HEADER TRANSFERASE 06-DEC-21 7W7X TITLE THE CRYSTAL STRUCTURE OF HUMAN ABL1 KINASE DOMAIN IN COMPLEX WITH TITLE 2 ABL1-A11 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE ABL1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ABELSON MURINE LEUKEMIA VIRAL ONCOGENE HOMOLOG 1,ABELSON COMPND 5 TYROSINE-PROTEIN KINASE 1; COMPND 6 EC: 2.7.10.2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ABL1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ABL1, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.ZHU,Z.M.ZHANG REVDAT 4 29-NOV-23 7W7X 1 REMARK REVDAT 3 29-JUN-22 7W7X 1 JRNL REVDAT 2 11-MAY-22 7W7X 1 JRNL REVDAT 1 27-APR-22 7W7X 0 JRNL AUTH P.CHEN,J.SUN,C.ZHU,G.TANG,W.WANG,M.XU,M.XIANG,C.J.ZHANG, JRNL AUTH 2 Z.M.ZHANG,L.GAO,S.Q.YAO JRNL TITL CELL-ACTIVE, REVERSIBLE, AND IRREVERSIBLE COVALENT JRNL TITL 2 INHIBITORS THAT SELECTIVELY TARGET THE CATALYTIC LYSINE OF JRNL TITL 3 BCR-ABL KINASE. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 61 03878 2022 JRNL REFN ESSN 1521-3773 JRNL PMID 35438229 JRNL DOI 10.1002/ANIE.202203878 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692+SVN REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.364 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 54035 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.677 REMARK 3 FREE R VALUE TEST SET COUNT : 1987 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.2360 - 4.8121 0.99 3910 150 0.1752 0.1920 REMARK 3 2 4.8121 - 3.8229 1.00 3802 145 0.1448 0.1573 REMARK 3 3 3.8229 - 3.3406 1.00 3749 144 0.1517 0.1711 REMARK 3 4 3.3406 - 3.0356 1.00 3736 142 0.1751 0.2113 REMARK 3 5 3.0356 - 2.8183 1.00 3700 142 0.1772 0.2027 REMARK 3 6 2.8183 - 2.6522 1.00 3723 141 0.1740 0.2090 REMARK 3 7 2.6522 - 2.5195 1.00 3704 141 0.1787 0.1983 REMARK 3 8 2.5195 - 2.4099 1.00 3690 141 0.1727 0.2083 REMARK 3 9 2.4099 - 2.3172 1.00 3687 141 0.1739 0.1903 REMARK 3 10 2.3172 - 2.2373 1.00 3649 140 0.1736 0.2189 REMARK 3 11 2.2373 - 2.1673 1.00 3678 140 0.1747 0.2309 REMARK 3 12 2.1673 - 2.1054 1.00 3689 140 0.1781 0.2031 REMARK 3 13 2.1054 - 2.0500 1.00 3660 140 0.1985 0.2891 REMARK 3 14 2.0500 - 2.0000 1.00 3671 140 0.2010 0.2442 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.168 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.053 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4427 REMARK 3 ANGLE : 1.168 6017 REMARK 3 CHIRALITY : 0.055 636 REMARK 3 PLANARITY : 0.006 755 REMARK 3 DIHEDRAL : 17.195 1607 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 232:247 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.891 23.417 20.547 REMARK 3 T TENSOR