data_7NLI # _entry.id 7NLI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7NLI pdb_00007nli 10.2210/pdb7nli/pdb WWPDB D_1292114115 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-10-06 2 'Structure model' 1 1 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' diffrn_source 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' struct_ncs_dom_lim # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 2 2 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 3 2 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 4 2 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 5 2 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 6 2 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 7 2 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 8 2 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 9 2 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7NLI _pdbx_database_status.recvd_initial_deposition_date 2021-02-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'Different construct same lattice, shares Rfree set' 7NLH unspecified PDB 'Different construct same lattice, shares Rfree set' 7NLG unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Cottee, M.A.' 1 0000-0002-3619-3057 'Letham, S.C.' 2 0000-0002-3558-3221 'Taylor, I.A.' 3 0000-0002-6763-3852 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 12 _citation.language ? _citation.page_first 5590 _citation.page_last 5590 _citation.title 'Structure of a Ty1 restriction factor reveals the molecular basis of transposition copy number control.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-021-25849-0 _citation.pdbx_database_id_PubMed 34552077 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cottee, M.A.' 1 0000-0002-3619-3057 primary 'Beckwith, S.L.' 2 0000-0001-6559-1030 primary 'Letham, S.C.' 3 0000-0002-3558-3221 primary 'Kim, S.J.' 4 ? primary 'Young, G.R.' 5 0000-0002-1203-588X primary 'Stoye, J.P.' 6 0000-0003-3377-323X primary 'Garfinkel, D.J.' 7 0000-0001-6234-2426 primary 'Taylor, I.A.' 8 0000-0002-6763-3852 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Ty1 Gag p22' _entity.formula_weight 12431.392 _entity.pdbx_number_of_molecules 3 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Gag CA-CTD, AUG2 variant,Capsid protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)QSDTQEANDIVTLANLQYNGSTPADAFETKVTNIIDRLNNNGIHINNKVACQLI(MSE)RGLSGEYKFLRYTRHR HLN(MSE)TVAELFLDIHAIYEEQQGSRNPLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MQSDTQEANDIVTLANLQYNGSTPADAFETKVTNIIDRLNNNGIHINNKVACQLIMRGLSGEYKFLRYTRHRHLNMTVAE LFLDIHAIYEEQQGSRNPLEHHHHHH ; _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLN n 1 3 SER n 1 4 ASP n 1 5 THR n 1 6 GLN n 1 7 GLU n 1 8 ALA n 1 9 ASN n 1 10 ASP n 1 11 ILE n 1 12 VAL n 1 13 THR n 1 14 LEU n 1 15 ALA n 1 16 ASN n 1 17 LEU n 1 18 GLN n 1 19 TYR n 1 20 ASN n 1 21 GLY n 1 22 SER n 1 23 THR n 1 24 PRO n 1 25 ALA n 1 26 ASP n 1 27 ALA n 1 28 PHE n 1 29 GLU n 1 30 THR n 1 31 LYS n 1 32 VAL n 1 33 THR n 1 34 ASN n 1 35 ILE n 1 36 ILE n 1 37 ASP n 1 38 ARG n 1 39 LEU n 1 40 ASN n 1 41 ASN n 1 42 ASN n 1 43 GLY n 1 44 ILE n 1 45 HIS n 1 46 ILE n 1 47 ASN n 1 48 ASN n 1 49 LYS n 1 50 VAL n 1 51 ALA n 1 52 CYS n 1 53 GLN n 1 54 LEU n 1 55 ILE n 1 56 MSE n 1 57 ARG n 1 58 GLY n 1 59 LEU n 1 60 SER n 1 61 GLY n 1 62 GLU n 1 63 TYR n 1 64 LYS n 1 65 PHE n 1 66 LEU n 1 67 ARG n 1 68 TYR n 1 69 THR n 1 70 ARG n 1 71 HIS n 1 72 ARG n 1 73 HIS n 1 74 LEU n 1 75 ASN n 1 76 MSE n 1 77 THR n 1 78 VAL n 1 79 ALA n 1 80 GLU n 1 81 LEU n 1 82 PHE n 1 83 LEU n 1 84 ASP n 1 85 ILE n 1 86 HIS n 1 87 ALA n 1 88 ILE n 1 89 TYR n 1 90 GLU n 1 91 GLU n 1 92 GLN n 1 93 GLN n 1 94 GLY n 1 95 SER n 1 96 ARG n 1 97 ASN n 1 98 PRO n 1 99 LEU n 1 100 GLU n 1 101 HIS n 1 102 HIS n 1 103 HIS n 1 104 HIS n 1 105 HIS n 1 106 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 106 _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'TY1A, GAG, TYA1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain S288C _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain B834 _entity_src_gen.pdbx_host_org_variant DE3 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET22b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 259 ? ? ? A . n A 1 2 GLN 2 260 ? ? ? A . n A 1 3 SER 3 261 261 SER SER A . n A 1 4 ASP 4 262 262 ASP ASP A . n A 1 5 THR 5 263 263 THR THR A . n A 1 6 GLN 6 264 264 GLN GLN A . n A 1 7 GLU 7 265 265 GLU GLU A . n A 1 8 ALA 8 266 266 ALA ALA A . n A 1 9 ASN 9 267 267 ASN ASN A . n A 1 10 