data_7ALK # _entry.id 7ALK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.384 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7ALK pdb_00007alk 10.2210/pdb7alk/pdb WWPDB D_1292111652 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-08-04 2 'Structure model' 1 1 2021-10-13 3 'Structure model' 1 2 2024-01-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' database_2 4 2 'Structure model' diffrn_source 5 2 'Structure model' pdbx_database_proc 6 3 'Structure model' chem_comp_atom 7 3 'Structure model' chem_comp_bond 8 3 'Structure model' diffrn_source 9 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.pdbx_database_id_DOI' 5 2 'Structure model' '_citation.pdbx_database_id_PubMed' 6 2 'Structure model' '_citation.title' 7 2 'Structure model' '_citation_author.identifier_ORCID' 8 2 'Structure model' '_citation_author.name' 9 2 'Structure model' '_database_2.pdbx_DOI' 10 2 'Structure model' '_database_2.pdbx_database_accession' 11 2 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 12 3 'Structure model' '_diffrn_source.pdbx_synchrotron_site' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7ALK _pdbx_database_status.recvd_initial_deposition_date 2020-10-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Suckling, R.' 1 ? 'Johnson, S.' 2 ? 'Lea, S.M.' 3 0000-0001-9287-8053 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Embo Rep.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1469-3178 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 22 _citation.language ? _citation.page_first e52729 _citation.page_last e52729 _citation.title 'The conserved C2 phospholipid-binding domain in Delta contributes to robust Notch signalling.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.15252/embr.202152729 _citation.pdbx_database_id_PubMed 34347930 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Martins, T.' 1 0000-0002-9359-7111 primary 'Meng, Y.' 2 ? primary 'Korona, B.' 3 ? primary 'Suckling, R.' 4 ? primary 'Johnson, S.' 5 ? primary 'Handford, P.A.' 6 0000-0002-0590-7651 primary 'Lea, S.M.' 7 0000-0001-9287-8053 primary 'Bray, S.J.' 8 0000-0002-1642-599X # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Neurogenic locus protein delta' 26419.477 1 ? ? ? ? 2 branched man ;alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 1056.964 1 ? ? ? ? 3 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? 4 water nat water 18.015 2 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Delta # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SGSFELRLKYFSNDHGRDNEGRCCSGESDGATGKCLGSCKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDA QRFQNKGFTNPIQFPFSFSWPGTFSLIVEAWHDTNNSGNARTNKLLIQRLLVQQVLEVSSEWKTNKSESQYTSLEYDFRV TCDLNYYGSGCAKFCRPRDDSFGHSTCSETGEIICLTGWQGDYCHIPKCAKGCEHGHCDKPNQCVCQLGWKGALCN ; _entity_poly.pdbx_seq_one_letter_code_can ;SGSFELRLKYFSNDHGRDNEGRCCSGESDGATGKCLGSCKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDA QRFQNKGFTNPIQFPFSFSWPGTFSLIVEAWHDTNNSGNARTNKLLIQRLLVQQVLEVSSEWKTNKSESQYTSLEYDFRV TCDLNYYGSGCAKFCRPRDDSFGHSTCSETGEIICLTGWQGDYCHIPKCAKGCEHGHCDKPNQCVCQLGWKGALCN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLY n 1 3 SER n 1 4 PHE n 1 5 GLU n 1 6 LEU n 1 7 ARG n 1 8 LEU n 1 9 LYS n 1 10 TYR n 1 11 PHE n 1 12 SER n 1 13 ASN n 1 14 ASP n 1 15 HIS n 1 16 GLY n 1 17 ARG n 1 18 ASP n 1 19 ASN n 1 20 GLU n 1 21 GLY n 1 22 ARG n 1 23 CYS n 1 24 CYS n 1 25 SER n 1 26 GLY n 1 27 GLU n 1 28 SER n 1 29 ASP n 1 30 GLY n 1 31 ALA n 1 32 THR n 1 33 GLY n 1 34 LYS n 1 35 CYS n 1 36 LEU n 1 37 GLY n 1 38 SER n 1 39 CYS n 1 40 LYS n 1 41 THR n 1 42 ARG n 1 43 PHE n 1 44 ARG n 1 45 VAL n 1 46 CYS n 1 47 LEU n 1 48 LYS n 1 49 HIS n 1 50 TYR n 1 51 GLN n 1 52 ALA n 1 53 THR n 1 54 ILE n 1 55 ASP n 1 56 THR n 1 57 THR n 1 58 SER n 1 59 GLN n 1 60 CYS n 1 61 THR n 1 62 TYR n 1 63 GLY n 1 64 ASP n 1 65 VAL n 1 66 ILE n 1 67 THR n 1 68 PRO n 1 69 ILE n 1 70 LEU n 1 71 GLY n 1 72 GLU n 1 73 ASN n 1 74 SER n 1 75 VAL n 1 76 ASN n 1 77 LEU n 1 78 THR n 1 79 ASP n 1 80 ALA n 1 81 GLN n 1 82 ARG n 1 83 PHE n 1 84 GLN n 1 85 ASN n 1 86 LYS n 1 87 GLY n 1 88 PHE n 1 89 THR n 1 90 ASN n 1 91 PRO n 1 92 ILE n 1 93 GLN n 1 94 PHE n 1 95 PRO n 1 96 PHE n 1 97 SER n 1 98 PHE n 1 99 SER n 1 100 TRP n 1 101 PRO n 1 102 GLY n 1 103 THR n 1 104 PHE n 1 105 SER n 1 106 LEU n 1 107 ILE n 1 108 VAL n 1 109 GLU n 1 110 ALA n 1 111 TRP n 1 112 HIS n 1 113 ASP n 1 114 THR n 1 115 ASN n 1 116 ASN n 1 117 SER n 1 118 GLY n 1 119 ASN n 1 120 ALA n 1 121 ARG n 1 122 THR n 1 123 ASN n 1 124 LYS n 1 125 LEU n 1 126 LEU n 1 127 ILE n 1 128 GLN n 1 129 ARG n 1 130 LEU n 1 131 LEU n 1 132 VAL n 1 133 GLN n 1 134 GLN n 1 135 VAL n 1 136 LEU n 1 137 GLU n 1 138 VAL n 1 139 SER n 1 140 SER n 1 141 GLU n 1 142 TRP n 1 143 LYS n 1 144 THR n 1 145 ASN n 1 146 LYS n 1 147 SER n 1 148 GLU n 1 149 SER n 1 150 GLN n 1 151 TYR n 1 152 THR n 1 153 SER n 1 154 LEU n 1 155 GLU n 1 156 TYR n 1 157 ASP n 1 158 PHE n 1 159 ARG n 1 160 VAL n 1 161 THR n 1 162 CYS n 1 163 ASP n 1 164 LEU n 1 165 ASN n 1 166 TYR n 1 167 TYR n 1 168 GLY n 1 169 SER n 1 170 GLY n 1 171 CYS n 1 172 ALA n 1 173 LYS n 1 174 PHE n 1 175 CYS n 1 176 ARG n 1 177 PRO n 1 178 ARG n 1 179 ASP