data_7JKZ # _entry.id 7JKZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7JKZ pdb_00007jkz 10.2210/pdb7jkz/pdb WWPDB D_1000250987 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7JKZ _pdbx_database_status.recvd_initial_deposition_date 2020-07-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ratia, K.M.' 1 0000-0002-4834-9207 'Xiong, R.' 2 0000-0002-6350-9037 'Li, Y.' 3 0000-0002-4780-6154 'Shen, Z.' 4 ? 'Zhao, J.' 5 ? 'Huang, F.' 6 ? 'Dubrovyskyii, O.' 7 ? 'Thatcher, G.R.' 8 0000-0002-7757-1739 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Med.Chem. _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 0022-2623 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 63 _citation.language ? _citation.page_first 7186 _citation.page_last 7210 _citation.title ;Novel Pyrrolopyridone Bromodomain and Extra-Terminal Motif (BET) Inhibitors Effective in Endocrine-Resistant ER+ Breast Cancer with Acquired Resistance to Fulvestrant and Palbociclib. ; _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.0c00456 _citation.pdbx_database_id_PubMed 32453591 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, Y.' 1 ? primary 'Zhao, J.' 2 ? primary 'Gutgesell, L.M.' 3 0000-0002-7645-9227 primary 'Shen, Z.' 4 ? primary 'Ratia, K.' 5 ? primary 'Dye, K.' 6 ? primary 'Dubrovskyi, O.' 7 ? primary 'Zhao, H.' 8 ? primary 'Huang, F.' 9 ? primary 'Tonetti, D.A.' 10 ? primary 'Thatcher, G.R.J.' 11 0000-0002-7757-1739 primary 'Xiong, R.' 12 0000-0002-6350-9037 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 7JKZ _cell.details ? _cell.formula_units_Z ? _cell.length_a 63.010 _cell.length_a_esd ? _cell.length_b 63.010 _cell.length_b_esd ? _cell.length_c 102.722 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JKZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bromodomain-containing protein 4' 15060.332 1 ? ? ? ? 2 non-polymer syn ;N-(1-[1,1-di(pyridin-2-yl)ethyl]-6-{1-methyl-6-oxo-5-[(piperidin-4-yl)amino]-1,6-dihydropyridin-3-yl}-1H-indol-4-yl)ethanesulfonamide ; 611.757 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 5 water nat water 18.015 34 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Protein HUNK1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE ; _entity_poly.pdbx_seq_one_letter_code_can ;SMKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 LYS n 1 4 ASP n 1 5 VAL n 1 6 PRO n 1 7 ASP n 1 8 SER n 1 9 GLN n 1 10 GLN n 1 11 HIS n 1 12 PRO n 1 13 ALA n 1 14 PRO n 1 15 GLU n 1 16 LYS n 1 17 SER n 1 18 SER n 1 19 LYS n 1 20 VAL n 1 21 SER n 1 22 GLU n 1 23 GLN n 1 24 LEU n 1 25 LYS n 1 26 CYS n 1 27 CYS n 1 28 SER n 1 29 GLY n 1 30 ILE n 1 31 LEU n 1 32 LYS n 1 33 GLU n 1 34 MET n 1 35 PHE n 1 36 ALA n 1 37 LYS n 1 38 LYS n 1 39 HIS n 1 40 ALA n 1 41 ALA n 1 42 TYR n 1 43 ALA n 1 44 TRP n 1 45 PRO n 1 46 PHE n 1 47 TYR n 1 48 LYS n 1 49 PRO n 1 50 VAL n 1 51 ASP n 1 52 VAL n 1 53 GLU n 1 54 ALA n 1 55 LEU n 1 56 GLY n 1 57 LEU n 1 58 HIS n 1 59 ASP n 1 60 TYR n 1 61 CYS n 1 62 ASP n 1 63 ILE n 1 64 ILE n 1 65 LYS n 1 66 HIS n 1 67 PRO n 1 68 MET n 1 69 ASP n 1 70 MET n 1 71 SER n 1 72 THR n 1 73 ILE n 1 74 LYS n 1 75 SER n 1 76 LYS n 1 77 LEU n 1 78 GLU n 1 79 ALA n 1 80 ARG n 1 81 GLU n 1 82 TYR n 1 83 ARG n 1 84 ASP n 1 85 ALA n 1 86 GLN n 1 87 GLU n 1 88 PHE n 1 89 GLY n 1 90 ALA n 1 91 ASP n 1 92 VAL n 1 93 ARG n 1 94 LEU n 1 95 MET n 1 96 PHE n 1 97 SER n 1 98 ASN n 1 99 CYS n 1 100 TYR n 1 101 LYS n 1 102 TYR n 1 103 ASN n 1 104 PRO n 1 105 PRO n 1 106 ASP n 1 107 HIS n 1 108 GLU n 1 109 VAL n 1 110 VAL n 1 111 ALA n 1 112 MET n 1 113 ALA n 1 114 ARG n 1 115 LYS n 1 116 LEU n 1 117 GLN n 1 118 ASP n 1 119 VAL n 1 120 PHE n 1 121 GLU n 1 122 MET n 1 123 ARG n 1 124 PHE n 1 125 ALA n 1 126 LYS n 1 127 MET n 1 128 PRO n 1 129 ASP n 1 130 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 130 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BRD4, HUNK1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BRD4_HUMAN _struct_ref.pdbx_db_accession O60885 _struct_ref.pdbx_db_isoform O60885-2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREY RDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE ; _struct_ref.pdbx_align_begin 333 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7JKZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 130 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O60885 _struct_ref_seq.db_align_beg 333 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 460 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 333 _struct_ref_seq.pdbx_auth_seq_align_end 460 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7JKZ SER A 1 ? UNP O60885 ? ? 