ASP 10 268 268 ASP ASP A . n A 1 11 ILE 11 269 269 ILE ILE A . n A 1 12 VAL 12 270 270 VAL VAL A . n A 1 13 THR 13 271 271 THR THR A . n A 1 14 LEU 14 272 272 LEU LEU A . n A 1 15 ALA 15 273 273 ALA ALA A . n A 1 16 ASN 16 274 274 ASN ASN A . n A 1 17 LEU 17 275 275 LEU LEU A . n A 1 18 GLN 18 276 276 GLN GLN A . n A 1 19 TYR 19 277 277 TYR TYR A . n A 1 20 ASN 20 278 278 ASN ASN A . n A 1 21 GLY 21 279 279 GLY GLY A . n A 1 22 SER 22 280 280 SER SER A . n A 1 23 THR 23 281 281 THR THR A . n A 1 24 PRO 24 282 282 PRO PRO A . n A 1 25 ALA 25 283 283 ALA ALA A . n A 1 26 ASP 26 284 284 ASP ASP A . n A 1 27 ALA 27 285 285 ALA ALA A . n A 1 28 PHE 28 286 286 PHE PHE A . n A 1 29 GLU 29 287 287 GLU GLU A . n A 1 30 THR 30 288 288 THR THR A . n A 1 31 LYS 31 289 289 LYS LYS A . n A 1 32 VAL 32 290 290 VAL VAL A . n A 1 33 THR 33 291 291 THR THR A . n A 1 34 ASN 34 292 292 ASN ASN A . n A 1 35 ILE 35 293 293 ILE ILE A . n A 1 36 ILE 36 294 294 ILE ILE A . n A 1 37 ASP 37 295 295 ASP ASP A . n A 1 38 ARG 38 296 296 ARG ARG A . n A 1 39 LEU 39 297 297 LEU LEU A . n A 1 40 ASN 40 298 298 ASN ASN A . n A 1 41 ASN 41 299 299 ASN ASN A . n A 1 42 ASN 42 300 300 ASN ASN A . n A 1 43 GLY 43 301 301 GLY GLY A . n A 1 44 ILE 44 302 302 ILE ILE A . n A 1 45 HIS 45 303 303 HIS HIS A . n A 1 46 ILE 46 304 304 ILE ILE A . n A 1 47 ASN 47 305 305 ASN ASN A . n A 1 48 ASN 48 306 306 ASN ASN A . n A 1 49 LYS 49 307 307 LYS LYS A . n A 1 50 VAL 50 308 308 VAL VAL A . n A 1 51 ALA 51 309 309 ALA ALA A . n A 1 52 CYS 52 310 310 CYS CYS A . n A 1 53 GLN 53 311 311 GLN GLN A . n A 1 54 LEU 54 312 312 LEU LEU A . n A 1 55 ILE 55 313 313 ILE ILE A . n A 1 56 MSE 56 314 314 MSE MSE A . n A 1 57 ARG 57 315 315 ARG ARG A . n A 1 58 GLY 58 316 316 GLY GLY A . n A 1 59 LEU 59 317 317 LEU LEU A . n A 1 60 SER 60 318 318 SER SER A . n A 1 61 GLY 61 319 319 GLY GLY A . n A 1 62 GLU 62 320 320 GLU GLU A . n A 1 63 TYR 63 321 321 TYR TYR A . n A 1 64 LYS 64 322 322 LYS LYS A . n A 1 65 PHE 65 323 323 PHE PHE A . n A 1 66 LEU 66 324 324 LEU LEU A . n A 1 67 ARG 67 325 325 ARG ARG A . n A 1 68 TYR 68 326 326 TYR TYR A . n A 1 69 THR 69 327 327 THR THR A . n A 1 70 ARG 70 328 328 ARG ARG A . n A 1 71 HIS 71 329 329 HIS HIS A . n A 1 72 ARG 72 330 330 ARG ARG A . n A 1 73 HIS 73 331 331 HIS HIS A . n A 1 74 LEU 74 332 332 LEU LEU A . n A 1 75 ASN 75 333 333 ASN ASN A . n A 1 76 MSE 76 334 334 MSE MSE A . n A 1 77 THR 77 335 335 THR THR A . n A 1 78 VAL 78 336 336 VAL VAL A . n A 1 79 ALA 79 337 337 ALA ALA A . n A 1 80 GLU 80 338 338 GLU GLU A . n A 1 81 LEU 81 339 339 LEU LEU A . n A 1 82 PHE 82 340 340 PHE PHE A . n A 1 83 LEU 83 341 341 LEU LEU A . n A 1 84 ASP 84 342 342 ASP ASP A . n A 1 85 ILE 85 343 343 ILE ILE A . n A 1 86 HIS 86 344 344 HIS HIS A . n A 1 87 ALA 87 345 345 ALA ALA A . n A 1 88 ILE 88 346 346 ILE ILE A . n A 1 89 TYR 89 347 347 TYR TYR A . n A 1 90 GLU 90 348 348 GLU GLU A . n A 1 91 GLU 91 349 349 GLU GLU A . n A 1 92 GLN 92 350 350 GLN GLN A . n A 1 93 GLN 93 351 351 GLN GLN A . n A 1 94 GLY 94 352 ? ? ? A . n A 1 95 SER 95 353 ? ? ? A . n A 1 96 ARG 96 354 ? ? ? A . n A 1 97 ASN 97 355 ? ? ? A . n A 1 98 PRO 98 356 ? ? ? A . n A 1 99 LEU 99 357 ? ? ? A . n A 1 100 GLU 100 358 ? ? ? A . n A 1 101 HIS 101 359 ? ? ? A . n A 1 102 HIS 102 360 ? ? ? A . n A 1 103 HIS 103 361 ? ? ? A . n A 1 104 HIS 104 362 ? ? ? A . n A 1 105 HIS 105 363 ? ? ? A . n A 1 106 HIS 106 364 ? ? ? A . n B 1 1 MSE 1 259 ? ? ? B . n B 1 2 GLN 2 260 ? ? ? B . n B 1 3 SER 3 261 261 SER SER B . n B 1 4 ASP 4 262 262 ASP ASP B . n B 1 5 THR 5 263 263 THR THR B . n B 1 6 GLN 6 264 264 GLN GLN B . n B 1 7 GLU 7 265 265 GLU GLU B . n B 1 8 ALA 8 266 266 ALA ALA B . n B 1 9 ASN 9 267 267 ASN ASN B . n B 1 10 ASP 10 268 268 ASP ASP B . n B 1 11 ILE 11 269 269 ILE ILE B . n B 1 12 VAL 12 270 270 VAL VAL B . n B 1 13 THR 13 271 271 THR THR B . n B 1 14 LEU 14 272 272 LEU LEU B . n B 1 15 ALA 15 273 273 ALA ALA B . n B 1 16 ASN 16 274 274 ASN ASN B . n B 1 17 LEU 17 275 275 LEU LEU B . n B 1 18 GLN 18 276 276 GLN GLN B . n B 1 19 TYR 19 277 277 TYR TYR B . n B 1 20 ASN 20 278 278 ASN ASN B . n B 1 21 GLY 21 279 279 GLY GLY B . n B 1 22 SER 22 280 280 SER SER B . n B 1 23 THR 23 281 281 THR THR B . n B 1 24 PRO 24 282 282 PRO PRO B . n B 1 25 ALA 25 283 283 ALA ALA B . n B 1 26 ASP 26 284 284 ASP ASP B . n B 1 27 ALA 27 285 285 ALA ALA B . n B 1 28 PHE 28 286 286 PHE PHE B . n B 1 29 GLU 29 287 287 GLU GLU B . n B 1 30 THR 30 288 288 THR THR B . n B 1 31 LYS 