data_7DMY # _entry.id 7DMY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7DMY pdb_00007dmy 10.2210/pdb7dmy/pdb WWPDB D_1300019764 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7DMY _pdbx_database_status.recvd_initial_deposition_date 2020-12-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Xiong, L.' 1 ? 'Guo, Y.' 2 ? 'Yang, S.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biochem.Biophys.Res.Commun. _citation.journal_id_ASTM BBRCA9 _citation.journal_id_CSD 0146 _citation.journal_id_ISSN 1090-2104 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 545 _citation.language ? _citation.page_first 125 _citation.page_last 131 _citation.title 'Discovery of selective BPTF bromodomain inhibitors by screening and structure-based optimization.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.bbrc.2021.01.067 _citation.pdbx_database_id_PubMed 33548625 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Xiong, L.' 1 ? primary 'Mao, X.' 2 ? primary 'Guo, Y.' 3 ? primary 'Zhou, Y.' 4 ? primary 'Chen, M.' 5 ? primary 'Chen, P.' 6 ? primary 'Yang, S.' 7 ? primary 'Li, L.' 8 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 95.350 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7DMY _cell.details ? _cell.formula_units_Z ? _cell.length_a 75.011 _cell.length_a_esd ? _cell.length_b 44.931 _cell.length_b_esd ? _cell.length_c 40.838 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DMY _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Nucleosome-remodeling factor subunit BPTF' 16927.086 1 ? ? Bromodomain ? 2 non-polymer syn ;tert-butyl 3-methyl-2-[[(3R,5R)-1-methyl-5-phenyl-piperidin-3-yl]amino]-4-oxidanylidene-5,7-dihydropyrrolo[3,4-d]pyrimidine-6-carboxylate ; 439.551 1 ? ? ? ? 3 water nat water 18.015 15 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Bromodomain and PHD finger-containing transcription factor,Fetal Alz-50 clone 1 protein,Fetal Alzheimer antigen' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHSSGVDLGTENLYFQSMSTEDAMTVLTPLTEKDYEGLKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMD LATMEERVQRRYYEKLTEFVADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGFKASRSH ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHSSGVDLGTENLYFQSMSTEDAMTVLTPLTEKDYEGLKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMD LATMEERVQRRYYEKLTEFVADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGFKASRSH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 VAL n 1 12 ASP n 1 13 LEU n 1 14 GLY n 1 15 THR n 1 16 GLU n 1 17 ASN n 1 18 LEU n 1 19 TYR n 1 20 PHE n 1 21 GLN n 1 22 SER n 1 23 MET n 1 24 SER n 1 25 THR n 1 26 GLU n 1 27 ASP n 1 28 ALA n 1 29 MET n 1 30 THR n 1 31 VAL n 1 32 LEU n 1 33 THR n 1 34 PRO n 1 35 LEU n 1 36 THR n 1 37 GLU n 1 38 LYS n 1 39 ASP n 1 40 TYR n 1 41 GLU n 1 42 GLY n 1 43 LEU n 1 44 LYS n 1 45 ARG n 1 46 VAL n 1 47 LEU n 1 48 ARG n 1 49 SER n 1 50 LEU n 1 51 GLN n 1 52 ALA n 1 53 HIS n 1 54 LYS n 1 55 MET n 1 56 ALA n 1 57 TRP n 1 58 PRO n 1 59 PHE n 1 60 LEU n 1 61 GLU n 1 62 PRO n 1 63 VAL n 1 64 ASP n 1 65 PRO n 1 66 ASN n 1 67 ASP n 1 68 ALA n 1 69 PRO n 1 70 ASP n 1 71 TYR n 1 72 TYR n 1 73 GLY n 1 74 VAL n 1 75 ILE n 1 76 LYS n 1 77 GLU n 1 78 PRO n 1 79 MET n 1 80 ASP n 1 81 LEU n 1 82 ALA n 1 83 THR n 1 84 MET n 1 85 GLU n 1 86 GLU n 1 87 ARG n 1 88 VAL n 1 89 GLN n 1 90 ARG n 1 91 ARG n 1 92 TYR n 1 93 TYR n 1 94 GLU n 1 95 LYS n 1 96 LEU n 1 97 THR n 1 98 GLU n 1 99 PHE n 1 100 VAL n 1 101 ALA n 1 102 ASP n 1 103 MET n 1 104 THR n 1 105 LYS n 1 106 ILE n 1 107 PHE n 1 108 ASP n 1 109 ASN n 1 110 CYS n 1 111 ARG n 1 112 TYR n 1 113 TYR n 1 114 ASN n 1 115 PRO n 1 116 SER n 1 117 ASP n 1 118 SER n 1 119 PRO n 1 120 PHE n 1 121 TYR n 1 122 GLN n 1 123 CYS n 1 124 ALA n 1 125 GLU n 1 126 VAL n 1 127 LEU n 1 128 GLU n 1 129 SER n 1 130 PHE n 1 131 PHE n 1 132 VAL n 1 133 GLN n 1 134 LYS n 1 135 LEU n 1 136 LYS n 1 137 GLY n 1 138 PHE n 1 139 LYS n 1 140 ALA n 1 141 SER n 1 142 ARG n 1 143 SER n 1 144 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 144 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BPTF, FAC1, FALZ' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BPTF_HUMAN _struct_ref.pdbx_db_accession Q12830 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;STEDAMTVLTPLTEKDYEGLKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADM TKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGFKASRSH ; _struct_ref.pdbx_align_begin 2917 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7DMY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 24 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 144 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q12830 _struct_ref_seq.db_align_beg 2917 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 3037 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2791 _struct_ref_seq.pdbx_auth_seq_align_end 2911 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7DMY MET A 1 ? UNP Q12830 ? ? 'initiating methionine' 2768 1 1 7DMY HIS A 2 ? UNP Q12830 ? ? 'expression tag' 2769 2 1 7DMY HIS A 3 ? UNP Q12830 ? ? 'expression tag' 2770 3 1 7DMY HIS A 4 ? UNP Q12830 ? ? 'expression tag' 2771 4 1 7DMY HIS A 5 ? UNP Q12830 ? ? 'expression tag' 2772 5 1 7DMY HIS A 6 ? UNP Q12830 ? ? 'expression tag' 2773 6 1 7DMY HIS A 7 ? UNP Q12830 ? ? 'expression tag' 2774 7 1 7DMY SER A 8 ? UNP Q12830 ? ? 'expression tag' 2775 8 1 7DMY SER A 9 ? UNP Q12830 ? ? 'expression tag' 2776 9 1 7DMY GLY A 10 ? UNP Q12830 ? ? 'expression tag' 2777 10 1 7DMY VAL A 11 ? UNP Q12830 ? ? 'expression tag' 2778 11 1 7DMY ASP A 12 ? UNP Q12830 ? ? 'expression tag' 2779 12 1 7DMY LEU A 13 ? UNP Q12830 ? ? 'expression tag' 2780 13 1 7DMY GLY A 14 ? UNP Q12830 ? ? 'expression tag' 2781 14 1 7DMY THR A 15 ? UNP Q12830 ? ? 'expression tag' 2782 15 1 7DMY GLU A 16 ? UNP Q12830 ? ? 'expression tag' 2783 16 1 7DMY ASN A 17 ? UNP Q12830 ? ? 'expression tag' 2784 17 1 7DMY LEU A 18 ? UNP Q12830 ? ? 'expression tag' 2785 18 1 7DMY TYR A 19 ? UNP Q12830 ? ? 'expression tag' 2786 19 1 7DMY PHE A 20 ? UNP Q12830 ? ? 'expression tag' 2787 20 1 7DMY GLN A 21 ? UNP Q12830 ? ? 'expression tag' 2788 21 1 7DMY SER A 22 ? UNP Q12830 ? ? 'expression tag' 2789 22 1 7DMY MET A 23 ? UNP Q12830 ? ? 'expression tag' 2790 23 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HAF non-polymer . ;tert-butyl 3-methyl-2-[[(3R,5R)-1-methyl-5-phenyl-piperidin-3-yl]amino]-4-oxidanylidene-5,7-dihydropyrrolo[3,4-d]pyrimidine-6-carboxylate ; ? 'C24 H33 N5 O3' 439.551 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7DMY _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.02 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 39.23 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2M Ammonium acetate, 20% PEG 3350, pH 7.1' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-11-11 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97875 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97875 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate 22.250 _reflns.entry_id 7DMY _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 9269 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.16 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.967 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2 _reflns_shell.d_res_low 2.03 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 9269 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.935 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 134.160 _refine.B_iso_mean 34.5363 _refine.B_iso_min 9.210 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7DMY _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.0000 _refine.ls_d_res_low 37.3420 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 9146 _refine.ls_number_reflns_R_free 493 _refine.ls_number_reflns_R_work 8653 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.5100 _refine.ls_percent_reflns_R_free 5.3900 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2545 _refine.ls_R_factor_R_free 0.2881 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2525 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.460 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3UV2 _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 32.7200 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3000 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.0000 _refine_hist.d_res_low 37.3420 _refine_hist.number_atoms_solvent 15 _refine_hist.number_atoms_total 1066 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 119 _refine_hist.pdbx_B_iso_mean_ligand 39.02 _refine_hist.pdbx_B_iso_mean_solvent 26.41 _refine_hist.pdbx_number_atoms_protein 986 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 65 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.013 ? 