n 1 180 ASP n 1 181 SER n 1 182 PHE n 1 183 GLY n 1 184 HIS n 1 185 SER n 1 186 THR n 1 187 CYS n 1 188 SER n 1 189 GLU n 1 190 THR n 1 191 GLY n 1 192 GLU n 1 193 ILE n 1 194 ILE n 1 195 CYS n 1 196 LEU n 1 197 THR n 1 198 GLY n 1 199 TRP n 1 200 GLN n 1 201 GLY n 1 202 ASP n 1 203 TYR n 1 204 CYS n 1 205 HIS n 1 206 ILE n 1 207 PRO n 1 208 LYS n 1 209 CYS n 1 210 ALA n 1 211 LYS n 1 212 GLY n 1 213 CYS n 1 214 GLU n 1 215 HIS n 1 216 GLY n 1 217 HIS n 1 218 CYS n 1 219 ASP n 1 220 LYS n 1 221 PRO n 1 222 ASN n 1 223 GLN n 1 224 CYS n 1 225 VAL n 1 226 CYS n 1 227 GLN n 1 228 LEU n 1 229 GLY n 1 230 TRP n 1 231 LYS n 1 232 GLY n 1 233 ALA n 1 234 LEU n 1 235 CYS n 1 236 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 236 _entity_src_gen.gene_src_common_name 'Fruit fly' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Dl, CG3619' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Drosophila melanogaster' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7227 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'Fruit fly' _entity_src_gen.pdbx_host_org_scientific_name 'Drosophila melanogaster' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7227 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line 'S2 cells' _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'DManpa1-3[DManpa1-6]DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/4,6,5/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a1221m-1a_1-5]/1-1-2-3-3-4/a4-b1_a6-f1_b4-c1_c3-d1_c6-e1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}[(6+1)][a-D-Manp]{}}}[(6+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 2 4 MAN C1 O1 3 BMA O3 HO3 sing ? 4 2 5 MAN C1 O1 3 BMA O6 HO6 sing ? 5 2 6 FUC C1 O1 1 NAG O6 HO6 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 23 23 SER SER A . n A 1 2 GLY 2 24 24 GLY GLY A . n A 1 3 SER 3 25 25 SER SER A . n A 1 4 PHE 4 26 26 PHE PHE A . n A 1 5 GLU 5 27 27 GLU GLU A . n A 1 6 LEU 6 28 28 LEU LEU A . n A 1 7 ARG 7 29 29 ARG ARG A . n A 1 8 LEU 8 30 30 LEU LEU A . n A 1 9 LYS 9 31 31 LYS LYS A . n A 1 10 TYR 10 32 32 TYR TYR A . n A 1 11 PHE 11 33 33 PHE PHE A . n A 1 12 SER 12 34 34 SER SER A . n A 1 13 ASN 13 35 35 ASN ASN A . n A 1 14 ASP 14 36 36 ASP ASP A . n A 1 15 HIS 15 37 37 HIS HIS A . n A 1 16 GLY 16 38 38 GLY GLY A . n A 1 17 ARG 17 39 39 ARG ARG A . n A 1 18 ASP 18 40 40 ASP ASP A . n A 1 19 ASN 19 41 41 ASN ASN A . n A 1 20 GLU 20 42 42 GLU GLU A . n A 1 21 GLY 21 43 43 GLY GLY A . n A 1 22 ARG 22 44 44 ARG ARG A . n A 1 23 CYS 23 45 45 CYS CYS A . n A 1 24 CYS 24 46 46 CYS CYS A . n A 1 25 SER 25 47 47 SER SER A . n A 1 26 GLY 26 48 48 GLY GLY A . n A 1 27 GLU 27 49 49 GLU GLU A . n A 1 28 SER 28 50 50 SER ALA A . n A 1 29 ASP 29 51 51 ASP ASP A . n A 1 30 GLY 30 52 52 GLY GLY A . n A 1 31 ALA 31 53 53 ALA ALA A . n A 1 32 THR 32 54 54 THR THR A . n A 1 33 GLY 33 55 55 GLY GLY A . n A 1 34 LYS 34 56 56 LYS LYS A . n A 1 35 CYS 35 57 57 CYS CYS A . n A 1 36 LEU 36 58 58 LEU LEU A . n A 1 37 GLY 37 59 59 GLY GLY A . n A 1 38 SER 38 60 60 SER SER A . n A 1 39 CYS 39 61 61 CYS CYS A . n A 1 40 LYS 40 62 62 LYS LYS A . n A 1 41 THR 41 63 63 THR THR A . n A 1 42 ARG 42 64 64 ARG ARG A . n A 1 43 PHE 43 65 65 PHE PHE A . n A 1 44 ARG 44 66 66 ARG ARG A . n A 1 45 VAL 45 67 67 VAL VAL A . n A 1 46 CYS 46 68 68 CYS CYS A . n A 1 47 LEU 47 69 69 LEU LEU A . n A 1 48 LYS 48 70 70 LYS LYS A . n A 1 49 HIS 49 71 71 HIS HIS A . n A 1 50 TYR 50 72 72 TYR TYR A . n A 1 51 GLN 51 73 73 GLN GLN A . n A 1 52 ALA 52 74 74 ALA ALA A . n A 1 53 THR 53 75 75 THR THR A . n A 1 54 ILE 54 76 76 ILE ILE A . n A 1 55 ASP 55 77 77 ASP ASP A . n A 1 56 THR 56 78 78 THR THR A . n A 1 57 THR 57 79 79 THR THR A . n A 1 58 SER 58 80 80 SER SER A . n A 1 59 GLN 59 81 81 GLN GLN A . n A 1 60 CYS 60 82 82 CYS CYS A . n A 1 61 THR 61 83 83 THR THR A . n A 1 62 TYR 62 84 84 TYR TYR A . n A 1 63 GLY 63 85 85 GLY GLY A . n A 1 64 ASP 64 86 86 ASP ASP A . n A 1 65 VAL 65 87 87 VAL VAL A . n A 1 66 ILE 66 88 88 ILE ILE A . n A 1 67 THR 67 89 89 THR THR A . n A 1 68 PRO 68 90 90 PRO PRO A . n A 1 69 ILE 69 91 91 ILE ILE A . n A 1 70 LEU 70 92 92 LEU LEU A . n A 1 71 GLY 71 93 93 GLY GLY A . n A 1 72 GLU 72 94 94 GLU GLU A . n A 1 73 ASN 73 95 95 ASN ASN A . n A 1 74 SER 74 96 96 SER SER A . n A 1 75 VAL 75 97 97 VAL VAL A . n A 1 76 ASN 76 98 98 ASN ASN A . n A 1 77 LEU 77 99 99 LEU LEU A . n A 1 78 THR 78 100 100 THR THR A . n A 1 79 ASP 79 101 ? ? ? A . n A 1 80 ALA 80 102 ? ? ? A . n A 1 81 GLN 81 103 ? ? ? A . n A 1 82 ARG 82 104 ? ? ? A . n A 1 83 PHE 83 105 ? ? ? A . n A 1 84 GLN 84 106 106 GLN GLN A . n A 1 85 ASN 85 107 107 ASN ASN A . n A 1 86 LYS 86 108 108 LYS LYS A . n A 1 87 GLY 87 109 109 GLY GLY A . n A 1 88 PHE 88 110 110 PHE PHE A . n A 1 89 THR 89 111 111 THR THR A . n A 1 90 ASN 90 112 112 ASN ASN A . n A 1 91 PRO 91 113 113 PRO PRO A . n A 1 92 ILE 92 114 114 ILE ILE A . n A 1 93 GLN 93 115 115 GLN GLN A . n A 1 94 PHE 94 116 116 PHE PHE A . n A 1 95 PRO 95 117 117 PRO PRO A . n A 1 96 PHE 96 118 118 PHE PHE A . n A 1 97 SER 97 119 119 SER SER A . n A 1 98 PHE 98 120 120 PHE PHE A . n A 1 99 SER 99 121 121 SER SER A . n A 1 100 TRP 100 122 