data_7Q4L # _entry.id 7Q4L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.361 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7Q4L pdb_00007q4l 10.2210/pdb7q4l/pdb WWPDB D_1292118884 ? ? BMRB 34675 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'The solution structure of hsDND1 RRM12 bound to CUUAUUUG RNA' _pdbx_database_related.db_id 34675 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 7Q4L _pdbx_database_status.recvd_initial_deposition_date 2021-10-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Duszczyk, M.M.' 1 0000-0002-9440-1061 'Allain, F.H.T.' 2 0000-0002-2131-6237 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 13 _citation.language ? _citation.page_first 5892 _citation.page_last 5892 _citation.title ;The solution structure of Dead End bound to AU-rich RNA reveals an unusual mode of tandem RRM-RNA recognition required for mRNA regulation. ; _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-022-33552-x _citation.pdbx_database_id_PubMed 36202814 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Duszczyk, M.M.' 1 ? primary 'Wischnewski, H.' 2 ? primary 'Kazeeva, T.' 3 ? primary 'Arora, R.' 4 0000-0001-9396-3671 primary 'Loughlin, F.E.' 5 0000-0002-5754-4207 primary 'von Schroetter, C.' 6 ? primary 'Pradere, U.' 7 ? primary 'Hall, J.' 8 0000-0003-4160-7135 primary 'Ciaudo, C.' 9 0000-0002-0857-4506 primary 'Allain, F.H.' 10 0000-0002-2131-6237 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7Q4L _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.000 _cell.length_a_esd ? _cell.length_b 1.000 _cell.length_b_esd ? _cell.length_c 1.000 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Q4L _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Dead end protein homolog 1' 24927.939 1 ? ? ? ? 2 polymer syn ;RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3') ; 2465.465 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RNA-binding motif,single-stranded-interacting protein 4' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GAMERVNPENKAALEAWVRETGIRLVQVNGQRKYGGPPPGWVGSPPPAGSEVFIGRLPQDVYEHQLIPLFQRVGRLYEFR LMMTFSGLNRGFAYARYSSRRGAQAAIATLHNHPLRPSCPLLVCRSTEKCELSVDGLPPNLTRSALLLALQPLGPGLQEA RLLPSPGPAPGQIALLKFSSHRAAAMAKKALVEGQSHLCGEQVAVEWLKPDLKQRLRQQLVGPFLRS ; ;GAMERVNPENKAALEAWVRETGIRLVQVNGQRKYGGPPPGWVGSPPPAGSEVFIGRLPQDVYEHQLIPLFQRVGRLYEFR LMMTFSGLNRGFAYARYSSRRGAQAAIATLHNHPLRPSCPLLVCRSTEKCELSVDGLPPNLTRSALLLALQPLGPGLQEA RLLPSPGPAPGQIALLKFSSHRAAAMAKKALVEGQSHLCGEQVAVEWLKPDLKQRLRQQLVGPFLRS ; A ? 2 polyribonucleotide no no CUUAUUUG CUUAUUUG B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 GLU n 1 5 ARG n 1 6 VAL n 1 7 ASN n 1 8 PRO n 1 9 GLU n 1 10 ASN n 1 11 LYS n 1 12 ALA n 1 13 ALA n 1 14 LEU n 1 15 GLU n 1 16 ALA n 1 17 TRP n 1 18 VAL n 1 19 ARG n 1 20 GLU n 1 21 THR n 1 22 GLY n 1 23 ILE n 1 24 ARG n 1 25 LEU n 1 26 VAL n 1 27 GLN n 1 28 VAL n 1 29 ASN n 1 30 GLY n 1 31 GLN n 1 32 ARG n 1 33 LYS n 1 34 TYR n 1 35 GLY n 1 36 GLY n 1 37 PRO n 1 38 PRO n 1 39 PRO n 1 40 GLY n 1 41 TRP n 1 42 VAL n 1 43 GLY n 1 44 SER n 1 45 PRO n 1 46 PRO n 1 47 PRO n 1 48 ALA n 1 49 GLY n 1 50 SER n 1 51 GLU n 1 52 VAL n 1 53 PHE n 1 54 ILE n 1 55 GLY n 1 56 ARG n 1 57 LEU n 1 58 PRO n 1 59 GLN n 1 60 ASP n 1 61 VAL n 1 62 TYR n 1 63 GLU n 1 64 HIS n 1 65 GLN n 1 66 LEU n 1 67 ILE n 1 68 PRO n 1 69 LEU n 1 70 PHE n 1 71 GLN n 1 72 ARG n 1 73 VAL n 1 74 GLY n 1 75 ARG n 1 76 LEU n 1 77 TYR n 1 78 GLU n 1 79 PHE n 1 80 ARG n 1 81 LEU n 1 82 MET n 1 83 MET n 1 84 THR n 1 85 PHE n 1 86 SER n 1 87 GLY n 1 88 LEU n 1 89 ASN n 1 90 ARG n 1 91 GLY n 1 92 PHE n 1 93 ALA n 1 94 TYR n 1 95 ALA n 1 96 ARG n 1 97 TYR n 1 98 SER n 1 99 SER n 1 100 ARG n 1 101 ARG n 1 102 GLY n 1 103 ALA n 1 104 GLN n 1 105 ALA n 1 106 ALA n 1 107 ILE n 1 108 ALA n 1 109 THR n 1 110 LEU n 1 111 HIS n 1 112 ASN n 1 113 HIS n 1 114 PRO n 1 115 LEU n 1 116 ARG n 1 117 PRO n 1 118 SER n 1 119 CYS n 1 120 PRO n 1 121 LEU n 1 122 LEU n 1 123 VAL n 1 124 CYS n 1 125 ARG n 1 126 SER n 1 127 THR n 1 128 GLU n 1 129 LYS n 1 130 CYS n 1 131 GLU n 1 132 LEU n 1 133 SER n 1 134 VAL n 1 135 ASP n 1 136 GLY n 1 137 LEU n 1 138 PRO n 1 139 PRO n 1 140 ASN n 1 141 LEU n 1 142 THR n 1 143 ARG n 1 144 SER n 1 145 ALA n 1 146 LEU n 1 147 LEU n 1 148 LEU n 1 149 ALA n 1 150 LEU n 1 151 GLN n 1 152 PRO n 1 153 LEU n 1 154 GLY n 1 155 PRO n 1 156 GLY n 1 157 LEU n 1 158 GLN n 1 159 GLU n 1 160 ALA n 1 161 ARG n 1 162 LEU n 1 163 LEU n 1 164 PRO n 1 165 SER n 1 166 PRO n 1 167 GLY n 1 168 PRO n 1 169 ALA n 1 170 PRO n 1 171 GLY n 1 172 GLN n 1 173 ILE n 1 174 ALA n 1 175 LEU n 1 176 LEU n 1 177 LYS n 1 178 PHE n 1 179 SER n 1 180 SER n 1 181 HIS n 1 182 ARG n 1 183 ALA n 1 184 ALA n 1 185 ALA n 1 186 MET n 1 187 ALA n 1 188 LYS n 1 189 LYS n 1 190 ALA n 1 191 LEU n 1 192 VAL n 1 193 GLU n 1 194 GLY n 1 195 GLN n 1 196 SER n 1 197 HIS n 1 198 LEU n 1 199 CYS n 1 200 GLY n 1 201 GLU n 1 202 GLN n 1 203 VAL n 1 204 ALA n 1 205 VAL n 1 206 GLU n 1 207 TRP n 1 208 LEU n 1 209 LYS n 1 210 PRO n 1 211 ASP n 1 212 LEU n 1 213 LYS n 1 214 GLN n 1 215 ARG n 1 216 LEU n 1 217 ARG n 1 218 GLN n 1 219 GLN n 1 220 LEU n 1 221 VAL n 1 222 GLY n 1 223 PRO n 1 224 PHE n 1 225 LEU n 1 226 ARG n 1 227 SER n 2 1 C n 2 2 U n 2 3 U n 2 4 A n 2 5 U n 2 6 U n 2 7 U n 2 8 G n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 227 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'DND1, RBMS4' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 8 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name Human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP DND1_HUMAN Q8IYX4 ? 