1054 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.449 ? 1431 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.057 ? 148 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.009 ? 181 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 15.463 ? 636 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.0 2.2010 . . 115 2147 98.0000 . . . 0.4010 0.0000 0.3115 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2010 2.5194 . . 145 2114 98.0000 . . . 0.3354 0.0000 0.2872 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5194 3.1739 . . 99 2202 99.0000 . . . 0.3323 0.0000 0.2675 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1739 3.42 . . 134 2190 99.0000 . . . 0.2229 0.0000 0.2160 . . . . . . . . . . . # _struct.entry_id 7DMY _struct.title 'The crystal structure of Cpd7 in complex with BPTF bromodomain' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7DMY _struct_keywords.text 'inhibitor;BPTF;Bromodomain, PROTEIN BINDING' _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLU A 26 ? THR A 33 ? GLU A 2793 THR A 2800 1 ? 8 HELX_P HELX_P2 AA2 THR A 36 ? ALA A 52 ? THR A 2803 ALA A 2819 1 ? 17 HELX_P HELX_P3 AA3 HIS A 53 ? LEU A 60 ? HIS A 2820 LEU A 2827 5 ? 8 HELX_P HELX_P4 AA4 ALA A 68 ? VAL A 74 ? ALA A 2835 VAL A 2841 5 ? 7 HELX_P HELX_P5 AA5 ASP A 80 ? ARG A 90 ? ASP A 2847 ARG A 2857 1 ? 11 HELX_P HELX_P6 AA6 LYS A 95 ? ASN A 114 ? LYS A 2862 ASN A 2881 1 ? 20 HELX_P HELX_P7 AA7 SER A 118 ? SER A 143 ? SER A 2885 SER A 2910 1 ? 26 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id HAF _struct_site.pdbx_auth_seq_id 3001 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 9 _struct_site.details 'binding site for residue HAF A 3001' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 GLU A 26 ? GLU A 2793 . ? 3_455 ? 2 AC1 9 TRP A 57 ? TRP A 2824 . ? 1_555 ? 3 AC1 9 PRO A 58 ? PRO A 2825 . ? 1_555 ? 4 AC1 9 PRO A 62 ? PRO A 2829 . ? 1_555 ? 5 AC1 9 VAL A 63 ? VAL A 2830 . ? 1_555 ? 6 AC1 9 TYR A 113 ? TYR A 2880 . ? 1_555 ? 7 AC1 9 ASN A 114 ? ASN A 2881 . ? 1_555 ? 8 AC1 9 PRO A 115 ? PRO A 2882 . ? 1_555 ? 9 AC1 9 SER A 141 ? SER A 2908 . ? 4_455 ? # _atom_sites.entry_id 7DMY _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.013331 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001248 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022256 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024594 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 2768 ? ? ? A . n A 1 2 HIS 2 2769 ? ? ? A . n A 1 3 HIS 3 2770 ? ? ? A . n A 1 4 HIS 4 2771 ? ? ? A . n A 1 5 HIS 5 2772 ? ? ? A . n A 1 6 HIS 6 2773 ? ? ? A . n A 1 7 HIS 7 2774 ? ? ? A . n A 1 8 SER 8 2775 ? ? ? A . n A 1 9 SER 9 2776 ? ? ? A . n A 1 10 GLY 10 2777 ? ? ? A . n A 1 11 VAL 11 2778 ? ? ? A . n A 1 12 ASP 12 2779 ? ? ? A . n A 1 13 LEU 13 2780 ? ? ? A . n A 1 14 GLY 14 2781 ? ? ? A . n A 1 15 THR 15 2782 ? ? ? A . n A 1 16 GLU 16 2783 ? ? ? A . n A 1 17 ASN 17 2784 ? ? ? A . n A 1 18 LEU 18 2785 ? ? ? A . n A 1 19 TYR 19 2786 ? ? ? A . n A 1 20 PHE 20 2787 ? ? ? A . n A 1 21 GLN 21 2788 ? ? ? A . n A 1 22 SER 22 2789 ? ? ? A . n A 1 23 MET 23 2790 ? ? ? A . n A 1 24 SER 24 2791 ? ? ? A . n A 1 25 THR 25 2792 ? ? ? A . n A 1 26 GLU 26 2793 2793 GLU GLU A . n A 1 27 ASP 27 2794 2794 ASP ASP A . n A 1 28 ALA 28 2795 2795 ALA ALA A . n A 1 29 MET 29 2796 2796 MET MET A . n A 1 30 THR 30 2797 2797 THR THR A . n A 1 31 VAL 31 2798 2798 VAL VAL A . n A 1 32 LEU 32 2799 2799 LEU LEU A . n A 1 33 THR 33 2800 2800 THR THR A . n A 1 34 PRO 34 2801 2801 PRO PRO A . n A 1 35 LEU 35 2802 2802 LEU