data_7LTB # _entry.id 7LTB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7LTB pdb_00007ltb 10.2210/pdb7ltb/pdb WWPDB D_1000254897 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details Analog _pdbx_database_related.db_id 7LKC _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7LTB _pdbx_database_status.recvd_initial_deposition_date 2021-02-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Davis, K.M.' 1 0000-0002-4351-5341 'Jeffrey, P.D.' 2 0000-0002-0258-8907 'Seyedsayamdost, M.R.' 3 0000-0003-2707-4854 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'to be published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structural and Functional Analysis of Keratinicyclin Reveals Synergistic Antibiosis with Vancomycin against Clostridium difficile' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'McWhorter, K.L.' 1 ? primary 'Chioti, V.T.' 2 ? primary 'Xu, F.' 3 ? primary 'Jeffrey, P.D.' 4 ? primary 'Davis, K.M.' 5 ? primary 'Seyedsayamdost, M.R.' 6 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7LTB _cell.details ? _cell.formula_units_Z ? _cell.length_a 24.316 _cell.length_a_esd ? _cell.length_b 29.667 _cell.length_b_esd ? _cell.length_c 32.209 _cell.length_c_esd ? _cell.volume 23235.017 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LTB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Keratinicyclin B peptide moiety' 1047.413 2 ? ? ? ? 2 branched nat '3-ammonio-2,3,6-trideoxy-alpha-L-arabino-hexopyranose-(1-2)-beta-D-glucopyranose' 310.321 2 ? ? ? ? 3 non-polymer nat alpha-D-mannopyranose 180.156 2 ? ? ? ? 4 non-polymer nat '(2~{S},4~{S},5~{R},6~{S})-4-azanyl-5-methoxy-6-methyl-oxan-2-ol' 161.199 2 ? ? ? ? 5 non-polymer syn 'FORMIC ACID' 46.025 1 ? ? ? ? 6 water nat water 18.015 41 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(HT0)F(GHP)(GHP)(OMY)(3FG)' _entity_poly.pdbx_seq_one_letter_code_can XFGGYX _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HT0 n 1 2 PHE n 1 3 GHP n 1 4 GHP n 1 5 OMY n 1 6 3FG n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 6 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Amycolatopsis keratiniphila' _entity_src_nat.pdbx_ncbi_taxonomy_id 129921 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7LTB _struct_ref.pdbx_db_accession 7LTB _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7LTB A 1 ? 6 ? 7LTB 2 ? 7 ? 2 7 2 1 7LTB B 1 ? 6 ? 7LTB 2 ? 7 ? 2 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 3FG 'L-peptide linking' . '(2S)-amino(3,5-dihydroxyphenyl)ethanoic acid' ? 'C8 H9 N O4' 183.161 BGC 'D-saccharide, beta linking' . beta-D-glucopyranose 'beta-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GHP 'D-peptide linking' . '(2R)-amino(4-hydroxyphenyl)ethanoic acid' ? 'C8 H9 N O3' 167.162 HOH non-polymer . WATER ? 'H2 O' 18.015 HT0 non-polymer . '(4R,5R)-5-(4-hydroxyphenyl)-2-oxo-1,3-oxazolidine-4-carboxylic acid' ? 'C10 H9 N O5' 223.182 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 OMY 'L-peptide linking' n '(betaR)-3-chloro-beta-hydroxy-L-tyrosine' ? 