data_7W16 # _entry.id 7W16 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.359 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7W16 pdb_00007w16 10.2210/pdb7w16/pdb WWPDB D_1300025678 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7W16 _pdbx_database_status.recvd_initial_deposition_date 2021-11-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Liu, W.Z.' 1 ? 'Lyu, Q.Q.' 2 ? 'Li, Z.J.' 3 ? 'Zhang, K.K.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Commun Biol' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2399-3642 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 5 _citation.language ? _citation.page_first 782 _citation.page_last 782 _citation.title 'Determination of oligosaccharide product distributions of PL7 alginate lyases by their structural elements.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s42003-022-03721-1 _citation.pdbx_database_id_PubMed 35918517 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, K.' 1 ? primary 'Li, Z.' 2 ? primary 'Zhu, Q.' 3 ? primary 'Cao, H.' 4 ? primary 'He, X.' 5 ? primary 'Zhang, X.H.' 6 0000-0002-7428-7775 primary 'Liu, W.' 7 0000-0001-9841-1999 primary 'Lyu, Q.' 8 0000-0001-7985-9245 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 7W16 _cell.details ? _cell.formula_units_Z ? _cell.length_a 80.405 _cell.length_a_esd ? _cell.length_b 80.405 _cell.length_b_esd ? _cell.length_c 113.775 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7W16 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'alginate lyase' 33442.180 1 ? ? ? ? 2 branched man 'beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid' 370.263 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 123 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSMANASDKAAPADYEQFQDVLKVSKLQASDPEGKSGNKSEYALNGEF DGLVLDSFYVDKASEALVFKMPGYKNASEVRIYKNFNVGEADKYYHLGAEIKPINPRASVANTDKAKNDAITYLQVHNAG SVSADFPDGVSGEGYIPHPLVRVVYEAERSGKNDWYWAVIKNNAVNCGSKSGNKGTEECKNAYLKLPIAPIAKEGTDKFD IYVGGNKLIINHNDKTAINHDITYWNEKKSYFKAGVYNQFKNGESEAHFYKLTYSVESEPVIR ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSMANASDKAAPADYEQFQDVLKVSKLQASDPEGKSGNKSEYALNGEF DGLVLDSFYVDKASEALVFKMPGYKNASEVRIYKNFNVGEADKYYHLGAEIKPINPRASVANTDKAKNDAITYLQVHNAG SVSADFPDGVSGEGYIPHPLVRVVYEAERSGKNDWYWAVIKNNAVNCGSKSGNKGTEECKNAYLKLPIAPIAKEGTDKFD IYVGGNKLIINHNDKTAINHDITYWNEKKSYFKAGVYNQFKNGESEAHFYKLTYSVESEPVIR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 ALA n 1 23 SER n 1 24 MET n 1 25 THR n 1 26 GLY n 1 27 GLY n 1 28 GLN n 1 29 GLN n 1 30 MET n 1 31 GLY n 1 32 ARG n 1 33 GLY n 1 34 SER n 1 35 MET n 1 36 ALA n 1 37 ASN n 1 38 ALA n 1 39 SER n 1 40 ASP n 1 41 LYS n 1 42 ALA n 1 43 ALA n 1 44 PRO n 1 45 ALA n 1 46 ASP n 1 47 TYR n 1 48 GLU n 1 49 GLN n 1 50 PHE n 1 51 GLN n 1 52 ASP n 1 53 VAL n 1 54 LEU n 1 55 LYS n 1 56 VAL n 1 57 SER n 1 58 LYS n 1 59 LEU n 1 60 GLN n 1 61 ALA n 1 62 SER n 1 63 ASP n 1 64 PRO n 1 65 GLU n 1 66 GLY n 1 67 LYS n 1 68 SER n 1 69 GLY n 1 70 ASN n 1 71 LYS n 1 72 SER n 1 73 GLU n 1 74 TYR n 1 75 ALA n 1 76 LEU n 1 77 ASN n 1 78 GLY n 1 79 GLU n 1 80 PHE n 1 81 ASP n 1 82 GLY n 1 83 LEU n 1 84 VAL n 1 85 LEU n 1 86 ASP n 1 87 SER n 1 88 PHE n 1 89 TYR n 1 90 VAL n 1 91 ASP n 1 92 LYS n 1 93 ALA n 1 94 SER n 1 95 GLU n 1 96 ALA n 1 97 LEU n 1 98 VAL n 1 99 PHE n 1 100 LYS n 1 101 MET n 1 102 PRO n 1 103 GLY n 1 104 TYR n 1 105 LYS n 1 106 ASN n 1 107 ALA n 1 108 SER n 1 109 GLU n 1 110 VAL n 1 111 ARG n 1 112 ILE n 1 113 TYR n 1 114 LYS n 1 115 ASN n 1 116 PHE n 1 117 ASN n 1 118 VAL n 1 119 GLY n 1 120 GLU n 1 121 ALA n 1 122 ASP n 1 123 LYS n 1 124 TYR n 1 125 TYR n 1 126 HIS n 1 127 LEU n 1 128 GLY n 1 129 ALA n 1 130 GLU n 1 131 ILE n 1 132 LYS n 1 133 PRO n 1 134 ILE n 1 135 ASN n 1 136 PRO n 1 137 ARG n 1 138 ALA n 1 139 SER n 1 140 VAL n 1 141 ALA n 1 142 ASN n 1 143 THR n 1 144 ASP n 1 145 LYS n 1 146 ALA n 1 147 LYS n 1 148 ASN n 1 149 ASP n 1 150 ALA n 1 151 ILE n 1 152 THR n 1 153 TYR n 1 154 LEU n 1 155 GLN n 1 156 VAL n 1 157 HIS n 1 158 ASN n 1 159 ALA n 1 160 GLY n 1 161 SER n 1 162 VAL n 1 163 