REMARK 3 T11: 0.3075 T22: 0.3993 REMARK 3 T33: 0.5620 T12: 0.0265 REMARK 3 T13: 0.0491 T23: -0.1504 REMARK 3 L TENSOR REMARK 3 L11: 6.5476 L22: 3.0761 REMARK 3 L33: 4.9652 L12: 1.6142 REMARK 3 L13: -1.1299 L23: -1.7950 REMARK 3 S TENSOR REMARK 3 S11: 0.2904 S12: -0.4178 S13: 0.3666 REMARK 3 S21: 0.6358 S22: -0.5573 S23: 0.4705 REMARK 3 S31: -0.1674 S32: -0.4850 S33: 0.2601 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 248:264 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.629 15.615 17.517 REMARK 3 T TENSOR REMARK 3 T11: 0.2668 T22: 0.4326 REMARK 3 T33: 0.3573 T12: -0.0050 REMARK 3 T13: 0.0334 T23: -0.0986 REMARK 3 L TENSOR REMARK 3 L11: 5.5386 L22: 4.0360 REMARK 3 L33: 4.5528 L12: -1.0177 REMARK 3 L13: 0.9390 L23: -0.8118 REMARK 3 S TENSOR REMARK 3 S11: 0.2404 S12: 0.0212 S13: -0.3639 REMARK 3 S21: 0.1315 S22: -0.0825 S23: 0.2670 REMARK 3 S31: 0.3466 S32: -0.0410 S33: -0.1059 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 265:292 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.760 24.559 22.857 REMARK 3 T TENSOR REMARK 3 T11: 0.2171 T22: 0.2727 REMARK 3 T33: 0.2317 T12: 0.0308 REMARK 3 T13: 0.0214 T23: -0.0769 REMARK 3 L TENSOR REMARK 3 L11: 4.0830 L22: 4.4979 REMARK 3 L33: 3.9491 L12: 2.5283 REMARK 3 L13: 0.7974 L23: 1.9813 REMARK 3 S TENSOR REMARK 3 S11: 0.2225 S12: -0.2497 S13: -0.1285 REMARK 3 S21: 0.3393 S22: -0.1573 S23: -0.0787 REMARK 3 S31: -0.0824 S32: -0.2852 S33: -0.0945 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 293:379 ) REMARK 3 ORIGIN FOR THE GROUP (A): 65.650 18.886 8.502 REMARK 3 T TENSOR REMARK 3 T11: 0.1521 T22: 0.1725 REMARK 3 T33: 0.1896 T12: 0.0162 REMARK 3 T13: -0.0134 T23: -0.0306 REMARK 3 L TENSOR REMARK 3 L11: 1.4626 L22: 1.8561 REMARK 3 L33: 1.7519 L12: 0.1190 REMARK 3 L13: -0.1109 L23: 0.8023 REMARK 3 S TENSOR REMARK 3 S11: 0.0437 S12: -0.0617 S13: 0.2236 REMARK 3 S21: -0.0337 S22: -0.1227 S23: 0.1865 REMARK 3 S31: -0.1024 S32: -0.2196 S33: 0.0744 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 380:453 ) REMARK 3 ORIGIN FOR THE GROUP (A): 81.569 17.806 16.909 REMARK 3 T TENSOR REMARK 3 T11: 0.1852 T22: 0.2033 REMARK 3 T33: 0.1890 T12: -0.0128 REMARK 3 T13: 0.0032 T23: -0.0315 REMARK 3 L TENSOR REMARK 3 L11: 2.2394 L22: 2.0711 REMARK 3 L33: 2.1600 L12: -0.8006 REMARK 3 L13: 0.1506 L23: 0.2736 REMARK 3 S TENSOR REMARK 3 S11: -0.0022 S12: -0.2579 S13: 0.2522 REMARK 3 S21: 0.2829 S22: 0.0136 S23: -0.1668 REMARK 3 S31: 0.0027 S32: 0.1388 S33: -0.0210 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 454:485 ) REMARK 3 ORIGIN FOR THE GROUP (A): 88.200 16.001 5.130 REMARK 3 T TENSOR REMARK 