1 ;ERVNPENKAALEAWVRETGIRLVQVNGQRKYGGPPPGWVGSPPPAGSEVFIGRLPQDVYEHQLIPLFQRVGRLYEFRLMM TFSGLNRGFAYARYSSRRGAQAAIATLHNHPLRPSCPLLVCRSTEKCELSVDGLPPNLTRSALLLALQPLGPGLQEARLL PSPGPAPGQIALLKFSSHRAAAMAKKALVEGQSHLCGEQVAVEWLKPDLKQRLRQQLVGPFLRS ; 12 2 PDB 7Q4L 7Q4L ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7Q4L A 4 ? 227 ? Q8IYX4 12 ? 235 ? 12 235 2 2 7Q4L B 1 ? 8 ? 7Q4L 1 ? 8 ? 1 8 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7Q4L GLY A 1 ? UNP Q8IYX4 ? ? 'expression tag' 9 1 1 7Q4L ALA A 2 ? UNP Q8IYX4 ? ? 'expression tag' 10 2 1 7Q4L MET A 3 ? UNP Q8IYX4 ? ? 'expression tag' 11 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 2 '2D 1H-15N HSQC' 3 isotropic 2 1 5 '2D 1H-13C HSQC' 3 isotropic 3 1 2 '3D 1H-15N NOESY' 3 isotropic 4 1 1 '3D HNCO TROSY' 2 isotropic 5 1 1 '3D HN(CA)CO TROSY' 2 isotropic 6 1 5 '3D 1H-15N NOESY' 3 isotropic 7 1 1 '3D HN(CO)CACB TROSY' 2 isotropic 8 1 1 '3D HNCACB TROSY' 2 isotropic 9 1 1 '3D HN(CO)CA TROSY' 2 isotropic 10 1 1 '3D HNCA TROSY' 2 isotropic 11 1 2 '2D 1H-13C HSQC' 3 isotropic 12 1 5 '2D F1 filtered, F2 filtered NOESY' 3 isotropic 13 1 5 '2D F2 filtered NOESY' 3 isotropic 14 1 3 '2D NOESY' 3 isotropic 15 1 3 '2D TOCSY' 1 isotropic 16 1 5 '3D HCCH-COSY' 1 isotropic 17 1 5 '3D HCCH-TOCSY' 1 isotropic 18 1 5 '3D HCCH-TOCSY' 1 isotropic 19 1 5 '3D 1H-13C-HSQC-aromatic-NOESY' 3 isotropic 20 1 5 '3D 1H-13C-HMQC-NOESY' 3 isotropic 21 1 6 '2D 1H-13C HSQC' 3 isotropic 22 1 4 '2D 1H-13C HSQC' 3 isotropic 23 1 8 '2D F2 filtered NOESY' 3 isotropic 24 1 7 '2D F2 filtered NOESY' 3 isotropic 25 1 8 '2D F1 filtered, F2 filtered NOESY' 3 isotropic 26 1 7 '2D F1 filtered, F2 filtered NOESY' 3 isotropic 27 1 3 '2D 1H-1H TOCSY' 3 isotropic 28 1 5 '3D F3 filtered, F2 edited 13C HMQC-NOESY' 3 isotropic 29 1 5 '2D 13C F2 filtered 2D NOESY' 3 isotropic 30 1 5 '2D 13C F1 filtered, F2 filtered NOESY' 3 isotropic 31 1 9 '2D 1H-15N TROSY' 2 anisotropic 32 1 11 '2D 1H-15N TROSY' 2 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure AMBIENT _pdbx_nmr_exptl_sample_conditions.pH 6.6 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label conditions_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 ;0.8 mM fractionally deuterated, 13C,15N-labeled hsDnd1 RRM12, 0.9 mM RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3'), 100 mM KHPO4/ KH2PO4 pH 6.6, 1 mM DTT, 95% H2O/5% D2O ; '95% H2O/5% D2O' 13C15NfracdeutRRM12-CUUAUUUG solution ? 2 ;0.8 mM 13C,15N-labeled hsDnd1 RRM12, 0.9 mM RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3'), 100 mM KHPO4/ KH2PO4 pH 6.6, 1 mM DTT, 95% H2O/5% D2O ; '95% H2O/5% D2O' 13C15NRRM12-CUUAUUUG_H2O solution ? 3 ;0.8 mM hsDnd1 RRM12, 0.8 mM RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3'), 100 mM KHPO4/ KH2PO4 pH 6.6, 1 mM DTT, 100% D2O ; '100% D2O' RRM12-CUUAUUUG solution ? 4 ;0.8 mM hsDnd1 RRM12, 0.8 mM selectively 13C ribose-labeled C*UU*AU*UU*G RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3'), 100 mM KHPO4/ KH2PO4 pH 6.6, 1 mM DTT, 100% D2O ; '100% D2O' RRM12-C*UU*AU*UU*G solution ? 5 ;0.8 mM 13C,15N-labeled hsDnd1 RRM12, 0.9 mM RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3'), 100 mM KHPO4/ KH2PO4 pH 6.6, 1 mM DTT, 100% D2O ; '100% D2O' 13C15NRRM12-CUUAUUUG_D2O solution ? 6 ;0.8 mM hsDnd1 RRM12, 0.8 mM selectively 13C ribose-labeled CU*UA*UU*UG* RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3'), 100 mM KHPO4/ KH2PO4 pH 6.6, 1 mM DTT, 100% D2O ; '100% D2O' RRM12-CU*UA*UU*UG* solution ? 7 ;0.8 mM 13C15N hsDnd1 RRM12, 0.8 mM selectively 13C ribose-labeled C*UU*AU*UU*G RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3'), 100 mM KHPO4/ KH2PO4 pH 6.6, 1 mM DTT, 100% D2O ; '100% D2O' 13C15NRRM12-C*UU*AU*UU*G solution ? 8 ;0.8 mM 13C15N hsDnd1 RRM12, 0.8 mM selectively 13C ribose-labeled CU*UA*UU*UG* RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3'), 100 mM KHPO4/ KH2PO4 pH 6.6, 1 mM DTT, 100% D2O ; '100% D2O' 13C15NRRM12-CU*UA*UU*UG* solution ? 9 ;0.8 mM 13C,15N-labeled hsDnd1 RRM12, 0.9 mM RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3'), 100 mM KHPO4/ KH2PO4 pH 6.6, 1 mM DTT, 4.2 % C12E5 polyethylene glycol / hexanol, 95% H2O/5% D2O ; '95% H2O/5% D2O' 15NRRM12-CUUAUUUG_H2O_aniso solution ? 11 ;0.8 mM 13C,15N-labeled hsDnd1 RRM12, 0.9 mM RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3'), 100 mM KHPO4/ KH2PO4 pH 6.6, 1 mM DTT, 95% H2O/5% D2O ; '95% H2O/5% D2O' 15NRRM12-CUUAUUUG_H2O_iso solution ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 'AVANCE III' ? Bruker 600 ? 