HEADER METAL BINDING PROTEIN 31-JUL-20 7JMA TITLE CRYSTAL STRUCTURE OF THE APO FORM OF NITROGENASE IRON-MOLYBDENUM TITLE 2 COFACTOR BIOSYNTHESIS ENZYME NIFB FROM METHANOTHERMOBACTER TITLE 3 THERMAUTOTROPHICUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: NITROGENASE IRON-MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN COMPND 3 NIFB; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOTHERMOBACTER THERMAUTOTROPHICUS; SOURCE 3 ORGANISM_TAXID: 145262; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NITROGENASE, RADICAL SAM ENZYME, IRON-MOLYBDENUM COFACTOR KEYWDS 2 BIOSYNTHESIS, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR W.KANG,Y.HU,M.W.RIBBE REVDAT 5 18-OCT-23 7JMA 1 REMARK REVDAT 4 03-FEB-21 7JMA 1 JRNL REVDAT 3 20-JAN-21 7JMA 1 REMARK REVDAT 2 09-DEC-20 7JMA 1 JRNL REVDAT 1 28-OCT-20 7JMA 0 JRNL AUTH W.KANG,L.A.RETTBERG,M.T.STIEBRITZ,A.J.JASNIEWSKI,K.TANIFUJI, JRNL AUTH 2 C.C.LEE,M.W.RIBBE,Y.HU JRNL TITL X-RAY CRYSTALLOGRAPHIC ANALYSIS OF NIFB WITH A FULL JRNL TITL 2 COMPLEMENT OF CLUSTERS: STRUCTURAL INSIGHTS INTO THE RADICAL JRNL TITL 3 SAM-DEPENDENT CARBIDE INSERTION DURING NITROGENASE COFACTOR JRNL TITL 4 ASSEMBLY. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 60 2364 2021 JRNL REFN ESSN 1521-3773 JRNL PMID 33035363 JRNL DOI 10.1002/ANIE.202011367 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.10 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 27616 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1377 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.1000 - 3.6600 1.00 2854 142 0.1713 0.1838 REMARK 3 2 3.6600 - 2.9100 1.00 2682 139 0.1807 0.2232 REMARK 3 3 2.9100 - 2.5400 1.00 2615 153 0.1879 0.2130 REMARK 3 4 2.5400 - 2.3100 1.00 2631 134 0.1997 0.2287 REMARK 3 5 2.3100 - 2.1400 1.00 2589 144 0.2017 0.2150 REMARK 3 6 2.1400 - 2.0200 1.00 2603 135 0.2007 0.2127 REMARK 3 7 2.0200 - 1.9100 1.00 2580 148 0.2050 0.2589 REMARK 3 8 1.9100 - 1.8300 0.99 2579 116 0.2547 0.2877 REMARK 3 9 1.8300 - 1.7600 0.99 2582 124 0.2820 0.3336 REMARK 3 10 1.7600 - 1.7000 0.99 2524 142 0.2956 0.3185 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.193 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.868 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.41 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1621 REMARK 3 ANGLE : 0.841 2206 REMARK 3 CHIRALITY : 0.058 266 REMARK 3 PLANARITY : 0.005 287 REMARK 3 DIHEDRAL : 6.419 990 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 31 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.7784 40.1989 57.2275 REMARK 3 T TENSOR REMARK 3 T11: 0.1696 T22: 0.4046 REMARK 3 T33: 0.2457 T12: 0.0281 REMARK 3 T13: -0.0354 T23: 0.0477 REMARK 3 L TENSOR REMARK 3 L11: 3.8137 L22: 3.9707 REMARK 3 L33: 4.1297 L12: 1.1837 REMARK 3 L13: 1.0488 L23: 2.1709 REMARK 3 S TENSOR REMARK 3 S11: 0.0513 S12: -0.1959 S13: -0.4758 REMARK 3 S21: 0.1839 S22: 0.2295 S23: 0.0723 REMARK 3 S31: 0.1475 S32: -0.1240 S33: -0.2969 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 