SER n 1 164 ALA n 1 165 ASP n 1 166 PHE n 1 167 PRO n 1 168 ASP n 1 169 GLY n 1 170 VAL n 1 171 SER n 1 172 GLY n 1 173 GLU n 1 174 GLY n 1 175 TYR n 1 176 ILE n 1 177 PRO n 1 178 HIS n 1 179 PRO n 1 180 LEU n 1 181 VAL n 1 182 ARG n 1 183 VAL n 1 184 VAL n 1 185 TYR n 1 186 GLU n 1 187 ALA n 1 188 GLU n 1 189 ARG n 1 190 SER n 1 191 GLY n 1 192 LYS n 1 193 ASN n 1 194 ASP n 1 195 TRP n 1 196 TYR n 1 197 TRP n 1 198 ALA n 1 199 VAL n 1 200 ILE n 1 201 LYS n 1 202 ASN n 1 203 ASN n 1 204 ALA n 1 205 VAL n 1 206 ASN n 1 207 CYS n 1 208 GLY n 1 209 SER n 1 210 LYS n 1 211 SER n 1 212 GLY n 1 213 ASN n 1 214 LYS n 1 215 GLY n 1 216 THR n 1 217 GLU n 1 218 GLU n 1 219 CYS n 1 220 LYS n 1 221 ASN n 1 222 ALA n 1 223 TYR n 1 224 LEU n 1 225 LYS n 1 226 LEU n 1 227 PRO n 1 228 ILE n 1 229 ALA n 1 230 PRO n 1 231 ILE n 1 232 ALA n 1 233 LYS n 1 234 GLU n 1 235 GLY n 1 236 THR n 1 237 ASP n 1 238 LYS n 1 239 PHE n 1 240 ASP n 1 241 ILE n 1 242 TYR n 1 243 VAL n 1 244 GLY n 1 245 GLY n 1 246 ASN n 1 247 LYS n 1 248 LEU n 1 249 ILE n 1 250 ILE n 1 251 ASN n 1 252 HIS n 1 253 ASN n 1 254 ASP n 1 255 LYS n 1 256 THR n 1 257 ALA n 1 258 ILE n 1 259 ASN n 1 260 HIS n 1 261 ASP n 1 262 ILE n 1 263 THR n 1 264 TYR n 1 265 TRP n 1 266 ASN n 1 267 GLU n 1 268 LYS n 1 269 LYS n 1 270 SER n 1 271 TYR n 1 272 PHE n 1 273 LYS n 1 274 ALA n 1 275 GLY n 1 276 VAL n 1 277 TYR n 1 278 ASN n 1 279 GLN n 1 280 PHE n 1 281 LYS n 1 282 ASN n 1 283 GLY n 1 284 GLU n 1 285 SER n 1 286 GLU n 1 287 ALA n 1 288 HIS n 1 289 PHE n 1 290 TYR n 1 291 LYS n 1 292 LEU n 1 293 THR n 1 294 TYR n 1 295 SER n 1 296 VAL n 1 297 GLU n 1 298 SER n 1 299 GLU n 1 300 PRO n 1 301 VAL n 1 302 ILE n 1 303 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 303 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vibrio pelagius' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 28169 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7W16 _struct_ref.pdbx_db_accession 7W16 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7W16 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 303 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 7W16 _struct_ref_seq.db_align_beg 0 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 302 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 0 _struct_ref_seq.pdbx_auth_seq_align_end 302 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BEM 'D-saccharide, beta linking' . 'beta-D-mannopyranuronic acid' 'beta-D-mannuronic acid; D-mannuronic acid; mannuronic acid; (2S,3S,4S,5S,6R)-3,4,5,6-tetrahydroxyoxane-2-carboxylic acid' 'C6 H10 O7' 194.139 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7W16 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.17 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 65.87 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 288.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'Sodium citrate tribasic dihydrate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-10-22 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL18U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL18U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7W16 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.9 _reflns.d_resolution_low 50.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 34336 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 17.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 20.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.049 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.9 _reflns_shell.d_res_low 1.97 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.7 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 3385 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 15.6 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.281 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] 0.1400 _refine.aniso_B[1][2] 0.0700 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 0.1400 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -0.4400 _refine.B_iso_max 99.850 _refine.B_iso_mean 22.1580 _refine.B_iso_min 4.020 _refine.correlation_coeff_Fo_to_Fc 0.9680 _refine.correlation_coeff_Fo_to_Fc_free 0.9480 _refine.details 'U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7W16 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.9000 _refine.ls_d_res_low 50.0000 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 32045 _refine.ls_number_reflns_R_free 1706 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.9000 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1450 _refine.ls_R_factor_R_free 0.1926 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1425 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1190 _refine.pdbx_overall_ESU_R_Free 0.0990 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 5.2410 _refine.overall_SU_ML 0.0680 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.9000 _refine_hist.d_res_low 50.0000 _refine_hist.number_atoms_solvent 123 _refine_hist.number_atoms_total 2215 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 264 _refine_hist.pdbx_B_iso_mean_ligand 28.73 _refine_hist.pdbx_B_iso_mean_solvent 30.31 _refine_hist.pdbx_number_atoms_protein 2061 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.022 0.019 2159 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 2.307 1.960 2932 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 8.321 5.000 267 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 39.812 25.347 101 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 15.678 15.000 346 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 24.681 15.000 5 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.184 0.200 314 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.009 0.021 1665 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 7.196 3.000 2159 ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? 22.471 5.000 34 ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? 18.458 5.000 2195 ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.9000 _refine_ls_shell.d_res_low 1.9490 _refine_ls_shell.number_reflns_all 2139 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 134 _refine_ls_shell.number_reflns_R_work 2005 _refine_ls_shell.percent_reflns_obs 86.9200 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2770 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.1830 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 7W16 _struct.title 'Complex structure of alginate lyase AlyV with M8' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7W16 _struct_keywords.text 'PL7 family, alginate lyase, complex, LYASE' _struct_keywords.pdbx_keywords LYASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 43 ? ASP A 46 ? ALA A 42 ASP A 45 5 ? 4 HELX_P HELX_P2 AA2 TYR A 47 ? VAL A 56 ? TYR A 46 VAL A 55 1 ? 10 HELX_P HELX_P3 AA3 ASN A 135 ? ALA A 141 ? ASN A 134 ALA A 140 1 ? 7 HELX_P HELX_P4 AA4 THR A 216 ? ASN A 221 ? THR A 215 ASN A 220 1 ? 6 HELX_P HELX_P5 AA5 THR A 263 ? ASN A 266 ? THR A 262 ASN A 265 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 207 SG ? ? ? 1_555 A CYS 219 SG ? ? A CYS 206 A CYS 218 1_555 ? ? ? ? ? ? ? 2.893 ? ? covale1 covale both ? B BEM . O4 ? ? ? 1_555 B BEM . C1 ? ? B BEM 1 B BEM 2 1_555 ? ? ? ? ? ? ? 1.434 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel AA2 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 41 ? ALA A 42 ? LYS A 40 ALA A 41 AA1 2 PHE A 88 ? ASP A 91 ? PHE A 87 ASP A 90 AA1 3 ALA A 96 ? PRO A 102 ? ALA A 95 PRO A 101 AA1 4 GLU A 284 ? GLU A 297 ? GLU A 283 GLU A 296 AA1 5 TYR A 124 ? PRO A 133 ? TYR A 123 PRO A 132 AA1 6 ASP A 237 ? GLY A 244 ? ASP A 236 GLY A 243 AA1 7 LYS A 247 ? HIS A 252 ? LYS A 246 HIS A 251 AA1 8 LYS A 255 ? ASP A 261 ? LYS A 254 ASP A 260 AA2 1 SER A 72 ? TYR A 74 ? SER A 71 TYR A 73 AA2 2 SER A 57 ? ALA A 61 ? SER A 56 ALA A 60 AA2 3 ALA A 107 ? ILE A 112 ? ALA A 106 ILE A 111 AA2 4 LYS A 268 ? PHE A 280 ? LYS A 267 PHE A 279 AA2 5 ASP A 149 ? SER A 161 ? ASP A 148 SER A 160 AA2 6 VAL A 181 ? ARG A 189 ? VAL A 180 ARG A 188 AA2 7 LYS A 192 ? LYS A 201 ? LYS A 191 LYS A 200 AA2 8 TYR A 223 ? PRO A 230 ? TYR A 222 PRO A 229 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ALA A 42 ? N ALA A 41 O VAL A 90 ? O VAL A 89 AA1 2 3 N TYR A 89 ? N TYR A 88 O VAL A 98 ? O VAL A 97 AA1 3 4 N LEU A 97 ? N LEU A 96 O PHE A 289 ? O PHE A 288 AA1 4 5 O GLU A 297 ? O GLU A 296 N TYR A 124 ? N TYR A 123 AA1 5 6 N TYR A 125 ? N TYR A 124 O VAL A 243 ? O VAL A 242 AA1 6 7 N ASP A 240 ? N ASP A 239 O ASN A 251 ? O ASN A 250 AA1 7 8 N ILE A 250 ? N ILE A 249 O ALA A 257 ? O ALA A 256 AA2 1 2 O TYR A 74 ? O TYR A 73 N LEU A 59 ? N LEU A 58 AA2 2 3 N GLN A 60 ? N GLN A 59 O GLU A 109 ? O GLU A 108 AA2 3 4 N VAL A 110 ? N VAL A 109 O ALA A 274 ? O ALA A 273 AA2 4 5 O TYR A 277 ? O TYR A 276 N THR A 152 ? N THR A 151 AA2 5 6 N TYR A 153 ? N TYR A 152 O VAL A 183 ? O VAL A 182 AA2 6 7 N ARG A 182 ? N ARG A 181 O VAL A 199 ? O VAL A 198 AA2 7 8 N ILE A 200 ? N ILE A 199 O LEU A 224 ? O LEU A 223 # _atom_sites.entry_id 7W16 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.012437 _atom_sites.fract_transf_matrix[1][2] 0.007181 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014361 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008789 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 ? ? ? A . n A 1 2 GLY 2 1 ? ? ? A . n A 1 3 SER 3 2 ? ? ? A . n A 1 4 SER 4 3 ? ? ? A . n A 1 5 HIS 5 4 ? ? ? A . n A 1 6 HIS 6 5 ? ? ? A . n A 1 7 HIS 7 6 ? ? ? A . n A 1 8 HIS 8 7 ? ? ? A . n A 1 9 HIS 9 8 ? ? ? A . n A 1 10 HIS 10 9 ? ? ? A . n A 1 11 SER 11 10 ? ? ? A . n A 1 12 SER 12 11 ? ? ? A . n A 1 13 GLY 13 12 ? ? ? A . n A 1 14 LEU 14 13 ? ? ? A . n A 1 15 VAL 15 14 ? ? ? A . n A 1 16 PRO 16 15 ? ? ? A . n A 1 17 ARG 17 16 ? ? ? A . n A 1 18 GLY 18 17 ? ? ? A . n A 1 19 SER 19 18 ? ? ? A . n A 1 20 HIS 20 19 ? ? ? A . n A 1 21 MET 21 20 ? ? ? A . n A 1 22 ALA 22 21 ? ? ? A . n A 1 23 SER 23 22 ? ? ? A . n A 1 24 MET 24 23 ? ? ? A . n A 1 25 THR 25 24 ? ? ? A . n A 1 26 GLY 26 25 ? ? ? A . n A 1 27 GLY 27 26 ? ? ? A . n A 1 28 GLN 28 27 ? ? ? A . n A 1 29 GLN 29 28 ? ? ? A . n A 1 30 MET 30 29 ? ? ? A . n A 1 31 GLY 31 30 ? ? ? A . n A 1 32 ARG 32 31 ? ? ? A . n A 1 33 GLY 33 32 ? ? ? A . n A 1 34 SER 34 33 ? ? ? A . n A 1 35 MET 35 34 ? ? ? A . n A 1 36 ALA 36 35 ? ? ? A . n A 1 37 ASN 37 36 ? ? ? A . n A 1 38 ALA 38 37 ? ? ? A . n A 1 39 SER 39 38 ? ? ? A . n A 1 40 ASP 40 39 39 ASP ALA A . n A 1 41 LYS 41 40 40 LYS LYS A . n A 1 42 ALA 42 41 41 ALA ALA A . n A 1 43 ALA 43 42 42 ALA ALA A . n A 1 44 PRO 44 43 43 PRO PRO A . n A 1 45 ALA 45 44 44 ALA ALA A . n A 1 46 ASP 46 45 45 ASP ASP A . n A 1 47 TYR 47 46 46 TYR TYR A . n A 1 48 GLU 48 47 47 GLU GLU A . n A 1 49 GLN 49 48 48 GLN GLN A . n A 1 50 PHE 50 49 49 PHE PHE A . n A 1 51 GLN 51 50 50 GLN GLN A . n A 1 52 ASP 52 51 51 ASP ASP A . n A 1 53 VAL 53 52 52 VAL VAL A . n A 1 54 LEU 54 53 53 LEU LEU A . n A 1 55 LYS 55 54 54 LYS LYS A . n A 1 56 VAL 56 55 55 VAL VAL A . n A 1 57 SER 57 56 56 SER SER A . n A 1 58 LYS 58 57 57 LYS LYS A . n A 1 59 LEU 59 58 58 LEU LEU A . n A 1 60 GLN 60 59 59 GLN GLN A . n A 1 61 ALA 61 60 60 ALA ALA A . n A 1 62 SER 62 61 61 SER SER A . n A 1 63 ASP 63 62 62 ASP ASP A . n A 1 64 PRO 64 63 63 PRO PRO A . n A 1 65 GLU 65 64 64 GLU GLU A . n A 1 66 GLY 66 65 65 GLY GLY A . n A 1 67 LYS 67 66 66 LYS LYS A . n A 1 68 SER 68 67 67 SER SER A . n A 1 69 GLY 69 68 68 GLY GLY A . n A 1 70 ASN 70 69 69 ASN ASN A . n A 1 71 LYS 71 70 70 LYS LYS A . n A 1 72 SER 72 71 71 SER SER A . n A 1 73 GLU 73 72 72 GLU GLU A . n A 1 74 TYR 74 73 73 TYR TYR A . n A 1 75 ALA 75 74 74 ALA ALA A . n A 1 76 LEU 76 75 75 LEU LEU A . n A 1 77 ASN 77 76 76 ASN ASN A . n A 1 78 GLY 78 77 77 GLY GLY A . n A 1 79 GLU 79 78 78 GLU GLU A . n A 1 80 PHE 80 79 79 PHE PHE A . n A 1 81 ASP 81 80 80 ASP ASP A . n A 1 82 GLY 82 81 81 GLY GLY A . n A 1 83 LEU 83 82 82 LEU LEU A . n A 1 84 VAL 84 83 83 VAL VAL A . n A 1 85 LEU 85 84 84 LEU LEU A . n A 1 86 ASP 86 85 85 ASP ASP A . n A 1 87 SER 87 86 86 SER SER A . n A 1 88 PHE 88 87 87 PHE PHE