3 T11: 0.2019 T22: 0.2778 REMARK 3 T33: 0.2461 T12: 0.0076 REMARK 3 T13: 0.0853 T23: -0.0179 REMARK 3 L TENSOR REMARK 3 L11: 3.3139 L22: 3.7583 REMARK 3 L33: 3.3954 L12: -0.1420 REMARK 3 L13: 1.1256 L23: 1.0413 REMARK 3 S TENSOR REMARK 3 S11: -0.0151 S12: 0.2863 S13: 0.1099 REMARK 3 S21: -0.2552 S22: 0.1249 S23: -0.2807 REMARK 3 S31: 0.0127 S32: 0.4432 S33: -0.1453 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 486:500 ) REMARK 3 ORIGIN FOR THE GROUP (A): 77.132 23.694 -4.329 REMARK 3 T TENSOR REMARK 3 T11: 0.3492 T22: 0.2804 REMARK 3 T33: 0.2631 T12: -0.0017 REMARK 3 T13: 0.0332 T23: 0.0756 REMARK 3 L TENSOR REMARK 3 L11: 7.8950 L22: 8.3373 REMARK 3 L33: 8.8178 L12: 0.4379 REMARK 3 L13: 1.0024 L23: 3.1409 REMARK 3 S TENSOR REMARK 3 S11: -0.1008 S12: 0.8913 S13: 0.3201 REMARK 3 S21: -1.3057 S22: 0.0698 S23: -0.3006 REMARK 3 S31: -0.8774 S32: -0.1815 S33: -0.0538 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN B AND RESID 232:248 ) REMARK 3 ORIGIN FOR THE GROUP (A): 67.099 11.055 56.628 REMARK 3 T TENSOR REMARK 3 T11: 0.8321 T22: 0.4525 REMARK 3 T33: 0.8469 T12: 0.0559 REMARK 3 T13: 0.1026 T23: 0.1976 REMARK 3 L TENSOR REMARK 3 L11: 4.4662 L22: 4.6658 REMARK 3 L33: 1.9870 L12: -0.5677 REMARK 3 L13: -0.1235 L23: -1.0780 REMARK 3 S TENSOR REMARK 3 S11: -0.4100 S12: -1.0525 S13: -1.2835 REMARK 3 S21: 0.1357 S22: 0.1558 S23: 0.2247 REMARK 3 S31: 1.0885 S32: 0.1781 S33: 0.4185 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN B AND RESID 249:265 ) REMARK 3 ORIGIN FOR THE GROUP (A): 73.758 15.488 53.638 REMARK 3 T TENSOR REMARK 3 T11: 0.7011 T22: 0.4430 REMARK 3 T33: 0.5577 T12: 0.1448 REMARK 3 T13: -0.0280 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 4.7927 L22: 8.7038 REMARK 3 L33: 3.3814 L12: 1.6110 REMARK 3 L13: -1.5588 L23: -0.0030 REMARK 3 S TENSOR REMARK 3 S11: -0.3557 S12: -0.3873 S13: -0.8394 REMARK 3 S21: 0.2332 S22: -0.1010 S23: 0.2801 REMARK 3 S31: 0.7918 S32: 0.3139 S33: 0.3621 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: ( CHAIN B AND RESID 266:292 ) REMARK 3 ORIGIN FOR THE GROUP (A): 63.154 20.697 58.571 REMARK 3 T TENSOR REMARK 3 T11: 0.6534 T22: 0.3676 REMARK 3 T33: 0.4034 T12: 0.0604 REMARK 3 T13: 0.1085 T23: 0.0977 REMARK 3 L TENSOR REMARK 3 L11: 7.5416 L22: 4.2252 REMARK 3 L33: 4.1977 L12: -1.7013 REMARK 3 L13: 1.9372 L23: -0.1406 REMARK 3 S TENSOR REMARK 3 S11: -0.4305 S12: -1.0720 S13: -0.4674 REMARK 3 S21: 0.7324 S22: 0.2874 S23: 0.1559 REMARK 3 S31: 0.3615 S32: -0.3203 S33: 0.1941 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: ( CHAIN B AND RESID 293:336 ) REMARK 3 ORIGIN FOR THE GROUP (A): 71.569 