65 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6023 28.2731 55.9890 REMARK 3 T TENSOR REMARK 3 T11: 0.3110 T22: 0.3397 REMARK 3 T33: 0.5484 T12: -0.0011 REMARK 3 T13: -0.1030 T23: 0.0817 REMARK 3 L TENSOR REMARK 3 L11: 4.4729 L22: 4.0632 REMARK 3 L33: 3.9386 L12: 1.3679 REMARK 3 L13: -0.3812 L23: -1.7952 REMARK 3 S TENSOR REMARK 3 S11: 0.2088 S12: -0.0157 S13: -1.0859 REMARK 3 S21: 0.0161 S22: 0.2635 S23: 0.3084 REMARK 3 S31: 0.5968 S32: -0.2366 S33: -0.3100 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 109 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.8408 30.9513 57.2160 REMARK 3 T TENSOR REMARK 3 T11: 0.3269 T22: 0.5009 REMARK 3 T33: 0.5845 T12: -0.0690 REMARK 3 T13: -0.0742 T23: 0.1686 REMARK 3 L TENSOR REMARK 3 L11: 6.0119 L22: 4.8052 REMARK 3 L33: 6.5734 L12: 0.4802 REMARK 3 L13: 1.0170 L23: 2.8892 REMARK 3 S TENSOR REMARK 3 S11: 0.1193 S12: -0.2509 S13: -1.1072 REMARK 3 S21: 0.5640 S22: 0.3896 S23: 0.7782 REMARK 3 S31: 0.7925 S32: -0.6789 S33: -0.6399 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 119 THROUGH 132 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4200 42.4377 47.7441 REMARK 3 T TENSOR REMARK 3 T11: 0.2690 T22: 0.4285 REMARK 3 T33: 0.3126 T12: 0.0284 REMARK 3 T13: -0.0278 T23: -0.0216 REMARK 3 L TENSOR REMARK 3 L11: 5.8195 L22: 5.8001 REMARK 3 L33: 6.5051 L12: 5.7662 REMARK 3 L13: 0.9885 L23: 1.3269 REMARK 3 S TENSOR REMARK 3 S11: -0.2846 S12: 0.8673 S13: -0.3530 REMARK 3 S21: -0.8292 S22: 0.2286 S23: -0.0004 REMARK 3 S31: -0.0519 S32: -0.1422 S33: 0.0450 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 133 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.8676 51.4270 55.9607 REMARK 3 T TENSOR REMARK 3 T11: 0.2058 T22: 0.3590 REMARK 3 T33: 0.2207 T12: 0.0252 REMARK 3 T13: -0.0257 T23: -0.0186 REMARK 3 L TENSOR REMARK 3 L11: 5.9426 L22: 3.3587 REMARK 3 L33: 2.3958 L12: 1.6370 REMARK 3 L13: 0.0375 L23: 0.4679 REMARK 3 S TENSOR REMARK 3 S11: 0.1077 S12: -0.3115 S13: 0.5075 REMARK 3 S21: 0.0303 S22: -0.0164 S23: 0.0341 REMARK 3 S31: -0.2558 S32: 0.0230 S33: -0.0971 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 162 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0328 53.5212 50.8160 REMARK 3 T TENSOR REMARK 3 T11: 0.2308 T22: 0.3482 REMARK 3 T33: 0.2260 T12: 0.0213 REMARK 3 T13: -0.0072 T23: 0.0684 REMARK 3 L TENSOR REMARK 3 L11: 4.1576 L22: 4.4015 REMARK 3 L33: 1.7534 L12: 3.0769 REMARK 3 L13: -0.8074 L23: 0.1203 REMARK 3 S TENSOR REMARK 3 S11: -0.0949 S12: 0.1524 S13: 0.7755 REMARK 3 S21: -0.2117 S22: 0.1798 S23: 0.3728 REMARK 3 S31: -0.1723 S32: -0.0894 S33: -0.0397 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 188 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.0638 54.0752 64.2036 REMARK 3 T TENSOR REMARK 3 T11: 0.2373 T22: 0.4689 REMARK 3 T33: 0.2606 T12: 0.0306 REMARK 3 T13: 0.0206 T23: -0.1193 REMARK 3 L TENSOR REMARK 3 L11: 5.8457 L22: 2.8947 REMARK 3 L33: 5.0203 L12: 1.6748 REMARK 3 L13: 3.1267 L23: 1.8228 REMARK 3 S TENSOR REMARK 3 