122 TRP TRP A . n A 1 101 PRO 101 123 123 PRO PRO A . n A 1 102 GLY 102 124 124 GLY GLY A . n A 1 103 THR 103 125 125 THR THR A . n A 1 104 PHE 104 126 126 PHE PHE A . n A 1 105 SER 105 127 127 SER SER A . n A 1 106 LEU 106 128 128 LEU LEU A . n A 1 107 ILE 107 129 129 ILE ILE A . n A 1 108 VAL 108 130 130 VAL VAL A . n A 1 109 GLU 109 131 131 GLU GLU A . n A 1 110 ALA 110 132 132 ALA ALA A . n A 1 111 TRP 111 133 133 TRP TRP A . n A 1 112 HIS 112 134 134 HIS HIS A . n A 1 113 ASP 113 135 135 ASP ASP A . n A 1 114 THR 114 136 136 THR THR A . n A 1 115 ASN 115 137 137 ASN ASN A . n A 1 116 ASN 116 138 138 ASN ASN A . n A 1 117 SER 117 139 139 SER SER A . n A 1 118 GLY 118 140 140 GLY GLY A . n A 1 119 ASN 119 141 141 ASN ASN A . n A 1 120 ALA 120 142 142 ALA ALA A . n A 1 121 ARG 121 143 143 ARG ARG A . n A 1 122 THR 122 144 144 THR THR A . n A 1 123 ASN 123 145 145 ASN ASN A . n A 1 124 LYS 124 146 146 LYS LYS A . n A 1 125 LEU 125 147 147 LEU LEU A . n A 1 126 LEU 126 148 148 LEU LEU A . n A 1 127 ILE 127 149 149 ILE ILE A . n A 1 128 GLN 128 150 150 GLN GLN A . n A 1 129 ARG 129 151 151 ARG ARG A . n A 1 130 LEU 130 152 152 LEU LEU A . n A 1 131 LEU 131 153 153 LEU LEU A . n A 1 132 VAL 132 154 154 VAL VAL A . n A 1 133 GLN 133 155 155 GLN GLN A . n A 1 134 GLN 134 156 156 GLN GLN A . n A 1 135 VAL 135 157 157 VAL VAL A . n A 1 136 LEU 136 158 158 LEU LEU A . n A 1 137 GLU 137 159 159 GLU GLU A . n A 1 138 VAL 138 160 160 VAL VAL A . n A 1 139 SER 139 161 161 SER SER A . n A 1 140 SER 140 162 162 SER SER A . n A 1 141 GLU 141 163 163 GLU GLU A . n A 1 142 TRP 142 164 164 TRP TRP A . n A 1 143 LYS 143 165 165 LYS LYS A . n A 1 144 THR 144 166 166 THR THR A . n A 1 145 ASN 145 167 167 ASN ASN A . n A 1 146 LYS 146 168 168 LYS LYS A . n A 1 147 SER 147 169 169 SER SER A . n A 1 148 GLU 148 170 170 GLU GLU A . n A 1 149 SER 149 171 171 SER SER A . n A 1 150 GLN 150 172 172 GLN GLN A . n A 1 151 TYR 151 173 173 TYR TYR A . n A 1 152 THR 152 174 174 THR THR A . n A 1 153 SER 153 175 175 SER SER A . n A 1 154 LEU 154 176 176 LEU LEU A . n A 1 155 GLU 155 177 177 GLU GLU A . n A 1 156 TYR 156 178 178 TYR TYR A . n A 1 157 ASP 157 179 179 ASP ASP A . n A 1 158 PHE 158 180 180 PHE PHE A . n A 1 159 ARG 159 181 181 ARG ARG A . n A 1 160 VAL 160 182 182 VAL VAL A . n A 1 161 THR 161 183 183 THR THR A . n A 1 162 CYS 162 184 184 CYS CYS A . n A 1 163 ASP 163 185 185 ASP ASP A . n A 1 164 LEU 164 186 186 LEU LEU A . n A 1 165 ASN 165 187 187 ASN ASN A . n A 1 166 TYR 166 188 188 TYR TYR A . n A 1 167 TYR 167 189 189 TYR TYR A . n A 1 168 GLY 168 190 190 GLY GLY A . n A 1 169 SER 169 191 191 SER SER A . n A 1 170 GLY 170 192 192 GLY GLY A . n A 1 171 CYS 171 193 193 CYS CYS A . n A 1 172 ALA 172 194 194 ALA ALA A . n A 1 173 LYS 173 195 195 LYS LYS A . n A 1 174 PHE 174 196 196 PHE PHE A . n A 1 175 CYS 175 197 197 CYS CYS A . n A 1 176 ARG 176 198 198 ARG ARG A . n A 1 177 PRO 177 199 199 PRO PRO A . n A 1 178 ARG 178 200 200 ARG ARG A . n A 1 179 ASP 179 201 201 ASP ASP A . n A 1 180 ASP 180 202 202 ASP ASP A . n A 1 181 SER 181 203 203 SER SER A . n A 1 182 PHE 182 204 204 PHE PHE A . n A 1 183 GLY 183 205 205 GLY GLY A . n A 1 184 HIS 184 206 206 HIS HIS A . n A 1 185 SER 185 207 207 SER SER A . n A 1 186 THR 186 208 208 THR THR A . n A 1 187 CYS 187 209 209 CYS CYS A . n A 1 188 SER 188 210 210 SER SER A . n A 1 189 GLU 189 211 211 GLU GLU A . n A 1 190 THR 190 212 212 THR THR A . n A 1 191 GLY 191 213 213 GLY GLY A . n A 1 192 GLU 192 214 214 GLU GLU A . n A 1 193 ILE 193 215 215 ILE ILE A . n A 1 194 ILE 194 216 216 ILE ILE A . n A 1 195 CYS 195 217 217 CYS CYS A . n A 1 196 LEU 196 218 218 LEU LEU A . n A 1 197 THR 197 219 219 THR THR A . n A 1 198 GLY 198 220 220 GLY GLY A . n A 1 199 TRP 199 221 221 TRP TRP A . n A 1 200 GLN 200 222 222 GLN GLN A . n A 1 201 GLY 201 223 223 GLY GLY A . n A 1 202 ASP 202 224 224 ASP ASP A . n A 1 203 TYR 203 225 225 TYR TYR A . n A 1 204 CYS 204 226 226 CYS CYS A . n A 1 205 HIS 205 227 227 HIS HIS A . n A 1 206 ILE 206 228 228 ILE ILE A . n A 1 207 PRO 207 229 229 PRO PRO A . n A 1 208 LYS 208 230 230 LYS LYS A . n A 1 209 CYS 209 231 231 CYS CYS A . n A 1 210 ALA 210 232 232 ALA ALA A . n A 1 211 LYS 211 233 233 LYS LYS A . n A 1 212 GLY 212 234 234 GLY GLY A . n A 1 213 CYS 213 235 235 CYS CYS A . n A 1 214 GLU 214 236 236 GLU GLU A . n A 1 215 HIS 215 237 237 HIS HIS A . n A 1 216 GLY 216 238 238 GLY GLY A . n A 1 217 HIS 217 239 239 HIS HIS A . n A 1 218 CYS 218 240 240 CYS CYS A . n A 1 219 ASP 219 241 241 ASP ASP A . n A 1 220 LYS 220 242 242 LYS LYS A . n A 1 221 PRO 221 243 243 PRO PRO A . n A 1 222 ASN 222 244 244 ASN ASN A . n A 1 223 GLN 223 245 245 GLN GLN A . n A 1 224 CYS 224 246 246 CYS CYS A . n A 1 225 VAL 225 247 247 VAL VAL A . n A 1 226 CYS 226 248 248 CYS CYS A . n A 1 227 GLN 227 249 249 GLN GLN A . n A 1 228 LEU 228 250 250 LEU LEU A . n A 1 229 GLY 229 251 251 GLY GLY A . n A 1 230 TRP 230 252 252 TRP TRP A . n A 1 231 LYS 231 253 253 LYS LYS A . n A 1 232 GLY 232 254 254 GLY GLY A . n A 1 233 ALA 233 255 255 ALA ALA A . n A 1 234 LEU 234 256 256 LEU LEU A . n A 1 235 CYS 235 257 257 CYS CYS A . n A 1 236 ASN 236 258 258 ASN ASN A . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 1371 n B 2 NAG 2 B NAG 2 A NAG 1372 n B 2 BMA 3 B BMA 3 A BMA 1373 n B 2 MAN 4 B MAN 4 A MAN 1376 n B 2 MAN 5 B MAN 5 A MAN 1375 n B 2 FUC 6 B FUC 6 A FUC 1374 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG 1 301 981 NAG NAG A . D 3 NAG 1 302 1671 NAG NAG A . E 4 HOH 1 401 2 HOH HOH A . E 4 HOH 2 402 1 HOH HOH A . # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id SER _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 50 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id OG _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id SER _pdbx_unobs_or_zero_occ_atoms.label_seq_id 28 _pdbx_unobs_or_zero_occ_atoms.label_atom_id OG # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? dev_3965 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? dev_3965 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 94.271 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7ALK _cell.details ? _cell.formula_units_Z ? _cell.length_a 30.990 _cell.length_a_esd ? _cell.length_b 86.736 _cell.length_b_esd ? _cell.length_c 47.558 _cell.length_c_esd ? _cell.volume 127478.462 _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ALK _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7ALK _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.41 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 49.02 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1M Tris pH 8.5, 0.2M MgCl2, 30% PEG4K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-07-26 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 33.66 _reflns.entry_id 7ALK _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.0 _reflns.d_resolution_low 29.11 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 5066 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.84 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 4.55 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.952 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3.0 _reflns_shell.d_res_low 3.107 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 0.85 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 520 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.483 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 35.61 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7ALK _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.00 _refine.ls_d_res_low 29.11 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 5066 _refine.ls_number_reflns_R_free 287 _refine.ls_number_reflns_R_work 4779 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.94 _refine.ls_percent_reflns_R_free 5.67 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2437 _refine.ls_R_factor_R_free 0.2968 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2407 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5MVX _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 22.9094 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.5048 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 3.00 _refine_hist.d_res_low 29.11 _refine_hist.number_atoms_solvent 2 _refine_hist.number_atoms_total 1902 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1801 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 99 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0030 ? 1941 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.5829 ? 2624 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0526 ? 302 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0031 ? 330 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 14.9412 ? 310 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 3.00 3.78 . . 152 2361 99.88 . . . 0.3358 . 0.2784 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.78 29.11 . . 135 2418 100.00 . . . 0.2696 . 0.2160 . . . . . . . . . . . # _struct.entry_id 7ALK _struct.title 'Structure of Drosophila C2-DSL-EGF1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7ALK _struct_keywords.text 'Delta Notch Ligand C2, DSL and EGF domains, SIGNALING PROTEIN' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DL_DROME _struct_ref.pdbx_db_accession P10041 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SGSFELRLKYFSNDHGRDNEGRCCSGESDGATGKCLGSCKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDA QRFQNKGFTNPIQFPFSFSWPGTFSLIVEAWHDTNNSGNARTNKLLIQRLLVQQVLEVSSEWKTNKSESQYTSLEYDFRV TCDLNYYGSGCAKFCRPRDDSFGHSTCSETGEIICLTGWQGDYCHIPKCAKGCEHGHCDKPNQCVCQLGWKGALCN ; _struct_ref.pdbx_align_begin 23 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7ALK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 236 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P10041 _struct_ref_seq.db_align_beg 23 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 258 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 23 _struct_ref_seq.pdbx_auth_seq_align_end 258 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1760 ? 1 MORE 23 ? 1 'SSA (A^2)' 14640 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 35 SG ? ? A CYS 45 A CYS 57 1_555 ? ? ? ? ? ? ? 2.024 ? ? disulf2 disulf ? ? A CYS 24 SG ? ? ? 