23.281 46.884 REMARK 3 T TENSOR REMARK 3 T11: 0.4497 T22: 0.3166 REMARK 3 T33: 0.3528 T12: 0.0371 REMARK 3 T13: 0.0009 T23: -0.0690 REMARK 3 L TENSOR REMARK 3 L11: 3.3174 L22: 3.2005 REMARK 3 L33: 2.3617 L12: 0.6904 REMARK 3 L13: -0.9806 L23: -0.9528 REMARK 3 S TENSOR REMARK 3 S11: -0.2184 S12: -0.3597 S13: -0.4336 REMARK 3 S21: 0.2893 S22: 0.1111 S23: -0.1512 REMARK 3 S31: 0.5853 S32: 0.2328 S33: 0.0856 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: ( CHAIN B AND RESID 337:356 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.366 33.249 38.791 REMARK 3 T TENSOR REMARK 3 T11: 0.2749 T22: 0.2713 REMARK 3 T33: 0.3018 T12: -0.0691 REMARK 3 T13: 0.0001 T23: -0.0968 REMARK 3 L TENSOR REMARK 3 L11: 5.3988 L22: 2.0866 REMARK 3 L33: 5.4857 L12: 0.2985 REMARK 3 L13: -4.3041 L23: 0.2846 REMARK 3 S TENSOR REMARK 3 S11: -0.1263 S12: 0.0114 S13: -0.1903 REMARK 3 S21: 0.0101 S22: -0.0735 S23: 0.1756 REMARK 3 S31: 0.3068 S32: -0.2475 S33: 0.1024 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: ( CHAIN B AND RESID 357:379 ) REMARK 3 ORIGIN FOR THE GROUP (A): 67.279 29.923 46.366 REMARK 3 T TENSOR REMARK 3 T11: 0.3264 T22: 0.2443 REMARK 3 T33: 0.2451 T12: -0.0238 REMARK 3 T13: -0.0028 T23: -0.0467 REMARK 3 L TENSOR REMARK 3 L11: 7.9324 L22: 3.1288 REMARK 3 L33: 3.8344 L12: -1.0731 REMARK 3 L13: -2.2785 L23: 0.4652 REMARK 3 S TENSOR REMARK 3 S11: -0.1806 S12: -0.3263 S13: -0.2622 REMARK 3 S21: 0.2494 S22: 0.0773 S23: 0.1059 REMARK 3 S31: 0.3092 S32: 0.0585 S33: 0.1237 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: ( CHAIN B AND RESID 380:400 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.950 35.125 58.748 REMARK 3 T TENSOR REMARK 3 T11: 0.3534 T22: 0.3634 REMARK 3 T33: 0.2465 T12: 0.0121 REMARK 3 T13: 0.0860 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 6.3909 L22: 3.9624 REMARK 3 L33: 0.3656 L12: -2.6426 REMARK 3 L13: -1.4246 L23: 0.8098 REMARK 3 S TENSOR REMARK 3 S11: -0.2739 S12: -0.5880 S13: -0.3507 REMARK 3 S21: 0.5698 S22: 0.1170 S23: 0.0319 REMARK 3 S31: 0.4561 S32: 0.1603 S33: 0.0626 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: ( CHAIN B AND RESID 401:433 ) REMARK 3 ORIGIN FOR THE GROUP (A): 67.099 43.312 51.680 REMARK 3 T TENSOR REMARK 3 T11: 0.2466 T22: 0.3259 REMARK 3 T33: 0.2390 T12: -0.0706 REMARK 3 T13: 0.0377 T23: -0.1210 REMARK 3 L TENSOR REMARK 3 L11: 3.5896 L22: 2.3490 REMARK 3 L33: 1.3375 L12: 0.2985 REMARK 3 L13: -0.5267 L23: -0.4435 REMARK 3 S TENSOR REMARK 3 S11: 0.1462 S12: -0.4516 S13: -0.0500 REMARK 3 S21: 0.2838 S22: -0.0956 S23: 0.1181 REMARK 3 S31: 0.0000 S32: 0.0280 S33: -0.0243 