'expression tag' 331 1 1 7JKZ MET A 2 ? UNP O60885 ? ? 'expression tag' 332 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 YF6 non-polymer . ;N-(1-[1,1-di(pyridin-2-yl)ethyl]-6-{1-methyl-6-oxo-5-[(piperidin-4-yl)amino]-1,6-dihydropyridin-3-yl}-1H-indol-4-yl)ethanesulfonamide ; ? 'C33 H37 N7 O3 S' 611.757 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7JKZ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.36 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 63.37 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 290 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M (NH4)2SO4, 0.1M Na cacodylate pH 6.5, 30% PEG 8000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-07-20 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.12713 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-D' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.12713 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-D _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7JKZ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.49 _reflns.d_resolution_low 54.57 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8677 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 9.1 _reflns.pdbx_Rmerge_I_obs 0.079 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.3 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.96 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.084 _reflns.pdbx_Rpim_I_all 0.028 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.49 _reflns_shell.d_res_low 2.59 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 4.9 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 958 _reflns_shell.percent_possible_all 99.9 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.442 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 9.8 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 0.85 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.466 _reflns_shell.pdbx_Rpim_I_all 0.147 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 1.1400 _refine.aniso_B[1][2] 0.5700 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 1.1400 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -3.7000 _refine.B_iso_max 131.500 _refine.B_iso_mean 50.9050 _refine.B_iso_min 34.120 _refine.correlation_coeff_Fo_to_Fc 0.9550 _refine.correlation_coeff_Fo_to_Fc_free 0.9210 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7JKZ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.4900 _refine.ls_d_res_low 54.5700 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8193 _refine.ls_number_reflns_R_free 452 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.6000 _refine.ls_percent_reflns_R_free 5.2000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1816 _refine.ls_R_factor_R_free 0.2121 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1800 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 2OUO _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.2220 _refine.pdbx_overall_ESU_R_Free 0.1880 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 5.7410 _refine.overall_SU_ML 0.1270 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.4900 _refine_hist.d_res_low 54.5700 _refine_hist.number_atoms_solvent 34 _refine_hist.number_atoms_total 993 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 111 _refine_hist.pdbx_B_iso_mean_ligand 52.20 _refine_hist.pdbx_B_iso_mean_solvent 51.50 _refine_hist.pdbx_number_atoms_protein 905 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 54 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.012 0.013 989 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.017 915 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.683 1.656 1332 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.343 1.587 2127 