data_6Z5L # _entry.id 6Z5L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.336 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6Z5L WWPDB D_1292108283 EMDB EMD-11079 # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Helical reconstruction of influenza A virus M1 in complex with nucleic acid' _pdbx_database_related.db_id EMD-11079 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6Z5L _pdbx_database_status.recvd_initial_deposition_date 2020-05-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Xiong, X.' 1 0000-0002-4632-9122 'Qu, K.' 2 0000-0002-3152-2237 'Briggs, J.A.G.' 3 0000-0003-3990-6910 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? UK ? ? primary Nature NATUAS 0006 1476-4687 ? ? 587 ? 495 498 'The native structure of the assembled matrix protein 1 of influenza A virus.' 2020 ? 10.1038/s41586-020-2696-8 32908308 ? ? ? ? ? ? ? ? US ? ? 1 Biorxiv ? ? ? ? ? ? ? ? ? 'The native structure of the full-length, assembled influenza A virus matrix protein, M1.' 2020 ? 10.1101/2020.06.24.168567 ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Peukes, J.' 1 ? primary 'Xiong, X.' 2 ? primary 'Erlendsson, S.' 3 ? primary 'Qu, K.' 4 ? primary 'Wan, W.' 5 ? primary 'Calder, L.J.' 6 ? primary 'Schraidt, O.' 7 ? primary 'Kummer, S.' 8 ? primary 'Freund, S.M.V.' 9 ? primary 'Krausslich, H.G.' 10 ? primary 'Briggs, J.A.G.' 11 ? 1 'Peukes, J.' 12 0000-0001-8560-7407 1 'Xiong, X.' 13 0000-0002-4632-9122 1 'Erlendsson, S.' 14 0000-0002-6378-870X 1 'Qu, K.' 15 ? 1 'Wan, W.' 16 0000-0003-2497-3010 1 'Calder, L.J.' 17 ? 1 'Schraidt, O.' 18 0000-0001-8114-3713 1 'Kummer, S.' 19 0000-0003-1010-9889 1 'Freund, S.M.V.' 20 ? 1 'Krausslich, H.G.' 21 ? 1 'Briggs, J.A.G.' 22 0000-0003-3990-6910 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6Z5L _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Z5L _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Matrix protein 1' _entity.formula_weight 28971.430 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation R134K _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name M1 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSLLTEVETYVLSIIPSGPLKAEIAQRLEDVFAGKNTDLEVLMEWLKTRPILSPLTKGILGFVFTLTVPSERGLQRRRFV QNALNGNGDPNNMDKAVKLYRKLKREITFHGAKEISLSYSAGALASCMGLIYNKMGAVTTEVAFGLVCATCEQIADSQHR SHRQMVTTTNPLIRHENRMVLASTTAKAMEQMAGSSEQAAEAMEVASQARQMVQAMRTIGTHPSSSAGLKNDLLENLQAY QKRMGVQMQRFKLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MSLLTEVETYVLSIIPSGPLKAEIAQRLEDVFAGKNTDLEVLMEWLKTRPILSPLTKGILGFVFTLTVPSERGLQRRRFV QNALNGNGDPNNMDKAVKLYRKLKREITFHGAKEISLSYSAGALASCMGLIYNKMGAVTTEVAFGLVCATCEQIADSQHR SHRQMVTTTNPLIRHENRMVLASTTAKAMEQMAGSSEQAAEAMEVASQARQMVQAMRTIGTHPSSSAGLKNDLLENLQAY QKRMGVQMQRFKLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 LEU n 1 4 LEU n 1 5 THR n 1 6 GLU n 1 7 VAL n 1 8 GLU n 1 9 THR n 1 10 TYR n 1 11 VAL n 1 12 LEU n 1 13 SER n 1 14 ILE n 1 15 ILE n 1 16 PRO n 1 17 SER n 1 18 GLY n 1 19 PRO n 1 20 LEU n 1 21 LYS n 1 22 ALA n 1 23 GLU n 1 24 ILE n 1 25 ALA n 1 26 GLN n 1 27 ARG n 1 28 LEU n 1 29 GLU n 1 30 ASP n 1 31 VAL n 1 32 PHE n 1 33 ALA n 1 34 GLY n 1 35 LYS n 1 36 ASN n 1 37 THR n 1 38 ASP n 1 39 LEU n 1 40 GLU n 1 41 VAL n 1 42 LEU n 1 43 MET n 1 44 GLU n 1 45 TRP n 1 46 LEU n 1 47 LYS n 1 48 THR n 1 49 ARG n 1 50 PRO n 1 51 ILE n 1 52 LEU n 1 53 SER n 1 54 PRO n 1 55 LEU n 1 56 THR n 1 57 LYS n 1 58 GLY n 1 59 ILE n 1 60 LEU n 1 61 GLY n 1 62 PHE n 1 63 VAL n 1 64 PHE n 1 65 THR n 1 66 LEU n 1 67 THR n 1 68 VAL n 1 69 PRO n 1 70 SER n 1 71 GLU n 1 72 ARG n 1 73 GLY n 1 74 LEU n 1 75 GLN n 1 76 ARG n 1 77 ARG n 1 78 ARG n 1 79 PHE n 1 80 VAL n 1 81 GLN n 1 82 ASN n 1 83 ALA n 1 84 LEU n 1 85 ASN n 1 86 GLY n 1 87 ASN n 1 88 GLY n 1 89 ASP n 1 90 PRO n 1 91 ASN n 1 92 ASN n 1 93 MET n 1 94 ASP n 1 95 LYS n 1 96 ALA n 1 97 VAL n 1 98 LYS n 1 99 LEU n 1 100 TYR n 1 101 ARG n 1 102 LYS n 1 103 LEU n 1 104 LYS n 1 105 ARG n 1 106 GLU n 1 107 ILE n 1 108 THR n 1 109 PHE n 1 110 HIS n 1 111 GLY n 1 112 ALA n 1 113 LYS n 1 114 GLU n 1 115 ILE n 1 116 SER n 1 117 LEU n 1 118 SER n 1 119 TYR n 1 120 SER n 1 121 ALA n 1 122 GLY n 1 123 ALA n 1 124 LEU n 1 125 ALA n 1 126 SER n 1 127 CYS n 1 128 MET n 1 129 GLY n 1 130 LEU n 1 131 ILE n 1 132 TYR n 1 133 ASN n 1 134 LYS n 1 135 MET n 1 136 GLY n 1 137 ALA n 1 138 VAL n 1 139 THR n 1 140 THR n 1 141 GLU n 1 142 VAL n 1 143 ALA n 1 144 