2 'AVANCE III' ? Bruker 700 ? 3 AVANCE ? Bruker 900 ? # _pdbx_nmr_refine.entry_id 7Q4L _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 5 # _pdbx_nmr_ensemble.entry_id 7Q4L _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations and lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 7Q4L _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'fewest violations' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 collection TopSpin 2.1 'Bruker Biospin' 2 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 3 'data analysis' NMRFAM-SPARKY 1.1412 'Lee W, Tonelli M, Markley JL' 4 'structure calculation' CYANA 3.98 'Guntert, Mumenthaler and Wuthrich' 5 'structure calculation' Amber 12 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 6 'peak picking' ATNOS 3.1 ATNOS-CANDID 7 'chemical shift assignment' Sparky ? Goddard 8 refinement Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, and Kollman' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7Q4L _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 7Q4L _struct.title 'The solution structure of hsDND1 RRM12 bound to CUUAUUUG RNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7Q4L _struct_keywords.text ;Protein-RNA complex, post-transcriptional gene regulation, PTGR, germ line differentiation, AU-rich RNA binding protein, RNA BINDING PROTEIN ; _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 8 ? GLY A 22 ? PRO A 16 GLY A 30 1 ? 15 HELX_P HELX_P2 AA2 TYR A 62 ? GLY A 74 ? TYR A 70 GLY A 82 1 ? 13 HELX_P HELX_P3 AA3 SER A 99 ? HIS A 111 ? SER A 107 HIS A 119 1 ? 13 HELX_P HELX_P4 AA4 THR A 142 ? GLN A 151 ? THR A 150 GLN A 159 1 ? 10 HELX_P HELX_P5 AA5 SER A 180 ? GLY A 194 ? SER A 188 GLY A 202 1 ? 15 HELX_P HELX_P6 AA6 HIS A 197 ? GLU A 201 ? HIS A 205 GLU A 209 5 ? 5 HELX_P HELX_P7 AA7 LYS A 209 ? LEU A 225 ? LYS A 217 LEU A 233 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 167 A . ? GLY 175 A PRO 168 A ? PRO 176 A 1 -4.60 2 GLY 167 A . ? GLY 175 A PRO 168 A ? PRO 176 A 2 -4.39 3 GLY 167 A . ? GLY 175 A PRO 168 A ? PRO 176 A 3 -1.34 4 GLY 167 A . ? GLY 175 A PRO 168 A ? PRO 176 A 4 -6.32 5 GLY 167 A . ? GLY 175 A PRO 168 A ? PRO 176 A 5 -4.36 6 GLY 167 A . ? GLY 175 A PRO 168 A ? PRO 176 A 6 -4.87 7 GLY 167 A . ? GLY 175 A PRO 168 A ? PRO 176 A 7 0.74 8 GLY 167 A . ? GLY 175 A PRO 168 A ? PRO 176 A 8 -4.37 9 GLY 167 A . ? GLY 175 A PRO 168 A ? PRO 176 A 9 -2.69 10 GLY 167 A . ? GLY 175 A PRO 168 A ? PRO 176 A 10 -1.83 11 GLY 167 A . ? GLY 175 A PRO 168 A ? PRO 176 A 11 -4.38 12 GLY 167 A . ? GLY 175 A PRO 168 A ? PRO 176 A 12 -2.44 13 GLY 167 A . ? GLY 175 A PRO 168 A ? PRO 176 A 13 -0.54 14 GLY 167 A . ? GLY 175 A PRO 168 A ? PRO 176 A 14 -4.86 15 GLY 167 A . ? GLY 175 A PRO 168 A ? PRO 176 A 15 -7.30 16 GLY 167 A . ? GLY 175 A PRO 168 A ? PRO 176 A 16 -2.52 17 GLY 167 A . ? GLY 175 A PRO 168 A ? PRO 176 A 17 -1.63 18 GLY 167 A . ? GLY 175 A PRO 168 A ? PRO 176 A 18 -5.49 19 GLY 167 A . ? GLY 175 A PRO 168 A ? PRO 176 A 19 -2.64 20 GLY 167 A . ? GLY 175 A PRO 168 A ? PRO 176 A 20 -5.81 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 26 ? VAL A 28 ? VAL A 34 VAL A 36 AA1 2 GLN A 31 ? TYR A 34 ? GLN A 39 TYR A 42 AA1 3 LEU A 76 ? MET A 82 ? LEU A 84 MET A 90 AA1 4 PHE A 92 ? TYR A 97 ? PHE A 100 TYR A 105 AA1 5 GLU A 51 ? GLY A 55 ? GLU A 59 GLY A 63 AA1 6 LEU A 122 ? ARG A 125 ? LEU A 130 ARG A 133 AA2 1 LEU A 157 ? LEU A 162 ? LEU A 165 LEU A 170 AA2 2 ALA A 174 ? PHE A 178 ? ALA A 182 PHE A 186 AA2 3 GLU A 131 ? ASP A 135 ? GLU A 139 ASP A 143 AA2 4 ALA A 204 ? TRP A 207 ? ALA A 212 TRP A 215 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 28 ? N VAL A 36 O GLN A 31 ? O GLN A 39 AA1 2 3 N ARG A 32 ? N ARG A 40 O LEU A 81 ? O LEU A 89 AA1 3 4 N TYR A 77 ? N TYR A 85 O ARG A 96 ? O ARG A 104 AA1 4 5 O ALA A 95 ? O ALA A 103 N VAL A 52 ? N VAL A 60 AA1 5 6 N GLY A 55 ? N GLY A 63 O LEU A 122 ? O LEU A 130 AA2 1 2 N GLU A 159 ? N GLU A 167 O LYS A 177 ? O LYS A 185 AA2 2 3 O LEU A 176 ? O LEU A 184 N LEU A 132 ? N LEU A 140 AA2 3 4 N SER A 133 ? N SER A 141 O GLU A 206 ? O GLU A 214 # _database_PDB_matrix.entry_id 7Q4L _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 7Q4L _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 9 9 GLY NGL A . n A 1 2 ALA 2 10 10 ALA ALA A . n A 1 3 MET 3 11 11 MET MET A . n A 1 4 GLU 4 12 12 GLU GLU A . n A 1 5 ARG 5 13 13 ARG ARG A . n A 1 6 VAL 6 14 14 VAL VAL A . n A 1 7 ASN 7 15 15 ASN ASN A . n A 1 8 PRO 8 16 16 PRO PRO A . n A 1 9 GLU 9 17 17 GLU GLU A . n A 1 10 ASN 10 18 18 ASN ASN A . n A 1 11 LYS 11 19 19 LYS LYS A . n A 1 12 ALA 12 20 20 ALA ALA A . n A 1 13 ALA 13 21 21 ALA ALA A . n A 1 14 LEU 14 22 22 LEU LEU A . n A 1 15 GLU 15 23 23 GLU GLU A . n A 1 16 ALA 16 24 24 ALA ALA A . n A 1 17 TRP 17 25 25 TRP TRP A . n A 1 18 VAL 18 26 26 VAL VAL A . n A 1 19 ARG 19 27 27 ARG ARG A . n A 1 20 GLU 20 28 28 GLU GLU A . n A 