31 289 289 LYS LYS B . n B 1 32 VAL 32 290 290 VAL VAL B . n B 1 33 THR 33 291 291 THR THR B . n B 1 34 ASN 34 292 292 ASN ASN B . n B 1 35 ILE 35 293 293 ILE ILE B . n B 1 36 ILE 36 294 294 ILE ILE B . n B 1 37 ASP 37 295 295 ASP ASP B . n B 1 38 ARG 38 296 296 ARG ARG B . n B 1 39 LEU 39 297 297 LEU LEU B . n B 1 40 ASN 40 298 298 ASN ASN B . n B 1 41 ASN 41 299 299 ASN ASN B . n B 1 42 ASN 42 300 300 ASN ASN B . n B 1 43 GLY 43 301 301 GLY GLY B . n B 1 44 ILE 44 302 302 ILE ILE B . n B 1 45 HIS 45 303 303 HIS HIS B . n B 1 46 ILE 46 304 304 ILE ILE B . n B 1 47 ASN 47 305 305 ASN ASN B . n B 1 48 ASN 48 306 306 ASN ASN B . n B 1 49 LYS 49 307 307 LYS LYS B . n B 1 50 VAL 50 308 308 VAL VAL B . n B 1 51 ALA 51 309 309 ALA ALA B . n B 1 52 CYS 52 310 310 CYS CYS B . n B 1 53 GLN 53 311 311 GLN GLN B . n B 1 54 LEU 54 312 312 LEU LEU B . n B 1 55 ILE 55 313 313 ILE ILE B . n B 1 56 MSE 56 314 314 MSE MSE B . n B 1 57 ARG 57 315 315 ARG ARG B . n B 1 58 GLY 58 316 316 GLY GLY B . n B 1 59 LEU 59 317 317 LEU LEU B . n B 1 60 SER 60 318 318 SER SER B . n B 1 61 GLY 61 319 319 GLY GLY B . n B 1 62 GLU 62 320 320 GLU GLU B . n B 1 63 TYR 63 321 321 TYR TYR B . n B 1 64 LYS 64 322 322 LYS LYS B . n B 1 65 PHE 65 323 323 PHE PHE B . n B 1 66 LEU 66 324 324 LEU LEU B . n B 1 67 ARG 67 325 325 ARG ARG B . n B 1 68 TYR 68 326 326 TYR TYR B . n B 1 69 THR 69 327 327 THR THR B . n B 1 70 ARG 70 328 328 ARG ARG B . n B 1 71 HIS 71 329 329 HIS HIS B . n B 1 72 ARG 72 330 330 ARG ARG B . n B 1 73 HIS 73 331 331 HIS HIS B . n B 1 74 LEU 74 332 332 LEU LEU B . n B 1 75 ASN 75 333 333 ASN ASN B . n B 1 76 MSE 76 334 334 MSE MSE B . n B 1 77 THR 77 335 335 THR THR B . n B 1 78 VAL 78 336 336 VAL VAL B . n B 1 79 ALA 79 337 337 ALA ALA B . n B 1 80 GLU 80 338 338 GLU GLU B . n B 1 81 LEU 81 339 339 LEU LEU B . n B 1 82 PHE 82 340 340 PHE PHE B . n B 1 83 LEU 83 341 341 LEU LEU B . n B 1 84 ASP 84 342 342 ASP ASP B . n B 1 85 ILE 85 343 343 ILE ILE B . n B 1 86 HIS 86 344 344 HIS HIS B . n B 1 87 ALA 87 345 345 ALA ALA B . n B 1 88 ILE 88 346 346 ILE ILE B . n B 1 89 TYR 89 347 347 TYR TYR B . n B 1 90 GLU 90 348 348 GLU GLU B . n B 1 91 GLU 91 349 349 GLU GLU B . n B 1 92 GLN 92 350 350 GLN GLN B . n B 1 93 GLN 93 351 351 GLN GLN B . n B 1 94 GLY 94 352 352 GLY GLY B . n B 1 95 SER 95 353 ? ? ? B . n B 1 96 ARG 96 354 ? ? ? B . n B 1 97 ASN 97 355 ? ? ? B . n B 1 98 PRO 98 356 ? ? ? B . n B 1 99 LEU 99 357 ? ? ? B . n B 1 100 GLU 100 358 ? ? ? B . n B 1 101 HIS 101 359 ? ? ? B . n B 1 102 HIS 102 360 ? ? ? B . n B 1 103 HIS 103 361 ? ? ? B . n B 1 104 HIS 104 362 ? ? ? B . n B 1 105 HIS 105 363 ? ? ? B . n B 1 106 HIS 106 364 ? ? ? B . n C 1 1 MSE 1 259 ? ? ? C . n C 1 2 GLN 2 260 ? ? ? C . n C 1 3 SER 3 261 261 SER SER C . n C 1 4 ASP 4 262 262 ASP ASP C . n C 1 5 THR 5 263 263 THR THR C . n C 1 6 GLN 6 264 264 GLN GLN C . n C 1 7 GLU 7 265 265 GLU GLU C . n C 1 8 ALA 8 266 266 ALA ALA C . n C 1 9 ASN 9 267 267 ASN ASN C . n C 1 10 ASP 10 268 268 ASP ASP C . n C 1 11 ILE 11 269 269 ILE ILE C . n C 1 12 VAL 12 270 270 VAL VAL C . n C 1 13 THR 13 271 271 THR THR C . n C 1 14 LEU 14 272 272 LEU LEU C . n C 1 15 ALA 15 273 273 ALA ALA C . n C 1 16 ASN 16 274 274 ASN ASN C . n C 1 17 LEU 17 275 275 LEU LEU C . n C 1 18 GLN 18 276 276 GLN GLN C . n C 1 19 TYR 19 277 277 TYR TYR C . n C 1 20 ASN 20 278 278 ASN ASN C . n C 1 21 GLY 21 279 279 GLY GLY C . n C 1 22 SER 22 280 280 SER SER C . n C 1 23 THR 23 281 281 THR THR C . n C 1 24 PRO 24 282 282 PRO PRO C . n C 1 25 ALA 25 283 283 ALA ALA C . n C 1 26 ASP 26 284 284 ASP ASP C . n C 1 27 ALA 27 285 285 ALA ALA C . n C 1 28 PHE 28 286 286 PHE PHE C . n C 1 29 GLU 29 287 287 GLU GLU C . n C 1 30 THR 30 288 288 THR THR C . n C 1 31 LYS 31 289 289 LYS LYS C . n C 1 32 VAL 32 290 290 VAL VAL C . n C 1 33 THR 33 291 291 THR THR C . n C 1 34 ASN 34 292 292 ASN ASN C . n C 1 35 ILE 35 293 293 ILE ILE C . n C 1 36 ILE 36 294 294 ILE ILE C . n C 1 37 ASP 37 295 295 ASP ASP C . n C 1 38 ARG 38 296 296 ARG ARG C . n C 1 39 LEU 39 297 297 LEU LEU C . n C 1 40 ASN 40 298 298 ASN ASN C . n C 1 41 ASN 41 299 299 ASN ASN C . n C 1 42 ASN 42 300 300 ASN ASN C . n C 1 43 GLY 43 301 301 GLY GLY C . n C 1 44 ILE 44 302 302 ILE ILE C . n C 1 45 HIS 45 303 303 HIS HIS C . n C 1 46 ILE 46 304 304 ILE ILE C . n C 1 47 ASN 47 305 305 ASN ASN C . n C 1 48 ASN 48 306 306 ASN ASN C . n C 1 49 LYS 49 307 307 LYS LYS C . n C 1 50 VAL 50 308 308 VAL VAL C . n C 1 51 ALA 51 309 309 ALA ALA C . n C 1 52 