10_C B 24 ? C 10 ? 20 1 1 B DG 8 1_555 C DC 7 1_555 -0.038 0.010 -0.241 -15.899 -0.654 -1.165 7 B_DG26:DC8_C B 26 ? C 8 ? 19 1 1 B DT 9 1_555 C DA 6 1_555 -0.220 0.008 0.452 -7.231 -6.962 0.178 8 B_DT27:DA7_C B 27 ? C 7 ? 20 1 1 B DC 10 1_555 C DG 5 1_555 0.637 0.125 -0.023 -2.224 -21.296 11.089 9 B_DC28:DG6_C B 28 ? C 6 ? 19 1 1 B DT 11 1_555 C DA 4 1_555 0.004 -0.145 0.057 3.476 -11.904 0.709 10 B_DT29:DA5_C B 29 ? C 5 ? 20 1 1 B DA 12 1_555 C DT 3 1_555 -0.510 0.058 0.463 12.339 -18.752 15.087 11 B_DA30:DT4_C B 30 ? C 4 ? 20 1 1 B DC 13 1_555 C DG 2 1_555 1.340 0.588 0.009 -8.768 -0.287 20.456 12 B_DC31:DG3_C B 31 ? C 3 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 1 1_555 C DG 14 1_555 B DG 2 1_555 C DC 13 1_555 -1.031 0.480 3.395 -2.451 -4.077 37.885 1.270 1.254 3.385 -6.250 3.757 38.171 1 BB_DC19DG20:DC14DG15_CC B 19 ? C 15 ? B 20 ? C 14 ? 1 B DG 2 1_555 C DC 13 1_555 B DT 3 1_555 C DA 12 1_555 -0.244 -0.675 3.338 0.119 -0.929 32.544 -1.038 0.456 3.354 -1.657 -0.212 32.557 2 BB_DG20DT21:DA13DC14_CC B 20 ? C 14 ? B 21 ? C 13 ? 1 B DT 3 1_555 C DA 12 1_555 B DC 4 1_555 C DG 11 1_555 0.408 -0.449 3.349 0.445 2.176 39.499 -0.925 -0.550 3.325 3.216 -0.658 39.559 3 BB_DT21DC22:DG12DA13_CC B 21 ? C 13 ? B 22 ? C 12 ? 1 B DC 4 1_555 C DG 11 1_555 B DC 5 1_555 C DG 10 1_555 0.913 0.141 3.422 2.595 3.520 37.132 -0.271 -1.063 3.474 5.504 -4.057 37.379 4 BB_DC22DC23:DG11DG12_CC B 22 ? C 12 ? B 23 ? C 11 ? 1 B DC 5 1_555 C DG 10 1_555 B DA 6 1_555 C DT 9 1_555 -0.394 0.789 2.965 1.612 7.455 28.646 0.072 1.089 3.043 14.740 -3.188 29.624 5 BB_DC23DA24:DT10DG11_CC B 23 ? C 11 ? B 24 ? C 10 ? 1 B DG 8 1_555 C DC 7 1_555 B DT 9 1_555 C DA 6 1_555 -0.630 -0.101 3.242 -7.066 -0.790 29.859 -0.034 -0.219 3.302 -1.507 13.474 30.675 6 BB_DG26DT27:DA7DC8_CC B 26 ? C 8 ? B 27 ? C 7 ? 1 B DT 9 1_555 C DA 6 1_555 B DC 10 1_555 C DG 5 1_555 0.961 0.172 3.093 6.621 0.127 39.576 0.237 -0.668 3.207 0.186 -9.696 40.105 7 BB_DT27DC28:DG6DA7_CC B 27 ? C 7 ? B 28 ? C 6 ? 1 B DC 10 1_555 C DG 5 1_555 B DT 11 1_555 C DA 4 1_555 -0.197 0.221 3.210 1.199 10.762 26.382 -2.001 0.673 3.051 22.416 -2.496 28.481 8 BB_DC28DT29:DA5DG6_CC B 28 ? C 6 ? B 29 ? C 5 ? 1 B DT 11 1_555 C DA 4 1_555 B DA 12 1_555 C DT 3 1_555 0.898 0.158 3.158 -1.719 3.667 33.139 -0.310 -1.838 3.108 6.399 3.000 33.379 9 BB_DT29DA30:DT4DA5_CC B 29 ? C 5 ? B 30 ? C 4 ? 1 B DA 12 1_555 C DT 3 1_555 B DC 13 1_555 C DG 2 1_555 0.032 0.248 3.966 3.410 4.542 43.368 -0.196 0.354 3.962 6.114 -4.590 43.721 10 BB_DA30DC31:DG3DT4_CC B 30 ? C 4 ? B 31 ? C 3 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Cancer Institute (NIH/NCI)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MAGNESIUM ION' MG 5 '2-(2-ethoxyethoxy)ethanethiol' S5Y 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1EBM _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support cross-linking _pdbx_struct_assembly_auth_evidence.details ? #