data_7BF4 # _entry.id 7BF4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.384 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7BF4 pdb_00007bf4 10.2210/pdb7bf4/pdb WWPDB D_1292113246 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-01-13 2 'Structure model' 1 1 2021-07-07 3 'Structure model' 1 2 2024-01-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 3 'Structure model' '_database_2.pdbx_DOI' 13 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7BF4 _pdbx_database_status.recvd_initial_deposition_date 2020-12-31 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ni, X.' 1 ? 'Knapp, S.' 2 ? 'Chaikuad, A.' 3 ? 'Structural Genomics Consortium' 4 ? 'Structural Genomics Consortium (SGC)' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acs Med.Chem.Lett.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1948-5875 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 12 _citation.language ? _citation.page_first 603 _citation.page_last 609 _citation.title 'Structural Insights into Plasticity and Discovery of Remdesivir Metabolite GS-441524 Binding in SARS-CoV-2 Macrodomain.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acsmedchemlett.0c00684 _citation.pdbx_database_id_PubMed 33850605 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ni, X.' 1 ? primary 'Schroder, M.' 2 ? primary 'Olieric, V.' 3 ? primary 'Sharpe, M.E.' 4 ? primary 'Hernandez-Olmos, V.' 5 ? primary 'Proschak, E.' 6 ? primary 'Merk, D.' 7 ? primary 'Knapp, S.' 8 ? primary 'Chaikuad, A.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'NSP3 macrodomain' 18676.373 1 3.4.19.12,3.4.22.-,3.4.22.69,2.7.7.48,3.6.4.12,3.6.4.13,3.1.13.-,3.1.-.-,2.1.1.- ? ? ? 2 non-polymer syn "GUANOSINE-5'-MONOPHOSPHATE" 363.221 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 9 ? ? ? ? 4 water nat water 18.015 205 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'pp1ab,ORF1ab polyprotein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GHMVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGG SCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKN LYDKLVSSFLEMK ; _entity_poly.pdbx_seq_one_letter_code_can ;GHMVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGG SCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKN LYDKLVSSFLEMK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-MONOPHOSPHATE" 5GP 3 1,2-ETHANEDIOL EDO 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MET n 1 4 VAL n 1 5 ASN n 1 6 SER n 1 7 PHE n 1 8 SER n 1 9 GLY n 1 10 TYR n 1 11 LEU n 1 12 LYS n 1 13 LEU n 1 14 THR n 1 15 ASP n 1 16 ASN n 1 17 VAL n 1 18 TYR n 1 19 ILE n 1 20 LYS n 1 21 ASN n 1 22 ALA n 1 23 ASP n 1 24 ILE n 1 25 VAL n 1 26 GLU n 1 27 GLU n 1 28 ALA n 1 29 LYS n 1 30 LYS n 1 31 VAL n 1 32 LYS n 1 33 PRO n 1 34 THR n 1 35 VAL n 1 36 VAL n 1 37 VAL n 1 38 ASN n 1 39 ALA n 1 40 ALA n 1 41 ASN n 1 42 VAL n 1 43 TYR n 1 44 LEU n 1 45 LYS n 1 46 HIS n 1 47 GLY n 1 48 GLY n 1 49 GLY n 1 50 VAL n 1 51 ALA n 1 52 GLY n 1 53 ALA n 1 54 LEU n 1 55 ASN n 1 56 LYS n 1 57 ALA n 1 58 THR n 1 59 ASN n 1 60 ASN n 1 61 ALA n 1 62 MET n 1 63 GLN n 1 64 VAL n 1 65 GLU n 1 66 SER n 1 67 ASP n 1 68 ASP n 1 69 TYR n 1 70 ILE n 1 71 ALA n 1 72 THR n 1 73 ASN n 1 74 GLY n 1 75 PRO n 1 76 LEU n 1 77 LYS n 1 78 VAL n 1 79 GLY n 1 80 GLY n 1 81 SER n 1 82 CYS n 1 83 VAL n 1 84 LEU n 1 85 SER n 1 86 GLY n 1 87 HIS n 1 88 ASN n 1 89 LEU n 1 90 ALA n 1 91 LYS n 1 92 HIS n 1 93 CYS n 1 94 LEU n 1 95 HIS n 1 96 VAL n 1 97 VAL n 1 98 GLY n 1 99 PRO n 1 100 ASN n 1 101 VAL n 1 102 ASN n 1 103 LYS n 1 104 GLY n 1 105 GLU n 1 106 ASP n 1 107 ILE n 1 108 GLN n 1 109 LEU n 1 110 LEU n 1 111 LYS n 1 112 SER n 1 113 ALA n 1 114 TYR n 1 115 GLU n 1 116 ASN n 1 117 PHE n 1 118 ASN n 1 119 GLN n 1 120 HIS n 1 121 GLU n 1 122 VAL n 1 123 LEU n 1 124 LEU n 1 125 ALA n 1 126 PRO n 1 127 LEU n 1 128 LEU n 1 129 SER n 1 130 ALA n 1 131 GLY n 1 132 ILE n 1 133 PHE n 1 134 GLY n 1 135 ALA n 1 136 ASP n 1 137 PRO n 1 138 ILE n 1 139 HIS n 1 140 SER n 1 141 LEU n 1 142 ARG n 1 143 VAL n 1 144 CYS n 1 145 VAL n 1 146 ASP n 1 147 THR n 1 148 VAL n 1 149 ARG n 1 150 THR n 1 151 ASN n 1 152 VAL n 1 153 TYR n 1 154 LEU n 1 155 ALA n 1 156 VAL n 1 157 PHE n 1 158 ASP n 1 159 LYS n 1 160 ASN n 1 161 LEU n 1 162 TYR n 1 163 ASP n 1 164 LYS n 1 165 LEU n 1 166 VAL n 1 167 SER n 1 168 SER n 1 169 PHE n 1 170 LEU n 1 171 GLU n 1 172 MET n 1 173 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 173 _entity_src_gen.gene_src_common_name 2019-nCoV _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'rep, 1a-1b' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Severe acute respiratory syndrome coronavirus 2' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2697049 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant -R3-pRARE2 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5GP non-polymer . "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 HIS 2 1 ? ? ? A . n A 1 3 MET 3 2 2 MET MET A . n A 1 4 VAL 4 3 3 VAL VAL A . n A 1 5 ASN 5 4 4 ASN ASN A . n A 1 6 SER 6 5 5 SER SER A . n A 1 7 PHE 7 6 6 PHE PHE A . n A 1 8 SER 8 7 7 SER SER A . n A 1 9 GLY 9 8 8 GLY GLY A . n A 1 10 TYR 10 9 9 TYR TYR A . n A 1 11 LEU 11 10 10 LEU LEU A . n A 1 12 LYS 12 11 11 LYS LYS A . n A 1 13 LEU 13 12 12 LEU LEU A . n A 1 14 THR 14 13 13 THR THR A . n A 1 15 ASP 15 14 14 ASP ASP A . n A 1 16 ASN 16 15 15 ASN ASN A . n A 1 17 VAL 17 16 16 VAL VAL A . n A 1 18 TYR 18 17 17 TYR TYR A . n A 1 19 ILE 19 18 18 ILE ILE A . n A 1 20 LYS 20 19 19 LYS LYS A . n A 1 21 ASN 21 20 20 ASN ASN A . n A 1 22 ALA 22 21 21 ALA ALA A . n A 1 23 ASP 23 22 22 ASP ASP A . n A 1 24 ILE 24 23 23 ILE ILE A . n A 1 25 VAL 25 24 24 VAL VAL A . n A 1 26 GLU 26 25 25 GLU GLU A . n A 1 27 GLU 27 26 26 GLU GLU A . n A 1 28 ALA 28 27 27 ALA ALA A . n A 1 29 LYS 29 28 28 LYS LYS A . n A 1 30 