CYS 52 310 310 CYS CYS C . n C 1 53 GLN 53 311 311 GLN GLN C . n C 1 54 LEU 54 312 312 LEU LEU C . n C 1 55 ILE 55 313 313 ILE ILE C . n C 1 56 MSE 56 314 314 MSE MSE C . n C 1 57 ARG 57 315 315 ARG ARG C . n C 1 58 GLY 58 316 316 GLY GLY C . n C 1 59 LEU 59 317 317 LEU LEU C . n C 1 60 SER 60 318 318 SER SER C . n C 1 61 GLY 61 319 319 GLY GLY C . n C 1 62 GLU 62 320 320 GLU GLU C . n C 1 63 TYR 63 321 321 TYR TYR C . n C 1 64 LYS 64 322 322 LYS LYS C . n C 1 65 PHE 65 323 323 PHE PHE C . n C 1 66 LEU 66 324 324 LEU LEU C . n C 1 67 ARG 67 325 325 ARG ARG C . n C 1 68 TYR 68 326 326 TYR TYR C . n C 1 69 THR 69 327 327 THR THR C . n C 1 70 ARG 70 328 328 ARG ARG C . n C 1 71 HIS 71 329 329 HIS HIS C . n C 1 72 ARG 72 330 330 ARG ARG C . n C 1 73 HIS 73 331 331 HIS HIS C . n C 1 74 LEU 74 332 332 LEU LEU C . n C 1 75 ASN 75 333 333 ASN ASN C . n C 1 76 MSE 76 334 334 MSE MSE C . n C 1 77 THR 77 335 335 THR THR C . n C 1 78 VAL 78 336 336 VAL VAL C . n C 1 79 ALA 79 337 337 ALA ALA C . n C 1 80 GLU 80 338 338 GLU GLU C . n C 1 81 LEU 81 339 339 LEU LEU C . n C 1 82 PHE 82 340 340 PHE PHE C . n C 1 83 LEU 83 341 341 LEU LEU C . n C 1 84 ASP 84 342 342 ASP ASP C . n C 1 85 ILE 85 343 343 ILE ILE C . n C 1 86 HIS 86 344 344 HIS HIS C . n C 1 87 ALA 87 345 345 ALA ALA C . n C 1 88 ILE 88 346 346 ILE ILE C . n C 1 89 TYR 89 347 347 TYR TYR C . n C 1 90 GLU 90 348 348 GLU GLU C . n C 1 91 GLU 91 349 349 GLU GLU C . n C 1 92 GLN 92 350 350 GLN GLN C . n C 1 93 GLN 93 351 351 GLN GLN C . n C 1 94 GLY 94 352 ? ? ? C . n C 1 95 SER 95 353 ? ? ? C . n C 1 96 ARG 96 354 ? ? ? C . n C 1 97 ASN 97 355 ? ? ? C . n C 1 98 PRO 98 356 ? ? ? C . n C 1 99 LEU 99 357 ? ? ? C . n C 1 100 GLU 100 358 ? ? ? C . n C 1 101 HIS 101 359 ? ? ? C . n C 1 102 HIS 102 360 ? ? ? C . n C 1 103 HIS 103 361 ? ? ? C . n C 1 104 HIS 104 362 ? ? ? C . n C 1 105 HIS 105 363 ? ? ? C . n C 1 106 HIS 106 364 ? ? ? C . n # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.14_3260 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0258 2 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? 0.8.9.2 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DIALS ? ? ? 1.6.3 5 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.6.2 6 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXDE ? ? ? 2018/1 7 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 7NLI _cell.details ? _cell.formula_units_Z ? _cell.length_a 280.890 _cell.length_a_esd ? _cell.length_b 280.890 _cell.length_b_esd ? _cell.length_c 40.405 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 36 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NLI _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7NLI _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 6.42 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 80.86 _exptl_crystal.description '80x80x250 um hexagonal prismic rod.' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;260 nL Protein (13.6 mg/ml in 50 mM Sodium Acetate pH 5.0, 300 mM NaCl 1mM TCEP) 120 nL Mother Liquor (27.9% Glycerol, 17.7% PEG 4K 0.1M HEPES pH 7.5) 20 nL Seed solution (seeds in 20% Glycerol, 31% PEG 4K 0.1M HEPES pH 7.5) ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-03-08 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97928 1.0 2 0.97943 1.0 3 0.97281 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list '0.97928, 0.97943, 0.97281' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_synchrotron_site Diamond # loop_ _reflns.B_iso_Wilson_estimate _reflns.entry_id _reflns.data_reduction_details _reflns.data_reduction_method _reflns.d_resolution_high _reflns.d_resolution_low _reflns.details _reflns.limit_h_max _reflns.limit_h_min _reflns.limit_k_max _reflns.limit_k_min _reflns.limit_l_max _reflns.limit_l_min _reflns.number_all _reflns.number_obs _reflns.observed_criterion _reflns.observed_criterion_F_max _reflns.observed_criterion_F_min _reflns.observed_criterion_I_max _reflns.observed_criterion_I_min _reflns.observed_criterion_sigma_F _reflns.observed_criterion_sigma_I _reflns.percent_possible_obs _reflns.R_free_details _reflns.Rmerge_F_all _reflns.Rmerge_F_obs _reflns.Friedel_coverage _reflns.number_gt _reflns.threshold_expression _reflns.pdbx_redundancy _reflns.pdbx_Rmerge_I_obs _reflns.pdbx_Rmerge_I_all _reflns.pdbx_Rsym_value _reflns.pdbx_netI_over_av_sigmaI _reflns.pdbx_netI_over_sigmaI _reflns.pdbx_res_netI_over_av_sigmaI_2 _reflns.pdbx_res_netI_over_sigmaI_2 _reflns.pdbx_chi_squared _reflns.pdbx_scaling_rejects _reflns.pdbx_d_res_high_opt _reflns.pdbx_d_res_low_opt _reflns.pdbx_d_res_opt_method _reflns.phase_calculation_details _reflns.pdbx_Rrim_I_all _reflns.pdbx_Rpim_I_all _reflns.pdbx_d_opt _reflns.pdbx_number_measured_all _reflns.pdbx_diffrn_id _reflns.pdbx_ordinal _reflns.pdbx_CC_half _reflns.pdbx_CC_star _reflns.pdbx_R_split ? 