A . n A 1 89 TYR 89 88 88 TYR TYR A . n A 1 90 VAL 90 89 89 VAL VAL A . n A 1 91 ASP 91 90 90 ASP ASP A . n A 1 92 LYS 92 91 91 LYS LYS A . n A 1 93 ALA 93 92 92 ALA ALA A . n A 1 94 SER 94 93 93 SER SER A . n A 1 95 GLU 95 94 94 GLU GLU A . n A 1 96 ALA 96 95 95 ALA ALA A . n A 1 97 LEU 97 96 96 LEU LEU A . n A 1 98 VAL 98 97 97 VAL VAL A . n A 1 99 PHE 99 98 98 PHE PHE A . n A 1 100 LYS 100 99 99 LYS LYS A . n A 1 101 MET 101 100 100 MET MET A . n A 1 102 PRO 102 101 101 PRO PRO A . n A 1 103 GLY 103 102 102 GLY GLY A . n A 1 104 TYR 104 103 103 TYR TYR A . n A 1 105 LYS 105 104 104 LYS LYS A . n A 1 106 ASN 106 105 105 ASN ASN A . n A 1 107 ALA 107 106 106 ALA ALA A . n A 1 108 SER 108 107 107 SER SER A . n A 1 109 GLU 109 108 108 GLU GLU A . n A 1 110 VAL 110 109 109 VAL VAL A . n A 1 111 ARG 111 110 110 ARG ARG A . n A 1 112 ILE 112 111 111 ILE ILE A . n A 1 113 TYR 113 112 112 TYR TYR A . n A 1 114 LYS 114 113 113 LYS LYS A . n A 1 115 ASN 115 114 114 ASN ASN A . n A 1 116 PHE 116 115 115 PHE PHE A . n A 1 117 ASN 117 116 116 ASN ASN A . n A 1 118 VAL 118 117 117 VAL VAL A . n A 1 119 GLY 119 118 118 GLY GLY A . n A 1 120 GLU 120 119 119 GLU GLU A . n A 1 121 ALA 121 120 120 ALA ALA A . n A 1 122 ASP 122 121 121 ASP ASP A . n A 1 123 LYS 123 122 122 LYS LYS A . n A 1 124 TYR 124 123 123 TYR TYR A . n A 1 125 TYR 125 124 124 TYR TYR A . n A 1 126 HIS 126 125 125 HIS HIS A . n A 1 127 LEU 127 126 126 LEU LEU A . n A 1 128 GLY 128 127 127 GLY GLY A . n A 1 129 ALA 129 128 128 ALA ALA A . n A 1 130 GLU 130 129 129 GLU GLU A . n A 1 131 ILE 131 130 130 ILE ILE A . n A 1 132 LYS 132 131 131 LYS LYS A . n A 1 133 PRO 133 132 132 PRO PRO A . n A 1 134 ILE 134 133 133 ILE ILE A . n A 1 135 ASN 135 134 134 ASN ASN A . n A 1 136 PRO 136 135 135 PRO PRO A . n A 1 137 ARG 137 136 136 ARG ARG A . n A 1 138 ALA 138 137 137 ALA ALA A . n A 1 139 SER 139 138 138 SER SER A . n A 1 140 VAL 140 139 139 VAL VAL A . n A 1 141 ALA 141 140 140 ALA ALA A . n A 1 142 ASN 142 141 141 ASN ASN A . n A 1 143 THR 143 142 142 THR THR A . n A 1 144 ASP 144 143 143 ASP ASP A . n A 1 145 LYS 145 144 144 LYS LYS A . n A 1 146 ALA 146 145 145 ALA ALA A . n A 1 147 LYS 147 146 146 LYS LYS A . n A 1 148 ASN 148 147 147 ASN ASN A . n A 1 149 ASP 149 148 148 ASP ASP A . n A 1 150 ALA 150 149 149 ALA ALA A . n A 1 151 ILE 151 150 150 ILE ILE A . n A 1 152 THR 152 151 151 THR THR A . n A 1 153 TYR 153 152 152 TYR TYR A . n A 1 154 LEU 154 153 153 LEU LEU A . n A 1 155 GLN 155 154 154 GLN GLN A . n A 1 156 VAL 156 155 155 VAL VAL A . n A 1 157 HIS 157 156 156 HIS HIS A . n A 1 158 ASN 158 157 157 ASN ASN A . n A 1 159 ALA 159 158 158 ALA ALA A . n A 1 160 GLY 160 159 159 GLY GLY A . n A 1 161 SER 161 160 160 SER SER A . n A 1 162 VAL 162 161 161 VAL VAL A . n A 1 163 SER 163 162 162 SER SER A . n A 1 164 ALA 164 163 163 ALA ALA A . n A 1 165 ASP 165 164 164 ASP ASP A . n A 1 166 PHE 166 165 165 PHE PHE A . n A 1 167 PRO 167 166 166 PRO PRO A . n A 1 168 ASP 168 167 167 ASP ASP A . n A 1 169 GLY 169 168 168 GLY GLY A . n A 1 170 VAL 170 169 169 VAL VAL A . n A 1 171 SER 171 170 170 SER SER A . n A 1 172 GLY 172 171 171 GLY GLY A . n A 1 173 GLU 173 172 172 GLU GLU A . n A 1 174 GLY 174 173 173 GLY GLY A . n A 1 175 TYR 175 174 174 TYR TYR A . n A 1 176 ILE 176 175 175 ILE ILE A . n A 1 177 PRO 177 176 176 PRO PRO A . n A 1 178 HIS 178 177 177 HIS HIS A . n A 1 179 PRO 179 178 178 PRO PRO A . n A 1 180 LEU 180 179 179 LEU LEU A . n A 1 181 VAL 181 180 180 VAL VAL A . n A 1 182 ARG 182 181 181 ARG ARG A . n A 1 183 VAL 183 182 182 VAL VAL A . n A 1 184 VAL 184 183 183 VAL VAL A . n A 1 185 TYR 185 184 184 TYR TYR A . n A 1 186 GLU 186 185 185 GLU GLU A . n A 1 187 ALA 187 186 186 ALA ALA A . n A 1 188 GLU 188 187 187 GLU GLU A . n A 1 189 ARG 189 188 188 ARG ARG A . n A 1 190 SER 190 189 189 SER SER A . n A 1 191 GLY 191 190 190 GLY GLY A . n A 1 192 LYS 192 191 191 LYS LYS A . n A 1 193 ASN 193 192 192 ASN ASN A . n A 1 194 ASP 194 193 193 ASP ASP A . n A 1 195 TRP 195 194 