'C9 H10 Cl N O4' 231.633 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 YBJ non-polymer . '(2~{S},4~{S},5~{R},6~{S})-4-azanyl-5-methoxy-6-methyl-oxan-2-ol' L-actinosamine 'C7 H15 N O3' 161.199 Z6G saccharide . 3-ammonio-2,3,6-trideoxy-alpha-L-arabino-hexopyranose ? 'C6 H14 N O3 1' 148.180 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7LTB _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.77 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 55.64 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'Peptide was mixed in a 3:1 ratio with 0.1 M sodium acetate (pH 4.6) and 2 M sodium formate alone' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-07-20 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.652523 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 23-ID-B' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.652523 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 23-ID-B _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7LTB _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 0.890 _reflns.d_resolution_low 32.210 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 18474 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.700 _reflns.pdbx_Rmerge_I_obs 0.073 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.100 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects 4 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.076 _reflns.pdbx_Rpim_I_all 0.022 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 216032 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 0.890 0.900 ? ? 4279 ? ? ? 787 85.900 ? ? ? ? 1.482 ? ? ? ? ? ? ? ? 5.400 ? ? ? 0.800 1.638 0.667 ? 1 1 0.547 ? ? 4.860 32.210 ? ? 1486 ? ? ? 149 99.800 ? ? ? ? 0.039 ? ? ? ? ? ? ? ? 10.000 ? ? ? 41.500 0.041 0.012 ? 2 1 0.999 ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 11.38 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7LTB _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 0.95 _refine.ls_d_res_low 21.82 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 15216 _refine.ls_number_reflns_R_free 820 _refine.ls_number_reflns_R_work 14396 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.81 _refine.ls_percent_reflns_R_free 5.39 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1462 _refine.ls_R_factor_R_free 0.1509 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1458 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.33 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 7LKC _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 19.9702 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.0779 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 0.95 _refine_hist.d_res_low 21.82 _refine_hist.number_atoms_solvent 41 _refine_hist.number_atoms_total 276 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 232 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0126 ? 247 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 2.4779 ? 342 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.1111 ? 44 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0210 ? 26 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 16.4557 ? 70 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 0.95 1.01 . . 