7NLI ? ? 3.1190 140.45 ? ? ? ? ? ? ? ? 31760 ? ? ? ? ? ? ? 100 ? ? ? ? ? ? 112.8 ? ? ? ? 24.5 ? ? ? ? ? ? ? ? 0.246 ? ? ? 1 1 0.983 ? ? ? 7NLI ? ? 3.5 92.17 ? ? ? ? ? ? ? ? 22756 ? ? ? ? ? ? ? 100 ? ? ? ? ? ? 55.4 ? ? ? ? 16.0 ? ? ? ? ? ? ? ? 0.231 0.042 ? ? 1 2 0.999 ? ? ? 7NLI ? ? 3.41 81.17 ? ? ? ? ? ? ? ? 24442 ? ? ? ? ? ? ? 100 ? ? ? ? ? ? 55.5 ? ? ? ? 16.5 ? ? ? ? ? ? ? ? 0.230 0.042 ? ? 1 3 0.999 ? ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 3.1190 3.33 ? 6.8 ? ? ? ? 5059 100 ? ? ? ? ? ? ? ? ? ? ? ? ? 115.8 ? ? ? ? 1.313 0.167 ? 1 1 0.760 ? ? 3.50 3.83 ? 5.2 ? ? ? ? 2927 100 ? ? ? ? ? ? ? ? ? ? ? ? ? 56.7 ? ? ? ? 0.970 0.177 ? 2 1 1.0 ? ? 3.41 3.68 ? 5.0 ? ? ? ? 2736 100 ? ? ? ? ? ? ? ? ? ? ? ? ? 56.5 ? ? ? ? 1.004 0.192 ? 3 1 1.0 ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 192.620 _refine.B_iso_mean 94.9444 _refine.B_iso_min 41.450 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ;Refinement carried out using Peak wavelength (0.97928 A) dataset, with Friedel pairs separated to account for anomalous signal. Columns used: F_PEAK(+), SIGF_PEAK(+), F_PEAK(-), SIGF_PEAK(-) or I_PEAK(+), SIGI_PEAK(+), I_PEAK(-), SIGI_PEAK(-). Experimentally measured F'=-8.15 and F''=6.44. ; _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7NLI _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.1190 _refine.ls_d_res_low 91.9430 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 31754 _refine.ls_number_reflns_R_free 1663 _refine.ls_number_reflns_R_work 30091 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.9300 _refine.ls_percent_reflns_R_free 5.2400 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2346 _refine.ls_R_factor_R_free 0.2578 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2334 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.460 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model 'Ty1 p22' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details 'Matches related structures' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 27.5400 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.4900 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 3.1190 _refine_hist.d_res_low 91.9430 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2203 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 274 _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2203 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight _refine_ls_restr_ncs.pdbx_ens_id 'X-RAY DIFFRACTION' 1 ? ? ? ? ? 1 TORSIONAL ? A 753 7.603 ? 1 'X-RAY DIFFRACTION' 2 ? ? ? ? ? 2 TORSIONAL ? B 753 7.603 ? 1 'X-RAY DIFFRACTION' 3 ? ? ? ? ? 3 TORSIONAL ? C 753 7.603 ? 1 # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 3.1190 3.2107 . . 152 2430 100.0000 . . . 0.3883 0.0000 0.3396 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2107 3.3144 . . 130 2539 100.0000 . . . 0.3185 0.0000 0.3333 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.3144 3.4328 . . 131 2522 100.0000 . . . 0.3245 0.0000 0.2956 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4328 3.5703 . . 131 2502 100.0000 . . . 0.3560 0.0000 0.2952 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5703 3.7328 . . 119 2556 100.0000 . . . 0.3242 0.0000 0.2733 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.7328 3.9296 . . 115 2498 100.0000 . . . 0.2725 0.0000 0.2730 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.9296 4.1758 . . 140 2522 100.0000 . . . 0.2915 0.0000 0.2181 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.1758 4.4982 . . 168 2519 100.0000 . . . 0.2299 0.0000 0.2106 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.4982 4.9509 . . 131 2484 100.0000 . . . 0.2230 0.0000 0.2005 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.9509 5.6672 . . 143 2529 100.0000 . . . 0.2208 0.0000 0.2171 . . . . . . . . . . . 'X-RAY DIFFRACTION' 5.6672 7.1396 . . 173 2453 100.0000 . . . 0.2807 0.0000 0.2292 . . . . . . . . . . . 'X-RAY DIFFRACTION' 7.1396 91.943 . . 130 2537 100.0000 . . . 