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: ( CHAIN B AND RESID 434:453 ) REMARK 3 ORIGIN FOR THE GROUP (A): 76.941 49.139 51.881 REMARK 3 T TENSOR REMARK 3 T11: 0.3282 T22: 0.3864 REMARK 3 T33: 0.2740 T12: -0.1622 REMARK 3 T13: 0.0423 T23: -0.0911 REMARK 3 L TENSOR REMARK 3 L11: 1.9197 L22: 7.6376 REMARK 3 L33: 4.7304 L12: -1.5623 REMARK 3 L13: -1.7829 L23: 4.2031 REMARK 3 S TENSOR REMARK 3 S11: 0.1556 S12: -0.2563 S13: 0.0528 REMARK 3 S21: 0.8432 S22: -0.2357 S23: -0.0730 REMARK 3 S31: 0.1836 S32: 0.1956 S33: -0.0326 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: ( CHAIN B AND RESID 454:500 ) REMARK 3 ORIGIN FOR THE GROUP (A): 66.820 46.281 38.923 REMARK 3 T TENSOR REMARK 3 T11: 0.2046 T22: 0.2543 REMARK 3 T33: 0.2890 T12: -0.0259 REMARK 3 T13: 0.0227 T23: -0.0689 REMARK 3 L TENSOR REMARK 3 L11: 1.1166 L22: 2.9978 REMARK 3 L33: 2.5340 L12: 1.2355 REMARK 3 L13: 1.0076 L23: 1.1939 REMARK 3 S TENSOR REMARK 3 S11: 0.0473 S12: 0.0132 S13: 0.2458 REMARK 3 S21: -0.1629 S22: -0.1115 S23: 0.2182 REMARK 3 S31: -0.0332 S32: 0.0136 S33: 0.0533 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN 'A' REMARK 3 SELECTION : CHAIN 'B' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7W7X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1300026169. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-OCT-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9876 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : APEX II CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54422 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.00 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2GQG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0 M (NH4)2SO4 AND 0.1 M HEPES (PH REMARK 280 7.0)., VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.43900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.45300 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.43900 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 66.45300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 894 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 229 REMARK 465 PRO A 230 REMARK 465 ASN A 231 REMARK 465 ASP A 276 REMARK 465 THR A 277 REMARK 465 SER B 229 REMARK 465 PRO B 230 REMARK 465 ASN B 231 REMARK 465 LYS B 274 REMARK 465 GLU B 275 REMARK 465 ASP B 276 REMARK 465 THR B 277 REMARK 465 MET B 278 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 232 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 234 CG CD CE NZ REMARK 470 LYS A 247 CG CD CE NZ REMARK 470 LYS A 274 CG CD CE NZ REMARK 470 GLU A 275 CG CD OE1 OE2 REMARK 470 ARG A 307 