144 2358 99.80 . . . 0.2179 . 0.1824 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.01 1.09 . . 100 2369 99.68 . . . 0.1505 . 0.1372 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.09 1.20 . . 134 2368 99.72 . . . 0.1428 . 0.1186 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.20 1.37 . . 129 2385 99.80 . . . 0.1492 . 0.1310 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.37 1.73 . . 153 2401 99.88 . . . 0.1571 . 0.1504 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.73 21.82 . . 160 2515 99.96 . . . 0.1458 . 0.1504 . . . . . . . . . . . # _struct.entry_id 7LTB _struct.title 'Crystal Structure of Keratinicyclin B' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7LTB _struct_keywords.text 'Glycopeptide, Antibiotic, ACTINOMYCETE, BIOSYNTHESIS' _struct_keywords.pdbx_keywords ANTIBIOTIC # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 3 ? H N N 4 ? I N N 5 ? J N N 6 ? K N N 6 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A HT0 1 C ? ? ? 1_555 A PHE 2 N ? ? A HT0 2 A PHE 3 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale one ? A HT0 1 OH ? ? ? 1_555 A GHP 3 C3 ? ? A HT0 2 A GHP 4 1_555 ? ? ? ? ? ? ? 1.381 ? ? covale3 covale both ? A PHE 2 C ? ? ? 1_555 A GHP 3 N ? ? A PHE 3 A GHP 4 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale4 covale both ? A GHP 3 C ? ? ? 1_555 A GHP 4 N ? ? A GHP 4 A GHP 5 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale5 covale none ? A GHP 3 C5 ? ? ? 1_555 A OMY 5 OCZ ? ? A GHP 4 A OMY 6 1_555 ? ? ? ? ? ? ? 1.376 ? ? covale6 covale one ? A GHP 3 O4 ? ? ? 1_555 C BGC . C1 ? ? A GHP 4 F BGC 1 1_555 ? ? ? ? ? ? ? 1.375 sing ? covale7 covale both ? A GHP 4 C ? ? ? 1_555 A OMY 5 N ? ? A GHP 5 A OMY 6 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale8 covale one ? A GHP 4 C3 ? ? ? 1_555 A 3FG 6 CG1 ? ? A GHP 5 A 3FG 7 1_555 ? ? ? ? ? ? ? 1.495 ? ? covale9 covale both ? A OMY 5 C ? ? ? 1_555 A 3FG 6 N ? ? A OMY 6 A 3FG 7 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale10 covale one ? A OMY 5 ODE ? ? ? 1_555 F YBJ . C1 ? ? A OMY 6 A YBJ 102 1_555 ? ? ? ? ? ? ? 1.376 ? ? covale11 covale one ? A 3FG 6 OD1 ? ? ? 1_555 E MAN . C1 ? ? A 3FG 7 A MAN 101 1_555 ? ? ? ? ? ? ? 1.379 sing ? covale12 covale both ? B HT0 1 C ? ? ? 1_555 B PHE 2 N ? ? B HT0 2 B PHE 3 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale13 covale one ? B HT0 1 OH ? ? ? 1_555 B GHP 3 C3 ? ? B HT0 2 B GHP 4 1_555 ? ? ? ? ? ? ? 1.375 ? ? covale14 covale both ? B PHE 2 C ? ? ? 1_555 B GHP 3 N ? ? B PHE 3 B GHP 4 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale15 covale both ? B GHP 3 C ? ? ? 1_555 B GHP 4 N ? ? B GHP 4 B GHP 5 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale16 covale none ? B GHP 3 C5 ? ? ? 1_555 B OMY 5 OCZ ? ? B GHP 4 B OMY 6 1_555 ? ? ? ? ? ? ? 1.381 ? ? covale17 covale one ? B GHP 3 O4 ? ? ? 1_555 D BGC . C1 ? ? B GHP 4 J BGC 1 1_555 ? ? ? ? ? ? ? 1.379 sing ? covale18 covale both ? B GHP 4 C ? ? ? 1_555 B OMY 5 N ? ? B GHP 5 B OMY 6 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale19 covale one ? B GHP 4 C3 ? ? ? 