0.1802 0.0000 0.1816 . . . . . . . . . . . # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 '(chain A and (resid 261 through 302 or resid 304 through 322 or resid 324 through 351))' 1 2 '(chain B and (resid 261 through 302 or resid 304 through 322 or resid 324 through 351))' 1 3 '(chain C and (resid 261 through 302 or resid 304 through 322 or resid 324 through 351))' # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A SER 3 . A ILE 44 . A SER 261 A ILE 302 ? '(chain A and (resid 261 through 302 or resid 304 through 322 or resid 324 through 351))' 1 1 2 A ILE 46 . A LYS 64 . A ILE 304 A LYS 322 ? '(chain A and (resid 261 through 302 or resid 304 through 322 or resid 324 through 351))' 1 1 3 A LEU 66 . A GLN 93 . A LEU 324 A GLN 351 ? '(chain A and (resid 261 through 302 or resid 304 through 322 or resid 324 through 351))' 1 2 1 B SER 3 . B ILE 44 . B SER 261 B ILE 302 ? '(chain B and (resid 261 through 302 or resid 304 through 322 or resid 324 through 351))' 1 2 2 B ILE 46 . B LYS 64 . B ILE 304 B LYS 322 ? '(chain B and (resid 261 through 302 or resid 304 through 322 or resid 324 through 351))' 1 2 3 B LEU 66 . B GLN 93 . B LEU 324 B GLN 351 ? '(chain B and (resid 261 through 302 or resid 304 through 322 or resid 324 through 351))' 1 3 1 C SER 3 . C ILE 44 . C SER 261 C ILE 302 ? '(chain C and (resid 261 through 302 or resid 304 through 322 or resid 324 through 351))' 1 3 2 C ILE 46 . C LYS 64 . C ILE 304 C LYS 322 ? '(chain C and (resid 261 through 302 or resid 304 through 322 or resid 324 through 351))' 1 3 3 C LEU 66 . C GLN 93 . C LEU 324 C GLN 351 ? '(chain C and (resid 261 through 302 or resid 304 through 322 or resid 324 through 351))' # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 7NLI _struct.title 'S. cerevisiae Ty1 p22 restriction factor, Gag CA-CTD, AUG2 variant' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7NLI _struct_keywords.text 'Restriction factor, Ty1, Gag, CA, VIRUS LIKE PARTICLE' _struct_keywords.pdbx_keywords 'VIRUS LIKE PARTICLE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TY1A_YEASX _struct_ref.pdbx_db_accession P08405 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MQSDTQEANDIVTLANLQYNGSTPADAFETKVTNIIDRLNNNGIHINNKVACQLIMRGLSGEYKFLRYTRHRHLNMTVAE LFLDIHAIYEEQQGSRN ; _struct_ref.pdbx_align_begin 259 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7NLI A 1 ? 97 ? P08405 259 ? 355 ? 259 355 2 1 7NLI B 1 ? 97 ? P08405 259 ? 355 ? 259 355 3 1 7NLI C 1 ? 97 ? P08405 259 ? 355 ? 259 355 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7NLI PRO A 98 ? UNP P08405 ? ? 'expression tag' 356 1 1 7NLI LEU A 99 ? UNP P08405 ? ? 'expression tag' 357 2 1 7NLI GLU A 100 ? UNP P08405 ? ? 'expression tag' 358 3 1 7NLI HIS A 101 ? UNP P08405 ? ? 'expression tag' 359 4 1 7NLI HIS A 102 ? UNP P08405 ? ? 'expression tag' 360 5 1 7NLI HIS A 103 ? UNP P08405 ? ? 'expression tag' 361 6 1 7NLI HIS A 104 ? UNP P08405 ? ? 'expression tag' 362 7 1 7NLI HIS A 105 ? UNP P08405 ? ? 'expression tag' 363 8 1 7NLI HIS A 106 ? UNP P08405 ? ? 'expression tag' 364 9 2 7NLI PRO B 98 ? UNP P08405 ? ? 'expression tag' 356 10 2 7NLI LEU B 99 ? UNP P08405 ? ? 'expression tag' 357 11 2 7NLI GLU B 100 ? UNP P08405 ? ? 'expression tag' 358 12 2 7NLI HIS B 101 ? UNP P08405 ? ? 'expression tag' 359 13 2 7NLI HIS B 102 ? UNP P08405 ? ? 'expression tag' 360 14 2 7NLI HIS B 103 ? UNP P08405 ? ? 'expression tag' 361 15 2 7NLI HIS B 104 ? UNP P08405 ? ? 'expression tag' 362 16 2 7NLI HIS B 105 ? UNP P08405 ? ? 'expression tag' 363 17 2 7NLI HIS B 106 ? UNP P08405 ? ? 'expression tag' 364 18 3 7NLI PRO C 98 ? UNP P08405 ? ? 'expression tag' 356 19 3 7NLI LEU C 99 ? UNP P08405 ? ? 'expression tag' 357 20 3 7NLI GLU C 100 ? UNP P08405 ? ? 'expression tag' 358 21 3 7NLI HIS C 101 ? UNP P08405 ? ? 'expression tag' 359 22 3 7NLI HIS C 102 ? UNP P08405 ? ? 'expression tag' 360 23 3 7NLI HIS C 103 ? UNP P08405 ? ? 'expression tag' 361 24 3 7NLI HIS C 104 ? UNP P08405 ? ? 'expression tag' 362 25 3 7NLI HIS C 105 ? UNP P08405 ? ? 'expression tag' 363 26 3 7NLI HIS C 106 ? UNP P08405 ? ? 'expression tag' 364 27 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B 2 1 C 2 2 C # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'light scattering' ? 2 1 'equilibrium centrifugation' ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 12_554 x,x-y,-z-1/6 0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -6.7341666667 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 5 ? ASN A 16 ? THR A 263 ASN A 274 1 ? 12 HELX_P HELX_P2 AA2 PRO A 24 ? ASN A 42 ? PRO A 282 ASN A 300 1 ? 19 HELX_P HELX_P3 AA3 ASN A 47 ? ARG A 57 ? ASN A 305 ARG A 315 1 ? 