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 308 CG CD OE1 OE2 REMARK 470 TYR B 232 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP B 233 CG OD1 OD2 REMARK 470 LYS B 234 CG CD CE NZ REMARK 470 GLU B 238 CG CD OE1 OE2 REMARK 470 ARG B 239 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 245 CG CD CE NZ REMARK 470 HIS B 246 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 247 CG CD CE NZ REMARK 470 LYS B 262 CG CD CE NZ REMARK 470 GLU B 279 CG CD OE1 OE2 REMARK 470 GLU B 282 CG CD OE1 OE2 REMARK 470 THR B 306 OG1 CG2 REMARK 470 ARG B 307 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 308 CG CD OE1 OE2 REMARK 470 LYS B 400 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 846 O HOH B 880 1.81 REMARK 500 OG1 THR A 319 O HOH A 701 1.95 REMARK 500 O HOH B 712 O HOH B 845 1.99 REMARK 500 N GLY A 398 O HOH A 702 2.05 REMARK 500 OH TYR A 257 O HOH A 703 2.07 REMARK 500 O HOH A 919 O HOH B 829 2.08 REMARK 500 O HOH A 809 O HOH A 855 2.11 REMARK 500 O HOH B 817 O HOH B 871 2.13 REMARK 500 O3P PTR B 393 O HOH B 701 2.14 REMARK 500 O HOH A 799 O HOH A 925 2.14 REMARK 500 SD MET A 351 O HOH A 896 2.15 REMARK 500 OE1 GLU A 450 O HOH A 704 2.17 REMARK 500 O HOH A 864 O HOH A 920 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 958 O HOH B 885 4754 1.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 245 -137.50 -115.56 REMARK 500 LYS A 274 -61.69 -96.43 REMARK 500 ARG A 362 -0.83 76.52 REMARK 500 ASP A 363 47.86 -146.99 REMARK 500 LEU A 387 117.02 -161.46 REMARK 500 LYS B 245 -137.67 -117.71 REMARK 500 ARG B 362 -0.49 74.93 REMARK 500 ASP B 363 48.34 -145.55 REMARK 500 THR B 389 -65.46 -133.92 REMARK 500 REMARK 500 REMARK: NULL DBREF 7W7X A 229 500 UNP P00519 ABL1_HUMAN 229 500 DBREF 7W7X B 229 500 UNP P00519 ABL1_HUMAN 229 500 SEQRES 1 A 272 SER PRO ASN TYR ASP LYS TRP GLU MET GLU ARG THR ASP SEQRES 2 A 272 ILE THR MET LYS HIS LYS LEU GLY GLY GLY GLN TYR GLY SEQRES 3 A 272 GLU VAL TYR GLU GLY VAL TRP LYS LYS TYR SER LEU THR SEQRES 4 A 272 VAL ALA VAL LYS THR LEU LYS GLU ASP THR MET GLU VAL SEQRES 5 A 272 GLU GLU PHE LEU LYS GLU ALA ALA VAL MET LYS GLU ILE SEQRES 6 A 272 LYS HIS PRO ASN LEU VAL GLN LEU LEU GLY VAL CYS THR SEQRES 7 A 272 ARG GLU PRO PRO PHE TYR ILE ILE THR GLU PHE MET THR SEQRES 8 A 272 TYR GLY ASN LEU LEU ASP TYR LEU ARG GLU CYS ASN ARG SEQRES 9 A 272 GLN GLU VAL ASN ALA VAL VAL LEU LEU TYR MET ALA THR SEQRES 10 A 272 GLN ILE SER SER ALA MET GLU TYR LEU GLU LYS LYS ASN SEQRES 11 A 272 PHE ILE HIS ARG ASP LEU ALA ALA ARG ASN CYS LEU VAL SEQRES 12 A 272 GLY GLU ASN HIS LEU VAL LYS VAL ALA ASP PHE GLY LEU SEQRES 13 A 272 SER ARG LEU MET THR