PHE n 1 145 GLY n 1 146 LEU n 1 147 VAL n 1 148 CYS n 1 149 ALA n 1 150 THR n 1 151 CYS n 1 152 GLU n 1 153 GLN n 1 154 ILE n 1 155 ALA n 1 156 ASP n 1 157 SER n 1 158 GLN n 1 159 HIS n 1 160 ARG n 1 161 SER n 1 162 HIS n 1 163 ARG n 1 164 GLN n 1 165 MET n 1 166 VAL n 1 167 THR n 1 168 THR n 1 169 THR n 1 170 ASN n 1 171 PRO n 1 172 LEU n 1 173 ILE n 1 174 ARG n 1 175 HIS n 1 176 GLU n 1 177 ASN n 1 178 ARG n 1 179 MET n 1 180 VAL n 1 181 LEU n 1 182 ALA n 1 183 SER n 1 184 THR n 1 185 THR n 1 186 ALA n 1 187 LYS n 1 188 ALA n 1 189 MET n 1 190 GLU n 1 191 GLN n 1 192 MET n 1 193 ALA n 1 194 GLY n 1 195 SER n 1 196 SER n 1 197 GLU n 1 198 GLN n 1 199 ALA n 1 200 ALA n 1 201 GLU n 1 202 ALA n 1 203 MET n 1 204 GLU n 1 205 VAL n 1 206 ALA n 1 207 SER n 1 208 GLN n 1 209 ALA n 1 210 ARG n 1 211 GLN n 1 212 MET n 1 213 VAL n 1 214 GLN n 1 215 ALA n 1 216 MET n 1 217 ARG n 1 218 THR n 1 219 ILE n 1 220 GLY n 1 221 THR n 1 222 HIS n 1 223 PRO n 1 224 SER n 1 225 SER n 1 226 SER n 1 227 ALA n 1 228 GLY n 1 229 LEU n 1 230 LYS n 1 231 ASN n 1 232 ASP n 1 233 LEU n 1 234 LEU n 1 235 GLU n 1 236 ASN n 1 237 LEU n 1 238 GLN n 1 239 ALA n 1 240 TYR n 1 241 GLN n 1 242 LYS n 1 243 ARG n 1 244 MET n 1 245 GLY n 1 246 VAL n 1 247 GLN n 1 248 MET n 1 249 GLN n 1 250 ARG n 1 251 PHE n 1 252 LYS n 1 253 LEU n 1 254 GLU n 1 255 HIS n 1 256 HIS n 1 257 HIS n 1 258 HIS n 1 259 HIS n 1 260 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 260 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Influenza A virus (strain A/Puerto Rico/8/1934 H1N1)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 211044 _entity_src_gen.pdbx_gene_src_variant R134K _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant Rosetta2 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code M1_I34A1 _struct_ref.pdbx_db_accession P03485 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSLLTEVETYVLSIIPSGPLKAEIAQRLEDVFAGKNTDLEVLMEWLKTRPILSPLTKGILGFVFTLTVPSERGLQRRRFV QNALNGNGDPNNMDKAVKLYRKLKREITFHGAKEISLSYSAGALASCMGLIYNRMGAVTTEVAFGLVCATCEQIADSQHR SHRQMVTTTNPLIRHENRMVLASTTAKAMEQMAGSSEQAAEAMEVASQARQMVQAMRTIGTHPSSSAGLKNDLLENLQAY QKRMGVQMQRFK ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6Z5L _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 252 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P03485 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 252 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 252 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6Z5L LYS A 134 ? UNP P03485 ARG 134 'engineered mutation' 134 1 1 6Z5L LEU A 253 ? UNP P03485 ? ? 'expression tag' 253 2 1 6Z5L GLU A 254 ? UNP P03485 ? ? 'expression tag' 254 3 1 6Z5L HIS A 255 ? UNP P03485 ? ? 'expression tag' 255 4 1 6Z5L HIS A 256 ? UNP P03485 ? ? 'expression tag' 256 5 1 6Z5L HIS A 257 ? UNP P03485 ? ? 'expression tag' 257 6 1 6Z5L HIS A 258 ? UNP P03485 ? ? 'expression tag' 258 7 1 6Z5L HIS A 259 ? UNP P03485 ? ? 'expression tag' 259 8 1 6Z5L HIS A 260 ? UNP P03485 ? ? 'expression tag' 260 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6Z5L _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 6Z5L _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.004 ? 31392 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.453 ? 42272 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 24.758 ? 4336 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.035 ? 4896 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.003 ? 5456 ? f_plane_restr ? ? # _struct.entry_id 6Z5L _struct.title 'Helical reconstruction of influenza A virus M1 in complex with nucleic acid.' _struct.pdbx_descriptor 'Matrix protein 1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6Z5L _struct_keywords.text 'M1, Matrix protein, Influenza virus, Assembly, ribonucleoprotein complex, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 2 ? ILE A 15 ? SER A 2 ILE A 15 1 ? 14 HELX_P HELX_P2 AA2 GLY A 18 ? PHE A 32 ? GLY A 18 PHE A 32 1 ? 15 HELX_P HELX_P3 AA3 ASP A 38 ? ARG A 49 ? ASP A 38 ARG A 49 1 ? 12 HELX_P HELX_P4 AA4 SER A 53 ? VAL A 68 ? SER A 53 VAL A 68 1 ? 16 HELX_P HELX_P5 AA5 ARG A 77 ? ASN A 85 ? ARG A 77 ASN A 85 1 ? 9 HELX_P HELX_P6 AA6 GLY A 86 ? GLY A 88 ? GLY A 86 GLY A 88 5 ? 3 HELX_P HELX_P7 AA7 ASP A 89 ? ARG A 105 ? ASP A 89 ARG A 105 1 ? 17 HELX_P HELX_P8 AA8 THR A 108 ? LEU A 117 ? THR A 108 LEU A 117 1 ? 