LYS 30 29 29 LYS LYS A . n A 1 31 VAL 31 30 30 VAL VAL A . n A 1 32 LYS 32 31 31 LYS LYS A . n A 1 33 PRO 33 32 32 PRO PRO A . n A 1 34 THR 34 33 33 THR THR A . n A 1 35 VAL 35 34 34 VAL VAL A . n A 1 36 VAL 36 35 35 VAL VAL A . n A 1 37 VAL 37 36 36 VAL VAL A . n A 1 38 ASN 38 37 37 ASN ASN A . n A 1 39 ALA 39 38 38 ALA ALA A . n A 1 40 ALA 40 39 39 ALA ALA A . n A 1 41 ASN 41 40 40 ASN ASN A . n A 1 42 VAL 42 41 41 VAL VAL A . n A 1 43 TYR 43 42 42 TYR TYR A . n A 1 44 LEU 44 43 43 LEU LEU A . n A 1 45 LYS 45 44 44 LYS LYS A . n A 1 46 HIS 46 45 45 HIS HIS A . n A 1 47 GLY 47 46 46 GLY GLY A . n A 1 48 GLY 48 47 47 GLY GLY A . n A 1 49 GLY 49 48 48 GLY GLY A . n A 1 50 VAL 50 49 49 VAL VAL A . n A 1 51 ALA 51 50 50 ALA ALA A . n A 1 52 GLY 52 51 51 GLY GLY A . n A 1 53 ALA 53 52 52 ALA ALA A . n A 1 54 LEU 54 53 53 LEU LEU A . n A 1 55 ASN 55 54 54 ASN ASN A . n A 1 56 LYS 56 55 55 LYS LYS A . n A 1 57 ALA 57 56 56 ALA ALA A . n A 1 58 THR 58 57 57 THR THR A . n A 1 59 ASN 59 58 58 ASN ASN A . n A 1 60 ASN 60 59 59 ASN ASN A . n A 1 61 ALA 61 60 60 ALA ALA A . n A 1 62 MET 62 61 61 MET MET A . n A 1 63 GLN 63 62 62 GLN GLN A . n A 1 64 VAL 64 63 63 VAL VAL A . n A 1 65 GLU 65 64 64 GLU GLU A . n A 1 66 SER 66 65 65 SER SER A . n A 1 67 ASP 67 66 66 ASP ASP A . n A 1 68 ASP 68 67 67 ASP ASP A . n A 1 69 TYR 69 68 68 TYR TYR A . n A 1 70 ILE 70 69 69 ILE ILE A . n A 1 71 ALA 71 70 70 ALA ALA A . n A 1 72 THR 72 71 71 THR THR A . n A 1 73 ASN 73 72 72 ASN ASN A . n A 1 74 GLY 74 73 73 GLY GLY A . n A 1 75 PRO 75 74 74 PRO PRO A . n A 1 76 LEU 76 75 75 LEU LEU A . n A 1 77 LYS 77 76 76 LYS LYS A . n A 1 78 VAL 78 77 77 VAL VAL A . n A 1 79 GLY 79 78 78 GLY GLY A . n A 1 80 GLY 80 79 79 GLY GLY A . n A 1 81 SER 81 80 80 SER SER A . n A 1 82 CYS 82 81 81 CYS CYS A . n A 1 83 VAL 83 82 82 VAL VAL A . n A 1 84 LEU 84 83 83 LEU LEU A . n A 1 85 SER 85 84 84 SER SER A . n A 1 86 GLY 86 85 85 GLY GLY A . n A 1 87 HIS 87 86 86 HIS HIS A . n A 1 88 ASN 88 87 87 ASN ASN A . n A 1 89 LEU 89 88 88 LEU LEU A . n A 1 90 ALA 90 89 89 ALA ALA A . n A 1 91 LYS 91 90 90 LYS LYS A . n A 1 92 HIS 92 91 91 HIS HIS A . n A 1 93 CYS 93 92 92 CYS CYS A . n A 1 94 LEU 94 93 93 LEU LEU A . n A 1 95 HIS 95 94 94 HIS HIS A . n A 1 96 VAL 96 95 95 VAL VAL A . n A 1 97 VAL 97 96 96 VAL VAL A . n A 1 98 GLY 98 97 97 GLY GLY A . n A 1 99 PRO 99 98 98 PRO PRO A . n A 1 100 ASN 100 99 99 ASN ASN A . n A 1 101 VAL 101 100 100 VAL VAL A . n A 1 102 ASN 102 101 101 ASN ASN A . n A 1 103 LYS 103 102 102 LYS LYS A . n A 1 104 GLY 104 103 103 GLY GLY A . n A 1 105 GLU 105 104 104 GLU GLU A . n A 1 106 ASP 106 105 105 ASP ASP A . n A 1 107 ILE 107 106 106 ILE ILE A . n A 1 108 GLN 108 107 107 GLN GLN A . n A 1 109 LEU 109 108 108 LEU LEU A . n A 1 110 LEU 110 109 109 LEU LEU A . n A 1 111 LYS 111 110 110 LYS LYS A . n A 1 112 SER 112 111 111 SER SER A . n A 1 113 ALA 113 112 112 ALA ALA A . n A 1 114 TYR 114 113 113 TYR TYR A . n A 1 115 GLU 115 114 114 GLU GLU A . n A 1 116 ASN 116 115 115 ASN ASN A . n A 1 117 PHE 117 116 116 PHE PHE A . n A 1 118 ASN 118 117 117 ASN ASN A . n A 1 119 GLN 119 118 118 GLN GLN A . n A 1 120 HIS 120 119 119 HIS HIS A . n A 1 121 GLU 121 120 120 GLU GLU A . n A 1 122 VAL 122 121 121 VAL VAL A . n A 1 123 LEU 123 122 122 LEU LEU A . n A 1 124 LEU 124 123 123 LEU LEU A . n A 1 125 ALA 125 124 124 ALA ALA A . n A 1 126 PRO 126 125 125 PRO PRO A . n A 1 127 LEU 127 126 126 LEU LEU A . n A 1 128 LEU 128 127 127 LEU LEU A . n A 1 129 SER 129 128 128 SER SER A . n A 1 130 ALA 130 129 129 ALA ALA A . n A 1 131 GLY 131 130 130 GLY GLY A . n A 1 132 ILE 132 131 131 ILE ILE A . n A 1 133 PHE 133 132 132 PHE PHE A . n A 1 134 GLY 134 133 133 GLY GLY A . n A 1 135 ALA 135 134 134 ALA ALA A . n A 1 136 ASP 136 135 135 ASP ASP A . n A 1 137 PRO 137 136 136 PRO PRO A . n A 1 138 ILE 138 137 137 ILE ILE A . n A 1 139 HIS 139 138 138 HIS HIS A . n A 1 140 SER 140 139 139 SER SER A . n A 1 141 LEU 141 140 140 LEU LEU A . n A 1 142 ARG 142 141 141 ARG ARG A . n A 1 143 VAL 143 142 142 VAL VAL A . n A 1 144 CYS 144 143 143 CYS CYS A . n A 1 145 VAL 145 144 144 VAL VAL A . n A 1 146 ASP 146 145 145 ASP ASP A . n A 1 147 THR 147 146 146 THR THR A . n A 1 148 VAL 148 147 147 VAL VAL A . n A 1 149 ARG 149 148 148 ARG ARG A . n A 1 150 THR 150 149 149 THR THR A . n A 1 151 ASN 151 150 150 ASN ASN A . n A 1 152 VAL 152 151 151 VAL VAL A . n A 1 153 TYR 153 152 152 TYR TYR A . n A 1 154 LEU 154 153 153 LEU LEU A . n A 1 155 ALA 155 154 154 ALA ALA A . n A 1 156 VAL 156 155 155 VAL VAL A . n A 1 157 PHE 157 156 156 PHE PHE A . n A 1 158 ASP 158 157 157 ASP ASP A . n A 1 159 LYS 159 158 158 LYS LYS A . n A 1 160 ASN 160 159 159 ASN ASN A . n A 1 161 LEU 161 160 160 LEU LEU A . n A 1 162 TYR 162 161 161 TYR TYR A . n A 1 163 ASP 163 162 162 ASP ASP A . n A 1 164 LYS 164 163 163 LYS LYS A . n A 1 165 LEU 165 164 164 LEU LEU A . n A 1 166 VAL 166 165 165 VAL VAL A . n A 1 167 SER 167 166 166 SER SER A . n A 1 168 SER 168 167 167 SER SER A . n A 1 169 PHE 169 168 168 PHE PHE A . n A 1 170 LEU 170 169 169 LEU LEU A . n A 1 171 GLU 171 170 170 GLU GLU A . n A 1 172 MET 172 171 171 MET MET A . n A 1 173 LYS 173 172 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5GP 1 201 1 5GP 5GP A . C 3 EDO 1 202 1 EDO EDO A . D 3 EDO 1 203 2 EDO EDO A . E 3 EDO 1 204 3 EDO EDO A . F 3 EDO 1 205 4 EDO EDO A . G 3 EDO 1 206 5 EDO EDO A . H 3 EDO 1 207 6 EDO EDO A . I 3 EDO 1 208 8 EDO EDO A . J 3 EDO 1 209 10 EDO EDO A . K 3 EDO 1 210 11 EDO EDO A . L 4 HOH 1 301 2 HOH HOH A . L 4 HOH 2 302 102 HOH HOH A . L 4 HOH 3 303 218 HOH HOH A . L 4 HOH 4 304 227 HOH HOH A . L 4 HOH 5 305 253 HOH HOH A . L 4 HOH 6 306 241 HOH HOH A . L 4 HOH 7 307 243 HOH HOH A . L 4 HOH 8 308 171 HOH HOH A . L 4 HOH 9 309 162 HOH HOH A . L 4 HOH 10 310 150 HOH HOH A . L 4 HOH 11 311 108 HOH HOH A . L 4 HOH 12 312 81 HOH HOH A . L 4 HOH 13 313 155 HOH HOH A . L 4 HOH 14 314 249 HOH HOH A . L 4 HOH 15 315 54 HOH HOH A . L 4 HOH 16 316 41 HOH HOH A . L 4 HOH 17 317 27 HOH HOH A . L 4 HOH 18 318 255 HOH HOH A . L 4 HOH 19 319 219 HOH HOH A . L 4 HOH 20 320 153 HOH HOH A . L 4 HOH 21 321 132 HOH HOH A . L 4 HOH 22 322 116 HOH HOH A . L 4 HOH 23 323 24 HOH HOH A . L 4 HOH 24 324 84 HOH HOH A . L 4 HOH 25 325 143 HOH HOH A . L 4 HOH 26 326 226 HOH HOH A . L 4 HOH 27 327 13 HOH HOH A . L 4 HOH 28 328 186 HOH HOH A . L 4 HOH 29 329 230 HOH HOH A . L 4 HOH 30 330 51 HOH HOH A . L 4 HOH 31 331 244 HOH HOH A . L 4 HOH 32 332 69 HOH HOH A . L 4 HOH 33 333 111 HOH HOH A . L 4 HOH 34 334 213 HOH HOH A . L 4 HOH 35 335 61 HOH HOH A . L 4 HOH 36 336 221 HOH HOH A . L 4 HOH 37 337 242 HOH HOH A . L 4 HOH 38 338 59 HOH HOH A . L 4 HOH 39 339 33 HOH HOH A . L 4 HOH 40 340 105 HOH HOH A . L 4 HOH 41 341 39 HOH HOH A . L 4 HOH 42 342 45 HOH HOH A . L 4 HOH 43 343 117 HOH HOH A . L 4 HOH 44 344 125 HOH HOH A . L 4 HOH 45 345 131 HOH HOH A . L 4 HOH 46 346 66 HOH HOH A . L 4 HOH 47 347 20 HOH HOH A . L 4 HOH 48 348 129 HOH HOH A . L 4 HOH 49 349 5 HOH HOH A . L 4 HOH 50 350 25 HOH HOH A . L 4 HOH 51 351 136 HOH HOH A . L 4 HOH 52 352 38 HOH HOH A . L 4 HOH 53 353 74 HOH HOH A . L 4 HOH 54 354 240 HOH HOH A . L 4 HOH 55 355 251 HOH HOH A . L 4 HOH 56 356 115 HOH HOH A . L 4 HOH 57 357 135 HOH HOH A . L 4 HOH 58 358 214 HOH HOH A . L 4 HOH 59 359 65 HOH HOH A . L 4 HOH 60 360 195 HOH HOH A . L 4 HOH 61 361 248 HOH HOH A . L 4 HOH 62 362 80 HOH HOH A . L 4 HOH 63 363 142 HOH HOH A . L 4 HOH 64 364 106 HOH HOH A . L 4 HOH 65 365 40 HOH HOH A . L 4 HOH 66 366 26 HOH HOH A . L 4 HOH 67 367 8 HOH HOH A . L 4 HOH 68 368 72 HOH HOH A . L 4 HOH 69 369 18 HOH HOH A . L 4 HOH 70 370 68 HOH HOH A . L 4 HOH 71 371 11 HOH HOH A . L 4 HOH 72 372 63 HOH HOH A . L 4 HOH 73 373 110 HOH HOH A . L 4 HOH 74 374 100 HOH HOH A . L 4 HOH 75 375 203 HOH HOH A . L 4 HOH 76 376 134 HOH HOH A . L 4 HOH 77 377 212 HOH HOH A . L 4 HOH 78 378 15 HOH HOH A . L 4 HOH 79 379 90 HOH HOH A . L 4 HOH 80 380 98 HOH HOH A . L 4 HOH 81 381 31 HOH HOH A . L 4 HOH 82 382 21 HOH HOH A . L 4 HOH 83 383 245 HOH HOH A . L 4 HOH 84 384 93 HOH HOH A . L 4 HOH 85 385 6 HOH HOH A . L 4 HOH 86 386 29 HOH HOH A . L 4 HOH 87 387 229 HOH HOH A . L 4 HOH 88 388 43 HOH HOH A . L 4 HOH 89 389 60 HOH HOH A . L 4 HOH 90 390 254 HOH HOH A . L 4 HOH 91 391 12 HOH HOH A . L 4 HOH 92 392 85 HOH HOH A . L 4 HOH 93 393 83 HOH HOH A . L 4 HOH 94 394 91 HOH HOH A . L 4 HOH 95 395 174 HOH HOH A . L 4 HOH 96 396 237 HOH HOH A . L 4 HOH 97 397 48 HOH HOH A . L 4 HOH 98 398 50 HOH HOH A . L 4 HOH 99 399 30 HOH HOH A . L 4 HOH 100 400 87 HOH HOH A . L 4 HOH 101 401 220 HOH HOH A . L 4 HOH 102 402 22 HOH HOH A . L 4 HOH 103 403 97 HOH HOH A . L 4 HOH 104 404 36 HOH HOH A . L 4 HOH 105 405 58 HOH HOH A . L 4 HOH 106 406 32 HOH HOH A . L 4 HOH 107 407 9 HOH HOH A . L 4 HOH 108 408 28 HOH HOH A . L 4 HOH 109 409 120 HOH HOH A . L 4 HOH 110 410 67 HOH HOH A . L 4 HOH 111 411 235 HOH HOH A . L 4 HOH 112 412 10 HOH HOH A . L 4 HOH 113 413 35 HOH HOH A . L 4 HOH 114 414 138 HOH HOH A . L 4 HOH 115 415 122 HOH HOH A . L 4 HOH 116 416 57 HOH HOH A . L 4 HOH 117 417 198 HOH HOH A . L 4 HOH 118 418 147 HOH HOH A . L 4 HOH 119 419 7 HOH HOH A . L 4 HOH 120 420 222 HOH HOH A . L 4 HOH 121 421 216 HOH HOH A . L 4 HOH 122 422 145 HOH HOH A . L 4 HOH 123 423 37 HOH HOH A . L 4 HOH 124 424 89 HOH HOH A . L 4 HOH 125 425 233 HOH HOH A . L 4 HOH 126 426 56 HOH HOH A . L 4 HOH 127 427 211 HOH HOH A . L 4 HOH 128 428 4 HOH HOH A . L 4 HOH 129 429 52 HOH HOH A . L 4 HOH 130 430 154 HOH HOH A . L 4 HOH 131 431 46 HOH HOH A . L 4 HOH 132 432 73 HOH HOH A . L 4 HOH 133 433 49 HOH HOH A . L 4 HOH 134 434 62 HOH HOH A . L 4 HOH 135 435 44 HOH HOH A . L 4 HOH 136 436 75 HOH HOH A . L 4 HOH 137 437 193 HOH HOH A . L 4 HOH 138 438 94 HOH HOH A . L 4 HOH 139 439 17 HOH HOH A . L 4 HOH 140 440 70 HOH HOH A . L 4 HOH 141 441 79 HOH HOH A . L 4 HOH 142 442 234 HOH HOH A . L 4 HOH 143 443 19 HOH HOH A . L 4 HOH 144 444 34 HOH HOH A . L 4 HOH 145 445 250 HOH HOH A . L 4 HOH 146 446 53 HOH HOH A . L 4 HOH 147 447 163 HOH HOH A . L 4 HOH 148 448 103 HOH HOH A . L 4 HOH 149 449 126 HOH HOH A . L 4 HOH 150 450 169 HOH HOH A . L 4 HOH 151 451 157 HOH HOH A . L 4 HOH 152 452 47 HOH HOH A . L 4 HOH 153 453 225 HOH HOH A . L 4 HOH 154 454 231 HOH HOH A . L 4 HOH 155 455 88 HOH HOH A . L 4 HOH 156 456 183 HOH HOH A . L 4 HOH 157 457 228 HOH HOH A . L 4 HOH 158 458 14 HOH HOH A . L 4 HOH 159 459 78 HOH HOH A . L 4 HOH 160 460 149 HOH HOH A . L 4 HOH 161 461 95 HOH HOH A . L 4 HOH 162 462 247 HOH HOH A . L 4 HOH 163 463 238 HOH HOH A . L 4 HOH 164 464 236 HOH HOH A . L 4 HOH 165 465 217 HOH HOH A . L 4 HOH 166 466 77 HOH HOH A . L 4 HOH 167 467 86 HOH HOH A . L 4 HOH 168 468 180 HOH HOH A . L 4 HOH 169 469 109 HOH HOH A . L 4 HOH 170 470 239 HOH HOH A . L 4 HOH 171 471 200 HOH HOH A . L 4 HOH 172 472 175 HOH HOH A . L 4 HOH 173 473 113 HOH HOH A . L 4 HOH 174 474 185 HOH HOH A . L 4 HOH 175 475 224 HOH HOH A . L 4 HOH 176 476 139 HOH HOH A . L 4 HOH 177 477 92 HOH HOH A . L 4 HOH 178 478 252 HOH HOH A . L 4 HOH 179 479 196 HOH HOH A . L 4 HOH 180 480 232 HOH HOH A . L 4 HOH 181 481 76 HOH HOH A . L 4 HOH 182 482 118 HOH HOH A . L 4 HOH 183 483 199 HOH HOH A . L 4 HOH 184 484 223 HOH HOH A . L 4 HOH 185 485 96 HOH HOH A . L 4 HOH 186 486 201 HOH HOH A . L 4 HOH 187 487 208 HOH HOH A . L 4 HOH 188 488 42 HOH HOH A . L 4 HOH 189 489 144 HOH HOH A . L 4 HOH 190 490 107 HOH HOH A . L 4 HOH 191 491 246 HOH HOH A . L 4 HOH 192 492 104 HOH HOH A . L 4 HOH 193 493 159 HOH HOH A . L 4 HOH 194 494 55 HOH HOH A . L 4 HOH 195 495 119 HOH HOH A . L 4 HOH 196 496 71 HOH HOH A . L 4 HOH 197 497 156 HOH