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.419 5.000 112 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 34.468 22.449 49 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 17.287 15.000 174 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 22.747 15.000 5 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.087 0.200 117 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.010 0.020 1067 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 214 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.4910 _refine_ls_shell.d_res_low 2.5560 _refine_ls_shell.number_reflns_all 610 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 20 _refine_ls_shell.number_reflns_R_work 590 _refine_ls_shell.percent_reflns_obs 99.8400 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2110 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2370 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 7JKZ _struct.title 'Bromodomain-containing protein 4 (BRD4) bromodomain 2 (BD2) complexed with YF3-126' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7JKZ _struct_keywords.text 'Selective BRD4-BD1 inhibitor, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 21 ? PHE A 35 ? SER A 351 PHE A 365 1 ? 15 HELX_P HELX_P2 AA2 ALA A 36 ? LYS A 38 ? ALA A 366 LYS A 368 5 ? 3 HELX_P HELX_P3 AA3 HIS A 39 ? TRP A 44 ? HIS A 369 TRP A 374 1 ? 6 HELX_P HELX_P4 AA4 PRO A 45 ? TYR A 47 ? PRO A 375 TYR A 377 5 ? 3 HELX_P HELX_P5 AA5 ASP A 51 ? GLY A 56 ? ASP A 381 GLY A 386 1 ? 6 HELX_P HELX_P6 AA6 ASP A 59 ? ILE A 64 ? ASP A 389 ILE A 394 1 ? 6 HELX_P HELX_P7 AA7 ASP A 69 ? ALA A 79 ? ASP A 399 ALA A 409 1 ? 11 HELX_P HELX_P8 AA8 ASP A 84 ? ASN A 103 ? ASP A 414 ASN A 433 1 ? 20 HELX_P HELX_P9 AA9 HIS A 107 ? LYS A 126 ? HIS A 437 LYS A 456 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A YF6 501 ? 19 'binding site for residue YF6 A 501' AC2 Software A EDO 502 ? 1 'binding site for residue EDO A 502' AC3 Software A GOL 503 ? 5 'binding site for residue GOL A 503' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 19 VAL A 20 ? VAL A 350 . ? 4_455 ? 2 AC1 19 LEU A 24 ? LEU A 354 . ? 4_455 ? 3 AC1 19 LYS A 25 ? LYS A 355 . ? 4_455 ? 4 AC1 19 TRP A 44 ? TRP A 374 . ? 1_555 ? 5 AC1 19 PRO A 45 ? PRO A 375 . ? 1_555 ? 6 AC1 19 PHE A 46 ? PHE A 376 . ? 1_555 ? 7 AC1 19 LYS A 48 ? LYS A 378 . ? 1_555 ? 8 AC1 19 PRO A 49 ? PRO A 379 . ? 1_555 ? 9 AC1 19 VAL A 50 ? VAL A 380 . ? 1_555 ? 10 AC1 19 ASP A 51 ? ASP A 381 . ? 1_555 ? 11 AC1 19 LEU A 57 ? LEU A 387 . ? 1_555 ? 12 AC1 19 LEU A 77 ? LEU A 407 . ? 4_455 ? 13 AC1 19 TYR A 102 ? TYR A 432 . ? 1_555 ? 14 AC1 19 ASN A 103 ? ASN A 433 . ? 1_555 ? 15 AC1 19 GOL D . ? GOL A 503 . ? 4_455 ? 16 AC1 19 HOH E . ? HOH A 607 . ? 1_555 ? 17 AC1 19 HOH E . ? HOH A 608 . ? 4_455 ? 18 AC1 19 HOH E . ? HOH A 619 . ? 1_555 ? 19 AC1 19 HOH E . ? HOH A 626 . ? 1_555 ? 20 AC2 1 LYS A 37 ? LYS A 367 . ? 1_555 ? 21 AC3 5 LYS A 32 ? LYS A 362 . ? 1_555 ? 22 AC3 5 LYS A 74 ? LYS A 404 . ? 1_555 ? 23 AC3 5 GLU A 78 ? GLU A 408 . ? 1_555 ? 24 AC3 5 HIS A 107 ? HIS A 437 . ? 4_565 ? 25 AC3 5 YF6 B . ? YF6 A 501 . ? 4_565 ? # _atom_sites.entry_id 7JKZ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.015870 _atom_sites.fract_transf_matrix[1][2] 0.009163 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018326 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009735 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 331 ? ? ? A . n A 1 2 MET 2 332 ? ? ? A . n A 1 3 LYS 3 333 ? ? ? A . n A 1 4 ASP 4 334 ? ? ? A . n A 1 5 VAL 5 335 ? ? ? A . n A 1 6 PRO 6 336 ? ? ? A . n A 1 7 ASP 7 337 ? ? ? A . n A 1 8 SER 8 338 ? ? ? A . n A 1 9 GLN 9 339 ? ? ? A . n A 1 10 GLN 10 340 ? ? ? A . n A 1 11 HIS 11 341 ? ? ? A . n A 1 12 PRO 12 342 ? ? ? A . n A 1 13 ALA 13 343 ? ? ? A . n A 1 14 PRO 14 344 ? ? ? A . n A 1 15 GLU 15 345 ? ? ? A . n A 1 16 LYS 16 346 ? ? ? A . n A 1 17 SER 17 347 ? ? ? A . n A 1 18 SER 18 348 ? ? ? A . n A 1 19 LYS 19 349 349 LYS LYS A . n A 1 20 VAL 20 350 350 VAL VAL A . n A 1 21 SER 21 351 351 SER SER A . n A 1 22 GLU 22 352 352 GLU GLU A . n A 1 23 GLN 23 353 353 GLN GLN A . n A 1 24 LEU 24 354 354 LEU LEU A . n A 1 25 LYS 25 355 355 LYS LYS A . n A 1 26 CYS 26 356 356 CYS