10 HELX_P HELX_P9 AA9 SER A 120 ? ASN A 133 ? SER A 120 ASN A 133 1 ? 14 HELX_P HELX_P10 AB1 THR A 139 ? THR A 167 ? THR A 139 THR A 167 1 ? 29 HELX_P HELX_P11 AB2 ASN A 170 ? MET A 192 ? ASN A 170 MET A 192 1 ? 23 HELX_P HELX_P12 AB3 GLU A 197 ? GLY A 220 ? GLU A 197 GLY A 220 1 ? 24 HELX_P HELX_P13 AB4 HIS A 222 ? SER A 226 ? HIS A 222 SER A 226 5 ? 5 HELX_P HELX_P14 AB5 GLY A 228 ? LYS A 252 ? GLY A 228 LYS A 252 1 ? 25 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 6Z5L _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 TYR 10 10 10 TYR TYR A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 ILE 24 24 24 ILE ILE A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 GLN 26 26 26 GLN GLN A . n A 1 27 ARG 27 27 27 ARG ARG A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 PHE 32 32 32 PHE PHE A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 MET 43 43 43 MET MET A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 TRP 45 45 45 TRP TRP A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 THR 48 48 48 THR THR A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 SER 53 53 53 SER SER A . n A 1 54 PRO 54 54 54 PRO PRO A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 THR 56 56 56 THR THR A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 PHE 62 62 62 PHE PHE A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 PRO 69 69 69 PRO PRO A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 GLN 75 75 75 GLN GLN A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 ARG 77 77 77 ARG ARG A . n A 1 78 ARG 78 78 78 ARG ARG A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 GLN 81 81 81 GLN GLN A . n A 1 82 ASN 82 82 82 ASN ASN A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 ASN 85 85 85 ASN ASN A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ASN 87 87 87 ASN ASN A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 ASP 89 89 89 ASP ASP A . n A 1 90 PRO 90 90 90 PRO PRO A . n A 1 91 ASN 91 91 91 ASN ASN A . n A 1 92 ASN 92 92 92 ASN ASN A . n A 1 93 MET 93 93 93 MET MET A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 LYS 95 95 95 LYS LYS A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 TYR 100 100 100 TYR TYR A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 ARG 105 105 105 ARG ARG A . n A 1 106 GLU 106 106 106 GLU GLU A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 PHE 109 109 109 PHE PHE A . n A 1 110 HIS 110 110 110 HIS HIS A . n A 1 111 GLY 111 111 111 GLY GLY A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 ILE 115 115 115 ILE ILE A . n A 1 116 SER 116 116 116 SER SER A . n A 1 117 LEU 117 117 117 LEU LEU A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 TYR 119 119 119 TYR TYR A . n A 1 120 SER 120 120 120 SER SER A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 ALA 123 123 123 ALA ALA A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 ALA 125 125 125 ALA ALA A . n A 1 126 SER 126 126 126 SER SER A . n A 1 127 CYS 127 127 127 CYS CYS A . n A 1 128 MET 128 128 128 MET MET A . n A 1 129 GLY 129 129 129 GLY GLY A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 ILE 131 131 131 ILE ILE A . n A 1 132 TYR 132 132 132 TYR TYR A . n A 1 133 ASN 133 133 133 ASN ASN A . n A 1 134 LYS 134 134 134 LYS LYS A . n A 1 135 MET 135 135 135 MET MET A . n A 1 136 GLY 136 136 136 GLY GLY A . n A 1 137 ALA 137 137 137 ALA ALA A . n A 1 138 VAL 138 138 138 VAL VAL A . n A 1 139 THR 139 139 139 THR THR A . n A 1 140 THR 140 140 140 THR THR A . n A 1 141 GLU 141 141 141 GLU GLU A . n A 1 142 VAL 142 142 142 VAL VAL A . n A 1 143 ALA 143 143 143 ALA ALA A . n A 1 144 PHE 144 144 144 PHE PHE A . n A 1 145 GLY 145 145 145 GLY GLY A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 CYS 148 148 148 CYS CYS A . n A 1 149 ALA 149 149 149 ALA ALA A . n A 1 150 THR 150 150 150 THR THR A . n A 1 151 CYS 151 151 151 CYS CYS A . n A 1 152 GLU 152 152 152 GLU GLU A . n A 1 153 GLN 153 153 153 GLN GLN A . n A 1 154 ILE 154 154 154 ILE ILE A . n A 1 155 ALA 155 155 155 ALA ALA A . n A 1 156 ASP 156 156 156 ASP ASP A . n A 1 157 SER 157 157 157 SER SER A . n A 1 158 GLN 158 158 158 GLN GLN A . n A 1 159 HIS 159 159 159 HIS HIS A . n A 1 160 ARG 160 160 160 ARG ARG A . n A 1 161 SER 161 161 161 SER SER A . n A 1 162 HIS 162 162 162 HIS HIS A . n A 1 163 ARG 163 163 163 ARG ARG A . n A 1 164 GLN 