1 21 THR 21 29 29 THR THR A . n A 1 22 GLY 22 30 30 GLY GLY A . n A 1 23 ILE 23 31 31 ILE ILE A . n A 1 24 ARG 24 32 32 ARG ARG A . n A 1 25 LEU 25 33 33 LEU LEU A . n A 1 26 VAL 26 34 34 VAL VAL A . n A 1 27 GLN 27 35 35 GLN GLN A . n A 1 28 VAL 28 36 36 VAL VAL A . n A 1 29 ASN 29 37 37 ASN ASN A . n A 1 30 GLY 30 38 38 GLY GLY A . n A 1 31 GLN 31 39 39 GLN GLN A . n A 1 32 ARG 32 40 40 ARG ARG A . n A 1 33 LYS 33 41 41 LYS LYS A . n A 1 34 TYR 34 42 42 TYR TYR A . n A 1 35 GLY 35 43 43 GLY GLY A . n A 1 36 GLY 36 44 44 GLY GLY A . n A 1 37 PRO 37 45 45 PRO PRO A . n A 1 38 PRO 38 46 46 PRO PRO A . n A 1 39 PRO 39 47 47 PRO PRO A . n A 1 40 GLY 40 48 48 GLY GLY A . n A 1 41 TRP 41 49 49 TRP TRP A . n A 1 42 VAL 42 50 50 VAL VAL A . n A 1 43 GLY 43 51 51 GLY GLY A . n A 1 44 SER 44 52 52 SER SER A . n A 1 45 PRO 45 53 53 PRO PRO A . n A 1 46 PRO 46 54 54 PRO PRO A . n A 1 47 PRO 47 55 55 PRO PRO A . n A 1 48 ALA 48 56 56 ALA ALA A . n A 1 49 GLY 49 57 57 GLY GLY A . n A 1 50 SER 50 58 58 SER SER A . n A 1 51 GLU 51 59 59 GLU GLU A . n A 1 52 VAL 52 60 60 VAL VAL A . n A 1 53 PHE 53 61 61 PHE PHE A . n A 1 54 ILE 54 62 62 ILE ILE A . n A 1 55 GLY 55 63 63 GLY GLY A . n A 1 56 ARG 56 64 64 ARG ARG A . n A 1 57 LEU 57 65 65 LEU LEU A . n A 1 58 PRO 58 66 66 PRO PRO A . n A 1 59 GLN 59 67 67 GLN GLN A . n A 1 60 ASP 60 68 68 ASP ASP A . n A 1 61 VAL 61 69 69 VAL VAL A . n A 1 62 TYR 62 70 70 TYR TYR A . n A 1 63 GLU 63 71 71 GLU GLU A . n A 1 64 HIS 64 72 72 HIS HIS A . n A 1 65 GLN 65 73 73 GLN GLN A . n A 1 66 LEU 66 74 74 LEU LEU A . n A 1 67 ILE 67 75 75 ILE ILE A . n A 1 68 PRO 68 76 76 PRO PRO A . n A 1 69 LEU 69 77 77 LEU LEU A . n A 1 70 PHE 70 78 78 PHE PHE A . n A 1 71 GLN 71 79 79 GLN GLN A . n A 1 72 ARG 72 80 80 ARG ARG A . n A 1 73 VAL 73 81 81 VAL VAL A . n A 1 74 GLY 74 82 82 GLY GLY A . n A 1 75 ARG 75 83 83 ARG ARG A . n A 1 76 LEU 76 84 84 LEU LEU A . n A 1 77 TYR 77 85 85 TYR TYR A . n A 1 78 GLU 78 86 86 GLU GLU A . n A 1 79 PHE 79 87 87 PHE PHE A . n A 1 80 ARG 80 88 88 ARG ARG A . n A 1 81 LEU 81 89 89 LEU LEU A . n A 1 82 MET 82 90 90 MET MET A . n A 1 83 MET 83 91 91 MET MET A . n A 1 84 THR 84 92 92 THR THR A . n A 1 85 PHE 85 93 93 PHE PHE A . n A 1 86 SER 86 94 94 SER SER A . n A 1 87 GLY 87 95 95 GLY GLY A . n A 1 88 LEU 88 96 96 LEU LEU A . n A 1 89 ASN 89 97 97 ASN ASN A . n A 1 90 ARG 90 98 98 ARG ARG A . n A 1 91 GLY 91 99 99 GLY GLY A . n A 1 92 PHE 92 100 100 PHE PHE A . n A 1 93 ALA 93 101 101 ALA ALA A . n A 1 94 TYR 94 102 102 TYR TYR A . n A 1 95 ALA 95 103 103 ALA ALA A . n A 1 96 ARG 96 104 104 ARG ARG A . n A 1 97 TYR 97 105 105 TYR TYR A . n A 1 98 SER 98 106 106 SER SER A . n A 1 99 SER 99 107 107 SER SER A . n A 1 100 ARG 100 108 108 ARG ARG A . n A 1 101 ARG 101 109 109 ARG ARG A . n A 1 102 GLY 102 110 110 GLY GLY A . n A 1 103 ALA 103 111 111 ALA ALA A . n A 1 104 GLN 104 112 112 GLN GLN A . n A 1 105 ALA 105 113 113 ALA ALA A . n A 1 106 ALA 106 114 114 ALA ALA A . n A 1 107 ILE 107 115 115 ILE ILE A . n A 1 108 ALA 108 116 116 ALA ALA A . n A 1 109 THR 109 117 117 THR THR A . n A 1 110 LEU 110 118 118 LEU LEU A . n A 1 111 HIS 111 119 119 HIS HIS A . n A 1 112 ASN 112 120 120 ASN ASN A . n A 1 113 HIS 113 121 121 HIS HIS A . n A 1 114 PRO 114 122 122 PRO PRO A . n A 1 115 LEU 115 123 123 LEU LEU A . n A 1 116 ARG 116 124 124 ARG ARG A . n A 1 117 PRO 117 125 125 PRO PRO A . n A 1 118 SER 118 126 126 SER SER A . n A 1 119 CYS 119 127 127 CYS CYS A . n A 1 120 PRO 120 128 128 PRO PRO A . n A 1 121 LEU 121 129 129 LEU LEU A . n A 1 122 LEU 122 130 130 LEU LEU A . n A 1 123 VAL 123 131 131 VAL VAL A . n A 1 124 CYS 124 132 132 CYS CYS A . n A 1 125 ARG 125 133 133 ARG ARG A . n A 1 126 SER 126 134 134 SER SER A . n A 1 127 THR 127 135 135 THR THR A . n A 1 128 GLU 128 136 136 GLU GLU A . n A 1 129 LYS 129 137 137 LYS LYS A . n A 1 130 CYS 130 138 138 CYS CYS A . n A 1 131 GLU 131 139 139 GLU GLU A . n A 1 132 LEU 132 140 140 LEU LEU A . n A 1 133 SER 133 141 141 SER SER A . n A 1 134 VAL 134 142 142 VAL VAL A . n A 1 135 ASP 135 143 143 ASP ASP A . n A 1 136 GLY 136 144 144 GLY GLY A . n A 1 137 LEU 137 145 145 LEU LEU A . n A 1 138 PRO 138 146 146 PRO PRO A . n A 1 139 PRO 139 147 147 PRO PRO A . n A 1 140 ASN 140 148 148 ASN ASN A . n A 1 141 LEU 141 149 149 LEU LEU A . n A 1 142 THR 142 150 150 THR THR A . n A 1 143 ARG 143 151 151 ARG ARG A . n A 1 144 SER 144 152 152 SER SER A . n A 1 145 ALA 145 153 153 ALA ALA A . n A 1 146 LEU 146 154 154 LEU LEU A . n A 1 147 LEU 147 155 155 LEU LEU A . n A 1 148 LEU 148 156 156 LEU LEU A . n A 1 149 ALA 149 157 157 ALA ALA A . n A 1 150 LEU 150 158 158 LEU LEU A . n A 1 151 GLN 151 159 159 GLN GLN A . n A 1 152 PRO 152 160 160 PRO PRO A . n A 1 153 LEU 153 161 161 LEU LEU A . n A 1 154 GLY 154 162 162 GLY GLY A . n A 1 155 PRO 155 163 163 PRO PRO A . n A 1 156 GLY 156 164 164 GLY GLY A . n A 1 157 LEU 157 165 165 LEU LEU A . n A 1 158 GLN 158 166 166 GLN GLN A . n A 1 159 GLU 159 167 167 