HOH A . L 4 HOH 198 498 99 HOH HOH A . L 4 HOH 199 499 194 HOH HOH A . L 4 HOH 200 500 207 HOH HOH A . L 4 HOH 201 501 146 HOH HOH A . L 4 HOH 202 502 127 HOH HOH A . L 4 HOH 203 503 112 HOH HOH A . L 4 HOH 204 504 114 HOH HOH A . L 4 HOH 205 505 141 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MET 2 ? CG ? A MET 3 CG 2 1 Y 1 A MET 2 ? SD ? A MET 3 SD 3 1 Y 1 A MET 2 ? CE ? A MET 3 CE # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.7.4 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0267 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7BF4 _cell.details ? _cell.formula_units_Z ? _cell.length_a 72.529 _cell.length_a_esd ? _cell.length_b 72.529 _cell.length_b_esd ? _cell.length_c 33.346 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BF4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7BF4 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 47.62 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.3 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '30% PEG 4000, 0.2 M sodium acetate, 0.1 MgCl2, 0.1 M tris, pH 8.3' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-06-22 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00003 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SLS BEAMLINE X06DA' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.00003 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X06DA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7BF4 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.550 _reflns.d_resolution_low 36.260 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 25315 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.200 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.100 _reflns.pdbx_Rmerge_I_obs 0.064 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.800 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.076 _reflns.pdbx_Rpim_I_all 0.030 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 1.550 1.600 ? 2.6 ? ? ? ? 2287 92.800 ? ? ? ? 0.349 ? ? ? ? ? ? ? ? 3.300 ? ? ? ? 0.455 0.244 ? 1 1 0.807 ? ? 6.000 36.260 ? ? ? ? ? ? 484 99.700 ? ? ? ? 0.058 ? ? ? ? ? ? ? ? 6.700 ? ? ? ? 0.062 0.024 ? 2 1 0.997 ? ? # _refine.aniso_B[1][1] 0.1400 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][2] 0.1400 _refine.aniso_B[2][3] -0.0000 _refine.aniso_B[3][3] -0.2800 _refine.B_iso_max 91.100 _refine.B_iso_mean 16.0240 _refine.B_iso_min 6.680 _refine.correlation_coeff_Fo_to_Fc 0.9720 _refine.correlation_coeff_Fo_to_Fc_free 0.9570 _refine.details 'U VALUES : WITH TLS ADDED HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7BF4 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.5500 _refine.ls_d_res_low 36.2600 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 24080 _refine.ls_number_reflns_R_free 1222 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.0800 _refine.ls_percent_reflns_R_free 4.8000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1401 _refine.ls_R_factor_R_free 0.1743 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1384 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 6ywk _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.0660 _refine.pdbx_overall_ESU_R_Free 0.0710 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 2.3620 _refine.overall_SU_ML 0.0430 _refine.overall_SU_R_Cruickshank_DPI 0.0663 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.5500 _refine_hist.d_res_low 36.2600 _refine_hist.number_atoms_solvent 205 _refine_hist.number_atoms_total 1574 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 170 _refine_hist.pdbx_B_iso_mean_ligand 23.53 _refine_hist.pdbx_B_iso_mean_solvent 29.36 _refine_hist.pdbx_number_atoms_protein 1285 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 84 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.018 0.013 1439 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.017 1375 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.686 1.635 1961 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.549 1.582 3174 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.881 5.000 186 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 38.670 25.593 59 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 11.851 15.000 228 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 13.095 15.000 2 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.104 0.200 188 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.013 0.020 1623 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 293 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.5500 _refine_ls_shell.d_res_low 1.5900 _refine_ls_shell.number_reflns_all 1702 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 80 _refine_ls_shell.number_reflns_R_work 1622 _refine_ls_shell.percent_reflns_obs 89.4800 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2390 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.1900 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 7BF4 _struct.title 'Crystal structure of SARS-CoV-2 macrodomain in complex with GMP' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7BF4 _struct_keywords.text ;nsp3, macrodomain, SARS-CoV-2, GMP, guanosine monophosphate, covid-19, Structural Genomics, Structural Genomics Consortium, SGC, VIRAL PROTEIN ; _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code R1AB_SARS2 _struct_ref.pdbx_db_accession P0DTD1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCV LSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYD KLVSSFLEMK ; _struct_ref.pdbx_align_begin 1025 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7BF4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 173 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0DTD1 _struct_ref_seq.db_align_beg 1025 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1194 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 3 _struct_ref_seq.pdbx_auth_seq_align_end 172 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7BF4 GLY A 1 ? UNP P0DTD1 ? ? 