LEU A . n A 1 36 THR 36 2803 2803 THR THR A . n A 1 37 GLU 37 2804 2804 GLU GLU A . n A 1 38 LYS 38 2805 2805 LYS LYS A . n A 1 39 ASP 39 2806 2806 ASP ASP A . n A 1 40 TYR 40 2807 2807 TYR TYR A . n A 1 41 GLU 41 2808 2808 GLU GLU A . n A 1 42 GLY 42 2809 2809 GLY GLY A . n A 1 43 LEU 43 2810 2810 LEU LEU A . n A 1 44 LYS 44 2811 2811 LYS LYS A . n A 1 45 ARG 45 2812 2812 ARG ARG A . n A 1 46 VAL 46 2813 2813 VAL VAL A . n A 1 47 LEU 47 2814 2814 LEU LEU A . n A 1 48 ARG 48 2815 2815 ARG ARG A . n A 1 49 SER 49 2816 2816 SER SER A . n A 1 50 LEU 50 2817 2817 LEU LEU A . n A 1 51 GLN 51 2818 2818 GLN GLN A . n A 1 52 ALA 52 2819 2819 ALA ALA A . n A 1 53 HIS 53 2820 2820 HIS HIS A . n A 1 54 LYS 54 2821 2821 LYS LYS A . n A 1 55 MET 55 2822 2822 MET MET A . n A 1 56 ALA 56 2823 2823 ALA ALA A . n A 1 57 TRP 57 2824 2824 TRP TRP A . n A 1 58 PRO 58 2825 2825 PRO PRO A . n A 1 59 PHE 59 2826 2826 PHE PHE A . n A 1 60 LEU 60 2827 2827 LEU LEU A . n A 1 61 GLU 61 2828 2828 GLU GLU A . n A 1 62 PRO 62 2829 2829 PRO PRO A . n A 1 63 VAL 63 2830 2830 VAL VAL A . n A 1 64 ASP 64 2831 2831 ASP ASP A . n A 1 65 PRO 65 2832 2832 PRO PRO A . n A 1 66 ASN 66 2833 2833 ASN ASN A . n A 1 67 ASP 67 2834 2834 ASP ASP A . n A 1 68 ALA 68 2835 2835 ALA ALA A . n A 1 69 PRO 69 2836 2836 PRO PRO A . n A 1 70 ASP 70 2837 2837 ASP ASP A . n A 1 71 TYR 71 2838 2838 TYR TYR A . n A 1 72 TYR 72 2839 2839 TYR TYR A . n A 1 73 GLY 73 2840 2840 GLY GLY A . n A 1 74 VAL 74 2841 2841 VAL VAL A . n A 1 75 ILE 75 2842 2842 ILE ILE A . n A 1 76 LYS 76 2843 2843 LYS LYS A . n A 1 77 GLU 77 2844 2844 GLU GLU A . n A 1 78 PRO 78 2845 2845 PRO PRO A . n A 1 79 MET 79 2846 2846 MET MET A . n A 1 80 ASP 80 2847 2847 ASP ASP A . n A 1 81 LEU 81 2848 2848 LEU LEU A . n A 1 82 ALA 82 2849 2849 ALA ALA A . n A 1 83 THR 83 2850 2850 THR THR A . n A 1 84 MET 84 2851 2851 MET MET A . n A 1 85 GLU 85 2852 2852 GLU GLU A . n A 1 86 GLU 86 2853 2853 GLU GLU A . n A 1 87 ARG 87 2854 2854 ARG ARG A . n A 1 88 VAL 88 2855 2855 VAL VAL A . n A 1 89 GLN 89 2856 2856 GLN GLN A . n A 1 90 ARG 90 2857 2857 ARG ARG A . n A 1 91 ARG 91 2858 2858 ARG ARG A . n A 1 92 TYR 92 2859 2859 TYR TYR A . n A 1 93 TYR 93 2860 2860 TYR TYR A . n A 1 94 GLU 94 2861 2861 GLU GLU A . n A 1 95 LYS 95 2862 2862 LYS LYS A . n A 1 96 LEU 96 2863 2863 LEU LEU A . n A 1 97 THR 97 2864 2864 THR THR A . n A 1 98 GLU 98 2865 2865 GLU GLU A . n A 1 99 PHE 99 2866 2866 PHE PHE A . n A 1 100 VAL 100 2867 2867 VAL VAL A . n A 1 101 ALA 101 2868 2868 ALA ALA A . n A 1 102 ASP 102 2869 2869 ASP ASP A . n A 1 103 MET 103 2870 2870 MET MET A . n A 1 104 THR 104 2871 2871 THR THR A . n A 1 105 LYS 105 2872 2872 LYS LYS A . n A 1 106 ILE 106 2873 2873 ILE ILE A . n A 1 107 PHE 107 2874 2874 PHE PHE A . n A 1 108 ASP 108 2875 2875 ASP ASP A . n A 1 109 ASN 109 2876 2876 ASN ASN A . n A 1 110 CYS 110 2877 2877 CYS CYS A . n A 1 111 ARG 111 2878 2878 ARG ARG A . n A 1 112 TYR 112 2879 2879 TYR TYR A . n A 1 113 TYR 113 2880 2880 TYR TYR A . n A 1 114 ASN 114 2881 2881 ASN ASN A . n A 1 115 PRO 115 2882 2882 PRO PRO A . n A 1 116 SER 116 2883 2883 SER SER A . n A 1 117 ASP 117 2884 2884 ASP ASP A . n A 1 118 SER 118 2885 2885 SER SER A . n A 1 119 PRO 119 2886 2886 PRO PRO A . n A 1 120 PHE 120 2887 2887 PHE PHE A . n A 1 121 TYR 121 2888 2888 TYR TYR A . n A 1 122 GLN 122 2889 2889 GLN GLN A . n A 1 123 CYS 123 2890 2890 CYS CYS A . n A 1 124 ALA 124 2891 2891 ALA ALA A . n A 1 125 GLU 125 2892 2892 GLU GLU A . n A 1 126 VAL 126 2893 2893 VAL VAL A . n A 1 127 LEU 127 2894 2894 LEU LEU A . n A 1 128 GLU 128 2895 2895 GLU GLU A . n A 1 129 SER 129 2896 2896 SER SER A . n A 1 130 PHE 130 2897 2897 PHE PHE A . n A 1 131 PHE 131 2898 2898 PHE PHE A . n A 1 132 VAL 132 2899 2899 VAL VAL A . n A 1 133 GLN 133 2900 2900 GLN GLN A . n A 1 134 LYS 134 2901 2901 LYS LYS A . n A 1 135 LEU 135 2902 2902 LEU LEU A . n A 1 136 LYS 136 2903 2903 LYS LYS A . n A 1 137 GLY 137 2904 2904 GLY GLY A . n A 1 138 PHE 138 2905 2905 PHE PHE A . n A 1 139 LYS 139 2906 2906 LYS LYS A . n A 1 140 ALA 140 2907 2907 ALA ALA A . n A 1 141 