1_555 B 3FG 6 CG1 ? ? B GHP 5 B 3FG 7 1_555 ? ? ? ? ? ? ? 1.492 ? ? covale20 covale both ? B OMY 5 C ? ? ? 1_555 B 3FG 6 N ? ? B OMY 6 B 3FG 7 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale21 covale one ? B OMY 5 ODE ? ? ? 1_555 H YBJ . C1 ? ? B OMY 6 B YBJ 102 1_555 ? ? ? ? ? ? ? 1.379 ? ? covale22 covale one ? B 3FG 6 OD1 ? ? ? 1_555 G MAN . C1 ? ? B 3FG 7 B MAN 101 1_555 ? ? ? ? ? ? ? 1.381 sing ? covale23 covale both ? C BGC . O2 ? ? ? 1_555 C Z6G . C1 ? ? F BGC 1 F Z6G 2 1_555 ? ? ? ? ? ? ? 1.373 ? ? covale24 covale both ? D BGC . O2 ? ? ? 1_555 D Z6G . C1 ? ? J BGC 1 J Z6G 2 1_555 ? ? ? ? ? ? ? 1.374 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GHP 4 A . ? GHP 5 A OMY 5 A ? OMY 6 A 1 9.67 2 GHP 4 B . ? GHP 5 B OMY 5 B ? OMY 6 B 1 9.55 # _atom_sites.entry_id 7LTB _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.041125 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.033707 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.031047 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 2.51340 1.74867 1.72398 ? 31.80534 0.44561 10.58317 ? 0.0 ;3-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? CL ? ? 9.50761 7.44341 ? ? 1.04373 23.83732 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.53795 0.34799 0.11320 ? 10.08003 29.74760 2.57510 ? 0.0 ;3-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 2.99955 2.25584 1.72788 ? 23.27268 7.45433 0.31622 ? 0.0 ;3-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O1- ? ? 4.31557 2.79156 1.86576 ? 8.03600 32.36470 0.29580 ? 0.0 ;3-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HT0 1 2 2 HT0 HT0 A . n A 1 2 PHE 2 3 3 PHE PHE A . n A 1 3 GHP 3 4 4 GHP GHP A . n A 1 4 GHP 4 5 5 GHP GHP A . n A 1 5 OMY 5 6 6 OMY OMY A . n A 1 6 3FG 6 7 7 3FG 3FG A . n B 1 1 HT0 1 2 2 HT0 HT0 B . n B 1 2 PHE 2 3 3 PHE PHE B . n B 1 3 GHP 3 4 4 GHP GHP B . n B 1 4 GHP 4 5 5 GHP GHP B . n B 1 5 OMY 5 6 6 OMY OMY B . n B 1 6 3FG 6 7 7 3FG 3FG B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 MAN 1 101 9 MAN MAN A . F 4 YBJ 1 102 8 YBJ CIM A . G 3 MAN 1 101 9 MAN MAN B . H 4 YBJ 1 102 8 YBJ CIM B . I 5 FMT 1 103 1 FMT FMT B . J 6 HOH 1 201 23 HOH HOH A . J 6 HOH 2 202 25 HOH HOH A . J 6 HOH 3 203 7 HOH HOH A . J 6 HOH 4 204 26 HOH HOH A . J 6 HOH 5 205 19 HOH HOH A . J 6 HOH 6 206 21 HOH HOH A . J 6 HOH 7 207 34 HOH HOH A . J 6 HOH 8 208 5 HOH HOH A . J 6 HOH 9 209 30 HOH HOH A . J 6 HOH 10 210 14 HOH HOH A . J 6 HOH 11 211 11 HOH HOH A . J 6 HOH 12 212 24 HOH HOH A . J 6 HOH 13 213 28 HOH HOH A . J 6 HOH 14 214 22 HOH HOH A . J 6 HOH 15 215 37 HOH HOH A . J 6 HOH 16 216 6 HOH HOH A . J 6 HOH 17 217 4 HOH HOH A . J 6 HOH 18 218 20 HOH HOH A . J 6 HOH 19 219 29 HOH HOH A . J 6 HOH 20 220 16 HOH HOH A . K 6 HOH 1 201 32 HOH HOH B . K 6 HOH 2 202 35 HOH HOH B . K 6 HOH 3 203 27 HOH HOH B . K 6 HOH 4 204 39 HOH HOH B . K 6 HOH 5 205 1 HOH HOH B . K 6 HOH 6 206 8 HOH HOH B . K 6 HOH 7 207 13 HOH HOH B . K 6 HOH 8 208 3 HOH HOH B . K 6 HOH 9 209 2 HOH HOH B . K 6 HOH 10 210 33 HOH HOH B . K 6 HOH 11 211 12 HOH HOH B . K 6 HOH 12 212 40 HOH HOH B . K 6 HOH 13 213 15 HOH HOH B . K 