CYS A . n A 1 27 CYS 27 357 357 CYS CYS A . n A 1 28 SER 28 358 358 SER SER A . n A 1 29 GLY 29 359 359 GLY GLY A . n A 1 30 ILE 30 360 360 ILE ILE A . n A 1 31 LEU 31 361 361 LEU LEU A . n A 1 32 LYS 32 362 362 LYS LYS A . n A 1 33 GLU 33 363 363 GLU GLU A . n A 1 34 MET 34 364 364 MET MET A . n A 1 35 PHE 35 365 365 PHE PHE A . n A 1 36 ALA 36 366 366 ALA ALA A . n A 1 37 LYS 37 367 367 LYS LYS A . n A 1 38 LYS 38 368 368 LYS LYS A . n A 1 39 HIS 39 369 369 HIS HIS A . n A 1 40 ALA 40 370 370 ALA ALA A . n A 1 41 ALA 41 371 371 ALA ALA A . n A 1 42 TYR 42 372 372 TYR TYR A . n A 1 43 ALA 43 373 373 ALA ALA A . n A 1 44 TRP 44 374 374 TRP TRP A . n A 1 45 PRO 45 375 375 PRO PRO A . n A 1 46 PHE 46 376 376 PHE PHE A . n A 1 47 TYR 47 377 377 TYR TYR A . n A 1 48 LYS 48 378 378 LYS LYS A . n A 1 49 PRO 49 379 379 PRO PRO A . n A 1 50 VAL 50 380 380 VAL VAL A . n A 1 51 ASP 51 381 381 ASP ASP A . n A 1 52 VAL 52 382 382 VAL VAL A . n A 1 53 GLU 53 383 383 GLU GLU A . n A 1 54 ALA 54 384 384 ALA ALA A . n A 1 55 LEU 55 385 385 LEU LEU A . n A 1 56 GLY 56 386 386 GLY GLY A . n A 1 57 LEU 57 387 387 LEU LEU A . n A 1 58 HIS 58 388 388 HIS HIS A . n A 1 59 ASP 59 389 389 ASP ASP A . n A 1 60 TYR 60 390 390 TYR TYR A . n A 1 61 CYS 61 391 391 CYS CYS A . n A 1 62 ASP 62 392 392 ASP ASP A . n A 1 63 ILE 63 393 393 ILE ILE A . n A 1 64 ILE 64 394 394 ILE ILE A . n A 1 65 LYS 65 395 395 LYS LYS A . n A 1 66 HIS 66 396 396 HIS HIS A . n A 1 67 PRO 67 397 397 PRO PRO A . n A 1 68 MET 68 398 398 MET MET A . n A 1 69 ASP 69 399 399 ASP ASP A . n A 1 70 MET 70 400 400 MET MET A . n A 1 71 SER 71 401 401 SER SER A . n A 1 72 THR 72 402 402 THR THR A . n A 1 73 ILE 73 403 403 ILE ILE A . n A 1 74 LYS 74 404 404 LYS LYS A . n A 1 75 SER 75 405 405 SER SER A . n A 1 76 LYS 76 406 406 LYS LYS A . n A 1 77 LEU 77 407 407 LEU LEU A . n A 1 78 GLU 78 408 408 GLU GLU A . n A 1 79 ALA 79 409 409 ALA ALA A . n A 1 80 ARG 80 410 410 ARG ARG A . n A 1 81 GLU 81 411 411 GLU GLU A . n A 1 82 TYR 82 412 412 TYR TYR A . n A 1 83 ARG 83 413 413 ARG ARG A . n A 1 84 ASP 84 414 414 ASP ASP A . n A 1 85 ALA 85 415 415 ALA ALA A . n A 1 86 GLN 86 416 416 GLN GLN A . n A 1 87 GLU 87 417 417 GLU GLU A . n A 1 88 PHE 88 418 418 PHE PHE A . n A 1 89 GLY 89 419 419 GLY GLY A . n A 1 90 ALA 90 420 420 ALA ALA A . n A 1 91 ASP 91 421 421 ASP ASP A . n A 1 92 VAL 92 422 422 VAL VAL A . n A 1 93 ARG 93 423 423 ARG ARG A . n A 1 94 LEU 94 424 424 LEU LEU A . n A 1 95 MET 95 425 425 MET MET A . n A 1 96 PHE 96 426 426 PHE PHE A . n A 1 97 SER 97 427 427 SER SER A . n A 1 98 ASN 98 428 428 ASN ASN A . n A 1 99 CYS 99 429 429 CYS CYS A . n A 1 100 TYR 100 430 430 TYR TYR A . n A 1 101 LYS 101 431 431 LYS LYS A . n A 1 102 TYR 102 432 432 TYR TYR A . n A 1 103 ASN 103 433 433 ASN ASN A . n A 1 104 PRO 104 434 434 PRO PRO A . n A 1 105 PRO 105 435 435 PRO PRO A . n A 1 106 ASP 106 436 436 ASP ASP A . n A 1 107 HIS 107 437 437 HIS HIS A . n A 1 108 GLU 108 438 438 GLU GLU A . n A 1 109 VAL 109 439 439 VAL VAL A . n A 1 110 VAL 110 440 440 VAL VAL A . n A 1 111 ALA 111 441 441 ALA ALA A . n A 1 112 MET 112 442 442 MET MET A . n A 1 113 ALA 113 443 443 ALA ALA A . n A 1 114 ARG 114 444 444 ARG ARG A . n A 1 115 LYS 115 445 445 LYS LYS A . n A 1 116 LEU 116 446 446 LEU LEU A . n A 1 117 GLN 117 447 447 GLN GLN A . n A 1 118 ASP 118 448 448 ASP ASP A . n A 1 119 VAL 119 449 449 VAL VAL A . n A 1 120 PHE 120 450 450 PHE PHE A . n A 1 121 GLU 121 451 451 GLU GLU A . n A 1 122 MET 122 452 452 MET MET A . n A 1 123 ARG 123 453 453 ARG ARG A . n A 1 124 PHE 124 454 454 PHE PHE A . n A 1 125 ALA 125 455 455 ALA ALA A . n A 1 126 LYS 126 456 456 LYS LYS A . n A 1 127 MET 127 457 457 MET MET A . n A 1 128 PRO 128 458 458 PRO PRO A . n A 1 129 ASP 129 459 459 ASP ASP A . n A 1 130 GLU 130 460 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 YF6 1 501 501 YF6 YF6 A . C 3 EDO 1 502 601 EDO EDO A . D 4 GOL 1 503 1 GOL GOL A . E 5 HOH 1 601 1 HOH HOH A . E 5 HOH 2 602 26 HOH HOH A . E 5 HOH 3 603 25 HOH HOH A . E 5 HOH 4 604 30 HOH HOH A . E 5 HOH 5 605 2 HOH HOH A . E 5 HOH 6 606 6 HOH HOH A . E 5 HOH 7 607 9 HOH HOH A . E 5 HOH 8 608 29 HOH HOH A . E 5 HOH 9 609 23 