164 164 164 GLN GLN A . n A 1 165 MET 165 165 165 MET MET A . n A 1 166 VAL 166 166 166 VAL VAL A . n A 1 167 THR 167 167 167 THR THR A . n A 1 168 THR 168 168 168 THR THR A . n A 1 169 THR 169 169 169 THR THR A . n A 1 170 ASN 170 170 170 ASN ASN A . n A 1 171 PRO 171 171 171 PRO PRO A . n A 1 172 LEU 172 172 172 LEU LEU A . n A 1 173 ILE 173 173 173 ILE ILE A . n A 1 174 ARG 174 174 174 ARG ARG A . n A 1 175 HIS 175 175 175 HIS HIS A . n A 1 176 GLU 176 176 176 GLU GLU A . n A 1 177 ASN 177 177 177 ASN ASN A . n A 1 178 ARG 178 178 178 ARG ARG A . n A 1 179 MET 179 179 179 MET MET A . n A 1 180 VAL 180 180 180 VAL VAL A . n A 1 181 LEU 181 181 181 LEU LEU A . n A 1 182 ALA 182 182 182 ALA ALA A . n A 1 183 SER 183 183 183 SER SER A . n A 1 184 THR 184 184 184 THR THR A . n A 1 185 THR 185 185 185 THR THR A . n A 1 186 ALA 186 186 186 ALA ALA A . n A 1 187 LYS 187 187 187 LYS LYS A . n A 1 188 ALA 188 188 188 ALA ALA A . n A 1 189 MET 189 189 189 MET MET A . n A 1 190 GLU 190 190 190 GLU GLU A . n A 1 191 GLN 191 191 191 GLN GLN A . n A 1 192 MET 192 192 192 MET MET A . n A 1 193 ALA 193 193 193 ALA ALA A . n A 1 194 GLY 194 194 194 GLY GLY A . n A 1 195 SER 195 195 195 SER SER A . n A 1 196 SER 196 196 196 SER SER A . n A 1 197 GLU 197 197 197 GLU GLU A . n A 1 198 GLN 198 198 198 GLN GLN A . n A 1 199 ALA 199 199 199 ALA ALA A . n A 1 200 ALA 200 200 200 ALA ALA A . n A 1 201 GLU 201 201 201 GLU GLU A . n A 1 202 ALA 202 202 202 ALA ALA A . n A 1 203 MET 203 203 203 MET MET A . n A 1 204 GLU 204 204 204 GLU GLU A . n A 1 205 VAL 205 205 205 VAL VAL A . n A 1 206 ALA 206 206 206 ALA ALA A . n A 1 207 SER 207 207 207 SER SER A . n A 1 208 GLN 208 208 208 GLN GLN A . n A 1 209 ALA 209 209 209 ALA ALA A . n A 1 210 ARG 210 210 210 ARG ARG A . n A 1 211 GLN 211 211 211 GLN GLN A . n A 1 212 MET 212 212 212 MET MET A . n A 1 213 VAL 213 213 213 VAL VAL A . n A 1 214 GLN 214 214 214 GLN GLN A . n A 1 215 ALA 215 215 215 ALA ALA A . n A 1 216 MET 216 216 216 MET MET A . n A 1 217 ARG 217 217 217 ARG ARG A . n A 1 218 THR 218 218 218 THR THR A . n A 1 219 ILE 219 219 219 ILE ILE A . n A 1 220 GLY 220 220 220 GLY GLY A . n A 1 221 THR 221 221 221 THR THR A . n A 1 222 HIS 222 222 222 HIS HIS A . n A 1 223 PRO 223 223 223 PRO PRO A . n A 1 224 SER 224 224 224 SER SER A . n A 1 225 SER 225 225 225 SER SER A . n A 1 226 SER 226 226 226 SER SER A . n A 1 227 ALA 227 227 227 ALA ALA A . n A 1 228 GLY 228 228 228 GLY GLY A . n A 1 229 LEU 229 229 229 LEU LEU A . n A 1 230 LYS 230 230 230 LYS LYS A . n A 1 231 ASN 231 231 231 ASN ASN A . n A 1 232 ASP 232 232 232 ASP ASP A . n A 1 233 LEU 233 233 233 LEU LEU A . n A 1 234 LEU 234 234 234 LEU LEU A . n A 1 235 GLU 235 235 235 GLU GLU A . n A 1 236 ASN 236 236 236 ASN ASN A . n A 1 237 LEU 237 237 237 LEU LEU A . n A 1 238 GLN 238 238 238 GLN GLN A . n A 1 239 ALA 239 239 239 ALA ALA A . n A 1 240 TYR 240 240 240 TYR TYR A . n A 1 241 GLN 241 241 241 GLN GLN A . n A 1 242 LYS 242 242 242 LYS LYS A . n A 1 243 ARG 243 243 243 ARG ARG A . n A 1 244 MET 244 244 244 MET MET A . n A 1 245 GLY 245 245 245 GLY GLY A . n A 1 246 VAL 246 246 246 VAL VAL A . n A 1 247 GLN 247 247 247 GLN GLN A . n A 1 248 MET 248 248 248 MET MET A . n A 1 249 GLN 249 249 249 GLN GLN A . n A 1 250 ARG 250 250 250 ARG ARG A . n A 1 251 PHE 251 251 251 PHE PHE A . n A 1 252 LYS 252 252 252 LYS LYS A . n A 1 253 LEU 253 253 ? ? ? A . n A 1 254 GLU 254 254 ? ? ? A . n A 1 255 HIS 255 255 ? ? ? A . n A 1 256 HIS 256 256 ? ? ? A . n A 1 257 HIS 257 257 ? ? ? A . n A 1 258 HIS 258 258 ? ? ? A . n A 1 259 HIS 259 259 ? ? ? A . n A 1 260 HIS 260 260 ? ? ? A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 80-meric _pdbx_struct_assembly.oligomeric_count 80 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression ;1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,65,66,67,68,69,70,71,72,73,74,75,76,77,78,79,80 ; _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 ? 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'point symmetry operation' ? ? 0.288766 0.957399 0.000700 -68.98903 -0.957399 0.288766 0.000684 471.30412 0.000453 -0.000868 1.000000 120.39783 3 'point symmetry operation' ? ? 0.467810 0.883829 0.000546 -98.84534 -0.883829 0.467810 0.000647 399.98904 0.000317 -0.000785 1.000000 117.32886 4 'point symmetry operation' ? ? 