data_7Y7K # _entry.id 7Y7K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7Y7K pdb_00007y7k 10.2210/pdb7y7k/pdb WWPDB D_1300030390 ? ? EMDB EMD-33668 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'SARS-CoV-2 RBD in complex with 1F Fab' _pdbx_database_related.db_id EMD-33668 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7Y7K _pdbx_database_status.recvd_initial_deposition_date 2022-06-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhao, S.' 1 ? 'Liu, F.' 2 ? 'Yang, X.' 3 ? 'Zhong, G.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country CN _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Protein Cell' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1674-8018 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 14 _citation.language ? _citation.page_first 74 _citation.page_last 78 _citation.title 'A core epitope targeting antibody of SARS-CoV-2.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/procel/pwac042 _citation.pdbx_database_id_PubMed 36726762 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhao, S.' 1 0000-0003-0372-0751 primary 'Liu, F.' 2 ? primary 'Qiu, S.' 3 ? primary 'Lan, Q.' 4 ? primary 'Wu, Y.' 5 ? primary 'Xu, W.' 6 ? primary 'Ke, J.' 7 ? primary 'Yang, J.' 8 ? primary 'Liu, X.' 9 ? primary 'Wang, K.' 10 ? primary 'Guo, H.' 11 ? primary 'Xia, S.' 12 ? primary 'Zhang, F.' 13 ? primary 'Wang, J.' 14 ? primary 'Hu, X.' 15 ? primary 'Lu, L.' 16 ? primary 'Jiang, S.' 17 0000-0001-8283-7135 primary 'Zhao, S.' 18 ? primary 'Liu, L.' 19 ? primary 'Xie, Y.' 20 ? primary 'Yang, X.' 21 0000-0003-3443-9815 primary 'Wang, H.' 22 0000-0002-4995-0838 primary 'Zhong, G.' 23 0000-0003-0416-3774 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7Y7K _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 7Y7K _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Spike protein S1' 20207.561 1 ? ? ? ? 2 polymer man '1F VH' 14521.017 1 ? ? ? ? 3 polymer man '1F VL' 11719.901 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;CPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQT GKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSY GFQPTNGVGYQPYRVVVLS ; ;CPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQT GKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSY GFQPTNGVGYQPYRVVVLS ; A ? 2 'polypeptide(L)' no no ;EVQLVESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYRGSTYYNPSLKSRVTISVDTSKNQF SLKLSSVTAADTAVYYCARHVRSAYYYGSGSYRDEGNWFDPWGQGTLVTVSS ; ;EVQLVESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYRGSTYYNPSLKSRVTISVDTSKNQF SLKLSSVTAADTAVYYCARHVRSAYYYGSGSYRDEGNWFDPWGQGTLVTVSS ; B ? 3 'polypeptide(L)' no no ;QSVLTQPPSVSGAPGQRVTISCTGTRSNIGAGHDVHWYQQLPGTAPKLLIYGNNNRPSGVPDRFSGAKSGTSASLAITGL QAEDEADYYCQSYDRTLTSYVFGTGTKVTVL ; ;QSVLTQPPSVSGAPGQRVTISCTGTRSNIGAGHDVHWYQQLPGTAPKLLIYGNNNRPSGVPDRFSGAKSGTSASLAITGL QAEDEADYYCQSYDRTLTSYVFGTGTKVTVL ; C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 CYS n 1 2 PRO n 1 3 PHE n 1 4 GLY n 1 5 GLU n 1 6 VAL n 1 7 PHE n 1 8 ASN n 1 9 ALA n 1 10 THR n 1 11 ARG n 1 12 PHE n 1 13 ALA n 1 14 SER n 1 15 VAL n 1 16 TYR n 1 17 ALA n 1 18 TRP n 1 19 ASN n 1 20 ARG n 1 21 LYS n 1 22 ARG n 1 23 ILE n 1 24 SER n 1 25 ASN n 1 26 CYS n 1 27 VAL n 1 28 ALA n 1 29 ASP n 1 30 TYR n 1 31 SER n 1 32 VAL n 1 33 LEU n 1 34 TYR n 1 35 ASN n 1 36 SER n 1 37 ALA n 1 38 SER n 1 39 PHE n 1 40 SER n 1 41 THR n 1 42 PHE n 1 43 LYS n 1 44 CYS n 1 45 TYR n 1 46 GLY n 1 47 VAL n 1 48 SER n 1 49 PRO n 1 50 THR n 1 51 LYS n 1 52 LEU n 1 53 ASN n 1 54 ASP n 1 55 LEU n 1 56 CYS n 1 57 PHE n 1 58 THR n 1 59 ASN n 1 60 VAL n 1 61 TYR n 1 62 ALA n 1 63 ASP n 1 64 SER n 1 65 PHE n 1 66 VAL n 1 67 ILE n 1 68 ARG n 1 69 GLY n 1 70 ASP n 1 71 GLU n 1 72 VAL n 1 73 ARG n 1 74 GLN n 1 75 ILE n 1 76 ALA n 1 77 PRO n 1 78 GLY n 1 79 GLN n 1 80 THR n 1 81 GLY n 1 82 LYS n 1 83 ILE n 1 84 ALA n 1 85 ASP n 1 86 TYR n 1 87 ASN n 1 88 TYR n 1 89 LYS n 1 90 LEU n 1 91 PRO n 1 92 ASP n 1 93 ASP n 1 94 PHE n 1 95 THR n 1 96 GLY n 1 97 CYS n 1 98 VAL n 1 99 ILE n 1 100 ALA n 1 101 TRP n 1 102 ASN n 1 103 SER n 1 104 ASN n 1 105 ASN n 1 106 LEU n 1 107 ASP n 1 108 SER n 1 109 LYS n 1 110 VAL n 1 111 GLY n 1 112 GLY n 1 113 ASN n 1 114 TYR n 1 115 ASN n 1 116 TYR n 1 117 LEU n 1 118 TYR n 1 119 ARG n 1 120 LEU n 1 121 PHE n 1 122 ARG n 1 123 LYS n 1 124 SER n 1 125 ASN n 1 126 LEU n 1 127 LYS n 1 128 PRO n 1 129 PHE n 1 130 GLU n 1 131 ARG n 1 132 ASP n 1 133 ILE n 1 134 SER n 1 135 THR n 1 136 GLU n 1 137 ILE n 1 138 TYR n 1 139 GLN n 1 140 ALA n 1 141 GLY n 1 142 SER n 1 143 THR n 1 144 PRO n 1 145 CYS n 1 146 ASN n 1 147 GLY n 1 148 VAL n 1 149 GLU n 1 150 GLY n 1 151 PHE n 1 152 ASN n 1 153 CYS n 1 154 TYR n 1 155 PHE n 1 156 PRO n 1 157 LEU n 1 158 GLN n 1 159 SER n 1 160 TYR n 1 161 GLY n 1 162 PHE n 1 163 GLN n 1 164 PRO n 1 165 THR n 1 166 ASN n 1 167 GLY n 1 168 VAL n 1 169 GLY n 1 170 TYR n 1 171 GLN n 1 172 PRO n 1 173 TYR n 1 174 ARG n 1 175 VAL n 1 176 VAL n 1 177 VAL n 1 178 LEU n 1 179 SER n 2 1 GLU n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 VAL n 2 6 GLU n 2 7 SER n 2 8 GLY n 2 9 PRO n 2 10 GLY n 2 11 LEU n 2 12 VAL n 2 13 LYS n 2 14 PRO n 2 15 SER n 2 16 GLU n 2 17 THR n 2 18 LEU n 2 19 SER n 2 20 LEU n 2 21 THR n 2 22 CYS n 2 23 THR n 2 24 VAL n 2 25 SER n 2 26 GLY n 2 27 GLY n 2 28 SER n 2 29 ILE n 2 30 SER n 2 31 SER n 2 32 SER n 2 33 SER n 2 34 TYR n 2 35 TYR n 2 36 TRP n 2 37 GLY n 2 38 TRP n 2 39 ILE n 2 40 ARG n 2 41 GLN n 2 42 PRO n 2 43 PRO n 2 44 GLY n 2 45 LYS n 2 46 GLY n 2 47 LEU n 2 48 GLU n 2 49 TRP n 2 50 ILE n 2 51 GLY n 2 52 SER n 2 53 ILE n 2 54 TYR n 2 55 TYR n 2 56 ARG n 2 57 GLY n 2 58 SER n 2 59 THR n 2 60 TYR n 2 61 TYR