GLU GLU A . n A 1 160 ALA 160 168 168 ALA ALA A . n A 1 161 ARG 161 169 169 ARG ARG A . n A 1 162 LEU 162 170 170 LEU LEU A . n A 1 163 LEU 163 171 171 LEU LEU A . n A 1 164 PRO 164 172 172 PRO PRO A . n A 1 165 SER 165 173 173 SER SER A . n A 1 166 PRO 166 174 174 PRO PRO A . n A 1 167 GLY 167 175 175 GLY GLY A . n A 1 168 PRO 168 176 176 PRO PRO A . n A 1 169 ALA 169 177 177 ALA ALA A . n A 1 170 PRO 170 178 178 PRO PRO A . n A 1 171 GLY 171 179 179 GLY GLY A . n A 1 172 GLN 172 180 180 GLN GLN A . n A 1 173 ILE 173 181 181 ILE ILE A . n A 1 174 ALA 174 182 182 ALA ALA A . n A 1 175 LEU 175 183 183 LEU LEU A . n A 1 176 LEU 176 184 184 LEU LEU A . n A 1 177 LYS 177 185 185 LYS LYS A . n A 1 178 PHE 178 186 186 PHE PHE A . n A 1 179 SER 179 187 187 SER SER A . n A 1 180 SER 180 188 188 SER SER A . n A 1 181 HIS 181 189 189 HIS HIS A . n A 1 182 ARG 182 190 190 ARG ARG A . n A 1 183 ALA 183 191 191 ALA ALA A . n A 1 184 ALA 184 192 192 ALA ALA A . n A 1 185 ALA 185 193 193 ALA ALA A . n A 1 186 MET 186 194 194 MET MET A . n A 1 187 ALA 187 195 195 ALA ALA A . n A 1 188 LYS 188 196 196 LYS LYS A . n A 1 189 LYS 189 197 197 LYS LYS A . n A 1 190 ALA 190 198 198 ALA ALA A . n A 1 191 LEU 191 199 199 LEU LEU A . n A 1 192 VAL 192 200 200 VAL VAL A . n A 1 193 GLU 193 201 201 GLU GLU A . n A 1 194 GLY 194 202 202 GLY GLY A . n A 1 195 GLN 195 203 203 GLN GLN A . n A 1 196 SER 196 204 204 SER SER A . n A 1 197 HIS 197 205 205 HIS HIS A . n A 1 198 LEU 198 206 206 LEU LEU A . n A 1 199 CYS 199 207 207 CYS CYS A . n A 1 200 GLY 200 208 208 GLY GLY A . n A 1 201 GLU 201 209 209 GLU GLU A . n A 1 202 GLN 202 210 210 GLN GLN A . n A 1 203 VAL 203 211 211 VAL VAL A . n A 1 204 ALA 204 212 212 ALA ALA A . n A 1 205 VAL 205 213 213 VAL VAL A . n A 1 206 GLU 206 214 214 GLU GLU A . n A 1 207 TRP 207 215 215 TRP TRP A . n A 1 208 LEU 208 216 216 LEU LEU A . n A 1 209 LYS 209 217 217 LYS LYS A . n A 1 210 PRO 210 218 218 PRO PRO A . n A 1 211 ASP 211 219 219 ASP ASP A . n A 1 212 LEU 212 220 220 LEU LEU A . n A 1 213 LYS 213 221 221 LYS LYS A . n A 1 214 GLN 214 222 222 GLN GLN A . n A 1 215 ARG 215 223 223 ARG ARG A . n A 1 216 LEU 216 224 224 LEU LEU A . n A 1 217 ARG 217 225 225 ARG ARG A . n A 1 218 GLN 218 226 226 GLN GLN A . n A 1 219 GLN 219 227 227 GLN GLN A . n A 1 220 LEU 220 228 228 LEU LEU A . n A 1 221 VAL 221 229 229 VAL VAL A . n A 1 222 GLY 222 230 230 GLY GLY A . n A 1 223 PRO 223 231 231 PRO PRO A . n A 1 224 PHE 224 232 232 PHE PHE A . n A 1 225 LEU 225 233 233 LEU LEU A . n A 1 226 ARG 226 234 234 ARG ARG A . n A 1 227 SER 227 235 235 SER SER A . n B 2 1 C 1 1 1 C C B . n B 2 2 U 2 2 2 U U B . n B 2 3 U 3 3 3 U U B . n B 2 4 A 4 4 4 A A B . n B 2 5 U 5 5 5 U U B . n B 2 6 U 6 6 6 U U B . n B 2 7 U 7 7 7 U U B . n B 2 8 G 8 8 8 G G B . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email allain@bc.biol.ethz.ch _pdbx_contact_author.name_first Frederic _pdbx_contact_author.name_last Allain _pdbx_contact_author.name_mi HT _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-2131-6237 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-05-04 2 'Structure model' 1 1 2022-10-19 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_citation_author.identifier_ORCID' 13 2 'Structure model' '_citation_author.name' # _pdbx_entry_details.entry_id 7Q4L _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'hsDnd1 RRM12' 0.8 ? mM 'fractionally deuterated, 13C,15N-labeled' 1 ;RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3') ; 0.9 ? mM none 1 'KHPO4/ KH2PO4 pH 6.6' 100 ? mM none 1 DTT 1 ? mM none 2 'hsDnd1 RRM12' 0.8 ? mM 13C,15N-labeled 2 ;RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3') ; 0.9 ? mM none 2 'KHPO4/ KH2PO4 pH 6.6' 100 ? mM none 2 DTT 1 ? mM none 3 'hsDnd1 RRM12' 0.8 ? mM none 3 ;RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3') ; 0.8 ? mM none 3 'KHPO4/ KH2PO4 pH 6.6' 100 ? mM none 3 DTT 1 ? mM none 4 'hsDnd1 RRM12' 0.8 ? mM none 4 ;RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3') ; 0.8 ? mM 'selectively 13C ribose-labeled C*UU*AU*UU*G' 4 'KHPO4/ KH2PO4 pH 6.6' 100 ? mM none 4 DTT 1 ? mM none 5 'hsDnd1 RRM12' 0.8 ? mM 13C,15N-labeled 5 ;RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3') ; 0.9 ? mM none 5 'KHPO4/ KH2PO4 pH 6.6' 100 ? mM none 5 DTT 1 ? mM none 6 'hsDnd1 RRM12' 0.8 ? mM none 6 ;RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3') ; 0.8 ? mM 'selectively 13C ribose-labeled CU*UA*UU*UG*' 6 'KHPO4/ KH2PO4 pH 6.6' 100 ? mM none 6 DTT 1 ? mM none 7 'hsDnd1 RRM12' 0.8 ? mM 13C15N 7 ;RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3') ; 0.8 ? mM 'selectively 13C ribose-labeled C*UU*AU*UU*G' 7 'KHPO4/ KH2PO4 pH 6.6' 100 ? mM none 7 DTT 1 ? mM none 8 'hsDnd1 RRM12' 0.8 ? mM 13C15N 8 ;RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3') ; 0.8 ? mM 'selectively 13C ribose-labeled CU*UA*UU*UG*' 8 'KHPO4/ KH2PO4 pH 6.6' 100 ? mM none 8 DTT 1 ? mM none 9 'hsDnd1 RRM12' 0.8 ? mM 13C,15N-labeled 9 ;RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3') ; 0.9 ? mM none 9 'KHPO4/ KH2PO4 pH 6.6' 100 ? mM none 9 DTT 1 ? mM none 9 'C12E5 polyethylene glycol / hexanol' 4.2 ? % none 11 'hsDnd1 RRM12' 0.8 ? mM 13C,15N-labeled 11 ;RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3') ; 0.9 ? mM none 11 'KHPO4/ KH2PO4 pH 6.6' 100 ? mM none 11 DTT 1 ? mM none # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 "HO2'" B U 5 ? ? OP1 B U 6 ? ? 