6 HOH 14 214 36 HOH HOH B . K 6 HOH 15 215 17 HOH HOH B . K 6 HOH 16 216 38 HOH HOH B . K 6 HOH 17 217 10 HOH HOH B . K 6 HOH 18 218 31 HOH HOH B . K 6 HOH 19 219 18 HOH HOH B . K 6 HOH 20 220 41 HOH HOH B . K 6 HOH 21 221 9 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,F,J 2 1 B,D,G,H,I,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-12-07 2 'Structure model' 1 1 2023-10-25 3 'Structure model' 2 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Refinement description' 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' pdbx_initial_refinement_model 4 3 'Structure model' atom_site 5 3 'Structure model' chem_comp_atom 6 3 'Structure model' chem_comp_bond 7 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.auth_atom_id' 2 3 'Structure model' '_atom_site.label_atom_id' 3 3 'Structure model' '_chem_comp_atom.atom_id' 4 3 'Structure model' '_chem_comp_bond.atom_id_1' 5 3 'Structure model' '_chem_comp_bond.atom_id_2' 6 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x+1/2,-y+1/2,-z 3 -x,y+1/2,-z+1/2 4 -x+1/2,-y,z+1/2 # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.7.4 1 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17-3644 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 5 # _pdbx_entry_details.entry_id 7LTB _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 3 ? ? -101.56 -63.03 2 1 PHE B 3 ? ? -102.02 -71.23 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 3FG N N N N 1 3FG OD1 O N N 2 3FG CD1 C Y N 3 3FG CG1 C Y N 4 3FG CZ C Y N 5 3FG CD2 C Y N 6 3FG OD2 O N N 7 3FG CG2 C Y N 8 3FG CB C Y N 9 3FG CA C N S 10 3FG C C N N 11 3FG O O N N 12 3FG OXT O N N 13 3FG H H N N 14 3FG H2 H N N 15 3FG HA H N N 16 3FG HD1 H N N 17 3FG HG1 H N N 18 3FG HZ H N N 19 3FG HD2 H N N 20 3FG HG2 H N N 21 3FG HXT H N N 22 BGC C2 C N R 23 BGC C3 C N S 24 BGC C4 C N S 25 BGC C5 C N R 26 BGC C6 C N N 27 BGC C1 C N R 28 BGC O1 O N N 29 BGC O2 O N N 30 BGC O3 O N N 31 BGC O4 O N N 32 BGC O5 O N N 33 BGC O6 O N N 34 BGC H2 H N N 35 BGC H3 H N N 36 BGC H4 H N N 37 BGC H5 H N N 38 BGC H61 H N N 39 BGC H62 H N N 40 BGC H1 H N N 41 BGC HO1 H N N 42 BGC HO2 H N N 43 BGC HO3 H N N 44 BGC HO4 H N N 45 BGC HO6 H N N 46 FMT C C N N 47 FMT O1 O N N 48 FMT O2 O N N 49 FMT H H N N 50 FMT HO2 H N N 51 GHP N N N N 52 GHP CA C N R 53 GHP C C N N 54 GHP O O N N 55 GHP OXT O N N 56 GHP C1 C Y N 57 GHP C2 C Y N 58 GHP C3 C Y N 59 GHP C4 C Y N 60 GHP O4 O N N 61 GHP C5 C Y N 62 GHP C6 C Y N 63 GHP H H N N 64 GHP H2 H N N 65 GHP HA H N N 66 GHP HXT H N N 67 GHP HC2 H N N 68 GHP H3 H N N 69 GHP HO4 H N N 70 GHP H5 H N N 71 GHP H6 H N N 72 HOH O O N N 73 HOH H1 H N N 74 HOH H2 H N N 75 HT0 N N N N 76 HT0 CA C N R 77 HT0 C C N N 78 HT0 O O N N 79 HT0 CB C N R 80 HT0 OB O N N 81 HT0 CG C Y N 82 HT0 CD1 C Y N 83 HT0 CD2 C Y N 84 HT0 CE1 C Y N 85 HT0 CE2 C Y N 86 HT0 CZ C Y N 87 HT0 OH O N N 88 HT0 C1 C N N 89 HT0 O2 O N N 90 HT0 H H N N 91 HT0 HA H N N 92 HT0 HXT H N N 93 HT0 HB H N N 94 HT0 HD1 H N N 95 HT0 HD2 H N N 96 HT0 HE1 H N N 97 HT0 HE2 H N N 98 HT0 H1 H N N 99 HT0 OXT O N N 100 MAN C1 C N S 101 MAN C2 C N S 102 MAN C3 C N S 103 MAN C4 C N S 