0.767260 0.641337 0.000272 -115.07771 -0.641337 0.767259 0.000490 246.94915 0.000106 -0.000550 1.000000 111.15392 5 'point symmetry operation' ? ? 0.629324 0.777143 0.000400 -114.40221 -0.777143 0.629324 0.000582 324.25825 0.000200 -0.000677 1.000000 114.24733 6 'point symmetry operation' ? ? 0.993438 0.114371 0.000020 -30.33337 -0.114371 0.993438 0.000091 34.16903 -0.000010 -0.000093 1.000000 101.80517 7 'point symmetry operation' ? ? 0.952792 0.303624 0.000078 -72.24055 -0.303624 0.952792 0.000240 99.13523 -0.000001 -0.000253 1.000000 104.93190 8 'point symmetry operation' ? ? 0.876445 0.481502 0.000162 -100.84588 -0.481502 0.876445 0.000374 170.95963 0.000038 -0.000406 1.000000 108.04832 9 'point symmetry operation' ? ? 0.962933 -0.269741 -0.000006 86.66585 0.269741 0.962933 -0.000223 -65.80431 0.000066 0.000214 1.000000 95.52917 10 'point symmetry operation' ? ? 0.996861 -0.079168 -0.000007 23.30519 0.079168 0.996861 -0.000064 -21.50680 0.000012 0.000063 1.000000 98.67073 11 'point symmetry operation' ? ? 0.892925 -0.450206 0.000028 157.37331 0.450206 0.892924 -0.000380 -97.06424 0.000146 0.000351 1.000000 92.38357 12 'point symmetry operation' ? ? 0.789459 -0.613803 0.000091 232.77870 0.613803 0.789459 -0.000525 -114.11611 0.000250 0.000470 1.000000 89.23645 13 'point symmetry operation' ? ? 0.656412 -0.754402 0.000180 310.05724 0.754402 0.656412 -0.000656 -116.32002 0.000376 0.000567 1.000000 86.08942 14 'point symmetry operation' ? ? 0.498772 -0.866733 0.000294 386.31207 0.866733 0.498771 -0.000768 -103.59352 0.000519 0.000637 1.000000 82.94502 15 'point symmetry operation' ? ? 0.322442 -0.946589 0.000427 458.68666 0.946589 0.322441 -0.000854 -76.41397 0.000671 0.000679 1.000000 79.80595 16 'point symmetry operation' ? ? 0.134031 -0.990977 0.000575 524.46824 0.990977 0.134031 -0.000915 -35.79911 0.000830 0.000692 0.999999 76.67344 17 'point symmetry operation' ? ? -0.059403 -0.998234 0.000730 581.19379 0.998234 -0.059404 -0.000946 16.72892 0.000988 0.000672 0.999999 73.55039 18 'point symmetry operation' ? ? -0.250610 -0.968088 0.000888 626.73615 0.968087 -0.250611 -0.000947 79.20221 0.001139 0.000622 0.999999 70.43745 19 'point symmetry operation' ? ? -0.432428 -0.901668 0.001043 659.38931 0.901667 -0.432429 -0.000916 149.27964 0.001277 0.000544 0.999999 67.33616 20 'point symmetry operation' ? ? -0.741248 -0.671230 0.001324 681.66144 0.671230 -0.741249 -0.000769 301.55739 0.001498 0.000319 0.999999 61.16934 21 'point symmetry operation' ? ? -0.598042 -0.801464 0.001191 677.92905 0.801464 -0.598043 -0.000857 224.33548 0.001399 0.000442 0.999999 64.24653 22 'point symmetry operation' ? ? -0.856681 -0.515844 0.001437 670.44642 0.515844 -0.856682 -0.000658 378.05273 0.001571 0.000178 0.999999 58.10434 23 'point symmetry operation' ? ? -0.940014 -0.341131 0.001528 644.70378 0.341131 -0.940016 -0.000527 450.95440 0.001616 0.000026 0.999999 55.05044 24 'point symmetry operation' ? ? -0.988126 -0.153637 0.001591 605.39831 0.153636 -0.988127 -0.000381 517.53107 0.001630 -0.000132 0.999999 52.00676 25 'point symmetry operation' ? ? -0.999214 0.039615 0.001625 554.00233 -0.039615 -0.999215 -0.000227 575.28889 0.001615 -0.000292 0.999999 48.97190 26 'point symmetry operation' ? ? -0.972861 0.231383 0.001629 492.44136 -0.231383 -0.972863 -0.000067 622.06258 0.001569 -0.000442 0.999999 45.94337 27 'point symmetry operation' ? ? -0.910057 0.414480 0.001601 423.02296 -0.414480 -0.910058 0.000089 656.10012 0.001494 -0.000582 0.999999 42.91988 28 'point symmetry operation' ? ? -0.685782 0.727806 0.001460 271.21180 -0.727806 -0.685783 0.000372 681.39103 0.001272 -0.000807 0.999999 36.87795 29 'point symmetry operation' ? ? -0.813153 0.582047 0.001545 348.34655 -0.582048 -0.813154 0.000236 676.12689 0.001394 -0.000707 0.999999 39.89911 30 'point symmetry operation' ? ? -0.532714 0.846294 0.001351 194.50750 -0.846294 -0.532715 0.000487 671.69655 0.001132 -0.000884 0.999999 33.85478 31 'point symmetry operation' ? ? -0.359688 0.933072 0.001222 121.10833 -0.933072 -0.359688 0.000580 647.40644 0.000980 -0.000932 0.999999 30.82708 32 'point symmetry operation' ? ? -0.173182 0.984889 0.001078 53.76364 -0.984889 -0.173183 0.000646 609.43040 0.000823 -0.000950 0.999999 27.79258 33 'point symmetry operation' ? ? 0.019812 0.999803 0.000924 -5.00288 -0.999804 0.019811 0.000683 559.19162 0.000664 -0.000937 0.999999 24.74955 34 'point symmetry operation' ? ? 