1_555 A CYS 39 SG ? ? A CYS 46 A CYS 61 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf3 disulf ? ? A CYS 46 SG ? ? ? 1_555 A CYS 60 SG ? ? A CYS 68 A CYS 82 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf4 disulf ? ? A CYS 162 SG ? ? ? 1_555 A CYS 171 SG ? ? A CYS 184 A CYS 193 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf5 disulf ? ? A CYS 175 SG ? ? ? 1_555 A CYS 187 SG ? ? A CYS 197 A CYS 209 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf6 disulf ? ? A CYS 195 SG ? ? ? 1_555 A CYS 204 SG ? ? A CYS 217 A CYS 226 1_555 ? ? ? ? ? ? ? 2.021 ? ? disulf7 disulf ? ? A CYS 209 SG ? ? ? 1_555 A CYS 218 SG ? ? A CYS 231 A CYS 240 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf8 disulf ? ? A CYS 213 SG ? ? ? 1_555 A CYS 224 SG ? ? A CYS 235 A CYS 246 1_555 ? ? ? ? ? ? ? 2.022 ? ? disulf9 disulf ? ? A CYS 226 SG ? ? ? 1_555 A CYS 235 SG ? ? A CYS 248 A CYS 257 1_555 ? ? ? ? ? ? ? 2.030 ? ? covale1 covale one ? A ASN 76 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 98 A NAG 301 1_555 ? ? ? ? ? ? ? 1.452 ? N-Glycosylation covale2 covale one ? A ASN 115 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 137 B NAG 1 1_555 ? ? ? ? ? ? ? 1.439 ? N-Glycosylation covale3 covale one ? A ASN 145 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 167 A NAG 302 1_555 ? ? ? ? ? ? ? 1.438 ? N-Glycosylation covale4 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.443 ? ? covale5 covale both ? B NAG . O6 ? ? ? 1_555 B FUC . C1 ? ? B NAG 1 B FUC 6 1_555 ? ? ? ? ? ? ? 1.449 ? ? covale6 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.439 ? ? covale7 covale both ? B BMA . O3 ? ? ? 1_555 B MAN . C1 ? ? B BMA 3 B MAN 4 1_555 ? ? ? ? ? ? ? 1.446 ? ? covale8 covale both ? B BMA . O6 ? ? ? 1_555 B MAN . C1 ? ? B BMA 3 B MAN 5 1_555 ? ? ? ? ? ? ? 1.447 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 90 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 112 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 91 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 113 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.97 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 4 ? AA3 ? 3 ? AA4 ? 4 ? AA5 ? 2 ? AA6 ? 3 ? AA7 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA7 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 75 ? ASN A 76 ? VAL A 97 ASN A 98 AA1 2 SER A 3 ? SER A 12 ? SER A 25 SER A 34 AA1 3 ILE A 92 ? PRO A 95 ? ILE A 114 PRO A 117 AA2 1 VAL A 75 ? ASN A 76 ? VAL A 97 ASN A 98 AA2 2 SER A 3 ? SER A 12 ? SER A 25 SER A 34 AA2 3 SER A 153 ? THR A 161 ? SER A 175 THR A 183 AA2 4 LYS A 143 ? GLU A 148 ? LYS A 165 GLU A 170 AA3 1 GLY A 63 ? ILE A 66 ? GLY A 85 ILE A 88 AA3 2 LYS A 40 ? LYS A 48 ? LYS A 62 LYS A 70 AA3 3 GLY A 71 ? GLU A 72 ? GLY A 93 GLU A 94 AA4 1 GLY A 63 ? ILE A 66 ? GLY A 85 ILE A 88 AA4 2 LYS A 40 ? LYS A 48 ? LYS A 62 LYS A 70 AA4 3 THR A 103 ? ASP A 113 ? THR A 125 ASP A 135 AA4 4 LYS A 124 ? VAL A 135 ? LYS A 146 VAL A 157 AA5 1 TYR A 166 ? TYR A 167 ? TYR A 188 TYR A 189 AA5 2 LYS A 173 ? PHE A 174 ? LYS A 195 PHE A 196 AA6 1 ARG A 178 ? ASP A 180 ? ARG A 200 ASP A 202 AA6 2 GLY A 183 ? CYS A 187 ? GLY A 205 CYS A 209 AA6 3 ILE A 193 ? CYS A 195 ? ILE A 215 CYS A 217 AA7 1 TRP A 199 ? GLN A 200 ? TRP A 221 GLN A 222 AA7 2 ILE A 206 ? PRO A 207 ? ILE A 228 PRO A 229 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O VAL A 75 ? O VAL A 97 N PHE A 11 ? N PHE A 33 AA1 2 3 N LEU A 6 ? N LEU A 28 O ILE A 92 ? O ILE A 114 AA2 1 2 O VAL A 75 ? O VAL A 97 N PHE A 11 ? N PHE A 33 AA2 2 3 N SER A 12 ? N SER A 34 O SER A 153 ? O SER A 175 AA2 3 4 O LEU A 154 ? O LEU A 176 N SER A 147 ? N SER A 169 AA3 1 2 O VAL A 65 ? O VAL A 87 N VAL A 45 ? N VAL A 67 AA3 2 3 N THR A 41 ? N THR A 63 O GLY A 71 ? O GLY A 93 AA4 1 2 O VAL A 65 ? O VAL A 87 N VAL A 45 ? N VAL A 67 AA4 2 3 N CYS A 46 ? N CYS A 68 O ILE A 107 ? O ILE A 129 AA4 3 4 N HIS A 112 ? N HIS A 134 O LEU A 125 ? O LEU A 147 AA5 1 2 N TYR A 167 ? N TYR A 189 O LYS A 173 ? O LYS A 195 AA6 1 2 N ARG A 178 ? N ARG A 200 O SER A 185 ? O SER A 207 AA6 2 3 N THR A 186 ? N THR A 208 O ILE A 194 ? O ILE A 216 AA7 1 2 N GLN A 200 ? N GLN A 222 O ILE A 206 ? O ILE A 228 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 35 ? ? -164.31 70.08 2 1 ARG A 44 ? ? -68.28 -178.09 3 1 SER A 50 ? ? -109.39 -159.46 4 1 THR A 54 ? ? 54.65 -104.62 5 1 SER A 60 ? ? 62.45 175.65 6 1 ASN A 95 ? ? 53.95 -121.10 7 1 ASN A 107 ? ? -136.44 -107.04 8 1 ASN A 137 ? ? -158.28 50.32 9 1 SER A 171 ? ? -99.74 -140.97 10 1 ASP A 201 ? ? -150.31 64.74 11 1 SER A 210 ? ? -84.37 -155.34 12 1 LYS A 233 ? ? -63.71 97.49 13 1 CYS A 235 ? ? 60.49 79.98 14 1 HIS A 237 ? ? 