194 TRP TRP A . n A 1 196 TYR 196 195 195 TYR TYR A . n A 1 197 TRP 197 196 196 TRP TRP A . n A 1 198 ALA 198 197 197 ALA ALA A . n A 1 199 VAL 199 198 198 VAL VAL A . n A 1 200 ILE 200 199 199 ILE ILE A . n A 1 201 LYS 201 200 200 LYS LYS A . n A 1 202 ASN 202 201 201 ASN ASN A . n A 1 203 ASN 203 202 202 ASN ASN A . n A 1 204 ALA 204 203 203 ALA ALA A . n A 1 205 VAL 205 204 204 VAL VAL A . n A 1 206 ASN 206 205 205 ASN ASN A . n A 1 207 CYS 207 206 206 CYS CYS A . n A 1 208 GLY 208 207 207 GLY GLY A . n A 1 209 SER 209 208 208 SER SER A . n A 1 210 LYS 210 209 209 LYS LYS A . n A 1 211 SER 211 210 210 SER SER A . n A 1 212 GLY 212 211 211 GLY GLY A . n A 1 213 ASN 213 212 212 ASN ASN A . n A 1 214 LYS 214 213 213 LYS LYS A . n A 1 215 GLY 215 214 214 GLY GLY A . n A 1 216 THR 216 215 215 THR THR A . n A 1 217 GLU 217 216 216 GLU GLU A . n A 1 218 GLU 218 217 217 GLU GLU A . n A 1 219 CYS 219 218 218 CYS CYS A . n A 1 220 LYS 220 219 219 LYS LYS A . n A 1 221 ASN 221 220 220 ASN ASN A . n A 1 222 ALA 222 221 221 ALA ALA A . n A 1 223 TYR 223 222 222 TYR TYR A . n A 1 224 LEU 224 223 223 LEU LEU A . n A 1 225 LYS 225 224 224 LYS LYS A . n A 1 226 LEU 226 225 225 LEU LEU A . n A 1 227 PRO 227 226 226 PRO PRO A . n A 1 228 ILE 228 227 227 ILE ILE A . n A 1 229 ALA 229 228 228 ALA ALA A . n A 1 230 PRO 230 229 229 PRO PRO A . n A 1 231 ILE 231 230 230 ILE ILE A . n A 1 232 ALA 232 231 231 ALA ALA A . n A 1 233 LYS 233 232 232 LYS LYS A . n A 1 234 GLU 234 233 233 GLU GLU A . n A 1 235 GLY 235 234 234 GLY GLY A . n A 1 236 THR 236 235 235 THR THR A . n A 1 237 ASP 237 236 236 ASP ASP A . n A 1 238 LYS 238 237 237 LYS LYS A . n A 1 239 PHE 239 238 238 PHE PHE A . n A 1 240 ASP 240 239 239 ASP ASP A . n A 1 241 ILE 241 240 240 ILE ILE A . n A 1 242 TYR 242 241 241 TYR TYR A . n A 1 243 VAL 243 242 242 VAL VAL A . n A 1 244 GLY 244 243 243 GLY GLY A . n A 1 245 GLY 245 244 244 GLY GLY A . n A 1 246 ASN 246 245 245 ASN ASN A . n A 1 247 LYS 247 246 246 LYS LYS A . n A 1 248 LEU 248 247 247 LEU LEU A . n A 1 249 ILE 249 248 248 ILE ILE A . n A 1 250 ILE 250 249 249 ILE ILE A . n A 1 251 ASN 251 250 250 ASN ASN A . n A 1 252 HIS 252 251 251 HIS HIS A . n A 1 253 ASN 253 252 252 ASN ASN A . n A 1 254 ASP 254 253 253 ASP ASP A . n A 1 255 LYS 255 254 254 LYS LYS A . n A 1 256 THR 256 255 255 THR THR A . n A 1 257 ALA 257 256 256 ALA ALA A . n A 1 258 ILE 258 257 257 ILE ILE A . n A 1 259 ASN 259 258 258 ASN ASN A . n A 1 260 HIS 260 259 259 HIS HIS A . n A 1 261 ASP 261 260 260 ASP ASP A . n A 1 262 ILE 262 261 261 ILE ILE A . n A 1 263 THR 263 262 262 THR THR A . n A 1 264 TYR 264 263 263 TYR TYR A . n A 1 265 TRP 265 264 264 TRP TRP A . n A 1 266 ASN 266 265 265 ASN ASN A . n A 1 267 GLU 267 266 266 GLU GLU A . n A 1 268 LYS 268 267 267 LYS LYS A . n A 1 269 LYS 269 268 268 LYS LYS A . n A 1 270 SER 270 269 269 SER SER A . n A 1 271 TYR 271 270 270 TYR TYR A . n A 1 272 PHE 272 271 271 PHE PHE A . n A 1 273 LYS 273 272 272 LYS LYS A . n A 1 274 ALA 274 273 273 ALA ALA A . n A 1 275 GLY 275 274 274 GLY GLY A . n A 1 276 VAL 276 275 275 VAL VAL A . n A 1 277 TYR 277 276 276 TYR TYR A . n A 1 278 ASN 278 277 277 ASN ASN A . n A 1 279 GLN 279 278 278 GLN GLN A . n A 1 280 PHE 280 279 279 PHE PHE A . n A 1 281 LYS 281 280 280 LYS LYS A . n A 1 282 ASN 282 281 281 ASN ASN A . n A 1 283 GLY 283 282 282 GLY GLY A . n A 1 284 GLU 284 283 283 GLU GLU A . n A 1 285 SER 285 284 284 SER SER A . n A 1 286 GLU 286 285 285 GLU GLU A . n A 1 287 ALA 287 286 286 ALA ALA A . n A 1 288 HIS 288 287 287 HIS HIS A . n A 1 289 PHE 289 288 288 PHE PHE A . n A 1 290 TYR 290 289 289 TYR TYR A . n A 1 291 LYS 291 290 290 LYS LYS A . n A 1 292 LEU 292 291 291 LEU LEU A . n A 1 293 THR 293 292 292 THR THR A . n A 1 294 TYR 294 293 293 TYR TYR A . n A 1 295 SER 295 294 294 SER SER A . n A 1 296 VAL 296 295 295 VAL VAL A . n A 1 297 GLU 297 296 296 GLU GLU A . n A 1 298 SER 298 297 297 SER SER A . n A 1 299 GLU 299 298 298 GLU GLU A . n A 1 300 PRO 300 299 299 PRO PRO A . n A 1 301 VAL 301 300 300 VAL VAL A . n A 1 302 ILE 302 301 301 ILE ILE A . n A 1 303 ARG 303 302 302 ARG ARG A . n # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 3 liuweizhi@ouc.edu.cn Weizhi Liu ? 