11 HELX_P HELX_P4 AA4 SER A 60 ? LYS A 64 ? SER A 318 LYS A 322 5 ? 5 HELX_P HELX_P5 AA5 PHE A 65 ? ARG A 70 ? PHE A 323 ARG A 328 1 ? 6 HELX_P HELX_P6 AA6 THR A 77 ? GLN A 93 ? THR A 335 GLN A 351 1 ? 17 HELX_P HELX_P7 AA7 THR B 5 ? ASN B 16 ? THR B 263 ASN B 274 1 ? 12 HELX_P HELX_P8 AA8 PRO B 24 ? ASN B 42 ? PRO B 282 ASN B 300 1 ? 19 HELX_P HELX_P9 AA9 ASN B 47 ? ARG B 57 ? ASN B 305 ARG B 315 1 ? 11 HELX_P HELX_P10 AB1 SER B 60 ? LYS B 64 ? SER B 318 LYS B 322 5 ? 5 HELX_P HELX_P11 AB2 PHE B 65 ? ARG B 70 ? PHE B 323 ARG B 328 1 ? 6 HELX_P HELX_P12 AB3 THR B 77 ? GLN B 92 ? THR B 335 GLN B 350 1 ? 16 HELX_P HELX_P13 AB4 THR C 5 ? ASN C 16 ? THR C 263 ASN C 274 1 ? 12 HELX_P HELX_P14 AB5 PRO C 24 ? ASN C 42 ? PRO C 282 ASN C 300 1 ? 19 HELX_P HELX_P15 AB6 ASN C 47 ? ARG C 57 ? ASN C 305 ARG C 315 1 ? 11 HELX_P HELX_P16 AB7 SER C 60 ? LYS C 64 ? SER C 318 LYS C 322 5 ? 5 HELX_P HELX_P17 AB8 PHE C 65 ? ARG C 70 ? PHE C 323 ARG C 328 1 ? 6 HELX_P HELX_P18 AB9 THR C 77 ? GLN C 92 ? THR C 335 GLN C 350 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ILE 55 C ? ? ? 1_555 A MSE 56 N ? ? A ILE 313 A MSE 314 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale2 covale both ? A MSE 56 C ? ? ? 1_555 A ARG 57 N ? ? A MSE 314 A ARG 315 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A ASN 75 C ? ? ? 1_555 A MSE 76 N ? ? A ASN 333 A MSE 334 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale4 covale both ? A MSE 76 C ? ? ? 1_555 A THR 77 N ? ? A MSE 334 A THR 335 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale5 covale both ? B ILE 55 C ? ? ? 1_555 B MSE 56 N ? ? B ILE 313 B MSE 314 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale6 covale both ? B MSE 56 C ? ? ? 1_555 B ARG 57 N ? ? B MSE 314 B ARG 315 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale7 covale both ? B ASN 75 C ? ? ? 1_555 B MSE 76 N ? ? B ASN 333 B MSE 334 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale8 covale both ? B MSE 76 C ? ? ? 1_555 B THR 77 N ? ? B MSE 334 B THR 335 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale9 covale both ? C ILE 55 C ? ? ? 1_555 C MSE 56 N ? ? C ILE 313 C MSE 314 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale10 covale both ? C MSE 56 C ? ? ? 1_555 C ARG 57 N ? ? C MSE 314 C ARG 315 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale11 covale both ? C ASN 75 C ? ? ? 1_555 C MSE 76 N ? ? C ASN 333 C MSE 334 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale12 covale both ? C MSE 76 C ? ? ? 1_555 C THR 77 N ? ? C MSE 334 C THR 335 1_555 ? ? ? ? ? ? ? 1.330 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id GLN _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 351 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -119.05 _pdbx_validate_torsion.psi 78.28 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 56 A MSE 314 ? MET 'modified residue' 2 A MSE 76 A MSE 334 ? MET 'modified residue' 3 B MSE 56 B MSE 314 ? MET 'modified residue' 4 B MSE 76 B MSE 334 ? MET 'modified residue' 5 C MSE 56 C MSE 314 ? MET 'modified residue' 6 C MSE 76 C MSE 334 ? MET 'modified residue' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 124.5922 30.4999 -18.1608 1.0721 ? 0.7413 ? 0.2269 ? -0.0624 ? 0.4478 ? 0.3594 ? 0.0334 ? -0.0197 ? 0.0104 ? 0.0515 ? -0.0097 ? 0.0174 ? -0.0134 ? -0.0827 ? 0.0328 ? 0.0094 ? 0.0531 ? 0.0973 ? 0.0024 ? -0.0324 ? -0.0674 ? 2 'X-RAY DIFFRACTION' ? refined 125.0964 14.1681 -38.6563 1.0525 ? 0.2556 ? 0.0150 ? -0.1522 ? 0.3397 ? 0.4924 ? 0.0849 ? 0.0410 ? 0.0034 ? 0.0180 ? 0.0024 ? 0.0129 ? 0.1116 ? -0.0028 ? -0.2300 ? -0.0769 ? 0.0926 ? 0.1837 ? -0.1369 ? -0.1047 ? 0.0092 ? 3 'X-RAY DIFFRACTION' ? refined 115.9011 57.8377 -13.6544 1.0239 ? 0.8844 ? -0.0939 ? 0.1512 ? 0.2742 ? 0.4736 ? 0.0235 ? 0.0224 ? 0.0052 ? 0.0523 ? -0.0158 ? 0.0123 ? 0.0256 ? 0.0140 ? -0.1157 ? -0.0297 ? 0.0222 ? 