S11: -0.0600 S12: -0.8551 S13: 0.7959 REMARK 3 S21: 0.2594 S22: 0.0033 S23: 0.1310 REMARK 3 S31: -0.3220 S32: -0.2198 S33: 0.1294 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 217 THROUGH 225 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.2857 47.7750 67.0082 REMARK 3 T TENSOR REMARK 3 T11: 0.3191 T22: 0.6286 REMARK 3 T33: 0.1486 T12: -0.0531 REMARK 3 T13: -0.0219 T23: -0.0601 REMARK 3 L TENSOR REMARK 3 L11: 5.4172 L22: 1.9711 REMARK 3 L33: 4.2197 L12: 0.8193 REMARK 3 L13: 4.7686 L23: 0.6543 REMARK 3 S TENSOR REMARK 3 S11: 0.0967 S12: -0.7338 S13: -0.0292 REMARK 3 S21: 0.5631 S22: 0.0072 S23: 0.1769 REMARK 3 S31: -0.1282 S32: -0.1083 S33: 0.4109 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 226 THROUGH 239 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.3441 53.6235 72.6849 REMARK 3 T TENSOR REMARK 3 T11: 0.4228 T22: 1.1603 REMARK 3 T33: 0.0309 T12: -0.0134 REMARK 3 T13: -0.0859 T23: -0.3590 REMARK 3 L TENSOR REMARK 3 L11: 0.6831 L22: 2.9054 REMARK 3 L33: 8.3052 L12: -0.4319 REMARK 3 L13: 0.7866 L23: 1.6949 REMARK 3 S TENSOR REMARK 3 S11: 0.2111 S12: -0.1700 S13: 0.1226 REMARK 3 S21: -0.1482 S22: -0.2601 S23: -0.1110 REMARK 3 S31: -0.4970 S32: 0.7669 S33: -0.2680 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 240 THROUGH 257 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.2636 52.0418 74.2221 REMARK 3 T TENSOR REMARK 3 T11: 0.3673 T22: 1.0154 REMARK 3 T33: 0.3673 T12: -0.0635 REMARK 3 T13: 0.1332 T23: -0.0875 REMARK 3 L TENSOR REMARK 3 L11: 3.0630 L22: 2.9512 REMARK 3 L33: 5.8891 L12: 0.5845 REMARK 3 L13: 3.2548 L23: 2.3944 REMARK 3 S TENSOR REMARK 3 S11: 0.3307 S12: -1.6163 S13: 0.2178 REMARK 3 S21: 0.8974 S22: -0.0601 S23: -0.0373 REMARK 3 S31: -0.0120 S32: 0.3635 S33: -0.3003 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7JMA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-AUG-20. REMARK 100 THE DEPOSITION ID IS D_1000251053. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-DEC-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : LIQUID NITROGEN-COOLED DOUBLE REMARK 200 CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27742 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 53.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 18.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 18.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6Y1X REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 31.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MIB (PH5) 25 % W/V PEG 1500, PH REMARK 280 5.0, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.75950 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.94500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.94500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 35.87975 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.94500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.94500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 107.63925 