'principal investigator/group leader' 0000-0001-9841-1999 4 lyuqianqian@ouc.edu.cn Qianqian Lyu ? 'principal investigator/group leader' 0000-0001-7985-9245 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL 1 401 1 GOL GOL A . D 4 HOH 1 501 87 HOH HOH A . D 4 HOH 2 502 68 HOH HOH A . D 4 HOH 3 503 163 HOH HOH A . D 4 HOH 4 504 15 HOH HOH A . D 4 HOH 5 505 65 HOH HOH A . D 4 HOH 6 506 86 HOH HOH A . D 4 HOH 7 507 36 HOH HOH A . D 4 HOH 8 508 72 HOH HOH A . D 4 HOH 9 509 7 HOH HOH A . D 4 HOH 10 510 91 HOH HOH A . D 4 HOH 11 511 98 HOH HOH A . D 4 HOH 12 512 61 HOH HOH A . D 4 HOH 13 513 1 HOH HOH A . D 4 HOH 14 514 12 HOH HOH A . D 4 HOH 15 515 22 HOH HOH A . D 4 HOH 16 516 4 HOH HOH A . D 4 HOH 17 517 78 HOH HOH A . D 4 HOH 18 518 11 HOH HOH A . D 4 HOH 19 519 64 HOH HOH A . D 4 HOH 20 520 33 HOH HOH A . D 4 HOH 21 521 80 HOH HOH A . D 4 HOH 22 522 81 HOH HOH A . D 4 HOH 23 523 138 HOH HOH A . D 4 HOH 24 524 37 HOH HOH A . D 4 HOH 25 525 56 HOH HOH A . D 4 HOH 26 526 2 HOH HOH A . D 4 HOH 27 527 74 HOH HOH A . D 4 HOH 28 528 26 HOH HOH A . D 4 HOH 29 529 76 HOH HOH A . D 4 HOH 30 530 46 HOH HOH A . D 4 HOH 31 531 119 HOH HOH A . D 4 HOH 32 532 34 HOH HOH A . D 4 HOH 33 533 30 HOH HOH A . D 4 HOH 34 534 88 HOH HOH A . D 4 HOH 35 535 63 HOH HOH A . D 4 HOH 36 536 6 HOH HOH A . D 4 HOH 37 537 130 HOH HOH A . D 4 HOH 38 538 5 HOH HOH A . D 4 HOH 39 539 93 HOH HOH A . D 4 HOH 40 540 110 HOH HOH A . D 4 HOH 41 541 114 HOH HOH A . D 4 HOH 42 542 112 HOH HOH A . D 4 HOH 43 543 47 HOH HOH A . D 4 HOH 44 544 66 HOH HOH A . D 4 HOH 45 545 13 HOH HOH A . D 4 HOH 46 546 39 HOH HOH A . D 4 HOH 47 547 9 HOH HOH A . D 4 HOH 48 548 38 HOH HOH A . D 4 HOH 49 549 106 HOH HOH A . D 4 HOH 50 550 53 HOH HOH A . D 4 HOH 51 551 35 HOH HOH A . D 4 HOH 52 552 103 HOH HOH A . D 4 HOH 53 553 60 HOH HOH A . D 4 HOH 54 554 54 HOH HOH A . D 4 HOH 55 555 17 HOH HOH A . D 4 HOH 56 556 57 HOH HOH A . D 4 HOH 57 557 14 HOH HOH A . D 4 HOH 58 558 31 HOH HOH A . D 4 HOH 59 559 16 HOH HOH A . D 4 HOH 60 560 32 HOH HOH A . D 4 HOH 61 561 120 HOH HOH A . D 4 HOH 62 562 75 HOH HOH A . D 4 HOH 63 563 19 HOH HOH A . D 4 HOH 64 564 10 HOH HOH A . D 4 HOH 65 565 43 HOH HOH A . D 4 HOH 66 566 41 HOH HOH A . D 4 HOH 67 567 23 HOH HOH A . D 4 HOH 68 568 18 HOH HOH A . D 4 HOH 69 569 105 HOH HOH A . D 4 HOH 70 570 62 HOH HOH A . D 4 HOH 71 571 108 HOH HOH A . D 4 HOH 72 572 44 HOH HOH A . D 4 HOH 73 573 51 HOH HOH A . D 4 HOH 74 574 42 HOH HOH A . D 4 HOH 75 575 52 HOH HOH A . D 4 HOH 76 576 20 HOH HOH A . D 4 HOH 77 577 100 HOH HOH A . D 4 HOH 78 578 48 HOH HOH A . D 4 HOH 79 579 8 HOH HOH A . D 4 HOH 80 580 21 HOH HOH A . D 4 HOH 81 581 218 HOH HOH A . D 4 HOH 82 582 59 HOH HOH A . D 4 HOH 83 583 29 HOH HOH A . D 4 HOH 84 584 158 HOH HOH A . D 4 HOH 85 585 71 HOH HOH A . D 4 HOH 86 586 82 HOH HOH A . D 4 HOH 87 587 3 HOH HOH A . D 4 HOH 88 588 128 HOH HOH A . D 4 HOH 89 589 90 HOH HOH A . D 4 HOH 90 590 83 HOH HOH A . D 4 HOH 91 591 24 HOH HOH A . D 4 HOH 92 592 165 HOH HOH A . D 4 HOH 93 593 92 HOH HOH A . D 4 HOH 94 594 45 HOH HOH A . D 4 HOH 95 595 55 HOH HOH A . D 4 HOH 96 596 70 HOH HOH A . D 4 HOH 97 597 99 HOH HOH A . D 4 HOH 98 598 107 HOH HOH A . D 4 HOH 99 599 123 HOH HOH A . D 4 HOH 100 600 28 HOH HOH A . D 4 HOH 101 601 160 HOH HOH A . D 4 HOH 102 602 25 HOH HOH A . D 4 HOH 103 603 49 HOH HOH A . D 4 HOH 104 604 97 HOH HOH A . D 4 HOH 105 605 79 HOH HOH A . D 4 HOH 106 606 124 HOH HOH A . D 4 HOH 107 607 50 HOH HOH A . D 4 HOH 108 608 85 HOH HOH A . D 4 HOH 109 609 27 HOH HOH A . D 4 HOH 110 610 121 HOH HOH A . D 4 HOH 111 611 111 HOH HOH A . D 4 HOH 112 612 217 HOH HOH A . D 4 HOH 113 613 102 HOH HOH A . D 4 HOH 114 614 84 HOH HOH A . D 4 HOH 115 615 67 HOH HOH A . D 4 HOH 116 616 95 HOH HOH A . D 4 HOH 117 617 96 HOH HOH A . D 4 HOH 118 618 122 HOH HOH A . D 4 HOH 119 619 159 HOH HOH A . D 4 HOH 120 620 129 HOH HOH A . D 4 HOH 121 621 73 HOH HOH A . D 4 HOH 122 622 89 HOH HOH A . D 4 HOH 123 623 40 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 980 ? 