0.212063 0.977256 0.000764 -52.98878 -0.977256 0.212062 0.000691 498.57238 0.000513 -0.000893 0.999999 21.69596 35 'point symmetry operation' ? ? 0.396369 0.918091 0.000607 -88.39740 -0.918091 0.396368 0.000666 429.84457 0.000371 -0.000822 1.000000 18.63179 36 'point symmetry operation' ? ? 0.565824 0.824526 0.000459 -109.90164 -0.824526 0.565824 0.000612 355.58262 0.000245 -0.000725 1.000000 15.55572 37 'point symmetry operation' ? ? 0.714077 0.700067 0.000322 -116.69525 -0.700067 0.714077 0.000531 278.56983 0.000141 -0.000604 1.000000 12.46712 38 'point symmetry operation' ? ? 0.835574 0.549378 0.000204 -108.52424 -0.549378 0.835574 0.000424 201.69182 0.000062 -0.000466 1.000000 9.36638 39 'point symmetry operation' ? ? 0.925764 0.378103 0.000109 -85.69502 -0.378103 0.925764 0.000296 127.82847 0.000010 -0.000315 1.000000 6.25424 40 'point symmetry operation' ? ? 0.981266 0.192660 0.000040 -49.06246 -0.192660 0.981265 0.000154 59.74720 -0.000010 -0.000158 1.000000 3.13156 41 'point symmetry operation' ? ? 0.789690 0.613506 -0.000043 -113.11416 0.613504 -0.789689 -0.001995 333.12121 -0.001258 0.001549 -0.999998 653.47824 42 'point symmetry operation' ? ? 0.656697 0.754154 0.000353 -115.52664 0.754153 -0.656696 -0.001807 255.80897 -0.001131 0.001453 -0.999998 650.38583 43 'point symmetry operation' ? ? 0.499098 0.866545 0.000703 -102.99823 0.866545 -0.499096 -0.001547 179.48062 -0.000989 0.001381 -0.999999 647.28187 44 'point symmetry operation' ? ? 0.322799 0.946467 0.000998 -75.99962 0.946467 -0.322798 -0.001224 106.99720 -0.000836 0.001340 -0.999999 644.16649 45 'point symmetry operation' ? ? 0.134405 0.990926 0.001225 -35.54202 0.990926 -0.134404 -0.000850 41.07330 -0.000678 0.001328 -0.999999 641.04093 46 'point symmetry operation' ? ? -0.059026 0.998256 0.001375 16.85888 0.998256 0.059026 -0.000439 -15.82044 -0.000520 0.001347 -0.999999 637.90701 47 'point symmetry operation' ? ? -0.250245 0.968182 0.001444 79.23921 0.968183 0.250245 -0.000008 -61.55211 -0.000369 0.001396 -0.999999 634.76647 48 'point symmetry operation' ? ? -0.432087 0.901831 0.001428 149.26120 0.901832 0.432086 0.000428 -94.40808 -0.000231 0.001473 -0.999999 631.62146 49 'point symmetry operation' ? ? -0.597738 0.801690 0.001329 224.30163 0.801691 0.597738 0.000856 -113.15825 -0.000108 0.001577 -0.999999 628.47368 50 'point symmetry operation' ? ? -0.740996 0.671509 0.001149 301.54904 0.671510 0.740995 0.001253 -117.09836 -0.000010 0.001700 -0.999999 625.32682 51 'point symmetry operation' ? ? -0.856487 0.516169 0.000896 378.10790 0.516169 0.856485 0.001609 -106.08209 0.000063 0.001841 -0.999998 622.18214 52 'point symmetry operation' ? ? -0.988069 0.154011 0.000210 517.82079 0.154011 0.988067 0.002144 -41.37504 0.000123 0.002151 -0.999998 615.90913 53 'point symmetry operation' ? ? -0.939886 0.341487 0.000579 451.11043 0.341488 0.939884 0.001911 -80.52198 0.000108 0.001994 -0.999998 619.04200 54 'point symmetry operation' ? ? -0.999230 -0.039237 -0.000198 575.73950 -0.039237 0.999227 0.002302 9.89163 0.000107 0.002308 -0.999997 612.78484 55 'point symmetry operation' ? ? -0.972951 -0.231013 -0.000628 622.69587 -0.231013 0.972948 0.002380 71.35621 0.000061 0.002460 -0.999997 609.67055 56 'point symmetry operation' ? ? -0.910216 -0.414133 -0.001065 656.93087 -0.414134 0.910213 0.002374 140.71619 -0.000013 0.002602 -0.999997 606.56747 57 'point symmetry operation' ? ? -0.813376 -0.581736 -0.001493 677.16157 -0.581738 0.813373 0.002282 215.37370 -0.000113 0.002724 -0.999996 603.47661 58 'point symmetry operation' ? ? -0.686059 -0.727544 -0.001894 682.62934 -0.727546 0.686056 0.002110 292.53076 -0.000236 0.002826 -0.999996 600.39830 59 'point symmetry operation' ? ? -0.533037 -0.846089 -0.002256 673.13015 -0.846092 0.533034 0.001865 369.29549 -0.000375 0.002902 -0.999996 597.33172 60 'point symmetry operation' ? ? -0.360042 -0.932932 -0.002564 649.01936 -0.932936 0.360039 0.001553 442.79318 -0.000526 0.002951 -0.999996 594.27637 61 'point symmetry operation' ? ? -0.173557 -0.984820 -0.002804 611.19967 -0.984824 0.173554 0.001189 510.26890 -0.000684 0.002968 -0.999995 591.23188 62 'point symmetry operation' ? ? 0.211692 -0.977332 -0.003057 500.56438 -0.977336 -0.211694 0.000356 617.36252 -0.000995 0.002912 -0.999995 585.16712 63 'point symmetry operation' ? ? 