68.03 -43.28 15 1 LYS A 253 ? ? -122.11 -159.67 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -x,y+1/2,-z # _pdbx_entry_details.entry_id 7ALK _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 101 ? A ASP 79 2 1 Y 1 A ALA 102 ? A ALA 80 3 1 Y 1 A GLN 103 ? A GLN 81 4 1 Y 1 A ARG 104 ? A ARG 82 5 1 Y 1 A PHE 105 ? A PHE 83 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 FUC C1 C N R 112 FUC C2 C N S 113 FUC C3 C N R 114 FUC C4 C N S 115 FUC C5 C N S 116 FUC C6 C N N 117 FUC O1 O N N 118 FUC O2 O N N 119 FUC O3 O N N 120 FUC O4 O N N 121 FUC O5 O N N 122 FUC H1 H N N 123 FUC H2 H N N 124 FUC H3 H N N 125 FUC H4 H N N 126 FUC H5 H N N 127 FUC H61 H N N 128 FUC H62 H N N 129 FUC H63 H N N 130 FUC HO1 H N N 131 FUC HO2 H N N 132 FUC HO3 H N N 133 FUC HO4 H N N 134 GLN N N N N 135 GLN CA C N S 136 GLN C C N N 137 GLN O O N N 138 GLN CB C N N 139 GLN CG C N N 140 GLN CD C N N 141 GLN OE1 O N N 142 GLN NE2 N N N 143 GLN OXT O N N 144 GLN H H N N 145 GLN H2 H N N 146 GLN HA H N N 147 GLN HB2 H N N 148 GLN HB3 H N N 149 GLN HG2 H N N 150 GLN HG3 H N N 151 GLN HE21 H N N 152 GLN HE22 H N N 153 GLN HXT H N N 154 GLU N N N N 155 GLU CA C N S 156 GLU C C N N 157 GLU O O N N 158 GLU CB C N N 159 GLU CG C N N 160 GLU CD C N N 161 GLU OE1 O N N 162 GLU OE2 O N N 163 GLU OXT O N N 164 GLU H H N N 165 GLU H2 H N N 166 GLU HA H N N 167 GLU HB2 H N N 168 GLU HB3 H N N 169 GLU HG2 H N N 170 GLU HG3 H N N 171 GLU HE2 H N N 172 GLU HXT H N N 173 GLY N N N N 174 GLY CA C N N 175 GLY C C N N 176 GLY O O N N 177 GLY OXT O N N 178 GLY H H N N 179 GLY H2 H N N 180 GLY HA2 H N N 181 GLY HA3 H N N 182 GLY HXT H N N 183 HIS N N N N 184 HIS CA C N S 185 HIS C C N N 186 HIS O O N N 187 HIS CB C N N 188 HIS CG C Y N 189 HIS ND1 N Y N 190 HIS CD2 C Y N 191 HIS CE1 C Y N 192 HIS NE2 N Y N 193 HIS OXT O N N 194 HIS H H N N 195 HIS H2 H N N 196 HIS HA H N N 197 HIS HB2 H N N 198 HIS HB3 H N N 199 HIS HD1 H N N 200 HIS HD2 H N N 201 HIS HE1 H N N 202 HIS HE2 H N N 203 HIS HXT H N N 204 HOH O O N N 205 HOH H1 H N N 206 HOH H2 H N N 207 ILE N N N N 208 ILE CA C N S 209 ILE C C N N 210 ILE O O N N 211 ILE CB C N S 212 ILE CG1 C N N 213 ILE CG2 C N N 214 ILE CD1 C N N 215 ILE OXT O N N 216 ILE H H N N 217 ILE H2 H N N 218 ILE HA H N N 219 ILE HB H N N 220 ILE HG12 H N N 221 ILE HG13 H N N 222 ILE HG21 H N N 223 ILE HG22 H N N 224 ILE HG23 H N N 225 ILE HD11 H N N 226 ILE HD12 H N N 227 ILE HD13 H N N 228 ILE HXT H N N 229 LEU N N N N 230 LEU CA C N S 231 LEU C C N N 232 LEU O O N N 233 LEU CB C N N 234 LEU CG C N N 235 LEU CD1 C N N 236 LEU CD2 C N N 237 LEU OXT O N N 238 LEU H H N N 239 LEU H2 H N N 240 LEU HA H N N 241 LEU HB2 H N N 242 LEU HB3 H N N 243 LEU HG H N N 244 LEU HD11 H N N 245 LEU HD12 H N N 246 LEU HD13 H N N 247 LEU HD21 H N N 248 LEU HD22 H N N 249 LEU HD23 H N N 250 LEU HXT H N N 251 LYS N N N N 252 LYS CA C N S 253 LYS C C N N 254 LYS O O N N 255 LYS CB C N N 256 LYS CG C N N 257 LYS CD C N N 258 LYS CE C N N 259 LYS NZ N N N 260 LYS OXT O N N 261 LYS H H N N 262 LYS H2 H N N 263 LYS HA H N N 264 LYS HB2 H N N 265 LYS HB3 H N N 266 LYS HG2 H N N 267 LYS HG3 H N N 268 LYS HD2 H N N 269 LYS HD3 H N N 270 LYS HE2 H N N 271 LYS HE3 H N N 272 LYS HZ1 H N N 273 LYS HZ2 H N N 274 LYS HZ3 H N N 275 LYS HXT H N N 276 MAN C1 C N S 277 MAN C2 C N S 278 MAN C3 C N S 279 MAN C4 C N S 280 MAN C5 C N R 281 MAN C6 C N N 282 MAN O1 O N N 283 MAN O2 O N N 284 MAN O3 O N N 285 MAN O4 O N N 286 MAN O5 O N N 287 MAN O6 O N N 288 MAN H1 H N N 289 MAN H2 H N N 290 MAN H3 H N N 291 MAN H4 H N N 292 MAN H5 H N N 293 MAN H61 H N N 294 MAN H62 H N N 295 MAN HO1 H N N 296 MAN HO2 H N N 297 MAN HO3 H N N 298 MAN HO4 H N N 299 MAN HO6 H N N 300 NAG C1 C N R 301 NAG C2 C N R 302 NAG C3 C N R 303 NAG C4 C N S 304 NAG C5 C N R 305 NAG C6 C N N 306 NAG C7 C N N 307 NAG C8 C N N 308 NAG N2 N N N 309 NAG O1 O N N 310 NAG O3 O N N 311 NAG O4 O N N 312 NAG O5 O N N 313 NAG O6 O N N 314 NAG O7 O N N 315 NAG H1 H N N 316 NAG H2 H N N 317 NAG H3 H N N 318 NAG H4 H N N 319 NAG H5 H N N 320 NAG H61 H N N 321 NAG H62 H N N 322 NAG H81 H N N 323 NAG H82 H N N 324 NAG H83 H N N 325 NAG HN2 H N N 326 NAG HO1 H N N 327 NAG HO3 H N N 328 NAG HO4 H N N 329 NAG HO6 H N N 330 PHE N N N N 331 PHE CA C N S 332 PHE C C N N 333 PHE O O N N 334 PHE CB C N N 335 PHE CG C Y N 336 PHE CD1 C Y N 337 PHE CD2 C Y N 338 PHE CE1 C Y N 339 PHE CE2 C Y N 340 PHE CZ C Y N 341 PHE OXT O N N 342 PHE H H N N 343 PHE H2 H N N 344 PHE HA H N N 345 PHE HB2 H N N 346 PHE HB3 H N N 347 PHE HD1 H N N 348 PHE HD2 H N N 349 PHE HE1 H N N 350 PHE HE2 H N N 351 PHE HZ H N N 352 PHE HXT H N N 353 PRO N N N N 354 PRO CA C N S 355 PRO C C N N 356 PRO O O N N 357 PRO CB C N N 358 PRO CG C N N 359 PRO CD C N N 360 PRO OXT O N N 361 PRO H H N N 362 PRO HA H N N 363 PRO HB2 H N N 364 PRO HB3 H N N 365 PRO HG2 H N N 366 PRO HG3 H N N 367 PRO HD2 H N N 368 PRO HD3 H N N 369 PRO HXT H N N 370 SER N N N N 371 SER CA C N S 372 SER C C N N 373 SER O O N N 374 SER CB C N N 375 SER OG O N N 376 SER OXT O N N 377 SER H H N N 378 SER H2 H N N 379 SER HA H N N 380 SER HB2 H N N 381 SER HB3 H N N 382 SER HG H N N 383 SER HXT H N N 384 THR N N N N 385 THR CA C N S 386 THR C C N N 387 THR O O N N 388 THR CB C N R 389 THR OG1 O N N 390 THR CG2 C N N 391 THR OXT O N N 392 THR H H N N 393 THR H2 H N N 394 THR HA H N N 395 THR HB H N N 396 THR HG1 H N N 397 THR HG21 H N N 398 THR HG22 H N N 399 THR HG23 H N N 400 THR HXT H N N 401 TRP N N N N 402 TRP CA C N S 403 TRP C C N N 404 TRP O O N N 405 TRP CB C N N 406 TRP CG C Y N 407 TRP CD1 C Y N 408 TRP CD2 C Y N 409 TRP NE1 N Y N 410 TRP CE2 C Y N 411 TRP CE3 C Y N 412 TRP CZ2 C Y N 413 TRP CZ3 C Y N 414 TRP CH2 C Y N 415 TRP OXT O N N 416 TRP H H N N 417 TRP H2 H N N 