GLY ASP THR PTR THR ALA HIS ALA SEQRES 14 A 272 GLY ALA LYS PHE PRO ILE LYS TRP THR ALA PRO GLU SER SEQRES 15 A 272 LEU ALA TYR ASN LYS PHE SER ILE LYS SER ASP VAL TRP SEQRES 16 A 272 ALA PHE GLY VAL LEU LEU TRP GLU ILE ALA THR TYR GLY SEQRES 17 A 272 MET SER PRO TYR PRO GLY ILE ASP LEU SER GLN VAL TYR SEQRES 18 A 272 GLU LEU LEU GLU LYS ASP TYR ARG MET GLU ARG PRO GLU SEQRES 19 A 272 GLY CYS PRO GLU LYS VAL TYR GLU LEU MET ARG ALA CYS SEQRES 20 A 272 TRP GLN TRP ASN PRO SER ASP ARG PRO SER PHE ALA GLU SEQRES 21 A 272 ILE HIS GLN ALA PHE GLU THR MET PHE GLN GLU SER SEQRES 1 B 272 SER PRO ASN TYR ASP LYS TRP GLU MET GLU ARG THR ASP SEQRES 2 B 272 ILE THR MET LYS HIS LYS LEU GLY GLY GLY GLN TYR GLY SEQRES 3 B 272 GLU VAL TYR GLU GLY VAL TRP LYS LYS TYR SER LEU THR SEQRES 4 B 272 VAL ALA VAL LYS THR LEU LYS GLU ASP THR MET GLU VAL SEQRES 5 B 272 GLU GLU PHE LEU LYS GLU ALA ALA VAL MET LYS GLU ILE SEQRES 6 B 272 LYS HIS PRO ASN LEU VAL GLN LEU LEU GLY VAL CYS THR SEQRES 7 B 272 ARG GLU PRO PRO PHE TYR ILE ILE THR GLU PHE MET THR SEQRES 8 B 272 TYR GLY ASN LEU LEU ASP TYR LEU ARG GLU CYS ASN ARG SEQRES 9 B 272 GLN GLU VAL ASN ALA VAL VAL LEU LEU TYR MET ALA THR SEQRES 10 B 272 GLN ILE SER SER ALA MET GLU TYR LEU GLU LYS LYS ASN SEQRES 11 B 272 PHE ILE HIS ARG ASP LEU ALA ALA ARG ASN CYS LEU VAL SEQRES 12 B 272 GLY GLU ASN HIS LEU VAL LYS VAL ALA ASP PHE GLY LEU SEQRES 13 B 272 SER ARG LEU MET THR GLY ASP THR PTR THR ALA HIS ALA SEQRES 14 B 272 GLY ALA LYS PHE PRO ILE LYS TRP THR ALA PRO GLU SER SEQRES 15 B 272 LEU ALA TYR ASN LYS PHE SER ILE LYS SER ASP VAL TRP SEQRES 16 B 272 ALA PHE GLY VAL LEU LEU TRP GLU ILE ALA THR TYR GLY SEQRES 17 B 272 MET SER PRO TYR PRO GLY ILE ASP LEU SER GLN VAL TYR SEQRES 18 B 272 GLU LEU LEU GLU LYS ASP TYR ARG MET GLU ARG PRO GLU SEQRES 19 B 272 GLY CYS PRO GLU LYS VAL TYR GLU LEU MET ARG ALA CYS SEQRES 20 B 272 TRP GLN TRP ASN PRO SER ASP ARG PRO SER PHE ALA GLU SEQRES 21 B 272 ILE HIS GLN ALA PHE GLU THR MET PHE GLN GLU SER MODRES 7W7X PTR A 393 TYR MODIFIED RESIDUE MODRES 7W7X PTR B 393 TYR MODIFIED RESIDUE HET PTR A 393 16 HET PTR B 393 16 HET 8DW A 601 33 HET 8DW B 601 33 HETNAM PTR O-PHOSPHOTYROSINE HETNAM 8DW 5-[5-(DIMETHYLCARBAMOYL)PYRIDIN-3-YL]-3-(5- HETNAM 2 8DW FLUOROSULFONYLOXY-2-METHOXY-PHENYL)-1H-PYRROLO[2,3- HETNAM 3 8DW B]PYRIDINE HETSYN PTR PHOSPHONOTYROSINE FORMUL 1 PTR 2(C9 H12 N O6 P) FORMUL 3 8DW 2(C22 H19 F N4 O5 S) FORMUL 5 HOH *454(H2 O) HELIX 1 AA1 GLU A 238 THR A 240 5 3 HELIX 2 AA2 GLY A 249 GLN A 252 5 4 HELIX 3 AA3 LYS A 263 SER A 265 5 3 HELIX 4 AA4 GLU A 279 GLU A 292 1 14 HELIX 5 AA5 ASN A 322 CYS A 