0.0268 ? -0.1281 ? -0.0330 ? -0.0178 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 261 ? ? ? A 351 ? ? ;(chain 'A' and resid 261 through 351) ; 2 'X-RAY DIFFRACTION' 2 ? ? B 261 ? ? ? B 352 ? ? ;(chain 'B' and resid 261 through 352) ; 3 'X-RAY DIFFRACTION' 3 ? ? C 261 ? ? ? C 351 ? ? ;(chain 'C' and resid 261 through 351) ; # _pdbx_entry_details.entry_id 7NLI _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 259 ? A MSE 1 2 1 Y 1 A GLN 260 ? A GLN 2 3 1 Y 1 A GLY 352 ? A GLY 94 4 1 Y 1 A SER 353 ? A SER 95 5 1 Y 1 A ARG 354 ? A ARG 96 6 1 Y 1 A ASN 355 ? A ASN 97 7 1 Y 1 A PRO 356 ? A PRO 98 8 1 Y 1 A LEU 357 ? A LEU 99 9 1 Y 1 A GLU 358 ? A GLU 100 10 1 Y 1 A HIS 359 ? A HIS 101 11 1 Y 1 A HIS 360 ? A HIS 102 12 1 Y 1 A HIS 361 ? A HIS 103 13 1 Y 1 A HIS 362 ? A HIS 104 14 1 Y 1 A HIS 363 ? A HIS 105 15 1 Y 1 A HIS 364 ? A HIS 106 16 1 Y 1 B MSE 259 ? B MSE 1 17 1 Y 1 B GLN 260 ? B GLN 2 18 1 Y 1 B SER 353 ? B SER 95 19 1 Y 1 B ARG 354 ? B ARG 96 20 1 Y 1 B ASN 355 ? B ASN 97 21 1 Y 1 B PRO 356 ? B PRO 98 22 1 Y 1 B LEU 357 ? B LEU 99 23 1 Y 1 B GLU 358 ? B GLU 100 24 1 Y 1 B HIS 359 ? B HIS 101 25 1 Y 1 B HIS 360 ? B HIS 102 26 1 Y 1 B HIS 361 ? B HIS 103 27 1 Y 1 B HIS 362 ? B HIS 104 28 1 Y 1 B HIS 363 ? B HIS 105 29 1 Y 1 B HIS 364 ? B HIS 106 30 1 Y 1 C MSE 259 ? C MSE 1 31 1 Y 1 C GLN 260 ? C GLN 2 32 1 Y 1 C GLY 352 ? C GLY 94 33 1 Y 1 C SER 353 ? C SER 95 34 1 Y 1 C ARG 354 ? C ARG 96 35 1 Y 1 C ASN 355 ? C ASN 97 36 1 Y 1 C PRO 356 ? C PRO 98 37 1 Y 1 C LEU 357 ? C LEU 99 38 1 Y 1 C GLU 358 ? C GLU 100 39 1 Y 1 C HIS 359 ? C HIS 101 40 1 Y 1 C HIS 360 ? C HIS 102 41 1 Y 1 C HIS 361 ? C HIS 103 42 1 Y 1 C HIS 362 ? C HIS 104 43 1 Y 1 C HIS 363 ? C HIS 105 44 1 Y 1 C HIS 364 ? C HIS 106 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MSE N N N N 227 MSE CA C N S 228 MSE C C N N 229 MSE O O N N 230 MSE OXT O N N 231 MSE CB C N N 232 MSE CG C N N 233 MSE SE SE N N 234 MSE CE C N N 235 MSE H H N N 236 MSE H2 H N N 237 MSE HA H N N 238 MSE HXT H N N 239 MSE HB2 H N N 240 MSE HB3 H N N 241 MSE HG2 H N N 242 MSE HG3 H N N 243 MSE HE1 H N N 244 MSE HE2 H N N 245 MSE HE3 H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TYR N N N N 318 TYR CA C N S 319 TYR C C N N 320 TYR O O N N 321 TYR CB C N N 322 TYR CG C Y N 323 TYR CD1 C Y N 324 TYR CD2 C Y N 325 TYR CE1 C Y N 326 TYR CE2 C Y N 327 TYR CZ C Y N 328 TYR OH O N N 329 TYR OXT O N N 330 TYR H H N N 331 TYR H2 H N N 332 TYR HA H N N 333 TYR HB2 H N N 334 TYR HB3 H N N 335 TYR HD1 H N N 336 TYR HD2 H N N 337 TYR HE1 H N N 338 TYR HE2 H N N 339 TYR HH H N N 340 TYR HXT H N N 341 VAL N N N N 342 VAL CA C N S 343 VAL C C N N 344 VAL O O N N 345 VAL CB C N N 346 VAL CG1 C N N 347 VAL CG2 C N N 348 VAL OXT O N N 349 VAL H H N N 350 VAL H2 H N N 351 VAL HA H N N 352 VAL HB H N N 353 VAL HG11 H N N 354 VAL HG12 H N N 355 VAL HG13 H N N 356 VAL HG21 H N N 357 VAL HG22 H N N 358 VAL HG23 H N N 359 VAL HXT H N N 360 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MSE N CA sing N N 216 MSE N H sing N N 217 MSE N H2 sing N N 218 MSE CA C sing N N 219 MSE CA CB sing N N 220 MSE CA HA sing N N 221 MSE C O doub N N 222 MSE C OXT sing N N 223 MSE OXT HXT sing N N 224 MSE CB CG sing N N 225 MSE CB HB2 sing N N 226 MSE CB HB3 sing N N 227 MSE CG SE sing N N 228 MSE CG HG2 sing N N 229 MSE CG HG3 sing N N 230 MSE SE CE sing N N 231 MSE CE HE1 sing N N 232 MSE CE HE2 sing N N 233 MSE CE HE3 sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TYR N CA sing N N 304 TYR N H sing N N 305 TYR N H2 sing N N 306 TYR CA C sing N N 307 TYR CA CB sing N N 308 TYR CA HA sing N N 309 TYR C O doub N N 310 TYR C OXT sing N N 311 TYR CB CG sing N N 312 TYR CB HB2 sing N N 313 TYR CB HB3 sing N N 314 TYR CG CD1 doub Y N 315 TYR CG CD2 sing Y N 316 TYR CD1 CE1 sing Y N 317 TYR CD1 HD1 sing N N 318 TYR CD2 CE2 doub Y N 319 TYR CD2 HD2 sing N N 320 TYR CE1 CZ doub Y N 321 TYR CE1 HE1 sing N N 322 TYR CE2 CZ sing Y N 323 TYR CE2 HE2 sing N N 324 TYR CZ OH sing N N 325 TYR OH HH sing N N 326 TYR OXT HXT sing N N 327 VAL N CA sing N N 328 VAL N H sing N N 329 VAL N H2 sing N N 330 VAL CA C sing N N 331 VAL CA CB sing N N 332 VAL CA HA sing N N 333 VAL C O doub N N 334 VAL C OXT sing N N 335 VAL CB CG1 sing N N 336 VAL CB CG2 sing N N 337 VAL CB HB sing N N 338 VAL CG1 HG11 sing N N 339 VAL CG1 HG12 sing N N 340 VAL CG1 HG13 sing N N 341 VAL CG2 HG21 sing N N 342 VAL CG2 HG22 sing N N 343 VAL CG2 HG23 sing N N 344 VAL OXT HXT sing N N 345 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Medical Research Council (MRC, United Kingdom)' 'United Kingdom' FC001178 1 'Wellcome Trust' 'United Kingdom' FC001178 2 'Cancer Research UK' 'United Kingdom' FC001178 3 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type other _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.details 'Ty1 p22' # _atom_sites.entry_id 7NLI _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.003560 _atom_sites.fract_transf_matrix[1][2] 0.002055 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.004111 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024749 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S SE # loop_