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.94500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.94500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 35.87975 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.94500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.94500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 107.63925 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 71.75950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 ASP A 3 REMARK 465 GLN A 4 REMARK 465 ARG A 5 REMARK 465 GLN A 6 REMARK 465 THR A 7 REMARK 465 ARG A 8 REMARK 465 PHE A 9 REMARK 465 ALA A 10 REMARK 465 HIS A 11 REMARK 465 ILE A 12 REMARK 465 THR A 13 REMARK 465 LYS A 14 REMARK 465 ALA A 15 REMARK 465 HIS A 16 REMARK 465 PRO A 17 REMARK 465 CYS A 18 REMARK 465 PHE A 19 REMARK 465 ASN A 20 REMARK 465 GLU A 21 REMARK 465 LYS A 22 REMARK 465 LEU A 23 REMARK 465 HIS A 24 REMARK 465 ASP A 25 REMARK 465 ARG A 26 REMARK 465 VAL A 27 REMARK 465 CYS A 45 REMARK 465 THR A 46 REMARK 465 ARG A 47 REMARK 465 ASP A 48 REMARK 465 ILE A 49 REMARK 465 ASN A 50 REMARK 465 GLU A 51 REMARK 465 CYS A 52 REMARK 465 GLU A 53 REMARK 465 ARG A 54 REMARK 465 ARG A 55 REMARK 465 PRO A 56 REMARK 465 GLY A 57 REMARK 465 VAL A 58 REMARK 465 THR A 59 REMARK 465 GLY A 60 REMARK 465 ARG A 61 REMARK 465 ALA A 259 REMARK 465 CYS A 260 REMARK 465 THR A 261 REMARK 465 GLN A 262 REMARK 465 CYS A 263 REMARK 465 ARG A 264 REMARK 465 ALA A 265 REMARK 465 ASP A 266 REMARK 465 ALA A 267 REMARK 465 TYR A 268 REMARK 465 GLY A 269 REMARK 465 ILE A 270 REMARK 465 PRO A 271 REMARK 465 GLY A 272 REMARK 465 LYS A 273 REMARK 465 LYS A 274 REMARK 465 GLU A 275 REMARK 465 ALA A 276 REMARK 465 ASP A 277 REMARK 465 LYS A 278 REMARK 465 HIS A 279 REMARK 465 LEU A 280 REMARK 465 ASP A 281 REMARK 465 MET A 282 REMARK 465 THR A 283 REMARK 465 PRO A 284 REMARK 465 ALA A 285 REMARK 465 SER A 286 REMARK 465 HIS A 287 REMARK 465 TYR A 288 REMARK 465 LEU A 289 REMARK 465 GLU A 290 REMARK 465 HIS A 291 REMARK 465 HIS A 292 REMARK 465 HIS A 293 REMARK 465 HIS A 294 REMARK 465 HIS A 295 REMARK 465 HIS A 296 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 29 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 67 CG OD1 OD2 REMARK 470 LYS A 70 CG CD CE NZ REMARK 470 GLU A 73 CG CD OE1 OE2 REMARK 470 LYS A 74 CG CD CE NZ REMARK 470 LYS A 76 CG CD CE NZ REMARK 470 GLU A 77 CG CD OE1 OE2 REMARK 470 GLU A 78 CG CD OE1 OE2 REMARK 470 GLU A 96 CG CD OE1 OE2 REMARK 470 GLU A 97 CG CD OE1 OE2 REMARK 470 GLU A 100 CG CD OE1 OE2 REMARK 470 LYS A 107 CG CD CE NZ REMARK 470 LYS A 108 CG CD CE NZ REMARK 470 LYS A 152 CE NZ REMARK 470 GLU A 179 CG CD OE1 OE2 REMARK 470 MET A 229 CG SD CE REMARK 470 MET A 232 CG SD CE REMARK 470 LYS A 233 CG CD CE NZ REMARK 470 ARG A 237 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 241 CG CD OE1 OE2 REMARK 470 ARG A 245 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 252 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 201 -56.86 -128.10 REMARK 500 REMARK 500 REMARK: NULL DBREF 7JMA A 1 288 UNP O27899 