'expression tag' 0 1 1 7BF4 HIS A 2 ? UNP P0DTD1 ? ? 'expression tag' 1 2 1 7BF4 MET A 3 ? UNP P0DTD1 ? ? 'expression tag' 2 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2240 ? 1 MORE 26 ? 1 'SSA (A^2)' 7990 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 23 ? LYS A 32 ? ASP A 22 LYS A 31 1 ? 10 HELX_P HELX_P2 AA2 GLY A 48 ? THR A 58 ? GLY A 47 THR A 57 1 ? 11 HELX_P HELX_P3 AA3 ASN A 60 ? GLY A 74 ? ASN A 59 GLY A 73 1 ? 15 HELX_P HELX_P4 AA4 ASN A 100 ? GLY A 104 ? ASN A 99 GLY A 103 5 ? 5 HELX_P HELX_P5 AA5 GLN A 108 ? ASN A 116 ? GLN A 107 ASN A 115 1 ? 9 HELX_P HELX_P6 AA6 PHE A 117 ? HIS A 120 ? PHE A 116 HIS A 119 5 ? 4 HELX_P HELX_P7 AA7 ALA A 130 ? GLY A 134 ? ALA A 129 GLY A 133 5 ? 5 HELX_P HELX_P8 AA8 ASP A 136 ? VAL A 148 ? ASP A 135 VAL A 147 1 ? 13 HELX_P HELX_P9 AA9 ASP A 158 ? GLU A 171 ? ASP A 157 GLU A 170 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 11 ? LYS A 12 ? LEU A 10 LYS A 11 AA1 2 VAL A 17 ? ASN A 21 ? VAL A 16 ASN A 20 AA1 3 ASN A 151 ? VAL A 156 ? ASN A 150 VAL A 155 AA1 4 VAL A 122 ? ALA A 125 ? VAL A 121 ALA A 124 AA2 1 VAL A 35 ? ALA A 39 ? VAL A 34 ALA A 38 AA2 2 HIS A 92 ? VAL A 96 ? HIS A 91 VAL A 95 AA2 3 SER A 81 ? SER A 85 ? SER A 80 SER A 84 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 11 ? N LEU A 10 O ILE A 19 ? O ILE A 18 AA1 2 3 N TYR A 18 ? N TYR A 17 O LEU A 154 ? O LEU A 153 AA1 3 4 O TYR A 153 ? O TYR A 152 N LEU A 123 ? N LEU A 122 AA2 1 2 N ASN A 38 ? N ASN A 37 O VAL A 96 ? O VAL A 95 AA2 2 3 O CYS A 93 ? O CYS A 92 N LEU A 84 ? N LEU A 83 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 5GP 201 ? 23 'binding site for residue 5GP A 201' AC2 Software A EDO 202 ? 6 'binding site for residue EDO A 202' AC3 Software A EDO 203 ? 6 'binding site for residue EDO A 203' AC4 Software A EDO 204 ? 3 'binding site for residue EDO A 204' AC5 Software A EDO 205 ? 8 'binding site for residue EDO A 205' AC6 Software A EDO 206 ? 8 'binding site for residue EDO A 206' AC7 Software A EDO 207 ? 6 'binding site for residue EDO A 207' AC8 Software A EDO 208 ? 6 'binding site for residue EDO A 208' AC9 Software A EDO 209 ? 6 'binding site for residue EDO A 209' AD1 Software A EDO 210 ? 9 'binding site for residue EDO A 210' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 23 ASN A 41 ? ASN A 40 . ? 1_555 ? 2 AC1 23 LYS A 45 ? LYS A 44 . ? 1_555 ? 3 AC1 23 LYS A 45 ? LYS A 44 . ? 2_565 ? 4 AC1 23 GLY A 47 ? GLY A 46 . ? 1_555 ? 5 AC1 23 GLY A 48 ? GLY A 47 . ? 1_555 ? 6 AC1 23 GLY A 49 ? GLY A 48 . ? 1_555 ? 7 AC1 23 ASP A 67 ? ASP A 66 . ? 2_565 ? 8 AC1 23 ILE A 70 ? ILE A 69 . ? 2_565 ? 9 AC1 23 ALA A 71 ? ALA A 70 . ? 2_565 ? 10 AC1 23 ILE A 132 ? ILE A 131 . ? 1_555 ? 11 AC1 23 PHE A 133 ? PHE A 132 . ? 1_555 ? 12 AC1 23 EDO J . ? EDO A 209 . ? 1_556 ? 13 AC1 23 HOH L . ? HOH A 307 . ? 1_555 ? 14 AC1 23 HOH L . ? HOH A 318 . ? 1_555 ? 15 AC1 23 HOH L . ? HOH A 331 . ? 1_555 ? 16 AC1 23 HOH L . ? HOH A 342 . ? 1_555 ? 17 AC1 23 HOH L . ? HOH A 347 . ? 1_555 ? 18 AC1 23 HOH L . ? HOH A 349 . ? 1_555 ? 19 AC1 23 HOH L . ? HOH A 385 . ? 1_555 ? 20 AC1 23 HOH L . ? HOH A 388 . ? 1_555 ? 21 AC1 23 HOH L . ? HOH A 425 . ? 1_555 ? 22 AC1 23 HOH L . ? HOH A 437 . ? 1_555 ? 23 AC1 23 HOH L . ? HOH A 454 . ? 1_555 ? 24 AC2 6 SER A 8 ? SER A 7 . ? 1_555 ? 25 AC2 6 GLY A 9 ? GLY A 8 . ? 1_555 ? 26 AC2 6 TYR A 10 ? TYR A 9 . ? 1_555 ? 27 AC2 6 HIS A 87 ? HIS A 86 . ? 3_555 ? 28 AC2 6 ALA A 90 ? ALA A 89 . ? 3_555 ? 29 AC2 6 HOH L . ? HOH A 448 . ? 1_555 ? 30 AC3 6 LEU A 13 ? LEU A 12 . ? 1_555 ? 31 AC3 6 THR A 14 ? THR A 13 . ? 1_555 ? 32 AC3 6 ASP A 15 ? ASP A 14 . ? 1_555 ? 33 AC3 6 GLU A 65 ? GLU A 64 . ? 3_555 ? 34 AC3 6 HOH L . ? HOH A 378 . ? 1_555 ? 35 AC3 6 HOH L . ? HOH A 417 . ? 1_555 ? 36 AC4 3 GLY A 49 ? GLY A 48 . ? 1_555 ? 37 AC4 3 HOH L . ? HOH A 334 . ? 1_555 ? 38 AC4 3 HOH L . ? HOH A 358 . ? 1_555 ? 39 AC5 8 ALA A 39 ? ALA A 38 . ? 1_555 ? 40 AC5 8 LEU A 127 ? LEU A 126 . ? 1_555 ? 41 AC5 8 LEU A 128 ? LEU A 127 . ? 1_555 ? 42 AC5 8 SER A 129 ? SER A 128 . ? 1_555 ? 43 AC5 8 ALA A 130 ? ALA A 129 . ? 1_555 ? 44 AC5 8 HOH L . ? HOH A 302 . ? 1_555 ? 45 AC5 8 HOH L . ? HOH A 323 . ? 1_555 ? 46 AC5 8 HOH L . ? HOH A 391 . ? 1_555 ? 47 AC6 8 VAL A 50 ? VAL A 49 . ? 1_555 ? 48 AC6 8 PRO A 126 ? PRO A 125 . ? 1_555 ? 49 AC6 8 VAL A 156 ? VAL A 155 . ? 1_555 ? 50 AC6 8 PHE A 157 ? PHE A 156 . ? 1_555 ? 51 AC6 8 HOH L . ? HOH A 301 . ? 1_555 ? 52 AC6 8 HOH L . ? HOH A 302 . ? 1_555 ? 53 AC6 8 HOH L . ? HOH A 327 . ? 1_555 ? 54 AC6 8 HOH L . ? HOH A 405 . ? 1_555 ? 55 AC7 6 ILE A 107 ? ILE A 106 . ? 1_555 ? 56 AC7 6 GLN A 108 ? GLN A 107 . ? 1_555 ? 57 AC7 6 LYS A 111 ? LYS A 110 . ? 1_555 ? 58 AC7 6 HIS A 139 ? HIS A 138 . ? 1_555 ? 59 AC7 6 VAL A 143 ? VAL A 142 . ? 1_555 ? 60 AC7 6 HOH L . ? HOH A 310 . ? 1_555 ? 61 AC8 6 ASN A 41 ? ASN A 40 . ? 1_555 ? 62 AC8 6 ALA A 71 ? ALA A 70 . ? 2_565 ? 63 AC8 6 ASN A 100 ? ASN A 99 . ? 1_555 ? 64 AC8 6 PHE A 133 ? PHE A 132 . ? 1_555 ? 65 AC8 6 HOH L . ? HOH A 398 . ? 2_565 ? 66 AC8 6 HOH L . ? HOH A 440 . ? 1_555 ? 67 AC9 6 TYR A 43 ? TYR A 42 . ? 2_564 ? 68 AC9 6 LYS A 45 ? LYS A 44 . ? 2_564 ? 69 AC9 6 ASN A 73 ? ASN A 72 . ? 1_555 ? 70 AC9 6 5GP B . ? 5GP A 201 . ? 1_554 ? 71 AC9 6 HOH L . ? HOH A 315 . ? 1_555 ? 72 AC9 6 HOH L . ? HOH A 331 . ? 1_554 ? 73 AD1 9 TYR A 43 ? TYR A 42 . ? 2_565 ? 74 AD1 9 GLY A 47 ? GLY A 46 . ? 1_555 ? 75 AD1 9 GLY A 48 ? GLY A 47 . ? 1_555 ? 76 AD1 9 GLY A 52 ? GLY A 51 . ? 1_555 ? 77 AD1 9 ALA A 53 ? ALA A 52 . ? 1_555 ? 78 AD1 9 HOH L . ? HOH A 315 . ? 1_556 ? 79 AD1 9 HOH L . ? HOH A 338 . ? 2_565 ? 80 AD1 9 HOH L . ? HOH A 339 . ? 1_555 ? 81 AD1 9 HOH L . ? HOH A 379 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 304 ? ? O A HOH 457 ? ? 