HOH HOH A . E 5 HOH 10 610 12 HOH HOH A . E 5 HOH 11 611 31 HOH HOH A . E 5 HOH 12 612 7 HOH HOH A . E 5 HOH 13 613 18 HOH HOH A . E 5 HOH 14 614 14 HOH HOH A . E 5 HOH 15 615 10 HOH HOH A . E 5 HOH 16 616 32 HOH HOH A . E 5 HOH 17 617 19 HOH HOH A . E 5 HOH 18 618 16 HOH HOH A . E 5 HOH 19 619 3 HOH HOH A . E 5 HOH 20 620 11 HOH HOH A . E 5 HOH 21 621 21 HOH HOH A . E 5 HOH 22 622 5 HOH HOH A . E 5 HOH 23 623 20 HOH HOH A . E 5 HOH 24 624 34 HOH HOH A . E 5 HOH 25 625 27 HOH HOH A . E 5 HOH 26 626 4 HOH HOH A . E 5 HOH 27 627 8 HOH HOH A . E 5 HOH 28 628 28 HOH HOH A . E 5 HOH 29 629 13 HOH HOH A . E 5 HOH 30 630 15 HOH HOH A . E 5 HOH 31 631 17 HOH HOH A . E 5 HOH 32 632 33 HOH HOH A . E 5 HOH 33 633 24 HOH HOH A . E 5 HOH 34 634 22 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-08-25 2 'Structure model' 1 1 2022-03-16 3 'Structure model' 1 2 2023-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0258 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 5 # _pdbx_entry_details.entry_id 7JKZ _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 331 ? A SER 1 2 1 Y 1 A MET 332 ? A MET 2 3 1 Y 1 A LYS 333 ? A LYS 3 4 1 Y 1 A ASP 334 ? A ASP 4 5 1 Y 1 A VAL 335 ? A VAL 5 6 1 Y 1 A PRO 336 ? A PRO 6 7 1 Y 1 A ASP 337 ? A ASP 7 8 1 Y 1 A SER 338 ? A SER 8 9 1 Y 1 A GLN 339 ? A GLN 9 10 1 Y 1 A GLN 340 ? A GLN 10 11 1 Y 1 A HIS 341 ? A HIS 11 12 1 Y 1 A PRO 342 ? A PRO 12 13 1 Y 1 A ALA 343 ? A ALA 13 14 1 Y 1 A PRO 344 ? A PRO 14 15 1 Y 1 A GLU 345 ? A GLU 15 16 1 Y 1 A LYS 346 ? A LYS 16 17 1 Y 1 A SER 347 ? A SER 17 18 1 Y 1 A SER 348 ? A SER 18 19 1 Y 1 A GLU 460 ? A GLU 130 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 GOL C1 C N N 147 GOL O1 O N N 148 GOL C2 C N N 149 GOL O2 O N N 150 GOL C3 C N N 151 GOL O3 O N N 152 GOL H11 H N N 153 GOL H12 H N N 154 GOL HO1 H N N 155 GOL H2 H N N 156 GOL HO2 H N N 157 GOL H31 H N N 158 GOL H32 H N N 159 GOL HO3 H N N 160 HIS N N N N 161 HIS CA C N S 162 HIS C C N N 163 HIS O O N N 164 HIS CB C N N 165 HIS CG C Y N 166 HIS ND1 N Y N 167 HIS CD2 C Y N 168 HIS CE1 C Y N 169 HIS NE2 N Y N 170 HIS OXT O N N 171 HIS H H N N 172 HIS H2 H N N 173 HIS HA H N N 174 HIS HB2 H N N 175 HIS HB3 H N N 176 HIS HD1 H N N 177 HIS HD2 H N N 178 HIS HE1 H N N 179 HIS HE2 H N N 180 HIS HXT H N N 181 HOH O O N N 182 HOH H1 H N N 183 HOH H2 H N N 184 ILE N N N N 185 ILE CA C N S 186 ILE C C N N 187 ILE O O N N 188 ILE CB C N S 189 ILE CG1 C N N 190 ILE CG2 C N N 191 ILE CD1 C N N 192 ILE OXT O N N 193 ILE H H N N 194 ILE H2 H N N 195 ILE HA H N N 196 ILE HB H N N 197 ILE HG12 H N N 198 ILE HG13 H N N 199 ILE HG21 H N N 200 ILE HG22 H N N 201 ILE HG23 H N N 202 ILE HD11 H N N 203 ILE HD12 H N N 204 ILE HD13 H N N 205 ILE HXT H N N 206 LEU N N N N 207 LEU CA C N S 208 LEU C C N N 209 LEU O O N N 210 LEU CB C N N 211 LEU CG C N N 212 LEU CD1 C N N 213 LEU CD2 C N N 214 LEU OXT O N N 215 LEU H H N N 216 LEU H2 H N N 217 LEU HA H N N 218 LEU HB2 H N N 219 LEU HB3 H N N 220 LEU HG H N N 221 LEU HD11 H N N 222 LEU HD12 H N N 223 LEU HD13 H N N 224 LEU HD21 H N N 225 LEU HD22 H N N 226 LEU HD23 H N N 227 LEU HXT H N N 228 LYS N N N N 229 LYS CA C N S 230 LYS C C N N 231 LYS O O N N 232 LYS CB C N N 233 LYS CG C N N 234 LYS CD C N N 235 LYS CE C N N 236 LYS NZ N N N 237 LYS OXT O N N 238 LYS H H N N 239 LYS H2 H N N 240 LYS HA H N N 241 LYS HB2 H N N 242 LYS HB3 H N N 243 LYS HG2 H N N 244 LYS HG3 H N N 245 LYS HD2 H N N 246 LYS HD3 H N N 247 LYS HE2 H N N 248 LYS HE3 H N N 249 LYS HZ1 H N N 250 LYS HZ2 H N N 251 LYS HZ3 H N N 252 LYS HXT H N N 253 MET N N N N 254 MET CA C N S 255 MET C C N N 256 MET O O N N 257 MET CB C N N 258 MET CG C N N 259 MET SD S N N 260 MET CE C N N 261 MET OXT O N N 262 MET H H N N 263 MET H2 H N N 264 MET HA H N N 265 MET HB2 H N N 266 MET HB3 H N N 267 MET HG2 H N N 268 MET HG3 H N N 269 MET HE1 H N N 270 MET HE2 H N N 271 MET HE3 H N N 272 MET HXT H N N 273 PHE N N N N 274 PHE CA C N S 275 PHE C C N N 276 PHE O O N N 277 PHE CB C N N 278 PHE CG C Y N 279 PHE CD1 C Y N 280 PHE CD2 C Y N 281 PHE CE1 C Y N 282 PHE CE2 C Y N 283 PHE CZ C Y N 284 PHE OXT O N N 285 PHE H H N N 286 PHE H2 H N N 287 PHE HA H N N 288 PHE HB2 H N N 289 PHE HB3 H N N 290 