SER 141 2908 2908 SER SER A . n A 1 142 ARG 142 2909 2909 ARG ARG A . n A 1 143 SER 143 2910 2910 SER SER A . n A 1 144 HIS 144 2911 2911 HIS HIS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HAF 1 3001 1 HAF LIG A . C 3 HOH 1 3101 27 HOH HOH A . C 3 HOH 2 3102 18 HOH HOH A . C 3 HOH 3 3103 34 HOH HOH A . C 3 HOH 4 3104 19 HOH HOH A . C 3 HOH 5 3105 9 HOH HOH A . C 3 HOH 6 3106 23 HOH HOH A . C 3 HOH 7 3107 10 HOH HOH A . C 3 HOH 8 3108 24 HOH HOH A . C 3 HOH 9 3109 38 HOH HOH A . C 3 HOH 10 3110 25 HOH HOH A . C 3 HOH 11 3111 30 HOH HOH A . C 3 HOH 12 3112 31 HOH HOH A . C 3 HOH 13 3113 15 HOH HOH A . C 3 HOH 14 3114 17 HOH HOH A . C 3 HOH 15 3115 29 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-10-20 2 'Structure model' 1 1 2023-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' pdbx_initial_refinement_model # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.12_2829 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _pdbx_entry_details.entry_id 7DMY _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HH A TYR 2807 ? ? O A TYR 2860 ? ? 1.42 2 1 O A VAL 2830 ? ? HH A TYR 2839 ? ? 1.48 3 1 OE1 A GLU 2804 ? ? HH21 A ARG 2858 ? ? 1.49 4 1 OH A TYR 2807 ? ? O A TYR 2860 ? ? 1.96 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 2812 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 2812 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 2812 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.83 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.53 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 2831 ? ? -47.66 108.01 2 1 SER A 2910 ? ? -77.93 47.46 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A SER 2896 ? CB A A SER 129 CB 2 1 Y 0 A SER 2896 ? OG A A SER 129 OG # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 2768 ? A MET 1 2 1 Y 1 A HIS 2769 ? A HIS 2 3 1 Y 1 A HIS 2770 ? A HIS 3 4 1 Y 1 A HIS 2771 ? A HIS 4 5 1 Y 1 A HIS 2772 ? A HIS 5 6 1 Y 1 A HIS 2773 ? A HIS 6 7 1 Y 1 A HIS 2774 ? A HIS 7 8 1 Y 1 A SER 2775 ? A SER 8 9 1 Y 1 A SER 2776 ? A SER 9 10 1 Y 1 A GLY 2777 ? A GLY 10 11 1 Y 1 A VAL 2778 ? A VAL 11 12 1 Y 1 A ASP 2779 ? A ASP 12 13 1 Y 1 A LEU 2780 ? A LEU 13 14 1 Y 1 A GLY 2781 ? A GLY 14 15 1 Y 1 A THR 2782 ? A THR 15 16 1 Y 1 A GLU 2783 ? A GLU 16 17 1 Y 1 A ASN 2784 ? A ASN 17 18 1 Y 1 A LEU 2785 ? A LEU 18 19 1 Y 1 A TYR 2786 ? A TYR 19 20 1 Y 1 A PHE 2787 ? A PHE 20 21 1 Y 1 A GLN 2788 ? A GLN 21 22 1 Y 1 A SER 2789 ? A SER 22 23 1 Y 1 A MET 2790 ? A MET 23 24 1 Y 1 A SER 2791 ? A SER 24 25 1 Y 1 A THR 2792 ? A THR 25 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HAF C15 C N N 137 HAF C20 C N N 138 HAF C24 C N N 139 HAF C26 C N N 140 HAF C28 C Y N 141 HAF C1 C N N 142 HAF C3 C N N 143 HAF C4 C N R 144 HAF C5 C N N 145 HAF C6 C N R 146 HAF C7 C N N 147 HAF C9 C N N 148 HAF C11 C N N 149 HAF C12 C N N 150 HAF C14 C N N 151 HAF C16 C N N 152 HAF C19 C N N 153 HAF C23 C N N 154 HAF C25 C N N 155 HAF C27 C Y N 156 HAF C29 C Y N 157 HAF C30 C Y N 158 HAF C31 C Y N 159 HAF C32 C Y N 160 HAF N2 N N N 161 HAF N8 N N N 162 HAF N10 N N N 163 HAF N13 N N N 164 HAF N18 N N N 165 HAF O17 O N N 166 HAF O21 O N N 167 HAF O22 O N N 168 HAF H243 H N N 169 HAF H241 H N N 170 HAF H242 H N N 171 HAF H262 H N N 172 HAF H263 H N N 173 HAF H261 H N N 174 HAF H281 H N N 175 HAF H012 H N N 176 HAF H011 H N N 177 HAF H013 H N N 178 HAF H032 H N N 179 HAF H031 H N N 180 HAF H041 H N N 181 HAF H052 H N N 182 HAF H051 H N N 183 HAF H061 H N N 184 HAF H071 H N N 185 HAF H072 H N N 186 HAF H122 H N N 187 HAF H121 H N N 188 HAF H141 H N N 189 HAF H142 H N N 190 HAF H192 H N N 191 HAF H193 H N N 192 HAF H191 H N N 193 HAF H253 H N N 194 HAF H252 H N N 195 HAF H251 H N N 196 HAF H291 H N N 197 HAF H301 H N N 198 HAF H311 H N N 199 HAF H321 H N N 200 HAF H081 H N N 201 HIS N N N N 202 HIS CA C N S 203 HIS C C N N 204 HIS O O N N 205 HIS CB C N N 206 HIS CG C Y N 207 HIS ND1 N Y N 208 HIS CD2 C Y N 209 HIS CE1 C Y N 210 HIS NE2 N Y N 211 HIS OXT O N N 212 HIS H H N N 213 HIS H2 H N N 214 HIS HA H N N 215 HIS HB2 H N N 216 HIS HB3 H N N 217 HIS HD1 H N N 218 HIS HD2 