2.03 2 1 O2 A EDO 206 ? ? O A HOH 301 ? ? 2.09 3 1 O A HOH 475 ? ? O A HOH 484 ? ? 2.10 4 1 O1 A EDO 206 ? ? O A HOH 302 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 454 ? ? 1_555 O A HOH 480 ? ? 1_556 2.03 2 1 O A HOH 425 ? ? 1_555 O A HOH 480 ? ? 1_556 2.06 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CD _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 25 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OE2 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 25 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.331 _pdbx_validate_rmsd_bond.bond_target_value 1.252 _pdbx_validate_rmsd_bond.bond_deviation 0.079 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.011 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 148 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 148 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 148 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.40 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.10 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 86 ? ? 49.69 -128.99 2 1 THR A 149 ? A -102.72 -126.18 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -9.8644 22.5887 0.0951 0.0172 ? -0.0036 ? -0.0068 ? 0.0020 ? 0.0012 ? 0.0061 ? 0.8605 ? 0.4390 ? -0.1389 ? 0.4945 ? -0.2352 ? 0.2501 ? -0.0009 ? -0.0087 ? 0.0304 ? -0.0539 ? 0.0143 ? 0.0257 ? 0.0496 ? -0.0027 ? -0.0134 ? 2 'X-RAY DIFFRACTION' ? refined -26.2932 17.5711 9.7243 0.0070 ? 0.0004 ? -0.0069 ? 0.0238 ? -0.0051 ? 0.0363 ? 6.1880 ? 0.9356 ? 4.9363 ? 1.6262 ? 2.6760 ? 6.4464 ? -0.1499 ? -0.2064 ? 0.0469 ? -0.0572 ? -0.0965 ? 0.1710 ? -0.1643 ? -0.2478 ? 0.2465 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 2 ? ? ? A 162 ? ? ? 2 'X-RAY DIFFRACTION' 2 ? ? A 163 ? ? ? A 171 ? ? ? # _pdbx_entry_details.entry_id 7BF4 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A HIS 1 ? A HIS 2 3 1 Y 1 A LYS 172 ? A LYS 173 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5GP P P N N 1 5GP O1P O N N 2 5GP O2P O N N 3 5GP O3P O N N 4 5GP "O5'" O N N 5 5GP "C5'" C N N 6 5GP "C4'" C N R 7 5GP "O4'" O N N 8 5GP "C3'" C N S 9 5GP "O3'" O N N 10 5GP "C2'" C N R 11 5GP "O2'" O N N 12 5GP "C1'" C N R 13 5GP N9 N Y N 14 5GP C8 C Y N 15 5GP N7 N Y N 16 5GP C5 C Y N 17 5GP C6 C N N 18 5GP O6 O N N 19 5GP N1 N N N 20 5GP C2 C N N 21 5GP N2 N N N 22 5GP N3 N N N 23 5GP C4 C Y N 24 5GP HOP2 H N N 25 5GP HOP3 H N N 26 5GP "H5'1" H N N 27 5GP "H5'2" H N N 28 5GP "H4'" H N N 29 5GP "H3'" H N N 30 5GP "HO3'" H N N 31 5GP "H2'" H N N 32 5GP "HO2'" H N N 33 5GP "H1'" H N N 34 5GP H8 H N N 35 5GP HN1 H N N 36 5GP HN21 H N N 37 5GP HN22 H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 CYS N N N N 112 CYS CA C N R 113 CYS C C N N 114 CYS O O N N 115 CYS CB C N N 116 CYS SG S N N 117 CYS OXT O N N 118 CYS H H N N 119 CYS H2 H N N 120 CYS HA H N N 121 CYS HB2 H N N 122 CYS HB3 H N N 123 CYS HG H N N 124 CYS HXT H N N 125 EDO C1 C N N 126 EDO O1 O N N 127 EDO C2 C N N 128 EDO O2 O N N 129 EDO H11 H N N 130 EDO H12 H N N 131 EDO HO1 H N N 132 EDO H21 H N N 133 EDO H22 H N N 134 EDO HO2 H N N 135 GLN N N N N 136 GLN CA C N S 137 GLN C C N N 138 GLN O O N N 139 GLN CB C N N 140 GLN CG C N N 141 GLN CD C N N 142 GLN OE1 O N N 143 GLN NE2 N N N 144 GLN OXT O N N 145 GLN H H N N 146 GLN H2 H N N 147 GLN HA H N N 148 GLN HB2 H N N 149 GLN HB3 H N N 150 GLN HG2 H N N 151 GLN HG3 H N N 152 GLN HE21 H N N 153 GLN HE22 H N N 154 GLN HXT H N N 155 GLU N N N N 156 GLU CA C N S 157 GLU C C N N 158 GLU O O N N 159 GLU CB C N N 160 GLU CG C N N 161 GLU CD C N N 162 GLU OE1 O N N 163 GLU OE2 O N N 164 GLU OXT O N N 165 GLU H H N N 166 GLU H2 H N N 167 GLU HA H N N 168 GLU HB2 H N N 169 GLU HB3 H N N 170 GLU HG2 H N N 171 GLU HG3 H N N 172 GLU HE2 H N N 173 GLU HXT H N N 174 GLY N N N N 175 GLY CA C N N 176 GLY C C N N 177 GLY O O N N 178 GLY OXT O N N 179 GLY H H N N 180 GLY H2 H N N 181 GLY HA2 H N N 182 GLY HA3 H N N 183 GLY HXT H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 HOH O O N N 206 HOH H1 H N N 207 HOH H2 H N N 208 ILE N N N N 209 ILE CA C N S 210 ILE C C N N 211 ILE O O N N 212 ILE CB C N S 213 ILE CG1 C N N 214 ILE CG2 C N N 215 ILE CD1 C N N 216 ILE OXT O N N 217 ILE H H N N 218 ILE H2 H N N 219 ILE HA H N N 220 ILE HB H N N 221 ILE HG12 H N N 222 ILE HG13 H N N 223 ILE HG21 H N N 224 ILE HG22 H N N 225 ILE HG23 H N N 226 ILE HD11 H N N 227 ILE HD12 H N N 228 ILE HD13 H N N 229 ILE HXT H N N 230 LEU N N N N 231 LEU CA C N S 232 LEU C C N N 233 LEU O O N N 234 LEU CB C N N 235 LEU CG C N N 236 LEU CD1 C N N 237 LEU CD2 C N N 238 LEU OXT O N N 239 LEU H H N N 240 LEU H2 H N N 241 LEU HA H N N 242 LEU HB2 H N N 243 LEU HB3 H N N 244 LEU HG H N N 245 LEU HD11 H N N 246 LEU HD12 H N N 247 LEU HD13 H N N 248 LEU HD21 H N N 249 LEU HD22 H N N 250 LEU HD23 H N N 251 LEU HXT H N N 252 LYS N N N N 253 LYS CA C N S 254 LYS C C N N 255 LYS O O N N 256 LYS CB C N N 257 LYS CG C N N 258 LYS CD C N N 259 LYS CE C N N 260 LYS NZ N N N 261 LYS OXT O N N 262 LYS H H N N 263 LYS H2 H N N 264 LYS HA H N N 265 LYS HB2 H N N 266 LYS HB3 H N N 267 LYS HG2 H N N 268 LYS HG3 H N N 269 LYS HD2 H N N 270 LYS HD3 H N N 271 LYS HE2 H N N 272 LYS HE3 H N N 273 LYS HZ1 H N N 274 LYS HZ2 H N N 275 LYS HZ3 H N N 276 LYS HXT H N N 277 MET N N N N 278 MET CA C N S 279 MET C C N N 280 MET O O N N 281 MET CB C N N 282 MET CG C N N 283 MET SD S N N 284 MET CE C N N 285 MET OXT O N N 286 MET H H N N 287 MET H2 H N N 288 MET HA H N N 289 MET HB2 H N N 290 MET HB3 H N N 291 MET HG2 H N N 292 MET HG3 H N N 293 MET HE1 H N N 294 MET HE2 H N N 295 MET HE3 H N N 296 MET HXT H N N 297 PHE N N N N 298 PHE CA C N S 299 PHE C C N N 300 PHE O O N N 301 PHE CB C N N 302 PHE CG C Y N 303 PHE CD1 C Y N 304 PHE CD2 C Y N 305 PHE CE1 C Y N 306 PHE CE2 C Y N 307 PHE CZ C Y N 308 PHE OXT O N N 309 PHE H H N N 310 PHE H2 H N N 311 PHE HA H N N 312 PHE HB2 H N N 313 PHE HB3 H N N 314 PHE HD1 H N N 315 PHE HD2 H N N 316 PHE HE1 H N N 317 PHE HE2 H N N 318 PHE HZ H N N 319 PHE HXT H N N 320 PRO N N N N 321 PRO CA C N S 322 PRO C C N N 323 PRO O O N N 324 PRO CB C N N 325 PRO CG C N N 326 PRO CD C N N 327 PRO OXT O N N 328 PRO H H N N 329 PRO HA H N N 330 PRO HB2 H N N 331 PRO HB3 H N N 332 PRO HG2 H N N 333 PRO HG3 H N N 334 PRO HD2 H N N 335 PRO HD3 H N N 336 PRO HXT H N N 337 SER N N N N 338 SER CA C N S 339 SER C C N N 340 SER O O N N 341 SER CB C N N 342 SER OG O N N 343 SER OXT O N N 344 SER H H N N 345 SER H2 H N N 346 SER HA H N N 347 SER HB2 H N N 348 SER HB3 H N N 349 SER HG H N N 350 SER HXT H N N 351 THR N N N N 352 THR CA C N S 353 THR C C N N 354 THR O O N N 355 THR CB C N R 356 THR OG1 O N N 357 THR CG2 C N N 358 THR OXT O N N 359 THR H H N N 360 THR H2 H N N 361 THR HA H N N 362 THR HB H N N 363 THR HG1 H N N 364 THR HG21 H N N 365 THR HG22 H N N 366 THR HG23 H N N 367 THR HXT H N N 368 TYR N N N N 369 TYR CA C N S 370 TYR C C N N 371 TYR O O N N 372 TYR CB C N N 373 TYR CG C Y N 374 TYR CD1 C Y N 375 TYR CD2 C Y N 376 TYR CE1 C Y N 377 TYR CE2 C Y N 378 TYR CZ C Y N 379 TYR OH O N N 380 TYR OXT O N N 381 TYR H H N N 382 TYR H2 H N N 383 TYR HA H N N 384 TYR HB2 H N N 385 TYR HB3 H N N 386 TYR HD1 H N N 387 TYR HD2 H N N 388 TYR HE1 H N N 389 TYR HE2 H N N 390 TYR HH H N N 391 TYR HXT H N N 392 VAL N N N N 393 VAL CA C N S 394 VAL C C N N 395 VAL O O N N 396 VAL CB C N N 397 VAL CG1 C N N 398 VAL CG2 C N N 399 VAL OXT O N N 400 VAL H H N N 401 VAL H2 H N N 402 VAL HA H N N 403 VAL HB H N N 404 VAL HG11 H N N 405 VAL HG12 H N N 406 VAL HG13 H N N 407 VAL HG21 H N N 408 VAL HG22 H N N 409 VAL HG23 H N N 410 VAL HXT H N N 411 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5GP P O1P doub N N 1 5GP P O2P sing N N 2 5GP P O3P sing N N 3 5GP P "O5'" sing N N 4 5GP O2P HOP2 sing N N 5 5GP O3P HOP3 sing N N 6 5GP "O5'" "C5'" sing N N 7 5GP "C5'" "C4'" sing N N 8 5GP "C5'" "H5'1" sing N N 9 5GP "C5'" "H5'2" sing N N 10 5GP "C4'" "O4'" sing N N 11 5GP "C4'" "C3'" sing N N 12 5GP "C4'" "H4'" sing N N 13 5GP "O4'" "C1'" sing N N 14 5GP "C3'" "O3'" sing N N 15 5GP "C3'" "C2'" sing N N 16 5GP "C3'" "H3'" sing N N 17 5GP "O3'" "HO3'" sing N N 18 5GP "C2'" "O2'" sing N N 19 5GP "C2'" "C1'" sing N N 20 5GP "C2'" "H2'" sing N N 21 5GP "O2'" "HO2'" sing N N 22 5GP "C1'" N9 sing N N 23 5GP "C1'" "H1'" sing N N 24 5GP N9 C8 sing Y N 25 5GP N9 C4 sing Y N 26 5GP C8 N7 doub Y N 27 5GP C8 H8 sing N N 28 5GP N7 C5 sing Y N 29 5GP C5 C6 sing N N 30 5GP C5 C4 doub Y N 31 5GP C6 O6 doub N N 32 5GP C6 N1 sing N N 33 5GP N1 C2 sing N N 34 5GP N1 HN1 sing N N 35 5GP C2 N2 sing N N 36 5GP C2 N3 doub N N 37 5GP N2 HN21 sing N N 38 5GP N2 HN22 sing N N 39 5GP N3 C4 sing N N 40 ALA N CA sing N N 41 ALA N H sing N N 42 ALA N H2 sing N N 43 ALA CA C sing N N 44 ALA CA CB sing N N 45 ALA CA HA sing N N 46 ALA C O doub N N 47 ALA C OXT sing N N 48 ALA CB HB1 sing N N 49 ALA CB HB2 sing N N 50 ALA CB HB3 sing N N 51 ALA OXT HXT sing N N 52 ARG N CA sing N N 53 ARG N H sing N N 54 ARG N H2 sing N N 55 ARG CA C sing N N 56 ARG CA CB sing N N 57 ARG CA HA sing N N 58 ARG C O doub N N 59 ARG C OXT sing N N 60 ARG CB CG sing N N 61 ARG CB HB2 sing N N 62 ARG CB HB3 sing N N 63 ARG CG CD sing N N 64 ARG CG HG2 sing N N 65 ARG CG HG3 sing N N 66 ARG CD NE sing N N 67 ARG CD HD2 sing N N 68 ARG CD HD3 sing N N 69 ARG NE CZ sing N N 70 ARG NE HE sing N N 71 ARG CZ NH1 sing N N 72 ARG CZ NH2 doub N N 73 ARG NH1 HH11 sing N N 74 ARG NH1 HH12 sing N N 75 ARG NH2 HH21 sing N N 76 ARG NH2 HH22 sing N N 77 ARG OXT HXT sing N N 78 ASN N CA sing N N 79 ASN N H sing N N 80 ASN N H2 sing N N 81 ASN CA C sing N N 82 ASN CA CB sing N N 83 ASN CA HA sing N N 84 ASN C O doub N N 85 ASN C OXT sing N N 86 ASN CB CG sing N N 87 ASN CB HB2 sing N N 88 ASN CB HB3 sing N N 89 ASN CG OD1 doub N N 90 ASN CG ND2 sing N N 91 ASN ND2 HD21 sing N N 92 ASN ND2 HD22 sing N N 93 ASN OXT HXT sing N N 94 ASP N CA sing N N 95 ASP N H sing N N 96 ASP N H2 sing N N 97 ASP CA C sing N N 98 ASP CA CB sing N N 99 ASP CA HA sing N N 100 ASP C O doub N N 101 ASP C OXT sing N N 102 ASP CB CG sing N N 103 ASP CB HB2 sing N N 104 ASP CB HB3 sing N N 105 ASP CG OD1 doub N N 106 ASP CG OD2 sing N N 107 ASP OD2 HD2 sing N N 108 ASP OXT HXT sing N N 109 CYS N CA sing N N 110 CYS N H sing N N 111 CYS N H2 sing N N 112 CYS CA C sing N N 113 CYS CA CB sing N N 114 CYS CA HA sing N N 115 CYS C O doub N N 116 CYS C OXT sing N N 117 CYS CB SG sing N N 118 CYS CB HB2 sing N N 119 CYS CB HB3 sing N N 120 CYS SG HG sing N N 121 CYS OXT HXT sing N N 122 EDO C1 O1 sing N N 123 EDO C1 C2 sing N N 124 EDO C1 H11 sing N N 125 EDO C1 H12 sing N N 126 EDO O1 HO1 sing N N 127 EDO C2 O2 sing N N 128 EDO C2 H21 sing N N 129 EDO C2 H22 sing N N 130 EDO O2 HO2 sing N N 131 GLN N CA sing N N 132 GLN N H sing N N 133 GLN N H2 sing N N 134 GLN CA C sing N N 135 GLN CA CB sing N N 136 GLN CA HA sing N N 137 GLN C O doub N N 138 GLN C OXT sing N N 139 GLN CB CG sing N N 140 GLN CB HB2 sing N N 141 GLN CB HB3 sing N N 142 GLN CG CD sing N N 143 GLN CG HG2 sing N N 144 GLN CG HG3 sing N N 145 GLN CD OE1 doub N N 146 GLN CD NE2 sing N N 147 GLN NE2 HE21 sing N N 148 GLN NE2 HE22 sing N N 149 GLN OXT HXT sing N N 150 GLU N CA sing N N 151 GLU N H sing N N 152 GLU N H2 sing N N 153 GLU CA C sing N N 154 GLU CA CB sing N N 155 GLU CA HA sing N N 156 GLU C O doub N N 157 GLU C OXT sing N N 158 GLU CB CG sing N N 159 GLU CB HB2 sing N N 160 GLU CB HB3 sing N N 161 GLU CG CD sing N N 162 GLU CG HG2 sing N N 163 GLU CG HG3 sing N N 164 GLU CD OE1 doub N N 165 GLU CD OE2 sing N N 166 GLU OE2 HE2 sing N N 167 GLU OXT HXT sing N N 168 GLY N CA sing N N 169 GLY N H