PHE HD1 H N N 291 PHE HD2 H N N 292 PHE HE1 H N N 293 PHE HE2 H N N 294 PHE HZ H N N 295 PHE HXT H N N 296 PRO N N N N 297 PRO CA C N S 298 PRO C C N N 299 PRO O O N N 300 PRO CB C N N 301 PRO CG C N N 302 PRO CD C N N 303 PRO OXT O N N 304 PRO H H N N 305 PRO HA H N N 306 PRO HB2 H N N 307 PRO HB3 H N N 308 PRO HG2 H N N 309 PRO HG3 H N N 310 PRO HD2 H N N 311 PRO HD3 H N N 312 PRO HXT H N N 313 SER N N N N 314 SER CA C N S 315 SER C C N N 316 SER O O N N 317 SER CB C N N 318 SER OG O N N 319 SER OXT O N N 320 SER H H N N 321 SER H2 H N N 322 SER HA H N N 323 SER HB2 H N N 324 SER HB3 H N N 325 SER HG H N N 326 SER HXT H N N 327 THR N N N N 328 THR CA C N S 329 THR C C N N 330 THR O O N N 331 THR CB C N R 332 THR OG1 O N N 333 THR CG2 C N N 334 THR OXT O N N 335 THR H H N N 336 THR H2 H N N 337 THR HA H N N 338 THR HB H N N 339 THR HG1 H N N 340 THR HG21 H N N 341 THR HG22 H N N 342 THR HG23 H N N 343 THR HXT H N N 344 TRP N N N N 345 TRP CA C N S 346 TRP C C N N 347 TRP O O N N 348 TRP CB C N N 349 TRP CG C Y N 350 TRP CD1 C Y N 351 TRP CD2 C Y N 352 TRP NE1 N Y N 353 TRP CE2 C Y N 354 TRP CE3 C Y N 355 TRP CZ2 C Y N 356 TRP CZ3 C Y N 357 TRP CH2 C Y N 358 TRP OXT O N N 359 TRP H H N N 360 TRP H2 H N N 361 TRP HA H N N 362 TRP HB2 H N N 363 TRP HB3 H N N 364 TRP HD1 H N N 365 TRP HE1 H N N 366 TRP HE3 H N N 367 TRP HZ2 H N N 368 TRP HZ3 H N N 369 TRP HH2 H N N 370 TRP HXT H N N 371 TYR N N N N 372 TYR CA C N S 373 TYR C C N N 374 TYR O O N N 375 TYR CB C N N 376 TYR CG C Y N 377 TYR CD1 C Y N 378 TYR CD2 C Y N 379 TYR CE1 C Y N 380 TYR CE2 C Y N 381 TYR CZ C Y N 382 TYR OH O N N 383 TYR OXT O N N 384 TYR H H N N 385 TYR H2 H N N 386 TYR HA H N N 387 TYR HB2 H N N 388 TYR HB3 H N N 389 TYR HD1 H N N 390 TYR HD2 H N N 391 TYR HE1 H N N 392 TYR HE2 H N N 393 TYR HH H N N 394 TYR HXT H N N 395 VAL N N N N 396 VAL CA C N S 397 VAL C C N N 398 VAL O O N N 399 VAL CB C N N 400 VAL CG1 C N N 401 VAL CG2 C N N 402 VAL OXT O N N 403 VAL H H N N 404 VAL H2 H N N 405 VAL HA H N N 406 VAL HB H N N 407 VAL HG11 H N N 408 VAL HG12 H N N 409 VAL HG13 H N N 410 VAL HG21 H N N 411 VAL HG22 H N N 412 VAL HG23 H N N 413 VAL HXT H N N 414 YF6 C1 C Y N 415 YF6 C2 C Y N 416 YF6 C3 C Y N 417 YF6 C4 C Y N 418 YF6 C5 C Y N 419 YF6 C6 C Y N 420 YF6 C7 C N N 421 YF6 C8 C N N 422 YF6 C9 C N N 423 YF6 C10 C N N 424 YF6 N1 N N N 425 YF6 C11 C N N 426 YF6 N2 N N N 427 YF6 C12 C N N 428 YF6 C13 C N N 429 YF6 C14 C N N 430 YF6 N3 N N N 431 YF6 C15 C N N 432 YF6 C16 C N N 433 YF6 C17 C N N 434 YF6 O1 O N N 435 YF6 C18 C Y N 436 YF6 C19 C Y N 437 YF6 N4 N Y N 438 YF6 N5 N N N 439 YF6 S1 S N N 440 YF6 C20 C N N 441 YF6 C21 C N N 442 YF6 O2 O N N 443 YF6 O3 O N N 444 YF6 C22 C N N 445 YF6 C23 C N N 446 YF6 C24 C Y N 447 YF6 C25 C Y N 448 YF6 N6 N Y N 449 YF6 C26 C Y N 450 YF6 C27 C Y N 451 YF6 C28 C Y N 452 YF6 C29 C Y N 453 YF6 C30 C Y N 454 YF6 C31 C Y N 455 YF6 C32 C Y N 456 YF6 C33 C Y N 457 YF6 N7 N Y N 458 YF6 H1 H N N 459 YF6 H2 H N N 460 YF6 H3 H N N 461 YF6 H4 H N N 462 YF6 H5 H N N 463 YF6 H6 H N N 464 YF6 H7 H N N 465 YF6 H8 H N N 466 YF6 H9 H N N 467 YF6 H10 H N N 468 YF6 H11 H N N 469 YF6 H13 H N N 470 YF6 H14 H N N 471 YF6 H15 H N N 472 YF6 H16 H N N 473 YF6 H17 H N N 474 YF6 H18 H N N 475 YF6 H19 H N N 476 YF6 H20 H N N 477 YF6 H21 H N N 478 YF6 H22 H N N 479 YF6 H23 H N N 480 YF6 H24 H N N 481 YF6 H25 H N N 482 YF6 H26 H N N 483 YF6 H27 H N N 484 YF6 H28 H N N 485 YF6 H29 H N N 486 YF6 H30 H N N 487 YF6 H31 H N N 488 YF6 H32 H N N 489 YF6 H33 H N N 490 YF6 H34 H N N 491 YF6 H35 H N N 492 YF6 H36 H N N 493 YF6 H37 H N N 494 YF6 H38 H N N 495 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 GOL C1 O1 sing N N 138 GOL C1 C2 sing N N 139 GOL C1 H11 sing N N 140 GOL C1 H12 sing N N 141 GOL O1 HO1 sing N N 142 GOL C2 O2 sing N N 143 GOL C2 C3 sing N N 144 GOL C2 H2 sing N N 145 GOL O2 HO2 sing N N 146 GOL C3 O3 sing N N 147 GOL C3 H31 sing N N 148 GOL C3 H32 sing N N 149 GOL O3 HO3 sing N N 150 HIS N CA sing N N 151 HIS N H sing N N 152 HIS N H2 sing N N 153 HIS CA C sing N N 154 HIS CA CB sing N N 155 HIS CA HA sing N N 156 HIS C O doub N N 157 HIS C OXT sing N N 158 HIS CB CG sing N N 159 HIS CB HB2 sing N N 160 HIS CB HB3 