0.019432 -0.999807 -0.002971 561.08879 -0.999811 -0.019435 0.000785 569.19477 -0.000842 0.002955 -0.999995 588.19594 64 'point symmetry operation' ? ? 0.396019 -0.918237 -0.003059 431.89433 -0.918242 -0.396020 -0.000081 652.96772 -0.001137 0.002841 -0.999995 582.14312 65 'point symmetry operation' ? ? 0.565508 -0.824737 -0.002976 357.65026 -0.824742 -0.565510 -0.000512 674.67693 -0.001260 0.002744 -0.999995 579.12151 66 'point symmetry operation' ? ? 0.713811 -0.700333 -0.002811 280.61431 -0.700338 -0.713811 -0.000915 681.67493 -0.001366 0.002622 -0.999996 576.10111 67 'point symmetry operation' ? ? 0.835365 -0.549690 -0.002573 203.67421 -0.549694 -0.835365 -0.001281 673.70101 -0.001445 0.002485 -0.999996 573.07838 68 'point symmetry operation' ? ? 0.925619 -0.378450 -0.002268 129.71164 -0.378454 -0.925619 -0.001595 651.05395 -0.001496 0.002335 -0.999996 570.05105 69 'point symmetry operation' ? ? 0.981191 -0.193030 -0.001908 61.49783 -0.193033 -0.981190 -0.001844 614.58172 -0.001516 0.002177 -0.999996 567.01742 70 'point symmetry operation' ? ? 0.999999 -0.000376 -0.001507 1.58852 -0.000379 -0.999998 -0.002018 565.65077 -0.001507 0.002018 -0.999997 563.97549 71 'point symmetry operation' ? ? 0.981337 0.192291 -0.001081 -47.77084 0.192288 -0.981336 -0.002113 506.09559 -0.001467 0.001865 -0.999997 560.92361 72 'point symmetry operation' ? ? 0.925906 0.377753 -0.000643 -84.73189 0.377751 -0.925905 -0.002123 438.14675 -0.001398 0.001723 -0.999998 557.86044 73 'point symmetry operation' ? ? 0.835782 0.549061 -0.000213 -107.90899 0.549060 -0.835781 -0.002049 364.35035 -0.001303 0.001595 -0.999998 554.78570 74 'point symmetry operation' ? ? 0.714342 0.699797 0.000195 -116.43433 0.699796 -0.714340 -0.001893 287.47163 -0.001185 0.001489 -0.999998 551.69859 75 'point symmetry operation' ? ? 0.566135 0.824312 0.000566 -109.98844 0.824312 -0.566134 -0.001661 210.39108 -0.001049 0.001407 -0.999998 548.59927 76 'point symmetry operation' ? ? 0.396716 0.917941 0.000884 -88.81253 0.917941 -0.396715 -0.001363 135.99709 -0.000900 0.001352 -0.999999 545.48867 77 'point symmetry operation' ? ? 0.212435 0.977175 0.001141 -53.70174 0.977175 -0.212434 -0.001007 67.07720 -0.000742 0.001329 -0.999999 542.36665 78 'point symmetry operation' ? ? 0.020191 0.999795 0.001324 -5.96946 0.999796 -0.020190 -0.000612 6.21363 -0.000585 0.001336 -0.999999 539.23633 79 'point symmetry operation' ? ? -0.172809 0.984954 0.001427 52.59424 0.984955 0.172809 -0.000185 -44.31378 -0.000429 0.001373 -0.999999 536.09784 80 'point symmetry operation' ? ? -0.359333 0.933208 0.001445 119.79588 0.933209 0.359333 0.000251 -82.61055 -0.000285 0.001438 -0.999999 532.95457 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-10-14 2 'Structure model' 1 1 2020-10-21 3 'Structure model' 1 2 2020-12-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' struct 2 3 'Structure model' citation 3 3 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_struct.title' 2 3 'Structure model' '_citation.journal_volume' 3 3 'Structure model' '_citation.page_first' 4 3 'Structure model' '_citation.page_last' 5 3 'Structure model' '_citation_author.identifier_ORCID' # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version 1.17.1_3660: _software.pdbx_ordinal 1 # _em_3d_fitting.entry_id 6Z5L _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value 37.9 _em_3d_fitting.ref_protocol 'AB INITIO MODEL' _em_3d_fitting.ref_space REAL _em_3d_fitting.target_criteria 'correlation coefficient' _em_3d_fitting.method ? # _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.id 1 _em_3d_fitting_list.details ? _em_3d_fitting_list.pdb_chain_id A _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.pdb_entry_id 1AA7 # _em_3d_reconstruction.entry_id 6Z5L _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm 'FOURIER SPACE' _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages 1 _em_3d_reconstruction.num_particles 17984 _em_3d_reconstruction.resolution 3.8 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type HELICAL _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 10 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details 'Influenza A M1 in complex with 6.4 Kb DNA plasmid' _em_entity_assembly.name 'Helical reconstruction of influenza A virus M1 protein in complex with nucleic