330 1 9 HELIX 6 AA6 ASN A 336 LYS A 357 1 22 HELIX 7 AA7 ALA A 365 ARG A 367 5 3 HELIX 8 AA8 GLU A 373 HIS A 375 5 3 HELIX 9 AA9 PRO A 402 THR A 406 5 5 HELIX 10 AB1 ALA A 407 ASN A 414 1 8 HELIX 11 AB2 SER A 417 THR A 434 1 18 HELIX 12 AB3 ASP A 444 SER A 446 5 3 HELIX 13 AB4 GLN A 447 LYS A 454 1 8 HELIX 14 AB5 PRO A 465 TRP A 476 1 12 HELIX 15 AB6 ASN A 479 ARG A 483 5 5 HELIX 16 AB7 SER A 485 GLU A 499 1 15 HELIX 17 AB8 TYR B 232 GLU B 236 5 5 HELIX 18 AB9 GLU B 238 THR B 240 5 3 HELIX 19 AC1 GLY B 249 GLN B 252 5 4 HELIX 20 AC2 VAL B 280 ILE B 293 1 14 HELIX 21 AC3 ASN B 322 CYS B 330 1 9 HELIX 22 AC4 ASN B 336 LYS B 357 1 22 HELIX 23 AC5 ALA B 365 ARG B 367 5 3 HELIX 24 AC6 GLU B 373 HIS B 375 5 3 HELIX 25 AC7 PRO B 402 THR B 406 5 5 HELIX 26 AC8 ALA B 407 ASN B 414 1 8 HELIX 27 AC9 SER B 417 THR B 434 1 18 HELIX 28 AD1 ASP B 444 LYS B 454 1 11 HELIX 29 AD2 PRO B 465 TRP B 476 1 12 HELIX 30 AD3 ASN B 479 ARG B 483 5 5 HELIX 31 AD4 SER B 485 SER B 500 1 16 SHEET 1 AA1 5 ILE A 242 LYS A 247 0 SHEET 2 AA1 5 VAL A 256 TRP A 261 -1 O GLU A 258 N LYS A 245 SHEET 3 AA1 5 LEU A 266 THR A 272 -1 O VAL A 270 N TYR A 257 SHEET 4 AA1 5 TYR A 312 GLU A 316 -1 O ILE A 313 N LYS A 271 SHEET 5 AA1 5 LEU A 301 CYS A 305 -1 N LEU A 302 O ILE A 314 SHEET 1 AA2 2 PHE A 359 ILE A 360 0 SHEET 2 AA2 2 SER A 385 ARG A 386 -1 O SER A 385 N ILE A 360 SHEET 1 AA3 2 CYS A 369 VAL A 371 0 SHEET 2 AA3 2 VAL A 377 VAL A 379 -1 O LYS A 378 N LEU A 370 SHEET 1 AA4 2 PTR A 393 THR A 394 0 SHEET 2 AA4 2 LYS A 415 PHE A 416 -1 O PHE A 416 N PTR A 393 SHEET 1 AA5 5 ILE B 242 LYS B 247 0 SHEET 2 AA5 5 VAL B 256 TRP B 261 -1 O GLU B 258 N HIS B 246 SHEET 3 AA5 5 LEU B 266 LEU B 273 -1 O LEU B 266 N TRP B 261 SHEET 4 AA5 5 PHE B 311 GLU B 316 -1 O THR B 315 N ALA B 269 SHEET 5 AA5 5 LEU B 301 CYS B 305 -1 N LEU B 302 O ILE B 314 SHEET 1 AA6 2 PHE B 359 ILE B 360 0 SHEET 2 AA6 2 SER B 385 ARG B 386 -1 O SER B 385 N ILE B 360 SHEET 1 AA7 2 CYS B 369 VAL B 371 0 SHEET 2 AA7 2 VAL B 377 VAL B 379 -1 O LYS B 378 N LEU B 370 SHEET 1 AA8 2 PTR B 393 THR B 394 0 SHEET 2 AA8 2 LYS B 415 PHE B 416 -1 O PHE B 416 N PTR B 393 LINK C THR A 392 N PTR A 393 1555 1555 1.33 LINK C PTR A 393 N THR A 394 1555 1555 1.33 LINK C THR B 392 N PTR B 393 1555 1555 1.33 LINK C PTR B 393 N THR B 394 1555 1555 1.32 CISPEP 1 PRO A 309 PRO A 310 0 -2.86 CISPEP 2 PRO B 309 PRO B 310 0 0.30 CRYST1 56.408 104.878 132.906 90.00 90.00 90.00 P 2 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017728 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009535 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007524 0.00000