sing N N 161 HIS CG ND1 sing Y N 162 HIS CG CD2 doub Y N 163 HIS ND1 CE1 doub Y N 164 HIS ND1 HD1 sing N N 165 HIS CD2 NE2 sing Y N 166 HIS CD2 HD2 sing N N 167 HIS CE1 NE2 sing Y N 168 HIS CE1 HE1 sing N N 169 HIS NE2 HE2 sing N N 170 HIS OXT HXT sing N N 171 HOH O H1 sing N N 172 HOH O H2 sing N N 173 ILE N CA sing N N 174 ILE N H sing N N 175 ILE N H2 sing N N 176 ILE CA C sing N N 177 ILE CA CB sing N N 178 ILE CA HA sing N N 179 ILE C O doub N N 180 ILE C OXT sing N N 181 ILE CB CG1 sing N N 182 ILE CB CG2 sing N N 183 ILE CB HB sing N N 184 ILE CG1 CD1 sing N N 185 ILE CG1 HG12 sing N N 186 ILE CG1 HG13 sing N N 187 ILE CG2 HG21 sing N N 188 ILE CG2 HG22 sing N N 189 ILE CG2 HG23 sing N N 190 ILE CD1 HD11 sing N N 191 ILE CD1 HD12 sing N N 192 ILE CD1 HD13 sing N N 193 ILE OXT HXT sing N N 194 LEU N CA sing N N 195 LEU N H sing N N 196 LEU N H2 sing N N 197 LEU CA C sing N N 198 LEU CA CB sing N N 199 LEU CA HA sing N N 200 LEU C O doub N N 201 LEU C OXT sing N N 202 LEU CB CG sing N N 203 LEU CB HB2 sing N N 204 LEU CB HB3 sing N N 205 LEU CG CD1 sing N N 206 LEU CG CD2 sing N N 207 LEU CG HG sing N N 208 LEU CD1 HD11 sing N N 209 LEU CD1 HD12 sing N N 210 LEU CD1 HD13 sing N N 211 LEU CD2 HD21 sing N N 212 LEU CD2 HD22 sing N N 213 LEU CD2 HD23 sing N N 214 LEU OXT HXT sing N N 215 LYS N CA sing N N 216 LYS N H sing N N 217 LYS N H2 sing N N 218 LYS CA C sing N N 219 LYS CA CB sing N N 220 LYS CA HA sing N N 221 LYS C O doub N N 222 LYS C OXT sing N N 223 LYS CB CG sing N N 224 LYS CB HB2 sing N N 225 LYS CB HB3 sing N N 226 LYS CG CD sing N N 227 LYS CG HG2 sing N N 228 LYS CG HG3 sing N N 229 LYS CD CE sing N N 230 LYS CD HD2 sing N N 231 LYS CD HD3 sing N N 232 LYS CE NZ sing N N 233 LYS CE HE2 sing N N 234 LYS CE HE3 sing N N 235 LYS NZ HZ1 sing N N 236 LYS NZ HZ2 sing N N 237 LYS NZ HZ3 sing N N 238 LYS OXT HXT sing N N 239 MET N CA sing N N 240 MET N H sing N N 241 MET N H2 sing N N 242 MET CA C sing N N 243 MET CA CB sing N N 244 MET CA HA sing N N 245 MET C O doub N N 246 MET C OXT sing N N 247 MET CB CG sing N N 248 MET CB HB2 sing N N 249 MET CB HB3 sing N N 250 MET CG SD sing N N 251 MET CG HG2 sing N N 252 MET CG HG3 sing N N 253 MET SD CE sing N N 254 MET CE HE1 sing N N 255 MET CE HE2 sing N N 256 MET CE HE3 sing N N 257 MET OXT HXT sing N N 258 PHE N CA sing N N 259 PHE N H sing N N 260 PHE N H2 sing N N 261 PHE CA C sing N N 262 PHE CA CB sing N N 263 PHE CA HA sing N N 264 PHE C O doub N N 265 PHE C OXT sing N N 266 PHE CB CG sing N N 267 PHE CB HB2 sing N N 268 PHE CB HB3 sing N N 269 PHE CG CD1 doub Y N 270 PHE CG CD2 sing Y N 271 PHE CD1 CE1 sing Y N 272 PHE CD1 HD1 sing N N 273 PHE CD2 CE2 doub Y N 274 PHE CD2 HD2 sing N N 275 PHE CE1 CZ doub Y N 276 PHE CE1 HE1 sing N N 277 PHE CE2 CZ sing Y N 278 PHE CE2 HE2 sing N N 279 PHE CZ HZ sing N N 280 PHE OXT HXT sing N N 281 PRO N CA sing N N 282 PRO N CD sing N N 283 PRO N H sing N N 284 PRO CA C sing N N 285 PRO CA CB sing N N 286 PRO CA HA sing N N 287 PRO C O doub N N 288 PRO C OXT sing N N 289 PRO CB CG sing N N 290 PRO CB HB2 sing N N 291 PRO CB HB3 sing N N 292 PRO CG CD sing N N 293 PRO CG HG2 sing N N 294 PRO CG HG3 sing N N 295 PRO CD HD2 sing N N 296 PRO CD HD3 sing N N 297 PRO OXT HXT sing N N 298 SER N CA sing N N 299 SER N H sing N N 300 SER N H2 sing N N 301 SER CA C sing N N 302 SER CA CB sing N N 303 SER CA HA sing N N 304 SER C O doub N N 305 SER C OXT sing N N 306 SER CB OG sing N N 307 SER CB HB2 sing N N 308 SER CB HB3 sing N N 309 SER OG HG sing N N 310 SER OXT HXT sing N N 311 THR N CA sing N N 312 THR N H sing N N 313 THR N H2 sing N N 314 THR CA C sing N N 315 THR CA CB sing N N 316 THR CA HA sing N N 317 THR C O doub N N 318 THR C OXT sing N N 319 THR CB OG1 sing N N 320 THR CB CG2 sing N N 321 THR CB HB sing N N 322 THR OG1 HG1 sing N N 323 THR CG2 HG21 sing N N 324 THR CG2 HG22 sing N N 325 THR CG2 HG23 sing N N 326 THR OXT HXT sing N N 327 TRP N CA sing N N 328 TRP N H sing N N 329 TRP N H2 sing N N 330 TRP CA C sing N N 331 TRP CA CB sing N N 332 TRP CA HA sing N N 333 TRP C O doub N N 334 TRP C OXT sing N N 335 TRP CB CG sing N N 336 TRP CB HB2 sing N N 337 TRP CB HB3 sing N N 338 TRP CG CD1 doub