104 MAN C5 C N R 105 MAN C6 C N N 106 MAN O1 O N N 107 MAN O2 O N N 108 MAN O3 O N N 109 MAN O4 O N N 110 MAN O5 O N N 111 MAN O6 O N N 112 MAN H1 H N N 113 MAN H2 H N N 114 MAN H3 H N N 115 MAN H4 H N N 116 MAN H5 H N N 117 MAN H61 H N N 118 MAN H62 H N N 119 MAN HO1 H N N 120 MAN HO2 H N N 121 MAN HO3 H N N 122 MAN HO4 H N N 123 MAN HO6 H N N 124 OMY N N N N 125 OMY CA C N S 126 OMY OCZ O N N 127 OMY CE2 C Y N 128 OMY CE1 C Y N 129 OMY CZ C Y N 130 OMY CG C Y N 131 OMY CD2 C Y N 132 OMY CD1 C Y N 133 OMY CB C N R 134 OMY CL CL N N 135 OMY O O N N 136 OMY C C N N 137 OMY ODE O N N 138 OMY OXT O N N 139 OMY H H N N 140 OMY H2 H N N 141 OMY HA H N N 142 OMY HCZ H N N 143 OMY HE2 H N N 144 OMY HD2 H N N 145 OMY HD1 H N N 146 OMY HB H N N 147 OMY HXT H N N 148 OMY HDE H N N 149 PHE N N N N 150 PHE CA C N S 151 PHE C C N N 152 PHE O O N N 153 PHE CB C N N 154 PHE CG C Y N 155 PHE CD1 C Y N 156 PHE CD2 C Y N 157 PHE CE1 C Y N 158 PHE CE2 C Y N 159 PHE CZ C Y N 160 PHE OXT O N N 161 PHE H H N N 162 PHE H2 H N N 163 PHE HA H N N 164 PHE HB2 H N N 165 PHE HB3 H N N 166 PHE HD1 H N N 167 PHE HD2 H N N 168 PHE HE1 H N N 169 PHE HE2 H N N 170 PHE HZ H N N 171 PHE HXT H N N 172 YBJ C1 C N R 173 YBJ C2 C N N 174 YBJ C3 C N S 175 YBJ C4 C N R 176 YBJ C5 C N S 177 YBJ N N N N 178 YBJ C C N N 179 YBJ O O N N 180 YBJ C6 C N N 181 YBJ O2 O N N 182 YBJ H9 H N N 183 YBJ H8 H N N 184 YBJ H7 H N N 185 YBJ H2 H N N 186 YBJ H1 H N N 187 YBJ H H N N 188 YBJ H10 H N N 189 YBJ H11 H N N 190 YBJ H4 H N N 191 YBJ H6 H N N 192 YBJ H5 H N N 193 YBJ H13 H N N 194 YBJ H12 H N N 195 YBJ H14 H N N 196 YBJ O1 O N N 197 YBJ H3 H N N 198 Z6G O1 O N N 199 Z6G C1 C N R 200 Z6G C2 C N N 201 Z6G C3 C N S 202 Z6G C4 C N R 203 Z6G C5 C N S 204 Z6G C6 C N N 205 Z6G O2 O N N 206 Z6G O3 O N N 207 Z6G N1 N N N 208 Z6G H1O H N N 209 Z6G H11 H N N 210 Z6G H21 H N N 211 Z6G H22 H N N 212 Z6G H31 H N N 213 Z6G H41 H N N 214 Z6G H51 H N N 215 Z6G H61 H N N 216 Z6G H62 H N N 217 Z6G H63 H N N 218 Z6G H2O H N N 219 Z6G H11N H N N 220 Z6G H12N H N N 221 Z6G "HN'3" H N N 222 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3FG N CA sing N N 1 3FG OD1 CD1 sing N N 2 3FG CD1 CG1 sing Y N 3 3FG CD1 CZ doub Y N 4 3FG CG1 CB doub Y N 5 3FG CZ CD2 sing Y N 6 3FG CD2 OD2 sing N N 7 3FG CD2 CG2 doub Y N 8 3FG CG2 CB sing Y N 9 3FG CB CA sing N N 10 3FG CA C sing N N 11 3FG C O doub N N 12 3FG C OXT sing N N 13 3FG N H sing N N 14 3FG N H2 sing N N 15 3FG CA HA sing N N 16 3FG OD1 HD1 sing N N 17 3FG CG1 HG1 sing N N 18 3FG CZ HZ sing N N 19 3FG OD2 HD2 sing N N 20 3FG CG2 HG2 sing N N 21 3FG OXT HXT sing N N 22 BGC C2 C3 sing N N 23 BGC C2 C1 sing N N 24 BGC C2 O2 sing N N 25 BGC C2 H2 sing N N 26 BGC C3 C4 sing N N 27 BGC C3 O3 sing N N 28 BGC C3 H3 sing N N 29 BGC C4 C5 sing N N 30 BGC C4 O4 sing N N 31 BGC C4 H4 sing N N 32 BGC C5 C6 sing N N 33 BGC C5 O5 sing N N 34 BGC C5 H5 sing N N 35 BGC C6 O6 sing N N 36 BGC C6 H61 sing N N 37 BGC C6 H62 sing N N 38 BGC C1 O1 sing N N 39 BGC C1 O5 sing N N 40 BGC C1 H1 sing N N 41 BGC O1 HO1 sing N N 42 BGC O2 HO2 sing N N 43 BGC O3 HO3 sing N N 44 BGC O4 HO4 sing