H N N 219 HIS HE1 H N N 220 HIS HE2 H N N 221 HIS HXT H N N 222 HOH O O N N 223 HOH H1 H N N 224 HOH H2 H N N 225 ILE N N N N 226 ILE CA C N S 227 ILE C C N N 228 ILE O O N N 229 ILE CB C N S 230 ILE CG1 C N N 231 ILE CG2 C N N 232 ILE CD1 C N N 233 ILE OXT O N N 234 ILE H H N N 235 ILE H2 H N N 236 ILE HA H N N 237 ILE HB H N N 238 ILE HG12 H N N 239 ILE HG13 H N N 240 ILE HG21 H N N 241 ILE HG22 H N N 242 ILE HG23 H N N 243 ILE HD11 H N N 244 ILE HD12 H N N 245 ILE HD13 H N N 246 ILE HXT H N N 247 LEU N N N N 248 LEU CA C N S 249 LEU C C N N 250 LEU O O N N 251 LEU CB C N N 252 LEU CG C N N 253 LEU CD1 C N N 254 LEU CD2 C N N 255 LEU OXT O N N 256 LEU H H N N 257 LEU H2 H N N 258 LEU HA H N N 259 LEU HB2 H N N 260 LEU HB3 H N N 261 LEU HG H N N 262 LEU HD11 H N N 263 LEU HD12 H N N 264 LEU HD13 H N N 265 LEU HD21 H N N 266 LEU HD22 H N N 267 LEU HD23 H N N 268 LEU HXT H N N 269 LYS N N N N 270 LYS CA C N S 271 LYS C C N N 272 LYS O O N N 273 LYS CB C N N 274 LYS CG C N N 275 LYS CD C N N 276 LYS CE C N N 277 LYS NZ N N N 278 LYS OXT O N N 279 LYS H H N N 280 LYS H2 H N N 281 LYS HA H N N 282 LYS HB2 H N N 283 LYS HB3 H N N 284 LYS HG2 H N N 285 LYS HG3 H N N 286 LYS HD2 H N N 287 LYS HD3 H N N 288 LYS HE2 H N N 289 LYS HE3 H N N 290 LYS HZ1 H N N 291 LYS HZ2 H N N 292 LYS HZ3 H N N 293 LYS HXT H N N 294 MET N N N N 295 MET CA C N S 296 MET C C N N 297 MET O O N N 298 MET CB C N N 299 MET CG C N N 300 MET SD S N N 301 MET CE C N N 302 MET OXT O N N 303 MET H H N N 304 MET H2 H N N 305 MET HA H N N 306 MET HB2 H N N 307 MET HB3 H N N 308 MET HG2 H N N 309 MET HG3 H N N 310 MET HE1 H N N 311 MET HE2 H N N 312 MET HE3 H N N 313 MET HXT H N N 314 PHE N N N N 315 PHE CA C N S 316 PHE C C N N 317 PHE O O N N 318 PHE CB C N N 319 PHE CG C Y N 320 PHE CD1 C Y N 321 PHE CD2 C Y N 322 PHE CE1 C Y N 323 PHE CE2 C Y N 324 PHE CZ C Y N 325 PHE OXT O N N 326 PHE H H N N 327 PHE H2 H N N 328 PHE HA H N N 329 PHE HB2 H N N 330 PHE HB3 H N N 331 PHE HD1 H N N 332 PHE HD2 H N N 333 PHE HE1 H N N 334 PHE HE2 H N N 335 PHE HZ H N N 336 PHE HXT H N N 337 PRO N N N N 338 PRO CA C N S 339 PRO C C N N 340 PRO O O N N 341 PRO CB C N N 342 PRO CG C N N 343 PRO CD C N N 344 PRO OXT O N N 345 PRO H H N N 346 PRO HA H N N 347 PRO HB2 H N N 348 PRO HB3 H N N 349 PRO HG2 H N N 350 PRO HG3 H N N 351 PRO HD2 H N N 352 PRO HD3 H N N 353 PRO HXT H N N 354 SER N N N N 355 SER CA C N S 356 SER C C N N 357 SER O O N N 358 SER CB C N N 359 SER OG O N N 360 SER OXT O N N 361 SER H H N N 362 SER H2 H N N 363 SER HA H N N 364 SER HB2 H N N 365 SER HB3 H N N 366 SER HG H N N 367 SER HXT H N N 368 THR N N N N 369 THR CA C N S 370 THR C C N N 371 THR O O N N 372 THR CB C N R 373 THR OG1 O N N 374 THR CG2 C N N 375 THR OXT O N N 376 THR H H N N 377 THR H2 H N N 378 THR HA H N N 379 THR HB H N N 380 THR HG1 H N N 381 THR HG21 H N N 382 THR HG22 H N N 383 THR HG23 H N N 384 THR HXT H N N 385 TRP N N N N 386 TRP CA C N S 387 TRP C C N N 388 TRP O O N N 389 TRP CB C N N 390 TRP CG C Y N 391 TRP CD1 C Y N 392 TRP CD2 C Y N 393 TRP NE1 N Y N 394 TRP CE2 C Y N 395 TRP CE3 C Y N 396 TRP CZ2 C Y N 397 TRP CZ3 C Y N 398 TRP CH2 C Y N 399 TRP OXT O N N 400 TRP H H N N 401 TRP H2 H N N 402 TRP HA H N N 403 TRP HB2 H N N 404 TRP HB3 H N N 405 TRP HD1 H N N 406 TRP HE1 H N N 407 TRP HE3 H N N 408 TRP HZ2 H N N 409 TRP HZ3 H N N 410 TRP HH2 H N N 411 TRP HXT H N N 412 TYR N N N N 413 TYR CA C N S 414 TYR C C N N 415 TYR O O N N 416 TYR CB C N N 417 TYR CG C Y N 418 TYR CD1 C Y N 419 TYR CD2 C Y N 420 TYR CE1 C Y N 421 TYR CE2 C Y N 422 TYR CZ C Y N 423 TYR OH O N N 424 TYR OXT O N N 425 TYR H H N N 426 TYR H2 H N N 427 TYR HA H N N 428 TYR HB2 H N N 429 TYR HB3 H N N 430 TYR HD1 H N N 431 TYR HD2 H N N 432 TYR HE1 H N N 433 TYR HE2 H N N 434 TYR HH H N N 435 TYR HXT H N N 436 VAL N N N N 437 VAL CA C N S 438 VAL C C N N 439 VAL O O N N 440 VAL CB C N N 441 VAL CG1 C N N 442 VAL CG2 C N N 443 VAL OXT O N N 444 VAL H H N N 445 VAL H2 H N N 446 VAL HA H N N 447 VAL HB H N N 448 VAL HG11 H N N 449 VAL HG12 H N N 450 VAL HG13 H N N 451 VAL HG21 H N N 452 VAL HG22 H N N 453 VAL