n 2 62 ASN n 2 63 PRO n 2 64 SER n 2 65 LEU n 2 66 LYS n 2 67 SER n 2 68 ARG n 2 69 VAL n 2 70 THR n 2 71 ILE n 2 72 SER n 2 73 VAL n 2 74 ASP n 2 75 THR n 2 76 SER n 2 77 LYS n 2 78 ASN n 2 79 GLN n 2 80 PHE n 2 81 SER n 2 82 LEU n 2 83 LYS n 2 84 LEU n 2 85 SER n 2 86 SER n 2 87 VAL n 2 88 THR n 2 89 ALA n 2 90 ALA n 2 91 ASP n 2 92 THR n 2 93 ALA n 2 94 VAL n 2 95 TYR n 2 96 TYR n 2 97 CYS n 2 98 ALA n 2 99 ARG n 2 100 HIS n 2 101 VAL n 2 102 ARG n 2 103 SER n 2 104 ALA n 2 105 TYR n 2 106 TYR n 2 107 TYR n 2 108 GLY n 2 109 SER n 2 110 GLY n 2 111 SER n 2 112 TYR n 2 113 ARG n 2 114 ASP n 2 115 GLU n 2 116 GLY n 2 117 ASN n 2 118 TRP n 2 119 PHE n 2 120 ASP n 2 121 PRO n 2 122 TRP n 2 123 GLY n 2 124 GLN n 2 125 GLY n 2 126 THR n 2 127 LEU n 2 128 VAL n 2 129 THR n 2 130 VAL n 2 131 SER n 2 132 SER n 3 1 GLN n 3 2 SER n 3 3 VAL n 3 4 LEU n 3 5 THR n 3 6 GLN n 3 7 PRO n 3 8 PRO n 3 9 SER n 3 10 VAL n 3 11 SER n 3 12 GLY n 3 13 ALA n 3 14 PRO n 3 15 GLY n 3 16 GLN n 3 17 ARG n 3 18 VAL n 3 19 THR n 3 20 ILE n 3 21 SER n 3 22 CYS n 3 23 THR n 3 24 GLY n 3 25 THR n 3 26 ARG n 3 27 SER n 3 28 ASN n 3 29 ILE n 3 30 GLY n 3 31 ALA n 3 32 GLY n 3 33 HIS n 3 34 ASP n 3 35 VAL n 3 36 HIS n 3 37 TRP n 3 38 TYR n 3 39 GLN n 3 40 GLN n 3 41 LEU n 3 42 PRO n 3 43 GLY n 3 44 THR n 3 45 ALA n 3 46 PRO n 3 47 LYS n 3 48 LEU n 3 49 LEU n 3 50 ILE n 3 51 TYR n 3 52 GLY n 3 53 ASN n 3 54 ASN n 3 55 ASN n 3 56 ARG n 3 57 PRO n 3 58 SER n 3 59 GLY n 3 60 VAL n 3 61 PRO n 3 62 ASP n 3 63 ARG n 3 64 PHE n 3 65 SER n 3 66 GLY n 3 67 ALA n 3 68 LYS n 3 69 SER n 3 70 GLY n 3 71 THR n 3 72 SER n 3 73 ALA n 3 74 SER n 3 75 LEU n 3 76 ALA n 3 77 ILE n 3 78 THR n 3 79 GLY n 3 80 LEU n 3 81 GLN n 3 82 ALA n 3 83 GLU n 3 84 ASP n 3 85 GLU n 3 86 ALA n 3 87 ASP n 3 88 TYR n 3 89 TYR n 3 90 CYS n 3 91 GLN n 3 92 SER n 3 93 TYR n 3 94 ASP n 3 95 ARG n 3 96 THR n 3 97 LEU n 3 98 THR n 3 99 SER n 3 100 TYR n 3 101 VAL n 3 102 PHE n 3 103 GLY n 3 104 THR n 3 105 GLY n 3 106 THR n 3 107 LYS n 3 108 VAL n 3 109 THR n 3 110 VAL n 3 111 LEU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 179 2019-nCoV,SARS-CoV-2 ? 'S, 2' ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 132 human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 111 human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SPIKE_SARS2 P0DTC2 ? 1 ;CPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQT GKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSY GFQPTNGVGYQPYRVVVLS ; 336 2 PDB 7Y7K 7Y7K ? 2 ? 1 3 PDB 7Y7K 7Y7K ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7Y7K A 1 ? 179 ? P0DTC2 336 ? 514 ? 336 514 2 2 7Y7K B 1 ? 132 ? 7Y7K 1 ? 132 ? 1 132 3 3 7Y7K C 1 ? 111 ? 7Y7K 1 ? 111 ? 1 111 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7Y7K _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7Y7K _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 4.40 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.010 ? 3012 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 1.750 ? 4123 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 13.132 ? 1772 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.074 ? 472 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.012 ? 541 ? f_plane_restr ? ? # _struct.entry_id 7Y7K _struct.title 'SARS-CoV-2 RBD in complex with 1F Fab' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7Y7K _struct_keywords.text 'COVID-19, spike glycoprotein, virus, VIRAL PROTEIN, VIRAL PROTEIN-IMMUNE SYSTEM complex' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 2 ? ASN A 8 ? PRO A 337 ASN A 343 1 ? 7 HELX_P HELX_P2 AA2 ASP A 29 ? ASN A 35 ? ASP A 364 ASN A 370 1 ? 7 HELX_P HELX_P3 AA3 ASP A 70 ? ILE A 75 ? ASP A 405 ILE A 410 5 ? 6 HELX_P HELX_P4 AA4 GLY A 81 ? ASN A 87 ? GLY A 416 ASN A 422 1 ? 7 HELX_P HELX_P5 AA5 SER A 103 ? SER A 108 ? SER A 438 SER A 443 1 ? 6 HELX_P HELX_P6 AA6 GLY A 167 ? TYR A 170 ? GLY A 502 TYR A 505 5 ? 4 HELX_P HELX_P7 AA7 LEU B 65 ? SER B 67 ? LEU B 65 SER B 67 5 ? 3 HELX_P HELX_P8 AA8 THR B 88 ? THR B 92 ? THR B 88 THR B 92 5 ? 5 HELX_P HELX_P9 AA9 GLN C 81 ? GLU C 85 ? GLN C 81 GLU C 85 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 1 SG ? ? ? 1_555 A CYS 26 SG ? ? A CYS 336 A CYS 361 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf2 disulf ? ? A CYS 44 SG ? ? ? 1_555 A CYS 97 SG ? ? A CYS 379 A CYS 432 1_555 ? ? ? ? ? ? ? 2.026 ? ? disulf3 disulf ? ? A CYS 145 SG ? ? ? 1_555 A CYS 153 SG ? ? A CYS 480 A CYS 488 1_555 ? ? ? ? ? ? ? 2.013 ? ? disulf4 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 97 SG ? ? B CYS 22 B CYS 97 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf5 disulf ? ? C CYS 22 SG ? ? ? 1_555 C CYS 90 SG ? ? C CYS 22 C CYS 90 1_555 ? ? ? ? ? ? ? 2.033 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 4 ? AA3 ? 6 ? AA4 ? 3 ? AA5 ? 