N N 45 BGC O6 HO6 sing N N 46 FMT C O1 doub N N 47 FMT C O2 sing N N 48 FMT C H sing N N 49 FMT O2 HO2 sing N N 50 GHP N CA sing N N 51 GHP N H sing N N 52 GHP N H2 sing N N 53 GHP CA C sing N N 54 GHP CA C1 sing N N 55 GHP CA HA sing N N 56 GHP C O doub N N 57 GHP C OXT sing N N 58 GHP OXT HXT sing N N 59 GHP C1 C2 doub Y N 60 GHP C1 C6 sing Y N 61 GHP C2 C3 sing Y N 62 GHP C2 HC2 sing N N 63 GHP C3 C4 doub Y N 64 GHP C3 H3 sing N N 65 GHP C4 O4 sing N N 66 GHP C4 C5 sing Y N 67 GHP O4 HO4 sing N N 68 GHP C5 C6 doub Y N 69 GHP C5 H5 sing N N 70 GHP C6 H6 sing N N 71 HOH O H1 sing N N 72 HOH O H2 sing N N 73 HT0 OH CZ sing N N 74 HT0 CE1 CZ doub Y N 75 HT0 CE1 CD1 sing Y N 76 HT0 CZ CE2 sing Y N 77 HT0 CD1 CG doub Y N 78 HT0 O2 C1 doub N N 79 HT0 C1 N sing N N 80 HT0 C1 OB sing N N 81 HT0 CE2 CD2 doub Y N 82 HT0 CG CD2 sing Y N 83 HT0 CG CB sing N N 84 HT0 N CA sing N N 85 HT0 OB CB sing N N 86 HT0 CB CA sing N N 87 HT0 CA C sing N N 88 HT0 C O doub N N 89 HT0 N H sing N N 90 HT0 CA HA sing N N 91 HT0 CB HB sing N N 92 HT0 CD1 HD1 sing N N 93 HT0 CD2 HD2 sing N N 94 HT0 CE1 HE1 sing N N 95 HT0 CE2 HE2 sing N N 96 HT0 OH H1 sing N N 97 HT0 C OXT sing N N 98 HT0 OXT HXT sing N N 99 MAN C1 C2 sing N N 100 MAN C1 O1 sing N N 101 MAN C1 O5 sing N N 102 MAN C1 H1 sing N N 103 MAN C2 C3 sing N N 104 MAN C2 O2 sing N N 105 MAN C2 H2 sing N N 106 MAN C3 C4 sing N N 107 MAN C3 O3 sing N N 108 MAN C3 H3 sing N N 109 MAN C4 C5 sing N N 110 MAN C4 O4 sing N N 111 MAN C4 H4 sing N N 112 MAN C5 C6 sing N N 113 MAN C5 O5 sing N N 114 MAN C5 H5 sing N N 115 MAN C6 O6 sing N N 116 MAN C6 H61 sing N N 117 MAN C6 H62 sing N N 118 MAN O1 HO1 sing N N 119 MAN O2 HO2 sing N N 120 MAN O3 HO3 sing N N 121 MAN O4 HO4 sing N N 122 MAN O6 HO6 sing N N 123 OMY N CA sing N N 124 OMY OCZ CZ sing N N 125 OMY CZ CE2 sing Y N 126 OMY CZ CE1 doub Y N 127 OMY CE2 CD2 doub Y N 128 OMY CD2 CG sing Y N 129 OMY CG CD1 doub Y N 130 OMY CG CB sing N N 131 OMY CD1 CE1 sing Y N 132 OMY CE1 CL sing N N 133 OMY C O doub N N 134 OMY C CA sing N N 135 OMY C OXT sing N N 136 OMY CA CB sing N N 137 OMY CB ODE sing N N 138 OMY N H sing N N 139 OMY N H2 sing N N 140 OMY CA HA sing N N 141 OMY OCZ HCZ sing N N 142 OMY CE2 HE2 sing N N 143 OMY CD2 HD2 sing N N 144 OMY CD1 HD1 sing N N 145 OMY CB HB sing N N 146 OMY OXT HXT sing N N 147 OMY ODE HDE sing N N 148 PHE N CA sing N N 149 PHE N H sing N N 150 PHE N H2 sing N N 151 PHE CA C sing N N 152 PHE CA CB sing N N 153 PHE CA HA sing N N 154 PHE C O doub N N 155 PHE C OXT sing N N 156 PHE CB CG sing N N 157 PHE CB HB2 sing N N 158 PHE CB HB3 sing N N 159 PHE CG CD1 doub Y N 160 PHE CG CD2 sing Y N 161 PHE CD1 CE1 sing Y N 162 PHE CD1 HD1 sing N N 163 PHE CD2 CE2 doub Y N 164 PHE CD2 HD2 sing N N 165 PHE CE1 CZ doub Y N 166 PHE CE1 HE1 sing N N 167 PHE CE2 CZ sing Y N 168 PHE CE2 HE2 sing N N 169 PHE CZ HZ sing N N 170 PHE OXT HXT sing N N 171 YBJ C C5 sing N N 172 YBJ O C5 sing N N 173 YBJ O C1 sing N N 174 YBJ C5 C4 sing N N 175 YBJ C6 O2 sing N N 176 YBJ C4 O2 sing N N 177 YBJ C4 C3 sing N N 178 YBJ C1 C2 sing N N 179 YBJ C2 C3 sing N N 180 YBJ C3 N