sing N N 170 GLY N H2 sing N N 171 GLY CA C sing N N 172 GLY CA HA2 sing N N 173 GLY CA HA3 sing N N 174 GLY C O doub N N 175 GLY C OXT sing N N 176 GLY OXT HXT sing N N 177 HIS N CA sing N N 178 HIS N H sing N N 179 HIS N H2 sing N N 180 HIS CA C sing N N 181 HIS CA CB sing N N 182 HIS CA HA sing N N 183 HIS C O doub N N 184 HIS C OXT sing N N 185 HIS CB CG sing N N 186 HIS CB HB2 sing N N 187 HIS CB HB3 sing N N 188 HIS CG ND1 sing Y N 189 HIS CG CD2 doub Y N 190 HIS ND1 CE1 doub Y N 191 HIS ND1 HD1 sing N N 192 HIS CD2 NE2 sing Y N 193 HIS CD2 HD2 sing N N 194 HIS CE1 NE2 sing Y N 195 HIS CE1 HE1 sing N N 196 HIS NE2 HE2 sing N N 197 HIS OXT HXT sing N N 198 HOH O H1 sing N N 199 HOH O H2 sing N N 200 ILE N CA sing N N 201 ILE N H sing N N 202 ILE N H2 sing N N 203 ILE CA C sing N N 204 ILE CA CB sing N N 205 ILE CA HA sing N N 206 ILE C O doub N N 207 ILE C OXT sing N N 208 ILE CB CG1 sing N N 209 ILE CB CG2 sing N N 210 ILE CB HB sing N N 211 ILE CG1 CD1 sing N N 212 ILE CG1 HG12 sing N N 213 ILE CG1 HG13 sing N N 214 ILE CG2 HG21 sing N N 215 ILE CG2 HG22 sing N N 216 ILE CG2 HG23 sing N N 217 ILE CD1 HD11 sing N N 218 ILE CD1 HD12 sing N N 219 ILE CD1 HD13 sing N N 220 ILE OXT HXT sing N N 221 LEU N CA sing N N 222 LEU N H sing N N 223 LEU N H2 sing N N 224 LEU CA C sing N N 225 LEU CA CB sing N N 226 LEU CA HA sing N N 227 LEU C O doub N N 228 LEU C OXT sing N N 229 LEU CB CG sing N N 230 LEU CB HB2 sing N N 231 LEU CB HB3 sing N N 232 LEU CG CD1 sing N N 233 LEU CG CD2 sing N N 234 LEU CG HG sing N N 235 LEU CD1 HD11 sing N N 236 LEU CD1 HD12 sing N N 237 LEU CD1 HD13 sing N N 238 LEU CD2 HD21 sing N N 239 LEU CD2 HD22 sing N N 240 LEU CD2 HD23 sing N N 241 LEU OXT HXT sing N N 242 LYS N CA sing N N 243 LYS N H sing N N 244 LYS N H2 sing N N 245 LYS CA C sing N N 246 LYS CA CB sing N N 247 LYS CA HA sing N N 248 LYS C O doub N N 249 LYS C OXT sing N N 250 LYS CB CG sing N N 251 LYS CB HB2 sing N N 252 LYS CB HB3 sing N N 253 LYS CG CD sing N N 254 LYS CG HG2 sing N N 255 LYS CG HG3 sing N N 256 LYS CD CE sing N N 257 LYS CD HD2 sing N N 258 LYS CD HD3 sing N N 259 LYS CE NZ sing N N 260 LYS CE HE2 sing N N 261 LYS CE HE3 sing N N 262 LYS NZ HZ1 sing N N 263 LYS NZ HZ2 sing N N 264 LYS NZ HZ3 sing N N 265 LYS OXT HXT sing N N 266 MET N CA sing N N 267 MET N H sing N N 268 MET N H2 sing N N 269 MET CA C sing N N 270 MET CA CB sing N N 271 MET CA HA sing N N 272 MET C O doub N N 273 MET C OXT sing N N 274 MET CB CG sing N N 275 MET CB HB2 sing N N 276 MET CB HB3 sing N N 277 MET CG SD sing N N 278 MET CG HG2 sing N N 279 MET CG HG3 sing N N 280 MET SD CE sing N N 281 MET CE HE1 sing N N 282 MET CE HE2 sing N N 283 MET CE HE3 sing N N 284 MET OXT HXT sing N N 285 PHE N CA sing N N 286 PHE N H sing N N 287 PHE N H2 sing N N 288 PHE CA C sing N N 289 PHE CA CB sing N N 290 PHE CA HA sing N N 291 PHE C O doub N N 292 PHE C OXT sing N N 293 PHE CB CG sing N N 294 PHE CB HB2 sing N N 295 PHE CB HB3 sing N N 296 PHE CG CD1 doub Y N 297 PHE CG CD2 sing Y N 298 PHE CD1 CE1 sing Y N 299 PHE CD1 HD1 sing N N 300 PHE CD2 CE2 doub Y N 301 PHE CD2 HD2 sing N N 302 PHE CE1 CZ doub Y N 303 PHE CE1 HE1 sing N N 304 PHE CE2 CZ sing Y N 305 PHE CE2 HE2 sing N N 306 PHE CZ HZ sing N N 307 PHE OXT HXT sing N N 308 PRO N CA sing N N 309 PRO N CD sing N N 310 PRO N H sing N N 311 PRO CA C sing N N 312 PRO CA CB sing N N 313 PRO CA HA sing N N 314 PRO C O doub N N 315 PRO C OXT sing N N 316 PRO CB CG sing N N 317 PRO CB HB2 sing N N 318 PRO CB HB3 sing N N 319 PRO CG CD sing N N 320 PRO CG HG2 sing N N 321 PRO CG HG3 sing N N 322 PRO CD HD2 sing N N 323 PRO CD HD3 sing N N 324 PRO OXT HXT sing N N 325 SER N CA sing N N 326 SER N H sing N N 327 SER N H2 sing N N 328 SER CA C sing N N 329 SER CA CB sing N N 330 SER CA HA sing N N 331 SER C O doub N N 332 SER C OXT sing N N 333 SER CB OG sing N N 334 SER CB HB2 sing N N 335 SER CB HB3 sing N N 336 SER OG HG sing N N 337 SER OXT HXT sing N N 338 THR N CA sing N N 339 THR N H sing N N 340 THR N H2 sing N N 341 THR CA C sing N N 342 THR CA CB sing N N 343 THR CA HA sing N N 344 THR C O doub N N 345 THR C OXT sing N N 346 THR CB OG1 sing N N 347 THR CB CG2 sing N N 348 THR CB HB sing N N 349 THR OG1 HG1 sing N N 350 THR CG2 HG21 sing N N 351 THR CG2 HG22 sing N N 352 THR CG2 HG23 sing N N 353 THR OXT HXT sing N N 354 TYR N CA sing N N 355 TYR N H sing N N 356 TYR N H2 sing N N 357 TYR CA C sing N N 358 TYR CA CB sing N N 359 TYR CA HA sing N N 360 TYR C O doub N N 361 TYR C OXT sing N N 362 TYR CB CG sing N N 363 TYR CB HB2 sing N N 364 TYR CB HB3 sing N N 365 TYR CG CD1 doub Y N 366 TYR CG CD2 sing Y N 367 TYR CD1 CE1 sing Y N 368 TYR CD1 HD1 sing N N 369 TYR CD2 CE2 doub Y N 370 TYR CD2 HD2 sing N N 371 TYR CE1 CZ doub Y N 372 TYR CE1 HE1 sing N N 373 TYR CE2 CZ sing Y N 374 TYR CE2 HE2 sing N N 375 TYR CZ OH sing N N 376 TYR OH HH sing N N 377 TYR OXT HXT sing N N 378 VAL N CA sing N N 379 VAL N H sing N N 380 VAL N H2 sing N N 381 VAL CA C sing N N 382 VAL CA CB sing N N 383 VAL CA HA sing N N 384 VAL C O doub N N 385 VAL C OXT sing N N 386 VAL CB CG1 sing N N 387 VAL CB CG2 sing N N 388 VAL CB HB sing N N 389 VAL CG1 HG11 sing N N 390 VAL CG1 HG12 sing N N 391 VAL CG1 HG13 sing N N 392 VAL CG2 HG21 sing N N 393 VAL CG2 HG22 sing N N 394 VAL CG2 HG23 sing N N 395 VAL OXT HXT sing N N 396 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id 5GP _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id 5GP _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6YWK _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 7BF4 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.013788 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013788 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.029989 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_