Y N 339 TRP CG CD2 sing Y N 340 TRP CD1 NE1 sing Y N 341 TRP CD1 HD1 sing N N 342 TRP CD2 CE2 doub Y N 343 TRP CD2 CE3 sing Y N 344 TRP NE1 CE2 sing Y N 345 TRP NE1 HE1 sing N N 346 TRP CE2 CZ2 sing Y N 347 TRP CE3 CZ3 doub Y N 348 TRP CE3 HE3 sing N N 349 TRP CZ2 CH2 doub Y N 350 TRP CZ2 HZ2 sing N N 351 TRP CZ3 CH2 sing Y N 352 TRP CZ3 HZ3 sing N N 353 TRP CH2 HH2 sing N N 354 TRP OXT HXT sing N N 355 TYR N CA sing N N 356 TYR N H sing N N 357 TYR N H2 sing N N 358 TYR CA C sing N N 359 TYR CA CB sing N N 360 TYR CA HA sing N N 361 TYR C O doub N N 362 TYR C OXT sing N N 363 TYR CB CG sing N N 364 TYR CB HB2 sing N N 365 TYR CB HB3 sing N N 366 TYR CG CD1 doub Y N 367 TYR CG CD2 sing Y N 368 TYR CD1 CE1 sing Y N 369 TYR CD1 HD1 sing N N 370 TYR CD2 CE2 doub Y N 371 TYR CD2 HD2 sing N N 372 TYR CE1 CZ doub Y N 373 TYR CE1 HE1 sing N N 374 TYR CE2 CZ sing Y N 375 TYR CE2 HE2 sing N N 376 TYR CZ OH sing N N 377 TYR OH HH sing N N 378 TYR OXT HXT sing N N 379 VAL N CA sing N N 380 VAL N H sing N N 381 VAL N H2 sing N N 382 VAL CA C sing N N 383 VAL CA CB sing N N 384 VAL CA HA sing N N 385 VAL C O doub N N 386 VAL C OXT sing N N 387 VAL CB CG1 sing N N 388 VAL CB CG2 sing N N 389 VAL CB HB sing N N 390 VAL CG1 HG11 sing N N 391 VAL CG1 HG12 sing N N 392 VAL CG1 HG13 sing N N 393 VAL CG2 HG21 sing N N 394 VAL CG2 HG22 sing N N 395 VAL CG2 HG23 sing N N 396 VAL OXT HXT sing N N 397 YF6 N3 C15 sing N N 398 YF6 N3 C14 sing N N 399 YF6 C31 C30 doub Y N 400 YF6 C31 C32 sing Y N 401 YF6 C15 C16 sing N N 402 YF6 C14 C13 sing N N 403 YF6 C30 C25 sing Y N 404 YF6 C28 C29 doub Y N 405 YF6 C28 C27 sing Y N 406 YF6 C32 C33 doub Y N 407 YF6 C29 C24 sing Y N 408 YF6 C27 C26 doub Y N 409 YF6 C16 C12 sing N N 410 YF6 C13 C12 sing N N 411 YF6 C23 C22 sing N N 412 YF6 C25 C22 sing N N 413 YF6 C25 N7 doub Y N 414 YF6 C24 C22 sing N N 415 YF6 C24 N6 doub Y N 416 YF6 C33 N7 sing Y N 417 YF6 C12 N2 sing N N 418 YF6 C26 N6 sing Y N 419 YF6 C22 N4 sing N N 420 YF6 N2 C9 sing N N 421 YF6 N4 C19 sing Y N 422 YF6 N4 C4 sing Y N 423 YF6 C9 C8 doub N N 424 YF6 C9 C10 sing N N 425 YF6 C8 C7 sing N N 426 YF6 C19 C18 doub Y N 427 YF6 C5 C4 doub Y N 428 YF6 C5 C6 sing Y N 429 YF6 C4 C3 sing Y N 430 YF6 O1 C10 doub N N 431 YF6 C10 N1 sing N N 432 YF6 C7 C6 sing N N 433 YF6 C7 C11 doub N N 434 YF6 C6 C1 doub Y N 435 YF6 C18 C3 sing Y N 436 YF6 C3 C2 doub Y N 437 YF6 N1 C11 sing N N 438 YF6 N1 C17 sing N N 439 YF6 C1 C2 sing Y N 440 YF6 C2 N5 sing N N 441 YF6 N5 S1 sing N N 442 YF6 O2 S1 doub N N 443 YF6 S1 C20 sing N N 444 YF6 S1 O3 doub N N 445 YF6 C20 C21 sing N N 446 YF6 C1 H1 sing N N 447 YF6 C5 H2 sing N N 448 YF6 C8 H3 sing N N 449 YF6 C11 H4 sing N N 450 YF6 N2 H5 sing N N 451 YF6 C12 H6 sing N N 452 YF6 C13 H7 sing N N 453 YF6 C13 H8 sing N N 454 YF6 C14 H9 sing N N 455 YF6 C14 H10 sing N N 456 YF6 N3 H11 sing N N 457 YF6 C15 H13 sing N N 458 YF6 C15 H14 sing N N 459 YF6 C16 H15 sing N N 460 YF6 C16 H16 sing N N 461 YF6 C17 H17 sing N N 462 YF6 C17 H18 sing N N 463 YF6 C17 H19 sing N N 464 YF6 C18 H20 sing N N 465 YF6 C19 H21 sing N N 466 YF6 N5 H22 sing N N 467 YF6 C20 H23 sing N N 468 YF6 C20 H24 sing N N 469 YF6 C21 H25 sing N N 470 YF6 C21 H26 sing N N 471 YF6 C21 H27 sing N N 472 YF6 C23 H28 sing N N 473 YF6 C23 H29 sing N N 474 YF6 C23 H30 sing N N 475 YF6 C26 H31 sing N N 476 YF6 C27 H32 sing N N 477 YF6 C28 H33 sing N N 478 YF6 C29 H34 sing N N 479 YF6 C30 H35 sing N N 480 YF6 C31 H36 sing N N 481 YF6 C32 H37 sing N N 482 YF6 C33 H38 sing N N 483 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Center for Research Resources (NIH/NCRR)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number UL1RR029879 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id YF6 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id YF6 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;N-(1-[1,1-di(pyridin-2-yl)ethyl]-6-{1-methyl-6-oxo-5-[(piperidin-4-yl)amino]-1,6-dihydropyridin-3-yl}-1H-indol-4-yl)ethanesulfonamide ; YF6 3 1,2-ETHANEDIOL EDO 4 GLYCEROL GOL 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2OUO _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support homology _pdbx_struct_assembly_auth_evidence.details ? #