4 ? AA6 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASN A 19 ? ILE A 23 ? ASN A 354 ILE A 358 AA1 2 VAL A 60 ? ARG A 68 ? VAL A 395 ARG A 403 AA1 3 PRO A 172 ? SER A 179 ? PRO A 507 SER A 514 AA1 4 GLY A 96 ? ASN A 102 ? GLY A 431 ASN A 437 AA1 5 THR A 41 ? TYR A 45 ? THR A 376 TYR A 380 AA2 1 GLN B 3 ? SER B 7 ? GLN B 3 SER B 7 AA2 2 LEU B 18 ? SER B 25 ? LEU B 18 SER B 25 AA2 3 GLN B 79 ? LEU B 84 ? GLN B 79 LEU B 84 AA2 4 VAL B 69 ? ASP B 74 ? VAL B 69 ASP B 74 AA3 1 LEU B 11 ? VAL B 12 ? LEU B 11 VAL B 12 AA3 2 THR B 126 ? VAL B 130 ? THR B 126 VAL B 130 AA3 3 ALA B 93 ? HIS B 100 ? ALA B 93 HIS B 100 AA3 4 TYR B 35 ? GLN B 41 ? TYR B 35 GLN B 41 AA3 5 GLU B 48 ? SER B 52 ? GLU B 48 SER B 52 AA3 6 TYR B 60 ? TYR B 61 ? TYR B 60 TYR B 61 AA4 1 ARG C 17 ? THR C 23 ? ARG C 17 THR C 23 AA4 2 SER C 72 ? THR C 78 ? SER C 72 THR C 78 AA4 3 PHE C 64 ? SER C 69 ? PHE C 64 SER C 69 AA5 1 LYS C 47 ? ILE C 50 ? LYS C 47 ILE C 50 AA5 2 HIS C 33 ? GLN C 40 ? HIS C 33 GLN C 40 AA5 3 ASP C 87 ? ASP C 94 ? ASP C 87 ASP C 94 AA5 4 SER C 99 ? PHE C 102 ? SER C 99 PHE C 102 AA6 1 LYS C 47 ? ILE C 50 ? LYS C 47 ILE C 50 AA6 2 HIS C 33 ? GLN C 40 ? HIS C 33 GLN C 40 AA6 3 ASP C 87 ? ASP C 94 ? ASP C 87 ASP C 94 AA6 4 THR C 106 ? LYS C 107 ? THR C 106 LYS C 107 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASN A 19 ? N ASN A 354 O SER A 64 ? O SER A 399 AA1 2 3 N PHE A 65 ? N PHE A 400 O VAL A 175 ? O VAL A 510 AA1 3 4 O VAL A 176 ? O VAL A 511 N ILE A 99 ? N ILE A 434 AA1 4 5 O VAL A 98 ? O VAL A 433 N LYS A 43 ? N LYS A 378 AA2 1 2 N GLN B 3 ? N GLN B 3 O SER B 25 ? O SER B 25 AA2 2 3 N LEU B 20 ? N LEU B 20 O LEU B 82 ? O LEU B 82 AA2 3 4 O LYS B 83 ? O LYS B 83 N THR B 70 ? N THR B 70 AA3 1 2 N VAL B 12 ? N VAL B 12 O THR B 129 ? O THR B 129 AA3 2 3 O THR B 126 ? O THR B 126 N TYR B 95 ? N TYR B 95 AA3 3 4 O TYR B 96 ? O TYR B 96 N ILE B 39 ? N ILE B 39 AA3 4 5 N ARG B 40 ? N ARG B 40 O GLU B 48 ? O GLU B 48 AA3 5 6 N SER B 52 ? N SER B 52 O TYR B 60 ? O TYR B 60 AA4 1 2 N ILE C 20 ? N ILE C 20 O LEU C 75 ? O LEU C 75 AA4 2 3 O ALA C 76 ? O ALA C 76 N SER C 65 ? N SER C 65 AA5 1 2 O LEU C 49 ? O LEU C 49 N TRP C 37 ? N TRP C 37 AA5 2 3 N TYR C 38 ? N TYR C 38 O TYR C 89 ? O TYR C 89 AA5 3 4 N ASP C 94 ? N ASP C 94 O SER C 99 ? O SER C 99 AA6 1 2 O LEU C 49 ? O LEU C 49 N TRP C 37 ? N TRP C 37 AA6 2 3 N TYR C 38 ? N TYR C 38 O TYR C 89 ? O TYR C 89 AA6 3 4 N TYR C 88 ? N TYR C 88 O THR C 106 ? O THR C 106 # _database_PDB_matrix.entry_id 7Y7K _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 7Y7K _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 CYS 1 336 336 CYS CYS A . n A 1 2 PRO 2 337 337 PRO PRO A . n A 1 3 PHE 3 338 338 PHE PHE A . n A 1 4 GLY 4 339 339 GLY GLY A . n A 1 5 GLU 5 340 340 GLU GLU A . n A 1 6 VAL 6 341 341 VAL VAL A . n A 1 7 PHE 7 342 342 PHE PHE A . n A 1 8 ASN 8 343 343 ASN ASN A . n A 1 9 ALA 9 344 344 ALA ALA A . n A 1 10 THR 10 345 345 THR THR A . n A 1 11 ARG 11 346 346 ARG ARG A . n A 1 12 PHE 12 347 347 PHE PHE A . n A 1 13 ALA 13 348 348 ALA ALA A . n A 1 14 SER 14 349 349 SER SER A . n A 1 15 VAL 15 350 350 VAL VAL A . n A 1 16 TYR 16 351 351 TYR TYR A . n A 1 17 ALA 17 352 352 ALA ALA A . n A 1 18 TRP 18 353 353 TRP TRP A . n A 1 19 ASN 19 354 354 ASN ASN A . n A 1 20 ARG 20 355 355 ARG ARG A . n A 1 21 LYS 21 356 356 LYS LYS A . n A 1 22 ARG 22 357 357 ARG ARG A . n A 1 23 ILE 23 358 358 ILE ILE A . n A 1 24 SER 24 359 359 SER SER A . n A 1 25 ASN 25 360 360 ASN ASN A . n A 1 26 CYS 26 361 361 CYS CYS A . n A 1 27 VAL 27 362 362 VAL VAL A . n A 1 28 ALA 28 363 363 ALA ALA A . n A 1 29 ASP 29 364 364 ASP ASP A . n A 1 30 TYR 30 365 365 TYR TYR A . n A 1 31 SER 31 366 366 SER SER A . n A 1 32 VAL 32 367 367 VAL VAL A . n A 1 33 LEU 33 368 368 LEU LEU A . n A 1 34 TYR 34 369 369 TYR TYR A . n A 1 35 ASN 35 370 370 ASN ASN A . n A 1 36 SER 36 371 371 SER SER A . n A 1 37 ALA 37 372 372 ALA ALA A . n A 1 38 SER 38 373 373 SER SER A . n A 1 39 PHE 39 374 374 PHE PHE A . n A 1 40 SER 40 375 375 SER SER A . n A 1 41 THR 41 376 376 THR THR A . n A 1 42 PHE 42 377 377 PHE PHE A . n A 1 43 LYS 43 378 378 LYS LYS A . n A 1 44 CYS 44 379 379 CYS CYS A . n A 1 45 TYR 45 380 380 TYR TYR A . n A 1 46 GLY 46 381 381 GLY GLY A . n A 1 47 VAL 47 382 382 VAL VAL A . n A 1 48 SER 48 383 383 SER SER A . n A 1 49 PRO 49 384 384 PRO PRO A . n A 1 50 THR 50 385 385 THR THR A . n A 1 51 LYS 51 386 386 LYS LYS A . n A 1 52 LEU 52 387 387 LEU LEU A . n A 1 53 ASN 53 388 388 ASN ASN A . n A 1 54 ASP 54 389 389 ASP ASP A . n A 1 55 LEU 55 390 390 LEU LEU A . n A 1 56 CYS 56 391 391 CYS CYS A . n A 1 57 PHE 57 392 392 PHE PHE A . n A 1 58 THR 58 393 393 THR THR A . n A 1 59 ASN 59 394 394 ASN ASN A . n A 1 60 VAL 60 395 395 VAL VAL A . n A 1 61 TYR 61 396 396 TYR TYR A . n A 1 62 ALA 62 397 397 ALA ALA A . n A 1 63 ASP 63 398 398 ASP ASP A . n A 1 64 SER 64 399 399 SER SER A . n A 1 65 PHE 65 400 400 PHE PHE A . n A 1 66 VAL 66 401 401 VAL VAL A . n A 1 67 ILE 67 402 402 ILE ILE A . n A 1 68 ARG 68 403 403 ARG ARG A . n A 1 69 GLY 69 404 404 GLY GLY A . n A 1 70 ASP 70 405 405 ASP ASP A . n A 1 71 GLU 71 406 406 GLU GLU A . n A 1 72 VAL 72 407 407 VAL VAL A . n A 1 73 ARG 73 408 408 ARG ARG A . n A 1 74 GLN 74 409 409 GLN GLN A . n A 1 75 ILE 75 410 410 ILE ILE A . n A 1 76 ALA 76 411 411 ALA ALA A . n A 1 77 PRO 77 412 412 PRO PRO A . n A 1 78 GLY 78 413 413 GLY GLY A . n A 1 79 GLN 79 414 414 GLN GLN A . n A 1 80 THR 80 415 415 THR THR A . n A 1 81 GLY 81 416 416 GLY GLY A . n A 1 82 LYS 82 417 417 LYS LYS A . n A 1 83 ILE 83 418 418 ILE ILE A . n A 1 84 ALA 84 419 419 ALA ALA A . n A 1 85 ASP 85 420 420 ASP ASP A . n A 1 86 TYR 86 421 421 TYR TYR A . n A 1 87 ASN 87 422 422 ASN ASN A . n A 1 88 TYR 88 423 423 TYR TYR A . n A 1 89 LYS 89 424 424 LYS LYS A . n A 1 90 LEU 90 425 425 LEU LEU A . n A 1 91 PRO 91 426 426 PRO PRO A . n A 1 92 ASP 92 427 427 ASP ASP A . n A 1 93 ASP 93 428 428 ASP ASP A . n A 1 94 PHE 94 429 429 PHE PHE A . n A 1 95 THR 95 430 430 THR THR A . n A 1 96 GLY 96 431 431 GLY GLY A . n A 1 97 CYS 97 432 432 CYS CYS A . n A 1 98 VAL 98 433 433 VAL VAL A . n A 1 99 ILE 99 434 434 ILE ILE A . n A 1 100 ALA 100 435 435 ALA ALA A . n A 1 101 TRP 101 436 436 TRP TRP A . n A 1 102 ASN 102 437 437 ASN ASN A . n A 1 103 SER 103 438 438 SER SER A . n A 1 104 ASN 104 439 439 ASN ASN A . n A 1 105 ASN 105 440 440 ASN ASN A . n A 1 106 LEU 106 441 441 LEU LEU A . n A 1 107 ASP 107 442 442 ASP ASP A . n A 1 108 SER 108 443 443 SER SER A . n A 1 109 LYS 109 444 444 LYS LYS A . n A 1 110 VAL 110 445 445 VAL VAL A . n A 1 111 GLY 111 446 446 GLY GLY A . n A 1 112 GLY 112 447 447 GLY GLY A . n A 1 113 ASN 113 448 448 ASN ASN A . n A 1 114 TYR 114 449 449 TYR TYR A . n A 1 115 ASN 115 450 450 ASN ASN A . n A 1 116 TYR 116 451 451 TYR TYR A . n A 1 117 LEU 117 452 452 LEU LEU A . n A 1 118 TYR 118 453 453 TYR TYR A . n A 1 119 ARG 119 454 454 ARG ARG A . n A 1 120 LEU 120 455 455 LEU LEU A . n A 1 121 PHE 121 456 456 PHE PHE A . n A 1 122 ARG 122 457 457 ARG ARG A . n A 1 123 LYS 123 458 458 LYS LYS A . n A 1 124 SER 124 459 459 SER SER A . n A 1 125 ASN 125 460 460 ASN ASN A . n A 1 126 LEU 126 461 461 LEU LEU A . n A 1 127 LYS 127 462 462 LYS LYS A . n A 1 128 PRO 128 463 463 PRO PRO A . n A 1 129 PHE 129 464 464 PHE PHE A . n A 1 130 GLU 130 465 465 GLU GLU A . n A 1 131 ARG 131 466 466 ARG ARG A . n A 1 132 ASP 132 467 467 ASP ASP A . n A 1 133 ILE 133 468 468 ILE ILE A . n A 1 134 SER 134 469 469 SER SER A . n A 1 135 THR 135 470 470 THR THR A . n A 1 136 GLU 136 471 471 GLU GLU A . n A 1 137 ILE 137 472 472 ILE ILE A . n A 1 138 TYR 138 473 473 TYR TYR A . n A 1 139 GLN 139 474 474 GLN GLN A . n A 1 140 ALA 140 475 475 ALA ALA A . n A 1 141 GLY 141 476 476 GLY GLY A . n A 1 142 SER 142 477 477 SER SER A . n A 1 143 THR 143 478 478 THR THR A . n A 1 144 PRO 144 479 479 PRO PRO A . n A 1 145 CYS 145 480 480 CYS CYS A . n A 1 146 ASN 146 481 481 ASN ASN A . n A 1 147 GLY 147 482 482 GLY GLY A . n A 1 148 VAL 148 483 483 VAL VAL A . n A 1 149 GLU 149 484 484 GLU GLU A . n A 1 150 GLY 150 485 485 GLY GLY A . n A 1 151 PHE 151 486 486 PHE PHE A . n A 1 152 ASN 152 487 487 ASN ASN A . n A 1 153 CYS 153 488 488 CYS CYS A . n A 1 154 TYR 154 489 489 TYR TYR A . n A 1 155 PHE 155 490 490 PHE PHE A . n A 1 156 PRO 156 491 491 PRO PRO A . n A 1 157 LEU 157 492 492 LEU LEU A . n A 1 158 GLN 158 493 493 GLN GLN A . n A 1 159 SER 159 494 494 SER SER A . n A 1 160 TYR 160 495 495 TYR TYR A . n A 1 161 GLY 161 496 496 GLY GLY A . n A 1 162 PHE 162 497 497 PHE PHE A . n A 1 163 GLN 163 498 498 GLN GLN A . n A 1 164 PRO 164 499 499 PRO PRO A . n A 1 165 THR 165 500 500 THR THR A . n A 1 166 ASN 166 501 501 ASN ASN A . n A 1 167 GLY 167 502 502 GLY GLY A . n A 1 168 VAL 168 503 503 VAL VAL A . n A 1 169 GLY 169 504 504 GLY GLY A . n A 1 170 TYR 170 505 505 TYR TYR A . n A 1 171 GLN 171 506 506 GLN GLN A . n A 1 172 PRO 172 507 507 PRO PRO A . n A 1 173 TYR 173 508 508 TYR TYR A . n A 1 174 ARG 174 509 509 ARG ARG A . n A 1 175 VAL 175 510 510 VAL VAL A . n A 1 176 VAL 176 511 511 VAL VAL A . n A 1 177 VAL 177 512 512 VAL VAL A . n A 1 178 LEU 178 513 513 LEU LEU A . n A 1 179 SER 179 514 514 SER SER A . n B 2 1 GLU 1 1 1 GLU GLU B . n B 2 2 VAL 2 2 2 VAL VAL B . n B 2 3 GLN 3 3 3 GLN GLN B . n B 2 4 LEU 4 4 4 LEU LEU B . n B 2 5 VAL 5 5 5 VAL VAL B . n B 2 6 GLU 6 6 6 GLU GLU B . n B 2 7 SER 7 7 7 SER SER B . n B 2 8 GLY 8 8 8 GLY GLY B . n B 2 9 PRO 9 9 9 PRO PRO B . n B 2 10 GLY 10 10 10 GLY GLY B . n B 2 11 LEU 11 11 11 LEU LEU B . n B 2 12 VAL 12 12 12 VAL VAL B . n B 2 13 LYS 13 13 13 LYS LYS B . n B 2 14 PRO 14 14 14 PRO PRO B . n B 2 15 SER 15 15 15 SER SER B . n B 2 16 GLU 16 16 16 GLU GLU B . n B 2 17 THR 17 17 17 THR THR B . n B 2 18 LEU 18 18 18 LEU LEU B . n B 2 19 SER 19 19 19 SER SER B . n B 2 20 LEU 20 20 20 LEU LEU B . n B 2 21 THR 21 21 21 THR THR B . n B 2 22 CYS 22 22 22 CYS CYS B . n B 2 23 THR 23 23 23 THR THR B . n B 2 24 VAL 24 24 24 VAL VAL B . n B 2 25 SER 25 25 25 SER SER B . n B 2 26 GLY 26 26 26 GLY GLY B . n B 2 27 GLY 27 27 27 GLY GLY B . n B 2 28 SER 28 28 28 SER SER B . n B 2 29 ILE 29 29 29 ILE ILE B . n B 2 30 SER 30 30 30 SER SER B . n B 2 31 SER 31 31 31 SER SER B . n B 2 32 SER 32 32 32 SER SER B . n B 2 33 SER 33 33 33 SER SER B . n B 2 34 TYR 34 34 34 TYR TYR B . n B 2 35 TYR 35 35 35 TYR TYR B . n B 2 36 TRP 36 36 36 TRP TRP B . n B 2 37 GLY 37 37 37 GLY GLY B . n B 2 38 TRP 38 38 38 TRP TRP B . n B 2 39 ILE 39 39 39 ILE ILE B . n B 2 40 ARG 40 40 40 ARG ARG B . n B 2 41 GLN 41 41 41 GLN GLN B . n B 2 42 PRO 42 42 42 PRO PRO B . n B 2 43 PRO 43 43 43 PRO PRO B . n B 2 44 GLY 44 44 44 GLY GLY B . n B 2 45 LYS 45 45 45 LYS LYS B . n B 2 46 GLY 46 46 46 GLY GLY B . n B 2 47 LEU 47 47 47 LEU LEU B . n B 2 48 GLU 48 48 48 GLU GLU B . n B 2 49 TRP 49 49 49 TRP TRP B . n B 2 50 ILE 50 50 50 ILE ILE B . n B 2 51 GLY 51 51 51 GLY GLY B . n B 2 52 SER 52 52 52 SER SER B . n B 2 53 ILE 53 53 53 ILE ILE B . n B 2 54 TYR 54 54 54 TYR TYR B . n B 2 55 TYR 55 55 55 TYR TYR B . n B 2 56 ARG 56 56 56 ARG ARG B . n B 2 57 GLY 57 57 57 GLY GLY B . n B 2 58 SER 58 58 58 SER SER B . n B 2 59 THR 59 59 59 THR THR B . n B 2 60 TYR 60 60 60 TYR TYR B . n B 2 61 TYR 61 61 61 TYR TYR B . n B 2 62 ASN 62 62 62 ASN ASN B . n B 2 63 PRO 63 63 63 PRO PRO B . n B 2 64 SER 64 64 64 SER SER B . n B 2 65 LEU 65 65 65 LEU LEU B . n B 2 66 LYS 66 66 66 LYS LYS B . n B 2 67 SER 67 67 67 SER SER B . n B 2 68 ARG 68 68 68 ARG ARG B . n B 2 69 VAL 69 69 69 VAL VAL B . n B 2 70 THR 70 70 70 THR THR B . n B 2 71 ILE 71 71 71 ILE ILE B . n B 2 72 SER 72 72 72 SER SER B . n B 2 73 VAL 73 73 73 VAL VAL B . n B 2 74 ASP 74 74 74 ASP ASP B . n B 2 75 THR 75 75 75 THR THR B . n B 2 76 SER 76 76 76 SER SER B . n B 2 77 LYS 77 77 77 LYS LYS B . n B 2 78 ASN 78 78 78 ASN ASN B . n B 2 79 GLN 79 79 79 GLN GLN B . n B 2 80 PHE 80 80 80 PHE PHE B . n B 2 81 SER 81 81 81 SER SER B . n B 2 82 LEU 82 82 82 LEU LEU B . n B 2 83 LYS 83 83 83 LYS LYS B . n B 2 84 LEU 84 84 84 LEU LEU B . n B 2 85 SER 85 85 85 SER SER B . n B 2 86 SER 86 86 86 SER SER B . n B 2 87 VAL 87 87 87 VAL VAL B . n B 2 88 THR 88 88 88 THR THR B . n B 2 89 ALA 89 89 89 ALA ALA B . n B 2 90 ALA 90 90 90 ALA ALA B . n B 2 91 ASP 91 91 91 ASP ASP B . n B 2 92 THR 92 92 92 THR THR B . n B 2 93 ALA 93 93 93 ALA ALA B . n B 2 94 VAL 94 94 94 VAL VAL B . n B 2 95 TYR 95 95 95 TYR TYR B . n B 2 96 TYR 96 96 96 TYR TYR B . n B 2 97 CYS 97 97 97 CYS CYS B . n B 2 98 ALA 98 98 98 ALA ALA B . n B 2 99 ARG 99 99 99 ARG ARG B . n B 2 100 HIS 100 100 100 HIS HIS B . n B 2 101 VAL 101 101 101 VAL VAL B . n B 2 102 ARG 102 102 102 ARG ARG B . n B 2 103 SER 103 103 103 SER SER B . n B 2 104 ALA 104 104 104 ALA ALA B . n B 2 105 TYR 105 105 105 TYR TYR B . n B 2 106 TYR 106 106 106 TYR TYR B . n B 2 107 TYR 107 107 107 TYR TYR B . n B 2 108 GLY 108 108 108 GLY GLY B . n B 2 109 SER 109 109 109 SER SER B . n B 2 110 GLY 110 110 110 GLY GLY B . n B 2 111 SER 111 111 111 SER SER B . n B 2 112 TYR 112 112 112 TYR TYR B . n B 2 113 ARG 113 113 113 ARG ARG B . n B 2 114 ASP 114 114 114 ASP ASP B . n B 2 115 GLU 115 115 115 GLU GLU B . n B 2 116 GLY 116 116 116 GLY GLY B . n B 2 117 ASN 117 117 117 ASN ASN B . n B 2 118 TRP 118 118 118 TRP TRP B . n B 2 119 PHE 119 119 119 PHE PHE B . n B 2 120 ASP 120 120 120 ASP ASP B . n B 2 121 PRO 121 121 121 PRO PRO B . n B 2 122 TRP 122 122 122 TRP TRP B . n B 2 123 GLY 123 123 123 GLY GLY B . n B 2 124 GLN 124 124 124 GLN GLN B . n B 2 125 GLY 125 125 125 GLY GLY B . n B 2 126 THR 126 126 126 THR THR B . n B 2 127 LEU 127 127 127 LEU LEU B . n B 2 128 VAL 128 128 128 VAL VAL B . n B 2 129 THR 129 129 129 THR THR B . n B 2 130 VAL 130 130 130 VAL VAL B . n B 2 131 SER 131 131 131 SER SER B . n B 2 132 SER 132 132 132 SER SER B . n C 3 1 GLN 1 1 1 GLN GLN C . n C 3 2 SER 2 2 2 SER SER C . n C 3 3 VAL 3 3 3 VAL VAL C . n C 3 4 LEU 4 4 4 LEU LEU C . n C 3 5 THR 5 5 5 THR THR C . n C 3 6 GLN 6 6 6 GLN GLN C . n C 3 7 PRO 7 7 7 PRO PRO C . n C 3 8 PRO 8 8 8 PRO PRO C . n C 3 9 SER 9 9 9 SER SER C . n C 3 10 VAL 10 10 10 VAL VAL C . n C 3 11 SER 11 11 11 SER SER C . n C 3 12 GLY 12 12 12 GLY GLY C . n C 3 13 ALA 13 13 13 ALA ALA C . n C 3 14 PRO 14 14 14 PRO PRO C . n C 3 15 GLY 15 15 15 GLY GLY C . n C 3 16 GLN 16 16 16 GLN GLN C . n C 3 17 ARG 17 17 17 ARG ARG C . n C 3 18 VAL 18 18 18 VAL VAL C . n C 3 19 THR 19 19 19 THR THR C . n C 3 20 ILE 20 20 20 ILE ILE C . n C 3 21 SER 21 21 21 SER SER C . n C 3 22 CYS 22 22 22 CYS CYS C . n C 3 23 THR 23 23 23 THR THR C . n C 3 24 GLY 24 24 24 GLY GLY C . n C 3 25 THR 25 25 25 THR THR C . n C 3 26 ARG 26 26 26 ARG ARG C . n C 3 27 SER 27 27 27 SER SER C . n C 3 28 ASN 28 28 28 ASN ASN C . n C 3 29 ILE 29 29 29 ILE ILE C . n C 3 30 GLY 30 30 30 GLY GLY C . n C 3 31 ALA 31 31 31 ALA ALA C . n C 3 32 GLY 32 32 32 GLY GLY C . n C 3 33 HIS 33 33 33 HIS HIS C . n C 3 34 ASP 34 34 34 ASP ASP C . n C 3 35 VAL 35 35 35 VAL VAL C . n C 3 36 HIS 36 36 36 HIS HIS C . n C 3 37 TRP 37 37 37 TRP TRP C . n C 3 38 TYR 38 38 38 TYR TYR C . n C 3 39 GLN 39 39 39 GLN GLN C . n C 3 40 GLN 40 40 40 GLN GLN C . n C 3 41 LEU 41 41 41 LEU LEU C . n C 3 42 PRO 42 42 42 PRO PRO C . n C 3 43 GLY 43 43 43 GLY GLY C . n C 3 44 THR 44 44 44 THR THR C . n C 3 45 ALA 45 45 45 ALA ALA C . n C 3 46 PRO 46 46 46 PRO PRO C . n C 3 47 LYS 47 47 47 LYS LYS C . n C 3 48 LEU 48 48 48 LEU LEU C . n C 3 49 LEU 49 49 49 LEU LEU C . n C 3 50 ILE 50 50 50 ILE ILE C . n C 3 51 TYR 51 51 51 TYR TYR C . n C 3 52 GLY 52 52 52 GLY GLY C . n C 3 53 ASN 53 53 53 ASN ASN C . n C 3 54 ASN 54 54 54 ASN ASN C . n C 3 55 ASN 55 55 55 ASN ASN C . n C 3 56 ARG 56 56 56 ARG ARG C . n C 3 57 PRO 57 57 57 PRO PRO C . n C 3 58 SER 58 58 58 SER SER C . n C 3 59 GLY 59 59 59 GLY GLY C . n C 3 60 VAL 60 60 60 VAL VAL C . n C 3 61 PRO 61 61 61 PRO PRO C . n C 3 62 ASP 62 62 62 ASP ASP C . n C 3 63 ARG 63 63 63 ARG ARG C . n C 3 64 PHE 64 64 64 PHE PHE C . n C 3 65 SER 65 65 65 SER SER C . n C 3 66 GLY 66 66 66 GLY GLY C . n C 3 67 ALA 67 67 67 ALA ALA C . n C 3 68 LYS 68 68 68 LYS LYS C . n C 3 69 SER 69 69 69 SER SER C . n C 3 70 GLY 70 70 70 GLY GLY C . n C 3 71 THR 71 71 71 THR THR C . n C 3 72 SER 72 72 72 SER SER C . n C 3 73 ALA 73 73 73 ALA ALA C . n C 3 74 SER 74 74 74 SER SER C . n C 3 75 LEU 75 75 75 LEU LEU C . n C 3 76 ALA 76 76 76 ALA ALA C . n C 3 77 ILE 77 77 77 ILE ILE C . n C 3 78 THR 78 78 78 THR THR C . n C 3 79 GLY 79 79 79 GLY GLY C . n C 3 80 LEU 80 80 80 LEU LEU C . n C 3 81 GLN 81 81 81 GLN GLN C . n C 3 82 ALA 82 82 82 ALA ALA C . n C 3 83 GLU 83 83 83 GLU GLU C . n C 3 84 ASP 84 84 84 ASP ASP C . n C 3 85 GLU 85 85 85 GLU GLU C . n C 3 86 ALA 86 86 86 ALA ALA C . n C 3 87 ASP 87 87 87 ASP ASP C . n C 3 88 TYR 88 88 88 TYR TYR C . n C 3 89 TYR 89 89 89 TYR TYR C . n C 3 90 CYS 90 90 90 CYS CYS C . n C 3 91 GLN 91 91 91 GLN GLN C . n C 3 92 SER 92 92 92 SER SER C . n C 3 93 TYR 93 93 93 TYR TYR C . n C 3 94 ASP 94 94 94 ASP ASP C . n C 3 95 ARG 95 95 95 ARG ARG C . n C 3 96 THR 96 96 96 THR THR C . n C 3 97 LEU 97 97 97 LEU LEU C . n C 3 98 THR 98 98 98 THR THR C . n C 3 99 SER 99 99 99 SER SER C . n C 3 100 TYR 100 100 100 TYR TYR C . n C 3 101 VAL 101 101 101 VAL VAL C . n C 3 102 PHE 102 102 102 PHE PHE C . n C 3 103 GLY 103 103 103 GLY GLY C . n C 3 104 THR 104 104 104 THR THR C . n C 3 105 GLY 105 105 105 GLY GLY C . n C 3 106 THR 106 106 106 THR THR C . n C 3 107 LYS 107 107 107 LYS LYS C . n C 3 108 VAL 108 108 108 VAL VAL C . n C 3 109 THR 109 109 109 THR THR C . n C 3 110 VAL 110 110 110 VAL VAL C . n C 3 111 LEU 111 111 111 LEU LEU C . n # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 yangxn@shanghaitech.edu.cn Xiuna Yang ? 'principal investigator/group leader' 0000-0003-3443-9815 3 zhongsh@shanghaitech.edu.cn Guisheng Zhong ? 'principal investigator/group leader' 0000-0003-0416-3774 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2023-02-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version 1.16_3549: _software.pdbx_ordinal 1 # _em_3d_fitting.entry_id 7Y7K _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol ? _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 7Y7K _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 61103 _em_3d_reconstruction.resolution 4.400 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7.40 _em_buffer.specimen_id 1 _em_buffer.name ? # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.details _em_entity_assembly.name _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.entity_id_list _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details 1 0 ? 'SARS-COV-2 RBD COMPLEX WITH 1F FAB' RECOMBINANT COMPLEX '1, 2, 3' ? ? 2 1 ? 'SARS-COV-2 RBD' RECOMBINANT COMPLEX 1 ? ? 3 1 ? '1F FAB' RECOMBINANT COMPLEX 2,3 ? ? # _em_imaging.id 1 _em_imaging.entry_id 7Y7K _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'SPOT SCAN' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max 2400 _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.entry_id 7Y7K _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7Y7K _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 352 ? ? -119.36 54.27 2 1 ASN A 360 ? ? 61.38 65.24 3 1 ASN A 422 ? ? -126.25 -55.60 4 1 PRO A 463 ? ? 21.88 104.49 5 1 PHE A 464 ? ? 49.71 93.59 6 1 ASP A 467 ? ? -56.92 63.75 7 1 ILE A 468 ? ? -87.96 -77.62 8 1 GLU A 471 ? ? -95.32 -155.34 9 1 SER A 477 ? ? 14.20 -69.43 10 1 VAL A 483 ? ? -34.55 128.30 11 1 CYS A 488 ? ? -169.97 85.28 12 1 PHE A 490 ? ? -90.14 -143.03 13 1 PRO A 491 ? ? -109.37 -138.29 14 1 GLN A 493 ? ? -75.67 -152.25 15 1 THR A 500 ? ? -90.93 33.73 16 1 CYS B 22 ? ? -151.75 69.65 17 1 SER B 33 ? ? 70.49 -2.90 18 1 ILE B 53 ? ? -114.67 -168.63 19 1 TYR B 55 ? ? -54.70 -5.76 20 1 ALA B 93 ? ? 177.66 176.54 21 1 ARG B 102 ? ? 44.87 -145.37 22 1 SER B 103 ? ? -78.39 -122.74 23 1 ALA B 104 ? ? -100.48 -163.96 24 1 SER B 109 ? ? 74.64 -3.31 25 1 ARG B 113 ? ? -158.47 55.69 26 1 ASP B 114 ? ? 53.70 -67.81 27 1 GLU B 115 ? ? -147.22 40.35 28 1 ASN B 117 ? ? -139.78 -51.51 29 1 TRP B 118 ? ? -153.51 -149.95 30 1 PHE B 119 ? ? -102.49 -138.50 31 1 ASP B 120 ? ? -144.89 -71.04 32 1 VAL C 3 ? ? 155.07 142.47 33 1 ASN C 28 ? ? -112.49 -80.03 34 1 ASP C 34 ? ? 29.74 155.04 35 1 ASN C 53 ? ? 69.28 -46.54 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A PHE 342 ? CG ? A PHE 7 CG 2 1 Y 1 A PHE 342 ? CD1 ? A PHE 7 CD1 3 1 Y 1 A PHE 342 ? CD2 ? A PHE 7 CD2 4 1 Y 1 A PHE 342 ? CE1 ? A PHE 7 CE1 5 1 Y 1 A PHE 342 ? CE2 ? A PHE 7 CE2 6 1 Y 1 A PHE 342 ? CZ ? A PHE 7 CZ 7 1 Y 1 A ARG 346 ? CG ? A ARG 11 CG 8 1 Y 1 A ARG 346 ? CD ? A ARG 11 CD 9 1 Y 1 A ARG 346 ? NE ? A ARG 11 NE 10 1 Y 1 A ARG 346 ? CZ ? A ARG 11 CZ 11 1 Y 1 A ARG 346 ? NH1 ? A ARG 11 NH1 12 1 Y 1 A ARG 346 ? NH2 ? A ARG 11 NH2 13 1 Y 1 A PHE 347 ? CG ? A PHE 12 CG 14 1 Y 1 A PHE 347 ? CD1 ? A PHE 12 CD1 15 1 Y 1 A PHE 347 ? CD2 ? A PHE 12 CD2 16 1 Y 1 A PHE 347 ? CE1 ? A PHE 12 CE1 17 1 Y 1 A PHE 347 ? CE2 ? A PHE 12 CE2 18 1 Y 1 A PHE 347 ? CZ ? A PHE 12 CZ 19 1 Y 1 A TYR 351 ? CG ? A TYR 16 CG 20 1 Y 1 A TYR 351 ? CD1 ? A TYR 16 CD1 21 1 Y 1 A TYR 351 ? CD2 ? A TYR 16 CD2 22 1 Y 1 A TYR 351 ? CE1 ? A TYR 16 CE1 23 1 Y 1 A TYR 351 ? CE2 ? A TYR 16 CE2 24 1 Y 1 A TYR 351 ? CZ ? A TYR 16 CZ 25 1 Y 1 A TYR 351 ? OH ? A TYR 16 OH 26 1 Y 1 A ARG 357 ? CG ? A ARG 22 CG 27 1 Y 1 A ARG 357 ? CD ? A ARG 22 CD 28 1 Y 1 A ARG 357 ? NE ? A ARG 22 NE 29 1 Y 1 A ARG 357 ? CZ ? A ARG 22 CZ 30 1 Y 1 A ARG 357 ? NH1 ? A ARG 22 NH1 31 1 Y 1 A ARG 357 ? NH2 ? A ARG 22 NH2 32 1 Y 1 A ASP 364 ? CG ? A ASP 29 CG 33 1 Y 1 A ASP 364 ? OD1 ? A ASP 29 OD1 34 1 Y 1 A ASP 364 ? OD2 ? A ASP 29 OD2 35 1 Y 1 A PHE 377 ? CG ? A PHE 42 CG 36 1 Y 1 A PHE 377 ? CD1 ? A PHE 42 CD1 37 1 Y 1 A PHE 377 ? CD2 ? A PHE 42 CD2 38 1 Y 1 A PHE 377 ? CE1 ? A PHE 42 CE1 39 1 Y 1 A PHE 377 ? CE2 ? A PHE 42 CE2 40 1 Y 1 A PHE 377 ? CZ ? A PHE 42 CZ 41 1 Y 1 A TYR 380 ? CG ? A TYR 45 CG 42 1 Y 1 A TYR 380 ? CD1 ? A TYR 45 CD1 43 1 Y 1 A TYR 380 ? CD2 ? A TYR 45 CD2 44 1 Y 1 A TYR 380 ? CE1 ? A TYR 45 CE1 45 1 Y 1 A TYR 380 ? CE2 ? A TYR 45 CE2 46 1 Y 1 A TYR 380 ? CZ ? A TYR 45 CZ 47 1 Y 1 A TYR 380 ? OH ? A TYR 45 OH 48 1 Y 1 A LEU 387 ? CG ? A LEU 52 CG 49 1 Y 1 A LEU 387 ? CD1 ? A LEU 52 CD1 50 1 Y 1 A LEU 387 ? CD2 ? A LEU 52 CD2 51 1 Y 1 A PHE 400 ? CG ? A PHE 65 CG 52 1 Y 1 A PHE 400 ? CD1 ? A PHE 65 CD1 53 1 Y 1 A PHE 400 ? CD2 ? A PHE 65 CD2 54 1 Y 1 A PHE 400 ? CE1 ? A PHE 65 CE1 55 1 Y 1 A PHE 400 ? CE2 ? A PHE 65 CE2 56 1 Y 1 A PHE 400 ? CZ ? A PHE 65 CZ 57 1 Y 1 A ARG 403 ? CG ? A ARG 68 CG 58 1 Y 1 A ARG 403 ? CD ? A ARG 68 CD 59 1 Y 1 A ARG 403 ? NE ? A ARG 68 NE 60 1 Y 1 A ARG 403 ? CZ ? A ARG 68 CZ 61 1 Y 1 A ARG 403 ? NH1 ? A ARG 68 NH1 62 1 Y 1 A ARG 403 ? NH2 ? A ARG 68 NH2 63 1 Y 1 A ASP 405 ? CG ? A ASP 70 CG 64 1 Y 1 A ASP 405 ? OD1 ? A ASP 70 OD1 65 1 Y 1 A ASP 405 ? OD2 ? A ASP 70 OD2 66 1 Y 1 A ARG 408 ? CG ? A ARG 73 CG 67 1 Y 1 A ARG 408 ? CD ? A ARG 73 CD 68 1 Y 1 A ARG 408 ? NE ? A ARG 73 NE 69 1 Y 1 A ARG 408 ? CZ ? A ARG 73 CZ 70 1 Y 1 A ARG 408 ? NH1 ? A ARG 73 NH1 71 1 Y 1 A ARG 408 ? NH2 ? A ARG 73 NH2 72 1 Y 1 A GLN 409 ? CG ? A GLN 74 CG 73 1 Y 1 A GLN 409 ? CD ? A GLN 74 CD 74 1 Y 1 A GLN 409 ? OE1 ? A GLN 74 OE1 75 1 Y 1 A GLN 409 ? NE2 ? A GLN 74 NE2 76 1 Y 1 A ILE 410 ? CG1 ? A ILE 75 CG1 77 1 Y 1 A ILE 410 ? CG2 ? A ILE 75 CG2 78 1 Y 1 A ILE 410 ? CD1 ? A ILE 75 CD1 79 1 Y 1 A GLN 414 ? CG ? A GLN 79 CG 80 1 Y 1 A GLN 414 ? CD ? A GLN 79 CD 81 1 Y 1 A GLN 414 ? OE1 ? A GLN 79 OE1 82 1 Y 1 A GLN 414 ? NE2 ? A GLN 79 NE2 83 1 Y 1 A THR 415 ? OG1 ? A THR 80 OG1 84 1 Y 1 A THR 415 ? CG2 ? A THR 80 CG2 85 1 Y 1 A ASP 420 ? CG ? A ASP 85 CG 86 1 Y 1 A ASP 420 ? OD1 ? A ASP 85 OD1 87 1 Y 1 A ASP 420 ? OD2 ? A ASP 85 OD2 88 1 Y 1 A TYR 421 ? CG ? A TYR 86 CG 89 1 Y 1 A TYR 421 ? CD1 ? A TYR 86 CD1 90 1 Y 1 A TYR 421 ? CD2 ? A TYR 86 CD2 91 1 Y 1 A TYR 421 ? CE1 ? A TYR 86 CE1 92 1 Y 1 A TYR 421 ? CE2 ? A TYR 86 CE2 93 1 Y 1 A TYR 421 ? CZ ? A TYR 86 CZ 94 1 Y 1 A TYR 421 ? OH ? A TYR 86 OH 95 1 Y 1 A ASN 422 ? CG ? A ASN 87 CG 96 1 Y 1 A ASN 422 ? OD1 ? A ASN 87 OD1 97 1 Y 1 A ASN 422 ? ND2 ? A ASN 87 ND2 98 1 Y 1 A LYS 424 ? CG ? A LYS 89 CG 99 1 Y 1 A LYS 424 ? CD ? A LYS 89 CD 100 1 Y 1 A LYS 424 ? CE ? A LYS 89 CE 101 1 Y 1 A LYS 424 ? NZ ? A LYS 89 NZ 102 1 Y 1 A ASP 427 ? CG ? A ASP 92 CG 103 1 Y 1 A ASP 427 ? OD1 ? A ASP 92 OD1 104 1 Y 1 A ASP 427 ? OD2 ? A ASP 92 OD2 105 1 Y 1 A ASP 428 ? CG ? A ASP 93 CG 106 1 Y 1 A ASP 428 ? OD1 ? A ASP 93 OD1 107 1 Y 1 A ASP 428 ? OD2 ? A ASP 93 OD2 108 1 Y 1 A PHE 429 ? CG ? A PHE 94 CG 109 1 Y 1 A PHE 429 ? CD1 ? A PHE 94 CD1 110 1 Y 1 A PHE 429 ? CD2 ? A PHE 94 CD2 111 1 Y 1 A PHE 429 ? CE1 ? A PHE 94 CE1 112 1 Y 1 A PHE 429 ? CE2 ? A PHE 94 CE2 113 1 Y 1 A PHE 429 ? CZ ? A PHE 94 CZ 114 1 Y 1 A LYS 444 ? CG ? A LYS 109 CG 115 1 Y 1 A LYS 444 ? CD ? A LYS 109 CD 116 1 Y 1 A LYS 444 ? CE ? A LYS 109 CE 117 1 Y 1 A LYS 444 ? NZ ? A LYS 109 NZ 118 1 Y 1 A ASN 448 ? CG ? A ASN 113 CG 119 1 Y 1 A ASN 448 ? OD1 ? A ASN 113 OD1 120 1 Y 1 A ASN 448 ? ND2 ? A ASN 113 ND2 121 1 Y 1 A ASN 450 ? CG ? A ASN 115 CG 122 1 Y 1 A ASN 450 ? OD1 ? A ASN 115 OD1 123 1 Y 1 A ASN 450 ? ND2 ? A ASN 115 ND2 124 1 Y 1 A TYR 451 ? CG ? A TYR 116 CG 125 1 Y 1 A TYR 451 ? CD1 ? A TYR 116 CD1 126 1 Y 1 A TYR 451 ? CD2 ? A TYR 116 CD2 127 1 Y 1 A TYR 451 ? CE1 ? A TYR 116 CE1 128 1 Y 1 A TYR 451 ? CE2 ? A TYR 116 CE2 129 1 Y 1 A TYR 451 ? CZ ? A TYR 116 CZ 130 1 Y 1 A TYR 451 ? OH ? A TYR 116 OH 131 1 Y 1 A LEU 452 ? CG ? A LEU 117 CG 132 1 Y 1 A LEU 452 ? CD1 ? A LEU 117 CD1 133 1 Y 1 A LEU 452 ? CD2 ? A LEU 117 CD2 134 1 Y 1 A TYR 453 ? CG ? A TYR 118 CG 135 1 Y 1 A TYR 453 ? CD1 ? A TYR 118 CD1 136 1 Y 1 A TYR 453 ? CD2 ? A TYR 118 CD2 137 1 Y 1 A TYR 453 ? CE1 ? A TYR 118 CE1 138 1 Y 1 A TYR 453 ? CE2 ? A TYR 118 CE2 139 1 Y 1 A TYR 453 ? CZ ? A TYR 118 CZ 140 1 Y 1 A TYR 453 ? OH ? A TYR 118 OH 141 1 Y 1 A ARG 457 ? CG ? A ARG 122 CG 142 1 Y 1 A ARG 457 ? CD ? A ARG 122 CD 143 1 Y 1 A ARG 457 ? NE ? A ARG 122 NE 144 1 Y 1 A ARG 457 ? CZ ? A ARG 122 CZ 145 1 Y 1 A ARG 457 ? NH1 ? A ARG 122 NH1 146 1 Y 1 A ARG 457 ? NH2 ? A ARG 122 NH2 147 1 Y 1 A LYS 458 ? CG ? A LYS 123 CG 148 1 Y 1 A LYS 458 ? CD ? A LYS 123 CD 149 1 Y 1 A LYS 458 ? CE ? A LYS 123 CE 150 1 Y 1 A LYS 458 ? NZ ? A LYS 123 NZ 151 1 Y 1 A ASN 460 ? CG ? A ASN 125 CG 152 1 Y 1 A ASN 460 ? OD1 ? A ASN 125 OD1 153 1 Y 1 A ASN 460 ? ND2 ? A ASN 125 ND2 154 1 Y 1 A LYS 462 ? CG ? A LYS 127 CG 155 1 Y 1 A LYS 462 ? CD ? A LYS 127 CD 156 1 Y 1 A LYS 462 ? CE ? A LYS 127 CE 157 1 Y 1 A LYS 462 ? NZ ? A LYS 127 NZ 158 1 Y 1 A PRO 463 ? CG ? A PRO 128 CG 159 1 Y 1 A PRO 463 ? CD ? A PRO 128 CD 160 1 Y 1 A PHE 464 ? CG ? A PHE 129 CG 161 1 Y 1 A PHE 464 ? CD1 ? A PHE 129 CD1 162 1 Y 1 A PHE 464 ? CD2 ? A PHE 129 CD2 163 1 Y 1 A PHE 464 ? CE1 ? A PHE 129 CE1 164 1 Y 1 A PHE 464 ? CE2 ? A PHE 129 CE2 165 1 Y 1 A PHE 464 ? CZ ? A PHE 129 CZ 166 1 Y 1 A ARG 466 ? CG ? A ARG 131 CG 167 1 Y 1 A ARG 466 ? CD ? A ARG 131 CD 168 1 Y 1 A ARG 466 ? NE ? A ARG 131 NE 169 1 Y 1 A ARG 466 ? CZ ? A ARG 131 CZ 170 1 Y 1 A ARG 466 ? NH1 ? A ARG 131 NH1 171 1 Y 1 A ARG 466 ? NH2 ? A ARG 131 NH2 172 1 Y 1 A ASP 467 ? CG ? A ASP 132 CG 173 1 Y 1 A ASP 467 ? OD1 ? A ASP 132 OD1 174 1 Y 1 A ASP 467 ? OD2 ? A ASP 132 OD2 175 1 Y 1 A ILE 468 ? CG1 ? A ILE 133 CG1 176 1 Y 1 A ILE 468 ? CG2 ? A ILE 133 CG2 177 1 Y 1 A ILE 468 ? CD1 ? A ILE 133 CD1 178 1 Y 1 A TYR 473 ? CG ? A TYR 138 CG 179 1 Y 1 A TYR 473 ? CD1 ? A TYR 138 CD1 180 1 Y 1 A TYR 473 ? CD2 ? A TYR 138 CD2 181 1 Y 1 A TYR 473 ? CE1 ? A TYR 138 CE1 182 1 Y 1 A TYR 473 ? CE2 ? A TYR 138 CE2 183 1 Y 1 A TYR 473 ? CZ ? A TYR 138 CZ 184 1 Y 1 A TYR 473 ? OH ? A TYR 138 OH 185 1 Y 1 A GLN 474 ? CG ? A GLN 139 CG 186 1 Y 1 A GLN 474 ? CD ? A GLN 139 CD 187 1 Y 1 A GLN 474 ? OE1 ? A GLN 139 OE1 188 1 Y 1 A GLN 474 ? NE2 ? A GLN 139 NE2 189 1 Y 1 A SER 494 ? OG ? A SER 159 OG 190 1 Y 1 A TYR 505 ? CG ? A TYR 170 CG 191 1 Y 1 A TYR 505 ? CD1 ? A TYR 170 CD1 192 1 Y 1 A TYR 505 ? CD2 ? A TYR 170 CD2 193 1 Y 1 A TYR 505 ? CE1 ? A TYR 170 CE1 194 1 Y 1 A TYR 505 ? CE2 ? A TYR 170 CE2 195 1 Y 1 A TYR 505 ? CZ ? A TYR 170 CZ 196 1 Y 1 A TYR 505 ? OH ? A TYR 170 OH 197 1 Y 1 B SER 19 ? OG ? B SER 19 OG 198 1 Y 1 B TRP 36 ? CG ? B TRP 36 CG 199 1 Y 1 B TRP 36 ? CD1 ? B TRP 36 CD1 200 1 Y 1 B TRP 36 ? CD2 ? B TRP 36 CD2 201 1 Y 1 B TRP 36 ? NE1 ? B TRP 36 NE1 202 1 Y 1 B TRP 36 ? CE2 ? B TRP 36 CE2 203 1 Y 1 B TRP 36 ? CE3 ? B TRP 36 CE3 204 1 Y 1 B TRP 36 ? CZ2 ? B TRP 36 CZ2 205 1 Y 1 B TRP 36 ? CZ3 ? B TRP 36 CZ3 206 1 Y 1 B TRP 36 ? CH2 ? B TRP 36 CH2 207 1 Y 1 B TRP 38 ? CG ? B TRP 38 CG 208 1 Y 1 B TRP 38 ? CD1 ? B TRP 38 CD1 209 1 Y 1 B TRP 38 ? CD2 ? B TRP 38 CD2 210 1 Y 1 B TRP 38 ? NE1 ? B TRP 38 NE1 211 1 Y 1 B TRP 38 ? CE2 ? B TRP 38 CE2 212 1 Y 1 B TRP 38 ? CE3 ? B TRP 38 CE3 213 1 Y 1 B TRP 38 ? CZ2 ? B TRP 38 CZ2 214 1 Y 1 B TRP 38 ? CZ3 ? B TRP 38 CZ3 215 1 Y 1 B TRP 38 ? CH2 ? B TRP 38 CH2 216 1 Y 1 B ARG 40 ? CG ? B ARG 40 CG 217 1 Y 1 B ARG 40 ? CD ? B ARG 40 CD 218 1 Y 1 B ARG 40 ? NE ? B ARG 40 NE 219 1 Y 1 B ARG 40 ? CZ ? B ARG 40 CZ 220 1 Y 1 B ARG 40 ? NH1 ? B ARG 40 NH1 221 1 Y 1 B ARG 40 ? NH2 ? B ARG 40 NH2 222 1 Y 1 B GLU 48 ? CG ? B GLU 48 CG 223 1 Y 1 B GLU 48 ? CD ? B GLU 48 CD 224 1 Y 1 B GLU 48 ? OE1 ? B GLU 48 OE1 225 1 Y 1 B GLU 48 ? OE2 ? B GLU 48 OE2 226 1 Y 1 B ILE 53 ? CG1 ? B ILE 53 CG1 227 1 Y 1 B ILE 53 ? CG2 ? B ILE 53 CG2 228 1 Y 1 B ILE 53 ? CD1 ? B ILE 53 CD1 229 1 Y 1 B TYR 54 ? CG ? B TYR 54 CG 230 1 Y 1 B TYR 54 ? CD1 ? B TYR 54 CD1 231 1 Y 1 B TYR 54 ? CD2 ? B TYR 54 CD2 232 1 Y 1 B TYR 54 ? CE1 ? B TYR 54 CE1 233 1 Y 1 B TYR 54 ? CE2 ? B TYR 54 CE2 234 1 Y 1 B TYR 54 ? CZ ? B TYR 54 CZ 235 1 Y 1 B TYR 54 ? OH ? B TYR 54 OH 236 1 Y 1 B VAL 73 ? CG1 ? B VAL 73 CG1 237 1 Y 1 B VAL 73 ? CG2 ? B VAL 73 CG2 238 1 Y 1 B PHE 80 ? CG ? B PHE 80 CG 239 1 Y 1 B PHE 80 ? CD1 ? B PHE 80 CD1 240 1 Y 1 B PHE 80 ? CD2 ? B PHE 80 CD2 241 1 Y 1 B PHE 80 ? CE1 ? B PHE 80 CE1 242 1 Y 1 B PHE 80 ? CE2 ? B PHE 80 CE2 243 1 Y 1 B PHE 80 ? CZ ? B PHE 80 CZ 244 1 Y 1 B VAL 87 ? CG1 ? B VAL 87 CG1 245 1 Y 1 B VAL 87 ? CG2 ? B VAL 87 CG2 246 1 Y 1 B ARG 99 ? CG ? B ARG 99 CG 247 1 Y 1 B ARG 99 ? CD ? B ARG 99 CD 248 1 Y 1 B ARG 99 ? NE ? B ARG 99 NE 249 1 Y 1 B ARG 99 ? CZ ? B ARG 99 CZ 250 1 Y 1 B ARG 99 ? NH1 ? B ARG 99 NH1 251 1 Y 1 B ARG 99 ? NH2 ? B ARG 99 NH2 252 1 Y 1 B ASN 117 ? CG ? B ASN 117 CG 253 1 Y 1 B ASN 117 ? OD1 ? B ASN 117 OD1 254 1 Y 1 B ASN 117 ? ND2 ? B ASN 117 ND2 255 1 Y 1 B TRP 118 ? CG ? B TRP 118 CG 256 1 Y 1 B TRP 118 ? CD1 ? B TRP 118 CD1 257 1 Y 1 B TRP 118 ? CD2 ? B TRP 118 CD2 258 1 Y 1 B TRP 118 ? NE1 ? B TRP 118 NE1 259 1 Y 1 B TRP 118 ? CE2 ? B TRP 118 CE2 260 1 Y 1 B TRP 118 ? CE3 ? B TRP 118 CE3 261 1 Y 1 B TRP 118 ? CZ2 ? B TRP 118 CZ2 262 1 Y 1 B TRP 118 ? CZ3 ? B TRP 118 CZ3 263 1 Y 1 B TRP 118 ? CH2 ? B TRP 118 CH2 264 1 Y 1 B PHE 119 ? CG ? B PHE 119 CG 265 1 Y 1 B PHE 119 ? CD1 ? B PHE 119 CD1 266 1 Y 1 B PHE 119 ? CD2 ? B PHE 119 CD2 267 1 Y 1 B PHE 119 ? CE1 ? B PHE 119 CE1 268 1 Y 1 B PHE 119 ? CE2 ? B PHE 119 CE2 269 1 Y 1 B PHE 119 ? CZ ? B PHE 119 CZ 270 1 Y 1 C VAL 3 ? CG1 ? C VAL 3 CG1 271 1 Y 1 C VAL 3 ? CG2 ? C VAL 3 CG2 272 1 Y 1 C VAL 10 ? CG1 ? C VAL 10 CG1 273 1 Y 1 C VAL 10 ? CG2 ? C VAL 10 CG2 274 1 Y 1 C VAL 18 ? CG1 ? C VAL 18 CG1 275 1 Y 1 C VAL 18 ? CG2 ? C VAL 18 CG2 276 1 Y 1 C ASN 28 ? CG ? C ASN 28 CG 277 1 Y 1 C ASN 28 ? OD1 ? C ASN 28 OD1 278 1 Y 1 C ASN 28 ? ND2 ? C ASN 28 ND2 279 1 Y 1 C HIS 36 ? CG ? C HIS 36 CG 280 1 Y 1 C HIS 36 ? ND1 ? C HIS 36 ND1 281 1 Y 1 C HIS 36 ? CD2 ? C HIS 36 CD2 282 1 Y 1 C HIS 36 ? CE1 ? C HIS 36 CE1 283 1 Y 1 C HIS 36 ? NE2 ? C HIS 36 NE2 284 1 Y 1 C GLN 39 ? CG ? C GLN 39 CG 285 1 Y 1 C GLN 39 ? CD ? C GLN 39 CD 286 1 Y 1 C GLN 39 ? OE1 ? C GLN 39 OE1 287 1 Y 1 C GLN 39 ? NE2 ? C GLN 39 NE2 288 1 Y 1 C LEU 48 ? CG ? C LEU 48 CG 289 1 Y 1 C LEU 48 ? CD1 ? C LEU 48 CD1 290 1 Y 1 C LEU 48 ? CD2 ? C LEU 48 CD2 291 1 Y 1 C LEU 49 ? CG ? C LEU 49 CG 292 1 Y 1 C LEU 49 ? CD1 ? C LEU 49 CD1 293 1 Y 1 C LEU 49 ? CD2 ? C LEU 49 CD2 294 1 Y 1 C ILE 50 ? CG1 ? C ILE 50 CG1 295 1 Y 1 C ILE 50 ? CG2 ? C ILE 50 CG2 296 1 Y 1 C ILE 50 ? CD1 ? C ILE 50 CD1 297 1 Y 1 C TYR 51 ? CG ? C TYR 51 CG 298 1 Y 1 C TYR 51 ? CD1 ? C TYR 51 CD1 299 1 Y 1 C TYR 51 ? CD2 ? C TYR 51 CD2 300 1 Y 1 C TYR 51 ? CE1 ? C TYR 51 CE1 301 1 Y 1 C TYR 51 ? CE2 ? C TYR 51 CE2 302 1 Y 1 C TYR 51 ? CZ ? C TYR 51 CZ 303 1 Y 1 C TYR 51 ? OH ? C TYR 51 OH 304 1 Y 1 C ARG 56 ? CG ? C ARG 56 CG 305 1 Y 1 C ARG 56 ? CD ? C ARG 56 CD 306 1 Y 1 C ARG 56 ? NE ? C ARG 56 NE 307 1 Y 1 C ARG 56 ? CZ ? C ARG 56 CZ 308 1 Y 1 C ARG 56 ? NH1 ? C ARG 56 NH1 309 1 Y 1 C ARG 56 ? NH2 ? C ARG 56 NH2 310 1 Y 1 C ASP 62 ? CG ? C ASP 62 CG 311 1 Y 1 C ASP 62 ? OD1 ? C ASP 62 OD1 312 1 Y 1 C ASP 62 ? OD2 ? C ASP 62 OD2 313 1 Y 1 C PHE 64 ? CG ? C PHE 64 CG 314 1 Y 1 C PHE 64 ? CD1 ? C PHE 64 CD1 315 1 Y 1 C PHE 64 ? CD2 ? C PHE 64 CD2 316 1 Y 1 C PHE 64 ? CE1 ? C PHE 64 CE1 317 1 Y 1 C PHE 64 ? CE2 ? C PHE 64 CE2 318 1 Y 1 C PHE 64 ? CZ ? C PHE 64 CZ 319 1 Y 1 C SER 72 ? OG ? C SER 72 OG 320 1 Y 1 C LEU 80 ? CG ? C LEU 80 CG 321 1 Y 1 C LEU 80 ? CD1 ? C LEU 80 CD1 322 1 Y 1 C LEU 80 ? CD2 ? C LEU 80 CD2 323 1 Y 1 C GLN 81 ? CG ? C GLN 81 CG 324 1 Y 1 C GLN 81 ? CD ? C GLN 81 CD 325 1 Y 1 C GLN 81 ? OE1 ? C GLN 81 OE1 326 1 Y 1 C GLN 81 ? NE2 ? C GLN 81 NE2 327 1 Y 1 C GLU 85 ? CG ? C GLU 85 CG 328 1 Y 1 C GLU 85 ? CD ? C GLU 85 CD 329 1 Y 1 C GLU 85 ? OE1 ? C GLU 85 OE1 330 1 Y 1 C GLU 85 ? OE2 ? C GLU 85 OE2 331 1 Y 1 C VAL 108 ? CG1 ? C VAL 108 CG1 332 1 Y 1 C VAL 108 ? CG2 ? C VAL 108 CG2 333 1 Y 1 C VAL 110 ? CG1 ? C VAL 110 CG1 334 1 Y 1 C VAL 110 ? CG2 ? C VAL 110 CG2 # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # loop_ _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue 1 2 ? ? 2697049 ? ? 'Severe acute respiratory syndrome coronavirus 2' ? ? 2 3 ? ? 9606 ? ? 'Homo sapiens' ? ? # loop_ _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain 1 2 ? 9606 'Homo sapiens' ? ? 2 3 ? 9606 'Homo sapiens' ? ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 60.00 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? _em_image_recording.avg_electron_dose_per_subtomogram ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'SYMMETRY DETERMINATION' ? ? ? 1 1 1 2 'IMAGE ACQUISITION' ? ? ? 1 ? 1 3 MASKING ? ? ? 1 ? 1 4 'CTF CORRECTION' ? ? ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? 1 ? 1 6 'DIFFRACTION INDEXING' ? ? ? 1 ? 1 7 'MODEL FITTING' ? ? ? 1 ? 1 8 'MODEL REFINEMENT' ? ? ? 1 ? 1 9 OTHER ? ? ? 1 ? 1 10 'INITIAL EULER ASSIGNMENT' ? ? ? 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? ? ? 1 ? ? 12 CLASSIFICATION ? ? ? 1 ? ? 13 RECONSTRUCTION ? ? ? 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ? #