sing N N 181 YBJ C1 H9 sing N N 182 YBJ C2 H8 sing N N 183 YBJ C2 H7 sing N N 184 YBJ C3 H2 sing N N 185 YBJ C4 H1 sing N N 186 YBJ C5 H sing N N 187 YBJ N H10 sing N N 188 YBJ N H11 sing N N 189 YBJ C H4 sing N N 190 YBJ C H6 sing N N 191 YBJ C H5 sing N N 192 YBJ C6 H13 sing N N 193 YBJ C6 H12 sing N N 194 YBJ C6 H14 sing N N 195 YBJ C1 O1 sing N N 196 YBJ O1 H3 sing N N 197 Z6G O1 C1 sing N N 198 Z6G C1 C2 sing N N 199 Z6G C1 O3 sing N N 200 Z6G C1 H11 sing N N 201 Z6G C2 C3 sing N N 202 Z6G C2 H21 sing N N 203 Z6G C2 H22 sing N N 204 Z6G C3 C4 sing N N 205 Z6G C3 N1 sing N N 206 Z6G C3 H31 sing N N 207 Z6G C4 C5 sing N N 208 Z6G C4 O2 sing N N 209 Z6G C4 H41 sing N N 210 Z6G C5 C6 sing N N 211 Z6G C5 O3 sing N N 212 Z6G C5 H51 sing N N 213 Z6G C6 H61 sing N N 214 Z6G C6 H62 sing N N 215 Z6G C6 H63 sing N N 216 Z6G O2 H2O sing N N 217 Z6G N1 H11N sing N N 218 Z6G N1 H12N sing N N 219 Z6G N1 "HN'3" sing N N 220 Z6G H1O O1 sing N N 221 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' R01GM129496 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' 4R00GM129460 2 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 2 BGC 1 F BGC 1 A BGC 10 n C 2 Z6G 2 F Z6G 2 A S2B 11 n D 2 BGC 1 J BGC 1 B BGC 10 n D 2 Z6G 2 J Z6G 2 B S2B 11 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpb BGC 'COMMON NAME' GMML 1.0 b-D-glucopyranose BGC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Glcp BGC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'WURCS=2.0/2,2,1/[a2122h-1b_1-5][ad211m-1a_1-5_3*N]/1-2/a2-b1' WURCS PDB2Glycan 1.1.0 2 2 '[][D-1-deoxy-Glcp]{[(2+1)][a-L-2,6-deoxy-Glcp3N]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 Z6G _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 BGC _pdbx_entity_branch_link.atom_id_2 O2 _pdbx_entity_branch_link.leaving_atom_id_2 HO2 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 BGC 1 n 2 Z6G 2 n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 3FG ? ? 3FG ? ? 'SUBJECT OF INVESTIGATION' ? 2 BGC ? ? BGC ? ? 'SUBJECT OF INVESTIGATION' ? 3 YBJ ? ? YBJ ? ? 'SUBJECT OF INVESTIGATION' ? 4 FMT ? ? FMT ? ? 'SUBJECT OF INVESTIGATION' ? 5 GHP ? ? GHP ? ? 'SUBJECT OF INVESTIGATION' ? 6 HT0 ? ? HT0 ? ? 'SUBJECT OF INVESTIGATION' ? 7 MAN ? ? MAN ? ? 'SUBJECT OF INVESTIGATION' ? 8 OMY ? ? OMY ? ? 'SUBJECT OF INVESTIGATION' ? 9 Z6G ? ? Z6G ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 alpha-D-mannopyranose MAN 4 '(2~{S},4~{S},5~{R},6~{S})-4-azanyl-5-methoxy-6-methyl-oxan-2-ol' YBJ 5 'FORMIC ACID' FMT 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 7LKC _pdbx_initial_refinement_model.details ? # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 none ;CD studies indicate that the glycopeptide is a monomer at in vivo concentrations, but self-associates under crystallization conditions ; 2 2 none ;CD studies indicate that the glycopeptide is a monomer at in vivo concentrations, but self-associates under crystallization conditions ; # _space_group.name_H-M_alt 'P 21 21 21' _space_group.name_Hall 'P 2ac 2ab' _space_group.IT_number 19 _space_group.crystal_system orthorhombic _space_group.id 1 #