acid' _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_imaging.id 1 _em_imaging.entry_id 6Z5L _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure 'COMA FREE' _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen NITROGEN _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_max 3000 _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_magnification 105000 _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 200 _em_sample_support.grid_type C-flat-2/2 _em_sample_support.method ? _em_sample_support.film_material ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 298 _em_vitrification.cryogen_name ETHANE _em_vitrification.details 'sample was applied 3 times each with 30s adsorption time' _em_vitrification.humidity 100 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.entry_id 6Z5L _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 6Z5L _em_experiment.id 1 _em_experiment.aggregation_state 'HELICAL ARRAY' _em_experiment.reconstruction_method HELICAL _em_experiment.entity_assembly_id 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 35 ? ? -91.19 30.68 2 1 SER A 70 ? ? 63.69 63.16 3 1 ARG A 72 ? ? 60.27 69.11 4 1 LEU A 74 ? ? -79.50 -168.24 5 1 ALA A 137 ? ? -162.31 116.38 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A LEU 253 ? A LEU 253 3 1 Y 1 A GLU 254 ? A GLU 254 4 1 Y 1 A HIS 255 ? A HIS 255 5 1 Y 1 A HIS 256 ? A HIS 256 6 1 Y 1 A HIS 257 ? A HIS 257 7 1 Y 1 A HIS 258 ? A HIS 258 8 1 Y 1 A HIS 259 ? A HIS 259 9 1 Y 1 A HIS 260 ? A HIS 260 # loop_ _em_buffer_component.buffer_id _em_buffer_component.id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.name 1 1 150 mM NaCl 'sodium chloride' 1 2 100 mM C2H5NO2 glycine # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # loop_ _em_entity_assembly_molwt.entity_assembly_id _em_entity_assembly_molwt.id _em_entity_assembly_molwt.experimental_flag _em_entity_assembly_molwt.units _em_entity_assembly_molwt.value 1 1 YES MEGADALTONS 0.028 1 2 YES MEGADALTONS 3.978 1 3 YES MEGADALTONS 0.028 # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 211044 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Influenza A virus (strain A/Puerto Rico/8/1934 H1N1)' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.ncbi_tax_id 469008 _em_entity_assembly_recombinant.organism 'Escherichia coli BL21(DE3)' _em_entity_assembly_recombinant.plasmid pET21b _em_entity_assembly_recombinant.strain 'Rosetta 2' # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.angular_rotation_per_subunit -11.1081 _em_helical_entity.axial_rise_per_subunit 3.08413 _em_helical_entity.axial_symmetry D1 _em_helical_entity.details ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 47.1 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 2347 # _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_name 'GIF Quantum LS' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.energyfilter_slit_width 20 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? # _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.details 'Manual picking' _em_particle_selection.method ? _em_particle_selection.num_particles_selected 463152 _em_particle_selection.reference_model ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'CRYSTALLOGRAPHY MERGING' ? ? ? 1 1 1 2 'PARTICLE SELECTION' 'Used for selecting segments of similar diameters' SPRING 0.86 1 ? ? 3 'IMAGE ACQUISITION' ? SerialEM 3.7 ? ? 1 4 MASKING ? ? ? ? ? ? 5 'CTF CORRECTION' ? CTFFIND 4 1 ? ? 6 'LAYERLINE INDEXING' ? ? ? ? ? ? 7 'DIFFRACTION INDEXING' ? ? ? ? ? ? 8 'MODEL FITTING' ? Coot 0.9 ? 1 ? 9 OTHER ? ? ? ? ? ? 10 'MODEL REFINEMENT' ? PHENIX 1.18.2 ? 1 ? 11 'INITIAL EULER ASSIGNMENT' ? RELION 3.08 1 ? ? 12 'FINAL EULER ASSIGNMENT' ? RELION 3.08 1 ? ? 13 CLASSIFICATION ? RELION 3.08 1 ? ? 14 RECONSTRUCTION ? RELION 3.08 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration 0.1 _em_specimen.details ;M1 at 0.1 mg/ml plasmid DNA at 0.25 mg/ml ; _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Medical Research Council (MRC, United Kingdom)' 'United Kingdom' MC_UP_1201/16 1 'European Research Council (ERC)' 'European Union' ERC-CoG-648432 2 'German Research Foundation (DFG)' Germany '240245660 - SFB1129' 3 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support microscopy _pdbx_struct_assembly_auth_evidence.details '32.4 D1 dimer per helical turn' #