418 TRP HA H N N 419 TRP HB2 H N N 420 TRP HB3 H N N 421 TRP HD1 H N N 422 TRP HE1 H N N 423 TRP HE3 H N N 424 TRP HZ2 H N N 425 TRP HZ3 H N N 426 TRP HH2 H N N 427 TRP HXT H N N 428 TYR N N N N 429 TYR CA C N S 430 TYR C C N N 431 TYR O O N N 432 TYR CB C N N 433 TYR CG C Y N 434 TYR CD1 C Y N 435 TYR CD2 C Y N 436 TYR CE1 C Y N 437 TYR CE2 C Y N 438 TYR CZ C Y N 439 TYR OH O N N 440 TYR OXT O N N 441 TYR H H N N 442 TYR H2 H N N 443 TYR HA H N N 444 TYR HB2 H N N 445 TYR HB3 H N N 446 TYR HD1 H N N 447 TYR HD2 H N N 448 TYR HE1 H N N 449 TYR HE2 H N N 450 TYR HH H N N 451 TYR HXT H N N 452 VAL N N N N 453 VAL CA C N S 454 VAL C C N N 455 VAL O O N N 456 VAL CB C N N 457 VAL CG1 C N N 458 VAL CG2 C N N 459 VAL OXT O N N 460 VAL H H N N 461 VAL H2 H N N 462 VAL HA H N N 463 VAL HB H N N 464 VAL HG11 H N N 465 VAL HG12 H N N 466 VAL HG13 H N N 467 VAL HG21 H N N 468 VAL HG22 H N N 469 VAL HG23 H N N 470 VAL HXT H N N 471 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 FUC C1 C2 sing N N 107 FUC C1 O1 sing N N 108 FUC C1 O5 sing N N 109 FUC C1 H1 sing N N 110 FUC C2 C3 sing N N 111 FUC C2 O2 sing N N 112 FUC C2 H2 sing N N 113 FUC C3 C4 sing N N 114 FUC C3 O3 sing N N 115 FUC C3 H3 sing N N 116 FUC C4 C5 sing N N 117 FUC C4 O4 sing N N 118 FUC C4 H4 sing N N 119 FUC C5 C6 sing N N 120 FUC C5 O5 sing N N 121 FUC C5 H5 sing N N 122 FUC C6 H61 sing N N 123 FUC C6 H62 sing N N 124 FUC C6 H63 sing N N 125 FUC O1 HO1 sing N N 126 FUC O2 HO2 sing N N 127 FUC O3 HO3 sing N N 128 FUC O4 HO4 sing N N 129 GLN N CA sing N N 130 GLN N H sing N N 131 GLN N H2 sing N N 132 GLN CA C sing N N 133 GLN CA CB sing N N 134 GLN CA HA sing N N 135 GLN C O doub N N 136 GLN C OXT sing N N 137 GLN CB CG sing N N 138 GLN CB HB2 sing N N 139 GLN CB HB3 sing N N 140 GLN CG CD sing N N 141 GLN CG HG2 sing N N 142 GLN CG HG3 sing N N 143 GLN CD OE1 doub N N 144 GLN CD NE2 sing N N 145 GLN NE2 HE21 sing N N 146 GLN NE2 HE22 sing N N 147 GLN OXT HXT sing N N 148 GLU N CA sing N N 149 GLU N H sing N N 150 GLU N H2 sing N N 151 GLU CA C sing N N 152 GLU CA CB sing N N 153 GLU CA HA sing N N 154 GLU C O doub N N 155 GLU C OXT sing N N 156 GLU CB CG sing N N 157 GLU CB HB2 sing N N 158 GLU CB HB3 sing N N 159 GLU CG CD sing N N 160 GLU CG HG2 sing N N 161 GLU CG HG3 sing N N 162 GLU CD OE1 doub N N 163 GLU CD OE2 sing N N 164 GLU OE2 HE2 sing N N 165 GLU OXT HXT sing N N 166 GLY N CA sing N N 167 GLY N H sing N N 168 GLY N H2 sing N N 169 GLY CA C sing N N 170 GLY CA HA2 sing N N 171 GLY CA HA3 sing N N 172 GLY C O doub N N 173 GLY C OXT sing N N 174 GLY OXT HXT sing N N 175 HIS N CA sing N N 176 HIS N H sing N N 177 HIS N H2 sing N N 178 HIS CA C sing N N 179 HIS CA CB sing N N 180 HIS CA HA sing N N 181 HIS C O doub N N 182 HIS C OXT sing N N 183 HIS CB CG sing N N 184 HIS CB HB2 sing N N 185 HIS CB HB3 sing N N 186 HIS CG ND1 sing Y N 187 HIS CG CD2 doub Y N 188 HIS ND1 CE1 doub Y N 189 HIS ND1 HD1 sing N N 190 HIS CD2 NE2 sing Y N 191 HIS CD2 HD2 sing N N 192 HIS CE1 NE2 sing Y N 193 HIS CE1 HE1 sing N N 194 HIS NE2 HE2 sing N N 195 HIS OXT HXT sing N N 196 HOH O H1 sing N N 197 HOH O H2 sing N N 198 ILE N CA sing N N 199 ILE N H sing N N 200 ILE N H2 sing N N 201 ILE CA C sing N N 202 ILE CA CB sing N N 203 ILE CA HA sing N N 204 ILE C O doub N N 205 ILE C OXT sing N N 206 ILE CB CG1 sing N N 207 ILE CB CG2 sing N N 208 ILE CB HB sing N N 209 ILE CG1 CD1 sing N N 210 ILE CG1 HG12 sing N N 211 ILE CG1 HG13 sing N N 212 ILE CG2 HG21 sing N N 213 ILE CG2 HG22 sing N N 214 ILE CG2 HG23 sing N N 215 ILE CD1 HD11 sing N N 216 ILE CD1 HD12 sing N N 217 ILE CD1 HD13 sing N N 218 ILE OXT HXT sing N N 219 LEU N CA sing N N 220 LEU N H sing N N 221 LEU N H2 sing N N 222 LEU CA C sing N N 223 LEU CA CB sing N N 224 LEU CA HA sing N N 225 LEU C O doub N N 226 LEU C OXT sing N N 227 LEU CB CG sing N N 228 LEU CB HB2 sing N N 229 LEU CB HB3 sing N N 230 LEU CG CD1 sing N N 231 LEU CG CD2 sing N N 232 LEU CG HG sing N N 233 LEU CD1 HD11 sing N N 234 LEU CD1 HD12 sing N N 235 LEU CD1 HD13 sing N N 236 LEU CD2 HD21 sing N N 237 LEU CD2 HD22 sing N N 238 LEU CD2 HD23 sing N N 239 LEU OXT HXT sing N N 240 LYS N CA sing N N 241 LYS N H sing N N 242 LYS N H2 sing N N 243 LYS CA C sing N N 244 LYS CA CB sing N N 245 LYS CA HA sing N N 246 LYS C O doub N N 247 LYS C OXT sing N N 248 LYS CB CG sing N N 249 LYS CB HB2 sing N N 250 LYS CB HB3 sing N N 251 LYS CG CD sing N N 252 LYS CG HG2 sing N N 253 LYS CG HG3 sing N N 254 LYS CD CE sing N N 255 LYS CD HD2 sing N N 256 LYS CD HD3 sing N N 257 LYS CE NZ sing N N 258 LYS CE HE2 sing N N 259 LYS CE HE3 sing N N 260 LYS NZ HZ1 sing N N 261 LYS NZ HZ2 sing N N 262 LYS NZ HZ3 sing N N 263 LYS OXT HXT sing N N 264 MAN C1 C2 sing N N 265 MAN C1 O1 sing N N 266 MAN C1 O5 sing N N 267 MAN C1 H1 sing N N 268 MAN C2 C3 sing N N 269 MAN C2 O2 sing N N 270 MAN C2 H2 sing N N 271 MAN C3 C4 sing N N 272 MAN C3 O3 sing N N 273 MAN C3 H3 sing N N 274 MAN C4 C5 sing N N 275 MAN C4 O4 sing N N 276 MAN C4 H4 sing N N 277 MAN C5 C6 sing N N 278 MAN C5 O5 sing N N 279 MAN C5 H5 sing N N 280 MAN C6 O6 sing N N 281 MAN C6 H61 sing N N 282 MAN C6 H62 sing N N 283 MAN O1 HO1 sing N