1.52 2 3 "HO2'" B U 5 ? ? OP1 B U 6 ? ? 1.53 3 5 "HO2'" B U 5 ? ? OP1 B U 6 ? ? 1.56 4 16 "HO2'" B U 5 ? ? OP1 B U 6 ? ? 1.56 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B U 5 ? ? "C1'" B U 5 ? ? N1 B U 5 ? ? 112.71 108.50 4.21 0.70 N 2 1 "C5'" B U 7 ? ? "C4'" B U 7 ? ? "C3'" B U 7 ? ? 106.68 115.20 -8.52 1.40 N 3 1 "O4'" B U 7 ? ? "C1'" B U 7 ? ? N1 B U 7 ? ? 114.19 108.50 5.69 0.70 N 4 2 "O4'" B U 7 ? ? "C1'" B U 7 ? ? N1 B U 7 ? ? 114.39 108.50 5.89 0.70 N 5 3 "O4'" B U 5 ? ? "C1'" B U 5 ? ? N1 B U 5 ? ? 112.79 108.50 4.29 0.70 N 6 5 "O4'" B U 7 ? ? "C1'" B U 7 ? ? N1 B U 7 ? ? 113.69 108.50 5.19 0.70 N 7 6 "O4'" B U 7 ? ? "C1'" B U 7 ? ? N1 B U 7 ? ? 113.86 108.50 5.36 0.70 N 8 7 "O4'" B U 7 ? ? "C1'" B U 7 ? ? N1 B U 7 ? ? 114.97 108.50 6.47 0.70 N 9 8 "O4'" B U 7 ? ? "C1'" B U 7 ? ? N1 B U 7 ? ? 115.49 108.50 6.99 0.70 N 10 9 "O4'" B U 5 ? ? "C1'" B U 5 ? ? N1 B U 5 ? ? 112.76 108.50 4.26 0.70 N 11 10 "O4'" B U 7 ? ? "C1'" B U 7 ? ? N1 B U 7 ? ? 114.07 108.50 5.57 0.70 N 12 11 "O4'" B U 7 ? ? "C1'" B U 7 ? ? N1 B U 7 ? ? 114.43 108.50 5.93 0.70 N 13 12 "O4'" B A 4 ? ? "C1'" B A 4 ? ? N9 B A 4 ? ? 112.75 108.50 4.25 0.70 N 14 12 "O4'" B U 5 ? ? "C1'" B U 5 ? ? N1 B U 5 ? ? 112.95 108.50 4.45 0.70 N 15 12 "O4'" B U 7 ? ? "C1'" B U 7 ? ? N1 B U 7 ? ? 114.95 108.50 6.45 0.70 N 16 13 "O4'" B U 7 ? ? "C1'" B U 7 ? ? N1 B U 7 ? ? 114.45 108.50 5.95 0.70 N 17 14 "O4'" B U 5 ? ? "C1'" B U 5 ? ? N1 B U 5 ? ? 112.97 108.50 4.47 0.70 N 18 14 "O4'" B U 7 ? ? "C1'" B U 7 ? ? N1 B U 7 ? ? 114.48 108.50 5.98 0.70 N 19 15 "O4'" B U 7 ? ? "C1'" B U 7 ? ? N1 B U 7 ? ? 114.17 108.50 5.67 0.70 N 20 16 "O4'" B U 5 ? ? "C1'" B U 5 ? ? N1 B U 5 ? ? 113.44 108.50 4.94 0.70 N 21 16 "C5'" B U 7 ? ? "C4'" B U 7 ? ? "C3'" B U 7 ? ? 106.49 115.20 -8.71 1.40 N 22 16 "O4'" B U 7 ? ? "C1'" B U 7 ? ? N1 B U 7 ? ? 113.63 108.50 5.13 0.70 N 23 17 "O4'" B U 7 ? ? "C1'" B U 7 ? ? N1 B U 7 ? ? 115.28 108.50 6.78 0.70 N 24 18 "O4'" B U 5 ? ? "C1'" B U 5 ? ? N1 B U 5 ? ? 113.02 108.50 4.52 0.70 N 25 18 "O4'" B U 7 ? ? "C1'" B U 7 ? ? N1 B U 7 ? ? 115.72 108.50 7.22 0.70 N 26 19 "O4'" B U 7 ? ? "C1'" B U 7 ? ? N1 B U 7 ? ? 114.95 108.50 6.45 0.70 N 27 20 "O4'" B U 5 ? ? "C1'" B U 5 ? ? N1 B U 5 ? ? 112.81 108.50 4.31 0.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 10 ? ? 52.38 -153.28 2 1 GLU A 12 ? ? -144.85 15.65 3 1 ARG A 32 ? ? 42.36 86.52 4 1 ASN A 37 ? ? 57.32 7.28 5 1 PRO A 55 ? ? -54.92 105.89 6 1 GLU A 71 ? ? -43.87 -17.56 7 1 LEU A 129 ? ? -37.93 106.86 8 1 SER A 134 ? ? 66.10 -2.52 9 1 LYS A 137 ? ? 60.96 -17.68 10 1 LEU A 145 ? ? 57.50 178.44 11 1 LEU A 171 ? ? -168.80 -70.60 12 1 PRO A 172 ? ? -60.98 83.54 13 1 GLN A 180 ? ? 55.47 176.38 14 1 SER A 204 ? ? -73.01 -168.50 15 1 CYS A 207 ? ? 59.87 18.95 16 1 GLU A 209 ? ? -97.10 -134.88 17 2 ARG A 32 ? ? 42.68 86.53 18 2 ASN A 37 ? ? 58.92 17.16 19 2 PRO A 47 ? ? -63.79 4.58 20 2 SER A 52 ? ? -155.11 66.16 21 2 ARG A 83 ? ? -167.02 117.10 22 2 HIS A 119 ? ? -66.71 14.01 23 2 ASN A 120 ? ? -148.90 22.59 24 2 PRO A 128 ? ? -69.68 82.85 25 2 LEU A 129 ? ? -39.76 106.77 26 2 ARG A 133 ? ? -140.80 16.24 27 2 SER A 134 ? ? -112.96 -167.15 28 2 LEU A 145 ? ? 60.25 174.05 29 2 LEU A 171 ? ? -170.16 -69.15 30 2 SER A 204 ? ? -63.38 -172.11 31 2 CYS A 207 ? ? -161.96 104.34 32 2 GLU A 209 ? ? -146.71 -149.93 33 3 GLU A 12 ? ? -141.35 19.27 34 3 ARG A 32 ? ? 43.50 88.77 35 3 ASN A 37 ? ? 57.77 3.52 36 3 PRO A 47 ? ? -59.18 174.62 37 3 SER A 58 ? ? 47.05 25.58 38 3 TYR A 70 ? ? -100.83 -166.35 39 3 HIS A 119 ? ? -65.85 8.52 40 3 ASN A 120 ? ? -144.10 14.08 41 3 PRO A 125 ? ? -68.86 0.39 42 3 PRO A 128 ? ? -68.23 81.17 43 3 LEU A 129 ? ? -41.26 107.04 44 3 LEU A 145 ? ? 59.78 174.86 45 3 LEU A 171 ? ? -170.18 -79.00 46 3 GLN A 180 ? ? 57.73 152.21 47 3 SER A 204 ? ? -73.56 -165.18 48 3 CYS A 207 ? ? 57.89 17.24 49 3 GLU A 209 ? ? -98.90 -138.22 50 4 GLU A 12 ? ? -141.34 19.99 51 4 ARG A 32 ? ? 43.27 87.63 52 4 ASN A 37 ? ? 54.96 12.48 53 4 PRO A 47 ? ? -59.71 -5.28 54 4 SER A 52 ? ? -161.75 107.87 55 4 ALA A 56 ? ? 65.20 149.04 56 4 LEU A 96 ? ? -158.31 -70.11 57 4 ASN A 120 ? ? -85.80 49.03 58 4 LEU A 129 ? ? -43.12 103.65 59 4 ARG A 133 ? ? -80.55 -156.93 60 4 CYS A 138 ? ? -56.99 -8.00 61 4 LEU A 145 ? ? 59.24 175.81 62 4 LEU A 171 ? ? -166.18 -69.42 63 4 PRO A 172 ? ? -58.42 170.92 64 4 SER A 204 ? ? -68.82 -172.22 65 4 HIS A 205 ? ? 55.86 76.75 66 4 CYS A 207 ? ? -160.03 -29.55 67 5 GLU A 12 ? ? -141.83 20.00 68 5 ARG A 32 ? ? 45.87 87.32 69 5 PRO A 55 ? ? -66.45 95.16 70 5 ALA A 56 ? ? -151.36 5.75 71 5 TYR A 70 ? ? -103.35 -168.96 72 5 PHE A 93 ? ? 54.68 -167.33 73 5 HIS A 119 ? ? -64.46 8.05 74 5 ASN A 120 ? ? -150.82 19.67 75 5 ARG A 124 ? ? -158.00 -59.59 76 5 PRO A 125 ? ? -75.99 -168.70 77 5 CYS A 127 ? ? 41.39 95.21 78 5 PRO A 128 ? ? -72.02 30.35 79 5 LEU A 129 ? ? -38.63 105.03 80 5 ARG A 133 ? ? -149.74 29.27 81 5 THR A 135 ? ? -172.01 -48.80 82 5 GLU A 136 ? ? 61.26 -31.68 83 5 LYS A 137 ? ? 58.48 -17.74 84 5 LEU A 145 ? ? 62.44 168.46 85 5 PRO A 147 ? ? -79.51 -98.51 86 5 LEU A 171 ? ? -173.47 -74.39 87 5 PRO A 172 ? ? -62.08 85.45 88 5 ALA A 177 ? ? -166.26 45.50 89 5 PRO A 178 ? ? -66.93 -179.16 90 5 CYS A 207 ? ? 58.76 19.19 91 5 GLU A 209 ? ? -102.43 -140.34 92 5 ARG A 234 ? ? -146.30 32.46 93 6 MET A 11 ? ? -150.74 19.44 94 6 GLU A 12 ? ? -141.71 20.23 95 6 ARG A 32 ? ? 43.50 87.25 96 6 PRO A 55 ? ? -55.56 -7.74 97 6 SER A 58 ? ? -73.64 22.89 98 6 GLU A 71 ? ? -38.97 -22.97 99 6 ASN A 97 ? ? -39.97 120.32 100 6 SER A 126 ? ? 55.87 19.80 101 6 PRO A 128 ? ? -69.23 83.12 102 6 LEU A 129 ? ? -50.50 100.59 103 6 ARG A 133 ? ? -146.17 14.11 104 6 SER A 134 ? ? -93.81 -151.66 105 6 LEU A 145 ? ? 61.11 173.42 106 6 LEU A 171 ? ? -169.29 -70.19 107 6 PRO A 172 ? ? -57.42 170.80 108 6 SER A 204 ? ? -67.82 -173.08 109 6 CYS A 207 ? ? -162.39 104.70 110 6 GLU A 209 ? ? -146.29 -152.75 111 7 ARG A 32 ? ? 42.39 88.75 112 7 THR A 92 ? ? -125.08 -155.49 113 7 PHE A 93 ? ? -49.48 156.69 114 7 LEU A 96 ? ? -165.63 -39.42 115 7 ARG A 98 ? ? 63.88 -37.27 116 7 HIS A 119 ? ? -67.07 9.27 117 7 ASN A 120 ? ? -148.09 15.48 118 7 LEU A 129 ? ? -37.13 108.93 119 7 SER A 134 ? ? 59.48 -164.16 120 7 LEU A 145 ? ? 59.94 177.54 121 7 LEU A 171 ? ? -171.47 -70.77 122 7 PRO A 172 ? ? -56.28 171.97 123 7 ALA A 177 ? ? -156.92 39.78 124 7 PRO A 178 ? ? -64.06 -176.30 125 7 GLU A 209 ? ? -108.32 -149.84 126 8 ALA A 10 ? ? 58.95 165.00 127 8 MET A 11 ? ? -159.09 15.23 128 8 GLU A 12 ? ? -144.27 17.38 129 8 ARG A 32 ? ? 43.33 88.69 130 8 ASN A 37 ? ? 55.85 11.89 131 8 PRO A 55 ? ? -58.72 1.31 132 8 GLU A 71 ? ? -29.84 -41.44 133 8 HIS A 72 ? ? -67.60 0.93 134 8 ARG A 83 ? ? -164.95 115.63 135 8 PHE A 93 ? ? 53.44 160.39 136 8 PRO A 125 ? ? -69.38 6.21 137 8 SER A 126 ? ? -146.41 29.62 138 8 CYS A 127 ? ? -150.05 89.40 139 8 ARG A 133 ? ? -146.40 16.27 140 8 SER A 134 ? ? -95.22 -157.07 141 8 LEU A 145 ? ? 64.01 173.37 142 8 LEU A 171 ? ? 179.51 -68.99 143 8 PRO A 172 ? ? -67.12 82.51 144 8 CYS A 207 ? ? -162.14 91.60 145 9 ARG A 32 ? ? 44.53 87.41 146 9 ASN A 37 ? ? 59.59 1.47 147 9 TYR A 70 ? ? -104.37 -167.45 148 9 ARG A 83 ? ? -164.87 116.22 149 9 LEU A 96 ? ? -167.01 -46.82 150 9 ASN A 120 ? ? -87.16 46.81 151 9 LEU A 129 ? ? -40.20 107.29 152 9 CYS A 138 ? ? -59.50 -2.98 153 9 LEU A 145 ? ? 62.70 173.42 154 9 LEU A 171 ? ? -169.16 -69.18 155 9 GLN A 180 ? ? 58.29 160.95 156 9 CYS A 207 ? ? -143.03 36.44 157 9 GLU A 209 ? ? -95.75 -140.77 158 10 ARG A 32 ? ? 41.94 87.51 159 10 ASN A 37 ? ? 58.70 -2.89 160 10 SER A 52 ? ? -154.72 66.76 161 10 PRO A 125 ? ? -60.00 2.10 162 10 LEU A 129 ? ? -40.87 99.62 163 10 LYS A 137 ? ? -77.72 47.63 164 10 LEU A 145 ? ? 59.62 172.95 165 10 LEU A 171 ? ? -169.54 -81.68 166 10 PRO A 172 ? ? -58.20 170.03 167 10 GLN A 180 ? ? 56.98 153.62 168 10 SER A 204 ? ? -66.59 -177.08 169 10 CYS A 207 ? ? -148.47 41.11 170 10 GLU A 209 ? ? -98.68 -141.32 171 11 GLU A 12 ? ? -142.02 20.44 172 11 ARG A 32 ? ? 42.68 88.03 173 11 ASN A 37 ? ? 54.44 8.80 174 11 ALA A 56 ? ? -152.39 -8.85 175 11 SER A 58 ? ? -66.85 27.66 176 11 GLU A 71 ? ? -24.25 -43.35 177 11 SER A 126 ? ? -142.11 35.53 178 11 ARG A 133 ? ? -91.00 -155.33 179 11 THR A 135 ? ? -82.72 36.18 180 11 LYS A 137 ? ? -75.59 47.73 181 11 LEU A 145 ? ? 60.25 173.28 182 11 LEU A 171 ? ? -169.47 -82.08 183 11 ALA A 177 ? ? -160.02 22.79 184 11 GLN A 180 ? ? 53.78 166.49 185 11 SER A 204 ? ? -69.33 -162.72 186 11 CYS A 207 ? ? 56.05 19.27 187 11 GLU A 209 ? ? -100.79 -139.95 188 12 ARG A 32 ? ? 42.16 86.28 189 12 ASN A 37 ? ? 57.61 2.85 190 12 PRO A 55 ? ? -60.95 8.41 191 12 SER A 58 ? ? 63.80 -9.52 192 12 ASN A 120 ? ? -81.00 42.82 193 12 LEU A 129 ? ? -47.82 99.07 194 12 SER A 134 ? ? 58.47 -150.14 195 12 LEU A 145 ? ? 59.94 173.08 196 12 LEU A 171 ? ? -165.78 -77.77 197 12 GLN A 180 ? ? 57.71 154.42 198 12 SER A 204 ? ? -57.12 -174.52 199 12 CYS A 207 ? ? -161.83 103.59 200 12 GLU A 209 ? ? -146.00 -147.62 201 12 ARG A 234 ? ? 57.60 178.26 202 13 ARG A 32 ? ? 43.13 88.44 203 13 TYR A 70 ? ? -104.02 -168.86 204 13 PHE A 93 ? ? -38.25 149.55 205 13 LEU A 96 ? ? -163.93 -148.30 206 13 PRO A 128 ? ? -69.26 79.35 207 13 LEU A 129 ? ? -47.67 104.59 208 13 ARG A 133 ? ? -142.14 18.29 209 13 SER A 134 ? ? -110.96 -167.69 210 13 LEU A 145 ? ? 61.73 173.94 211 13 LEU A 171 ? ? -169.26 -82.90 212 13 GLN A 180 ? ? 57.79 154.71 213 13 SER A 204 ? ? -69.92 -176.15 214 13 CYS A 207 ? ? -142.40 36.53 215 13 GLU A 209 ? ? -95.92 -141.22 216 14 VAL A 14 ? ? 38.48 -150.73 217 14 ARG A 32 ? ? 