O27899_METTH 1 288 SEQADV 7JMA LEU A 289 UNP O27899 EXPRESSION TAG SEQADV 7JMA GLU A 290 UNP O27899 EXPRESSION TAG SEQADV 7JMA HIS A 291 UNP O27899 EXPRESSION TAG SEQADV 7JMA HIS A 292 UNP O27899 EXPRESSION TAG SEQADV 7JMA HIS A 293 UNP O27899 EXPRESSION TAG SEQADV 7JMA HIS A 294 UNP O27899 EXPRESSION TAG SEQADV 7JMA HIS A 295 UNP O27899 EXPRESSION TAG SEQADV 7JMA HIS A 296 UNP O27899 EXPRESSION TAG SEQRES 1 A 296 MET PRO ASP GLN ARG GLN THR ARG PHE ALA HIS ILE THR SEQRES 2 A 296 LYS ALA HIS PRO CYS PHE ASN GLU LYS LEU HIS ASP ARG SEQRES 3 A 296 VAL GLY ARG VAL HIS VAL PRO ILE ALA PRO ARG CYS ASN SEQRES 4 A 296 ILE HIS CYS LYS PHE CYS THR ARG ASP ILE ASN GLU CYS SEQRES 5 A 296 GLU ARG ARG PRO GLY VAL THR GLY ARG LEU MET THR ALA SEQRES 6 A 296 ASP ASP ALA ILE LYS HIS VAL GLU LYS VAL LYS GLU GLU SEQRES 7 A 296 MET PRO ILE SER VAL ILE GLY VAL ALA GLY PRO GLY ASP SEQRES 8 A 296 ALA LEU ALA ASN GLU GLU THR PHE GLU PHE PHE LYS LYS SEQRES 9 A 296 ALA SER LYS LYS PHE PRO ASP LEU LEU LYS CYS MET SER SEQRES 10 A 296 THR ASN GLY LEU LEU LEU PRO ASP ARG ALA ASP GLU LEU SEQRES 11 A 296 ALA GLU LEU GLY ILE ASN THR VAL THR VAL THR VAL ASN SEQRES 12 A 296 ALA VAL ASP PRO GLU ILE GLY GLU LYS ILE TYR SER PHE SEQRES 13 A 296 VAL VAL TYR LYS ASP LYS VAL TYR HIS GLY ARG GLU ALA SEQRES 14 A 296 PHE GLU VAL LEU SER ARG ASN GLN LEU GLU GLY ILE GLU SEQRES 15 A 296 LYS LEU ALA GLU ARG GLY ILE ILE VAL LYS VAL ASN SER SEQRES 16 A 296 VAL LEU ILE PRO GLY LEU ASN ASP GLU HIS ILE VAL ASP SEQRES 17 A 296 ILE ALA ARG GLU VAL LYS LYS ARG GLY ALA SER LEU MET SEQRES 18 A 296 ASN ILE ILE PRO LEU ILE PRO MET GLY GLU MET LYS ASP SEQRES 19 A 296 TYR PRO ARG PRO THR CYS GLU GLN ILE GLU ARG VAL ARG SEQRES 20 A 296 ASN GLU VAL GLU LYS ILE ILE PRO VAL PHE ARG ALA CYS SEQRES 21 A 296 THR GLN CYS ARG ALA ASP ALA TYR GLY ILE PRO GLY LYS SEQRES 22 A 296 LYS GLU ALA ASP LYS HIS LEU ASP MET THR PRO ALA SER SEQRES 23 A 296 HIS TYR LEU GLU HIS HIS HIS HIS HIS HIS FORMUL 2 HOH *73(H2 O) HELIX 1 AA1 THR A 64 GLU A 77 1 14 HELIX 2 AA2 ASP A 91 ALA A 94 5 4 HELIX 3 AA3 ASN A 95 PHE A 109 1 15 HELIX 4 AA4 LEU A 122 LEU A 133 1 12 HELIX 5 AA5 ASP A 146 GLU A 151 1 6 HELIX 6 AA6 GLY A 166 ARG A 187 1 22 HELIX 7 AA7 HIS A 205 GLY A 217 1 13 HELIX 8 AA8 THR A 239 LYS A 252 1 14 SHEET 1 AA1 6 ARG A 29 HIS A 31 0 SHEET 2 AA1 6 VAL A 83 VAL A 86 1 O GLY A 85 N VAL A 30 SHEET 3 AA1 6 LEU A 113 THR A 118 1 O LEU A 113 N ILE A 84 SHEET 4 AA1 6 THR A 137 THR A 141 1 O THR A 139 N THR A 118 SHEET 5 AA1 6 ILE A 190 LEU A 197 1 O LYS A 192 N VAL A 140 SHEET 6 AA1 6 LEU A 220 PRO A 225 1 O ILE A 224 N LEU A 197 SHEET 1 AA2 3 ILE A 40 CYS A 42 0 SHEET 2 AA2 3 TYR A 154 TYR A 159 -1 O PHE A 156 N HIS A 41 SHEET 3 AA2 3 LYS A 162 HIS A 165 -1 O TYR A 164 N VAL A 157 CISPEP 1 GLY A 88 PRO A 89 0 3.87 CRYST1 57.890 57.890 143.519 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017274 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017274 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006968 0.00000