HG23 H N N 454 VAL HXT H N N 455 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HAF C30 C29 doub Y N 129 HAF C30 C31 sing Y N 130 HAF C29 C28 sing Y N 131 HAF C31 C32 doub Y N 132 HAF C28 C27 doub Y N 133 HAF C32 C27 sing Y N 134 HAF C27 C4 sing N N 135 HAF C3 C4 sing N N 136 HAF C3 N2 sing N N 137 HAF C4 C5 sing N N 138 HAF C5 C6 sing N N 139 HAF C1 N2 sing N N 140 HAF N2 C7 sing N N 141 HAF C7 C6 sing N N 142 HAF C6 N8 sing N N 143 HAF N8 C9 sing N N 144 HAF C9 N10 doub N N 145 HAF C9 N18 sing N N 146 HAF N10 C11 sing N N 147 HAF C19 N18 sing N N 148 HAF N18 C16 sing N N 149 HAF C11 C12 sing N N 150 HAF C11 C15 doub N N 151 HAF C16 C15 sing N N 152 HAF C16 O17 doub N N 153 HAF C12 N13 sing N N 154 HAF C15 C14 sing N N 155 HAF N13 C14 sing N N 156 HAF N13 C20 sing N N 157 HAF O22 C20 sing N N 158 HAF O22 C23 sing N N 159 HAF C25 C23 sing N N 160 HAF C20 O21 doub N N 161 HAF C23 C26 sing N N 162 HAF C23 C24 sing N N 163 HAF C24 H243 sing N N 164 HAF C24 H241 sing N N 165 HAF C24 H242 sing N N 166 HAF C26 H262 sing N N 167 HAF C26 H263 sing N N 168 HAF C26 H261 sing N N 169 HAF C28 H281 sing N N 170 HAF C1 H012 sing N N 171 HAF C1 H011 sing N N 172 HAF C1 H013 sing N N 173 HAF C3 H032 sing N N 174 HAF C3 H031 sing N N 175 HAF C4 H041 sing N N 176 HAF C5 H052 sing N N 177 HAF C5 H051 sing N N 178 HAF C6 H061 sing N N 179 HAF C7 H071 sing N N 180 HAF C7 H072 sing N N 181 HAF C12 H122 sing N N 182 HAF C12 H121 sing N N 183 HAF C14 H141 sing N N 184 HAF C14 H142 sing N N 185 HAF C19 H192 sing N N 186 HAF C19 H193 sing N N 187 HAF C19 H191 sing N N 188 HAF C25 H253 sing N N 189 HAF C25 H252 sing N N 190 HAF C25 H251 sing N N 191 HAF C29 H291 sing N N 192 HAF C30 H301 sing N N 193 HAF C31 H311 sing N N 194 HAF C32 H321 sing N N 195 HAF N8 H081 sing N N 196 HIS N CA sing N N 197 HIS N H sing N N 198 HIS N H2 sing N N 199 HIS CA C sing N N 200 HIS CA CB sing N N 201 HIS CA HA sing N N 202 HIS C O doub N N 203 HIS C OXT sing N N 204 HIS CB CG sing N N 205 HIS CB HB2 sing N N 206 HIS CB HB3 sing N N 207 HIS CG ND1 sing Y N 208 HIS CG CD2 doub Y N 209 HIS ND1 CE1 doub Y N 210 HIS ND1 HD1 sing N N 211 HIS CD2 NE2 sing Y N 212 HIS CD2 HD2 sing N N 213 HIS CE1 NE2 sing Y N 214 HIS CE1 HE1 sing N N 215 HIS NE2 HE2 sing N N 216 HIS OXT HXT sing N N 217 HOH O H1 sing N N 218 HOH O H2 sing N N 219 ILE N CA sing N N 220 ILE N H sing N N 221 ILE N H2 sing N N 222 ILE CA C sing N N 223 ILE CA CB sing N N 224 ILE CA HA sing N N 225 ILE C O doub N N 226 ILE C OXT sing N N 227 ILE CB CG1 sing N N 228 ILE CB CG2 sing N N 229 ILE CB HB sing N N 230 ILE CG1 CD1 sing N N 231 ILE CG1 HG12 sing N N 232 ILE CG1 HG13 sing N N 233 ILE CG2 HG21 sing N N 234 ILE CG2 HG22 sing N N 235 ILE CG2 HG23 sing N N 236 ILE CD1 HD11 sing N N 237 ILE CD1 HD12 sing N N 238 ILE CD1 HD13 sing N N 239 ILE OXT HXT sing N N 240 LEU N CA sing N N 241 LEU N H sing N N 242 LEU N H2 sing N N 243 LEU CA C sing N N 244 LEU CA CB sing N N 245 LEU CA HA sing N N 246 LEU C O doub N N 247 LEU C OXT sing N N 248 LEU CB CG sing N N 249 LEU CB HB2 sing N N 250 LEU CB HB3 sing N N 251 LEU CG CD1 sing N N 252 LEU CG CD2 sing N N 253 LEU CG HG sing N N 254 LEU CD1 HD11 sing N N 255 LEU CD1 HD12 sing N N 256 LEU CD1 HD13 sing N N 257 LEU CD2 HD21 sing N N 258 LEU CD2 HD22 sing N N 259 LEU CD2 HD23 sing N N 260 LEU OXT HXT sing N N 261 LYS N CA sing N N 262 LYS N H sing N N 263 LYS N H2 sing N N 264 LYS CA C sing N N 265 LYS CA CB sing N N 266 LYS CA HA sing N N 267 LYS C O doub N N 268 LYS C OXT sing N N 269 LYS CB CG sing N N 270 LYS CB HB2 sing N N 271 LYS CB HB3 sing N N 272 LYS CG CD sing N N 273 LYS CG HG2 sing N N 274 LYS CG HG3 sing N N 275 LYS CD CE sing N N 276 LYS CD HD2 sing N N 277 LYS CD HD3 sing N N 278 LYS CE NZ sing N N 279 LYS CE HE2 sing N N 280 LYS CE HE3 sing N N 281 LYS NZ HZ1 sing N N 282 LYS NZ HZ2 sing N N 283 LYS NZ HZ3 sing N N 284 LYS OXT HXT sing N N 285 MET N CA sing N N 286 MET N H sing N N 287 MET N H2 sing N N 288 MET CA C sing N N 289 MET CA CB sing N N 290 MET CA HA sing N N 291 MET C O doub N N 292 MET C OXT sing N N 293 MET CB CG sing N N 294 MET CB HB2 sing N N 295 MET CB HB3 sing N N 296 MET CG SD sing N N 297 MET CG HG2 sing N N 298 MET CG HG3 sing N N 299 MET SD CE sing N N 300 MET CE HE1 sing N N 301 MET CE HE2 sing N N 302 MET CE HE3 sing N N 303 MET OXT HXT sing N N 304 PHE N CA sing N N 305 PHE N H sing N N 306 PHE N H2 sing N N 307 PHE CA C sing N N 308 PHE CA CB sing N N 309 PHE CA HA sing N N 310 PHE C O doub N N 311 PHE C OXT sing N N 312 PHE CB CG sing N N 313 PHE CB HB2 sing N N 314 PHE CB HB3 sing N N 315 PHE CG CD1 doub Y N 316 PHE CG CD2 sing Y N 317 PHE CD1 CE1 sing Y N 318 PHE CD1 HD1 sing N N 319 PHE CD2 CE2 doub Y N 320 PHE CD2 HD2 sing N N 321 PHE CE1 CZ doub Y N 322 PHE CE1 HE1 sing N N 323 PHE CE2 CZ sing Y N 324 PHE CE2 HE2 sing N N 325 PHE CZ HZ sing N N 326 PHE OXT HXT sing N N 327 PRO N CA sing N N 328 PRO N CD sing N N 329 PRO N H sing N N 330 PRO CA C sing N N 331 PRO CA CB sing N N 332 PRO CA HA sing N N 333 PRO C O doub N N 334 PRO C OXT sing N N 335 PRO CB CG sing N N 336 PRO CB HB2 sing N N 337 PRO CB HB3 sing N N 338 PRO CG CD sing N N 339 PRO CG HG2 sing N N 340 PRO CG HG3 sing N N 341 PRO CD HD2 sing N N 342 PRO CD HD3 sing N N 343 PRO OXT HXT sing N N 344 SER N CA sing N N 345 SER N H sing N N 346 SER N H2 sing N N 347 SER CA C sing N N 348 SER CA CB sing N N 349 SER CA HA sing N N 350 SER C O doub N N 351 SER C OXT sing N N 352 SER CB OG sing N N 353 SER CB HB2 sing N N 354 SER CB HB3 sing N N 355 SER OG HG sing N N 356 SER OXT HXT sing N N 357 THR N CA sing N N 358 THR N H sing N N 359 THR N H2 sing N N 360 THR CA C sing N N 361 THR CA CB sing N N 362 THR CA HA sing N N 363 THR C O doub N N 364 THR C OXT sing N N 365 THR CB OG1 sing N N 366 THR CB CG2 sing N N 367 THR CB HB sing N N 368 THR OG1 HG1 sing N N 369 THR CG2 HG21 sing N N 370 THR CG2 HG22 sing N N 371 THR CG2 HG23 sing N N 372 THR OXT HXT sing N N 373 TRP N CA sing N N 374 TRP N H sing N N 375 TRP N H2 sing N N 376 TRP CA C sing N N 377 TRP CA CB sing N N 378 TRP CA HA sing N N 379 TRP C O doub N N 380 TRP C OXT sing N N 381 TRP CB CG sing N N 382 TRP CB HB2 sing N N 383 TRP CB HB3 sing N N 384 TRP CG CD1 doub Y N 385 TRP CG CD2 sing Y N 386 TRP CD1 NE1 sing Y N 387 TRP CD1 HD1 sing N N 388 TRP CD2 CE2 doub Y N 389 TRP CD2 CE3 sing Y N 390 TRP NE1 CE2 sing Y N 391 TRP NE1 HE1 sing N N 392 TRP CE2 CZ2 sing Y N 393 TRP CE3 CZ3 doub Y N 394 TRP CE3 HE3 sing N N 395 TRP CZ2 CH2 doub Y N 396 TRP CZ2 HZ2 sing N N 397 TRP CZ3 CH2 sing Y N 398 TRP CZ3 HZ3 sing N N 399 TRP CH2 HH2 sing N N 400 TRP OXT HXT sing N N 401 TYR N CA sing N N 402 TYR N H sing N N 403 TYR N H2 sing N N 404 TYR CA C sing N N 405 TYR CA CB sing N N 406 TYR CA HA sing N N 407 TYR C O doub N N 408 TYR C OXT sing N N 409 TYR CB CG sing N N 410 TYR CB HB2 sing N N 411 TYR CB HB3 sing N N 412 TYR CG CD1 doub Y N 413 TYR CG CD2 sing Y N 414 TYR CD1 CE1 sing Y N 415 TYR CD1 HD1 sing N N 416 TYR CD2 CE2 doub Y N 417 TYR CD2 HD2 sing N N 418 TYR CE1 CZ doub Y N 419 TYR CE1 HE1 sing N N 420 TYR CE2 CZ sing Y N 421 TYR CE2 HE2 sing N N 422 TYR CZ OH sing N N 423 TYR OH HH sing N N 424 TYR OXT HXT sing N N 425 VAL N CA sing N N 426 VAL N H sing N N 427 VAL N H2 sing N N 428 VAL CA C sing N N 429 VAL CA CB sing N N 430 VAL CA HA sing N N 431 VAL C O doub N N 432 VAL C OXT sing N N 433 VAL CB CG1 sing N N 434 VAL CB CG2 sing N N 435 VAL CB HB sing N N 436 VAL CG1 HG11 sing N N 437 VAL CG1 HG12 sing N N 438 VAL CG1 HG13 sing N N 439 VAL CG2 HG21 sing N N 440 VAL CG2 HG22 sing N N 441 VAL CG2 HG23 sing N N 442 VAL OXT HXT sing N N 443 # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 81930125 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id HAF _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id HAF _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;tert-butyl 3-methyl-2-[[(3R,5R)-1-methyl-5-phenyl-piperidin-3-yl]amino]-4-oxidanylidene-5,7-dihydropyrrolo[3,4-d]pyrimidine-6-carboxylate ; HAF 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3UV2 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'isothermal titration calorimetry' _pdbx_struct_assembly_auth_evidence.details ? #