44.57 86.72 218 14 ALA A 56 ? ? -155.06 -5.45 219 14 TYR A 70 ? ? -109.47 -168.79 220 14 PHE A 93 ? ? 50.78 157.07 221 14 LEU A 96 ? ? -151.58 15.80 222 14 ASN A 97 ? ? 62.44 -176.05 223 14 HIS A 119 ? ? -67.09 9.93 224 14 ASN A 120 ? ? -146.15 10.08 225 14 LEU A 129 ? ? -41.20 106.82 226 14 ARG A 133 ? ? -147.90 17.23 227 14 GLU A 136 ? ? -151.62 -20.56 228 14 LYS A 137 ? ? 59.40 -7.08 229 14 LEU A 145 ? ? 59.76 173.73 230 14 LEU A 171 ? ? -176.50 -66.20 231 14 GLN A 180 ? ? 55.02 161.26 232 14 SER A 204 ? ? -68.33 11.00 233 14 CYS A 207 ? ? -161.48 103.64 234 14 GLU A 209 ? ? -151.66 -151.60 235 15 MET A 11 ? ? 59.08 17.41 236 15 GLU A 12 ? ? -151.38 14.06 237 15 VAL A 14 ? ? 37.54 -150.08 238 15 ARG A 32 ? ? 44.87 86.64 239 15 ASN A 37 ? ? 56.70 17.04 240 15 ALA A 56 ? ? -154.13 6.36 241 15 SER A 58 ? ? 45.58 26.97 242 15 GLU A 71 ? ? -35.87 -28.69 243 15 HIS A 72 ? ? -68.60 1.49 244 15 LEU A 84 ? ? 79.30 109.98 245 15 PRO A 125 ? ? -68.19 6.51 246 15 PRO A 128 ? ? -67.17 83.72 247 15 LEU A 129 ? ? -43.71 109.64 248 15 GLU A 136 ? ? 46.90 71.41 249 15 CYS A 138 ? ? -57.70 -6.27 250 15 LEU A 145 ? ? 60.47 173.11 251 15 LEU A 171 ? ? -168.55 -84.56 252 15 ALA A 177 ? ? -166.27 -41.69 253 15 PRO A 178 ? ? -68.64 -179.81 254 15 GLN A 180 ? ? 55.37 170.82 255 15 SER A 204 ? ? -67.63 -173.95 256 15 CYS A 207 ? ? -164.54 96.35 257 15 GLU A 209 ? ? -145.16 -157.26 258 16 GLU A 12 ? ? -80.28 37.63 259 16 ARG A 32 ? ? 43.43 86.94 260 16 ASN A 37 ? ? 54.63 11.97 261 16 PRO A 55 ? ? -60.21 3.26 262 16 SER A 58 ? ? -77.14 24.41 263 16 GLU A 71 ? ? -43.92 -19.26 264 16 ARG A 83 ? ? -168.20 112.50 265 16 HIS A 119 ? ? -67.57 7.51 266 16 ASN A 120 ? ? -146.18 10.17 267 16 PRO A 128 ? ? -68.61 78.82 268 16 LEU A 129 ? ? -46.88 106.22 269 16 ARG A 133 ? ? -149.77 23.40 270 16 THR A 135 ? ? -166.35 106.78 271 16 CYS A 138 ? ? -59.92 4.01 272 16 LEU A 145 ? ? 59.63 174.03 273 16 ASN A 148 ? ? -143.45 -0.34 274 16 LEU A 171 ? ? -166.89 -70.18 275 16 PRO A 172 ? ? -65.83 85.47 276 16 ALA A 177 ? ? -43.51 156.76 277 16 PRO A 178 ? ? -56.48 171.26 278 16 SER A 204 ? ? -67.64 -175.54 279 16 CYS A 207 ? ? -163.52 102.31 280 16 GLU A 209 ? ? -144.13 -153.19 281 17 VAL A 14 ? ? 38.46 -149.65 282 17 ARG A 32 ? ? 45.79 87.00 283 17 ASN A 37 ? ? 57.37 0.24 284 17 SER A 58 ? ? -73.59 20.49 285 17 GLU A 71 ? ? -39.28 -26.34 286 17 LEU A 96 ? ? 62.39 147.28 287 17 HIS A 119 ? ? -69.12 10.99 288 17 PRO A 125 ? ? -68.36 5.14 289 17 SER A 126 ? ? -146.49 34.91 290 17 LEU A 145 ? ? 59.58 177.49 291 17 LEU A 171 ? ? -170.61 -70.04 292 17 GLN A 180 ? ? 59.81 148.16 293 17 CYS A 207 ? ? -165.50 -30.63 294 17 GLU A 209 ? ? -135.46 -157.03 295 18 VAL A 14 ? ? -77.32 21.76 296 18 ARG A 32 ? ? 42.61 87.86 297 18 ASN A 37 ? ? 62.47 -1.23 298 18 PRO A 55 ? ? -60.34 8.27 299 18 ALA A 56 ? ? -67.06 0.16 300 18 TYR A 70 ? ? -105.59 -168.89 301 18 LEU A 96 ? ? 65.86 156.13 302 18 PRO A 128 ? ? -68.26 84.32 303 18 LEU A 129 ? ? -46.91 104.70 304 18 SER A 134 ? ? 75.94 152.78 305 18 CYS A 138 ? ? -58.78 5.54 306 18 LEU A 145 ? ? 60.55 173.69 307 18 LEU A 171 ? ? -171.72 -78.72 308 18 SER A 204 ? ? -73.64 -168.23 309 18 CYS A 207 ? ? 57.69 18.52 310 18 GLU A 209 ? ? -97.71 -138.02 311 19 ALA A 10 ? ? 52.27 -158.19 312 19 MET A 11 ? ? 63.03 -8.66 313 19 ARG A 32 ? ? 43.74 86.59 314 19 ASN A 37 ? ? 56.89 -2.74 315 19 SER A 52 ? ? 60.32 153.87 316 19 SER A 58 ? ? -178.03 -95.43 317 19 GLU A 59 ? ? 76.21 112.60 318 19 TYR A 70 ? ? -106.84 -157.14 319 19 HIS A 119 ? ? -66.93 10.11 320 19 ASN A 120 ? ? -143.43 14.14 321 19 PRO A 128 ? ? -67.79 87.80 322 19 LEU A 129 ? ? -40.26 104.85 323 19 GLU A 136 ? ? -68.32 73.68 324 19 LYS A 137 ? ? -76.79 48.17 325 19 CYS A 138 ? ? -144.80 -1.98 326 19 LEU A 145 ? ? 62.96 172.56 327 19 LEU A 171 ? ? -165.64 -70.29 328 19 GLN A 180 ? ? 59.15 147.31 329 19 SER A 204 ? ? -70.14 -164.33 330 19 CYS A 207 ? ? 57.54 18.91 331 19 GLU A 209 ? ? -98.87 -134.32 332 20 ARG A 32 ? ? 44.06 88.93 333 20 ASN A 37 ? ? 57.16 3.78 334 20 ALA A 56 ? ? -156.83 7.32 335 20 TYR A 70 ? ? -103.93 -165.94 336 20 LEU A 84 ? ? 81.73 95.16 337 20 PHE A 93 ? ? 62.94 163.44 338 20 LEU A 96 ? ? -72.03 -152.29 339 20 ASN A 120 ? ? -144.75 17.91 340 20 PRO A 122 ? ? -69.75 64.78 341 20 PRO A 125 ? ? -58.90 -3.60 342 20 CYS A 127 ? ? 29.75 64.69 343 20 LEU A 129 ? ? -44.52 103.48 344 20 THR A 135 ? ? 55.23 73.01 345 20 LEU A 145 ? ? 59.66 175.64 346 20 LEU A 171 ? ? -166.95 -78.67 347 20 PRO A 172 ? ? -55.43 174.63 348 20 SER A 204 ? ? -66.93 -174.58 349 20 GLU A 209 ? ? -99.07 -138.41 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 2 U B 6 ? ? 0.065 'SIDE CHAIN' 2 3 U B 7 ? ? 0.067 'SIDE CHAIN' 3 4 U B 6 ? ? 0.067 'SIDE CHAIN' 4 13 U B 2 ? ? 0.060 'SIDE CHAIN' # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Swiss National Science Foundation' Switzerland 31003A_149921 1 'Swiss National Science Foundation' Switzerland 31003A_170130 2 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR Distance Restraints' _pdbx_struct_assembly_auth_evidence.details ? #