N 284 MAN O2 HO2 sing N N 285 MAN O3 HO3 sing N N 286 MAN O4 HO4 sing N N 287 MAN O6 HO6 sing N N 288 NAG C1 C2 sing N N 289 NAG C1 O1 sing N N 290 NAG C1 O5 sing N N 291 NAG C1 H1 sing N N 292 NAG C2 C3 sing N N 293 NAG C2 N2 sing N N 294 NAG C2 H2 sing N N 295 NAG C3 C4 sing N N 296 NAG C3 O3 sing N N 297 NAG C3 H3 sing N N 298 NAG C4 C5 sing N N 299 NAG C4 O4 sing N N 300 NAG C4 H4 sing N N 301 NAG C5 C6 sing N N 302 NAG C5 O5 sing N N 303 NAG C5 H5 sing N N 304 NAG C6 O6 sing N N 305 NAG C6 H61 sing N N 306 NAG C6 H62 sing N N 307 NAG C7 C8 sing N N 308 NAG C7 N2 sing N N 309 NAG C7 O7 doub N N 310 NAG C8 H81 sing N N 311 NAG C8 H82 sing N N 312 NAG C8 H83 sing N N 313 NAG N2 HN2 sing N N 314 NAG O1 HO1 sing N N 315 NAG O3 HO3 sing N N 316 NAG O4 HO4 sing N N 317 NAG O6 HO6 sing N N 318 PHE N CA sing N N 319 PHE N H sing N N 320 PHE N H2 sing N N 321 PHE CA C sing N N 322 PHE CA CB sing N N 323 PHE CA HA sing N N 324 PHE C O doub N N 325 PHE C OXT sing N N 326 PHE CB CG sing N N 327 PHE CB HB2 sing N N 328 PHE CB HB3 sing N N 329 PHE CG CD1 doub Y N 330 PHE CG CD2 sing Y N 331 PHE CD1 CE1 sing Y N 332 PHE CD1 HD1 sing N N 333 PHE CD2 CE2 doub Y N 334 PHE CD2 HD2 sing N N 335 PHE CE1 CZ doub Y N 336 PHE CE1 HE1 sing N N 337 PHE CE2 CZ sing Y N 338 PHE CE2 HE2 sing N N 339 PHE CZ HZ sing N N 340 PHE OXT HXT sing N N 341 PRO N CA sing N N 342 PRO N CD sing N N 343 PRO N H sing N N 344 PRO CA C sing N N 345 PRO CA CB sing N N 346 PRO CA HA sing N N 347 PRO C O doub N N 348 PRO C OXT sing N N 349 PRO CB CG sing N N 350 PRO CB HB2 sing N N 351 PRO CB HB3 sing N N 352 PRO CG CD sing N N 353 PRO CG HG2 sing N N 354 PRO CG HG3 sing N N 355 PRO CD HD2 sing N N 356 PRO CD HD3 sing N N 357 PRO OXT HXT sing N N 358 SER N CA sing N N 359 SER N H sing N N 360 SER N H2 sing N N 361 SER CA C sing N N 362 SER CA CB sing N N 363 SER CA HA sing N N 364 SER C O doub N N 365 SER C OXT sing N N 366 SER CB OG sing N N 367 SER CB HB2 sing N N 368 SER CB HB3 sing N N 369 SER OG HG sing N N 370 SER OXT HXT sing N N 371 THR N CA sing N N 372 THR N H sing N N 373 THR N H2 sing N N 374 THR CA C sing N N 375 THR CA CB sing N N 376 THR CA HA sing N N 377 THR C O doub N N 378 THR C OXT sing N N 379 THR CB OG1 sing N N 380 THR CB CG2 sing N N 381 THR CB HB sing N N 382 THR OG1 HG1 sing N N 383 THR CG2 HG21 sing N N 384 THR CG2 HG22 sing N N 385 THR CG2 HG23 sing N N 386 THR OXT HXT sing N N 387 TRP N CA sing N N 388 TRP N H sing N N 389 TRP N H2 sing N N 390 TRP CA C sing N N 391 TRP CA CB sing N N 392 TRP CA HA sing N N 393 TRP C O doub N N 394 TRP C OXT sing N N 395 TRP CB CG sing N N 396 TRP CB HB2 sing N N 397 TRP CB HB3 sing N N 398 TRP CG CD1 doub Y N 399 TRP CG CD2 sing Y N 400 TRP CD1 NE1 sing Y N 401 TRP CD1 HD1 sing N N 402 TRP CD2 CE2 doub Y N 403 TRP CD2 CE3 sing Y N 404 TRP NE1 CE2 sing Y N 405 TRP NE1 HE1 sing N N 406 TRP CE2 CZ2 sing Y N 407 TRP CE3 CZ3 doub Y N 408 TRP CE3 HE3 sing N N 409 TRP CZ2 CH2 doub Y N 410 TRP CZ2 HZ2 sing N N 411 TRP CZ3 CH2 sing Y N 412 TRP CZ3 HZ3 sing N N 413 TRP CH2 HH2 sing N N 414 TRP OXT HXT sing N N 415 TYR N CA sing N N 416 TYR N H sing N N 417 TYR N H2 sing N N 418 TYR CA C sing N N 419 TYR CA CB sing N N 420 TYR CA HA sing N N 421 TYR C O doub N N 422 TYR C OXT sing N N 423 TYR CB CG sing N N 424 TYR CB HB2 sing N N 425 TYR CB HB3 sing N N 426 TYR CG CD1 doub Y N 427 TYR CG CD2 sing Y N 428 TYR CD1 CE1 sing Y N 429 TYR CD1 HD1 sing N N 430 TYR CD2 CE2 doub Y N 431 TYR CD2 HD2 sing N N 432 TYR CE1 CZ doub Y N 433 TYR CE1 HE1 sing N N 434 TYR CE2 CZ sing Y N 435 TYR CE2 HE2 sing N N 436 TYR CZ OH sing N N 437 TYR OH HH sing N N 438 TYR OXT HXT sing N N 439 VAL N CA sing N N 440 VAL N H sing N N 441 VAL N H2 sing N N 442 VAL CA C sing N N 443 VAL CA CB sing N N 444 VAL CA HA sing N N 445 VAL C O doub N N 446 VAL C OXT sing N N 447 VAL CB CG1 sing N N 448 VAL CB CG2 sing N N 449 VAL CB HB sing N N 450 VAL CG1 HG11 sing N N 451 VAL CG1 HG12 sing N N 452 VAL CG1 HG13 sing N N 453 VAL CG2 HG21 sing N N 454 VAL CG2 HG22 sing N N 455 VAL CG2 HG23 sing N N 456 VAL OXT HXT sing N N 457 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Medical Research Council (MRC, United Kingdom)' 'United Kingdom' MR/L001187/1 1 'Medical Research Council (MRC, United Kingdom)' 'United Kingdom' MR-R009317/1 2 'Wellcome Trust' 'United Kingdom' 100298 3 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 2 MAN 4 n 2 MAN 5 n 2 FUC 6 n # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5MVX _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'P 1 21 1' _space_group.name_Hall 'P 2yb' _space_group.IT_number 4 _space_group.crystal_system monoclinic _space_group.id 1 # _atom_sites.entry_id 7ALK _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.032268 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002410 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011529 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021086 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 6.96715 ? ? ? 11.43723 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O1- ? ? 5.12366 3.84317 ? ? 3.49406 27.47979 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_