1 MORE 10 ? 1 'SSA (A^2)' 11780 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 596 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2022-08-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0049 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _pdbx_entry_details.entry_id 7W16 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OE2 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 GLU _pdbx_validate_symm_contact.auth_seq_id_1 233 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 OH _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 TYR _pdbx_validate_symm_contact.auth_seq_id_2 289 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_465 _pdbx_validate_symm_contact.dist 1.93 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 87 ? ? -162.59 109.62 2 1 ASP A 121 ? ? 49.16 25.82 3 1 PRO A 176 ? ? -85.21 47.86 4 1 GLN A 278 ? ? -110.37 50.81 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 39 ? CG ? A ASP 40 CG 2 1 Y 1 A ASP 39 ? OD1 ? A ASP 40 OD1 3 1 Y 1 A ASP 39 ? OD2 ? A ASP 40 OD2 4 1 Y 1 A GLU 47 ? CG ? A GLU 48 CG 5 1 Y 1 A GLU 47 ? CD ? A GLU 48 CD 6 1 Y 1 A GLU 47 ? OE1 ? A GLU 48 OE1 7 1 Y 1 A GLU 47 ? OE2 ? A GLU 48 OE2 8 1 Y 1 A ASP 164 ? CG ? A ASP 165 CG 9 1 Y 1 A ASP 164 ? OD1 ? A ASP 165 OD1 10 1 Y 1 A ASP 164 ? OD2 ? A ASP 165 OD2 11 1 Y 1 A LYS 209 ? CG ? A LYS 210 CG 12 1 Y 1 A LYS 209 ? CD ? A LYS 210 CD 13 1 Y 1 A LYS 209 ? CE ? A LYS 210 CE 14 1 Y 1 A LYS 209 ? NZ ? A LYS 210 NZ 15 1 Y 1 A LYS 254 ? CG ? A LYS 255 CG 16 1 Y 1 A LYS 254 ? CD ? A LYS 255 CD 17 1 Y 1 A LYS 254 ? CE ? A LYS 255 CE 18 1 Y 1 A LYS 254 ? NZ ? A LYS 255 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 0 ? A MET 1 2 1 Y 1 A GLY 1 ? A GLY 2 3 1 Y 1 A SER 2 ? A SER 3 4 1 Y 1 A SER 3 ? A SER 4 5 1 Y 1 A HIS 4 ? A HIS 5 6 1 Y 1 A HIS 5 ? A HIS 6 7 1 Y 1 A HIS 6 ? A HIS 7 8 1 Y 1 A HIS 7 ? A HIS 8 9 1 Y 1 A HIS 8 ? A HIS 9 10 1 Y 1 A HIS 9 ? A HIS 10 11 1 Y 1 A SER 10 ? A SER 11 12 1 Y 1 A SER 11 ? A SER 12 13 1 Y 1 A GLY 12 ? A GLY 13 14 1 Y 1 A LEU 13 ? A LEU 14 15 1 Y 1 A VAL 14 ? A VAL 15 16 1 Y 1 A PRO 15 ? A PRO 16 17 1 Y 1 A ARG 16 ? A ARG 17 18 1 Y 1 A GLY 17 ? A GLY 18 19 1 Y 1 A SER 18 ? A SER 19 20 1 Y 1 A HIS 19 ? A HIS 20 21 1 Y 1 A MET 20 ? A MET 21 22 1 Y 1 A ALA 21 ? A ALA 22 23 1 Y 1 A SER 22 ? A SER 23 24 1 Y 1 A MET 23 ? A MET 24 25 1 Y 1 A THR 24 ? A THR 25 26 1 Y 1 A GLY 25 ? A GLY 26 27 1 Y 1 A GLY 26 ? A GLY 27 28 1 Y 1 A GLN 27 ? A GLN 28 29 1 Y 1 A GLN 28 ? A GLN 29 30 1 Y 1 A MET 29 ? A MET 30 31 1 Y 1 A GLY 30 ? A GLY 31 32 1 Y 1 A ARG 31 ? A ARG 32 33 1 Y 1 A GLY 32 ? A GLY 33 34 1 Y 1 A SER 33 ? A SER 34 35 1 Y 1 A MET 34 ? A MET 35 36 1 Y 1 A ALA 35 ? A ALA 36 37 1 Y 1 A ASN 36 ? A ASN 37 38 1 Y 1 A ALA 37 ? A ALA 38 39 1 Y 1 A SER 38 ? A SER 39 # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 BEM 1 B BEM 1 B BEM 1 n B 2 BEM 2 B BEM 2 B BEM 2 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BEM 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpAb BEM 'COMMON NAME' GMML 1.0 'b-D-mannopyranuronic acid' BEM 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-ManpA BEM 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 ManA # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DManpAb1-4DManpAb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,2,1/[a1122A-1b_1-5]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-ManpA]{[(4+1)][b-D-ManpA]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 BEM _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 BEM _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 BEM 1 n 2 BEM 2 n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id BEM _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id BEM _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 GLYCEROL GOL 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #