data_7YMJ # _entry.id 7YMJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.370 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7YMJ pdb_00007ymj 10.2210/pdb7ymj/pdb WWPDB D_1300031258 ? ? EMDB EMD-33930 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 7YM8 unspecified PDB . 7YMH unspecified EMDB . EMD-33924 'other EM volume' EMDB . EMD-33928 'other EM volume' EMDB 'Cryo-EM structure of alpha1AAR-Nb6 complex bound to tamsulosin' EMD-33930 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7YMJ _pdbx_database_status.recvd_initial_deposition_date 2022-07-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Toyoda, Y.' 1 ? 'Zhu, A.' 2 ? 'Yan, C.' 3 ? 'Kobilka, B.K.' 4 ? 'Liu, X.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 14 _citation.language ? _citation.page_first 3655 _citation.page_last 3655 _citation.title 'Structural basis of alpha 1A -adrenergic receptor activation and recognition by an extracellular nanobody.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-023-39310-x _citation.pdbx_database_id_PubMed 37339967 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Toyoda, Y.' 1 0000-0002-2245-4666 primary 'Zhu, A.' 2 0000-0002-3162-441X primary 'Kong, F.' 3 0000-0001-8788-722X primary 'Shan, S.' 4 ? primary 'Zhao, J.' 5 ? primary 'Wang, N.' 6 ? primary 'Sun, X.' 7 ? primary 'Zhang, L.' 8 ? primary 'Yan, C.' 9 0000-0001-9338-8048 primary 'Kobilka, B.K.' 10 0000-0001-5958-3990 primary 'Liu, X.' 11 0000-0003-3178-9238 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7YMJ _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 7YMJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'alpha1A-adrenergic receptor' 40804.180 1 ? ? ? ? 2 polymer man Nb6 16515.590 1 ? ? ? ? 3 non-polymer syn Tamsulosin 408.512 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MKTIIALSYIFCLVFADYKDDDDAMVFLSGQASDSSQCTQPPAPVQISKAILLGVILGGLILFGVLGNILVILSVACHRH LHSVTHYYIVNLAVADLLLTSTVLPFSAIFEVLGYWAFGRVFCNIWAAVDVLCCTARIWGLCIISIDRYIGVSYPLRYPT IVTQRRGLMALLCVWALSLVISIGPLFGWRQPAPEDETICQINEEPGYVLFSALGSFYLPLAIILVMYTLMILRLKSVRL LSGSREKDRNLRRITRLVLIVVGCFVLCWLPFFLVMPIGSFFPDFKPSETVFKIVFWLGYLNSCINPIIYPCSSQEFKKA FQNVLRIQCLCRKQSSKHALGYTLHPPSQAVEGQHHHHHHHH ; ;MKTIIALSYIFCLVFADYKDDDDAMVFLSGQASDSSQCTQPPAPVQISKAILLGVILGGLILFGVLGNILVILSVACHRH LHSVTHYYIVNLAVADLLLTSTVLPFSAIFEVLGYWAFGRVFCNIWAAVDVLCCTARIWGLCIISIDRYIGVSYPLRYPT IVTQRRGLMALLCVWALSLVISIGPLFGWRQPAPEDETICQINEEPGYVLFSALGSFYLPLAIILVMYTLMILRLKSVRL LSGSREKDRNLRRITRLVLIVVGCFVLCWLPFFLVMPIGSFFPDFKPSETVFKIVFWLGYLNSCINPIIYPCSSQEFKKA FQNVLRIQCLCRKQSSKHALGYTLHPPSQAVEGQHHHHHHHH ; A ? 2 'polypeptide(L)' no no ;MKYLLPTAAAGLLLLAAQPAMAMAQVQLQESGGGLVQAGESLRLSCAASGTIFRLYDMGWYRRVSGNQRELVASITSGGS TKYGDSVKGRFTISRDNAKNTVYLQMSSLKPEDTAVYYCNAEYRTGIWEELLDGWGQGTQVTVSSHHHHHH ; ;MKYLLPTAAAGLLLLAAQPAMAMAQVQLQESGGGLVQAGESLRLSCAASGTIFRLYDMGWYRRVSGNQRELVASITSGGS TKYGDSVKGRFTISRDNAKNTVYLQMSSLKPEDTAVYYCNAEYRTGIWEELLDGWGQGTQVTVSSHHHHHH ; D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 THR n 1 4 ILE n 1 5 ILE n 1 6 ALA n 1 7 LEU n 1 8 SER n 1 9 TYR n 1 10 ILE n 1 11 PHE n 1 12 CYS n 1 13 LEU n 1 14 VAL n 1 15 PHE n 1 16 ALA n 1 17 ASP n 1 18 TYR n 1 19 LYS n 1 20 ASP n 1 21 ASP n 1 22 ASP n 1 23 ASP n 1 24 ALA n 1 25 MET n 1 26 VAL n 1 27 PHE n 1 28 LEU n 1 29 SER n 1 30 GLY n 1 31 GLN n 1 32 ALA n 1 33 SER n 1 34 ASP n 1 35 SER n 1 36 SER n 1 37 GLN n 1 38 CYS n 1 39 THR n 1 40 GLN n 1 41 PRO n 1 42 PRO n 1 43 ALA n 1 44 PRO n 1 45 VAL n 1 46 GLN n 1 47 ILE n 1 48 SER n 1 49 LYS n 1 50 ALA n 1 51 ILE n 1 52 LEU n 1 53 LEU n 1 54 GLY n 1 55 VAL n 1 56 ILE n 1 57 LEU n 1 58 GLY n 1 59 GLY n 1 60 LEU n 1 61 ILE n 1 62 LEU n 1 63 PHE n 1 64 GLY n 1 65 VAL n 1 66 LEU n 1 67 GLY n 1 68 ASN n 1 69 ILE n 1 70 LEU n 1 71 VAL n 1 72 ILE n 1 73 LEU n 1 74 SER n 1 75 VAL n 1 76 ALA n 1 77 CYS n 1 78 HIS n 1 79 ARG n 1 80 HIS n 1 81 LEU n 1 82 HIS n 1 83 SER n 1 84 VAL n 1 85 THR n 1 86 HIS n 1 87 TYR n 1 88 TYR n 1 89 ILE n 1 90 VAL n 1 91 ASN n 1 92 LEU n 1 93 ALA n 1 94 VAL n 1 95 ALA n 1 96 ASP n 1 97 LEU n 1 98 LEU n 1 99 LEU n 1 100 THR n 1 101 SER n 1 102 THR n 1 103 VAL n 1 104 LEU n 1 105 PRO n 1 106 PHE n 1 107 SER n 1 108 ALA n 1 109 ILE n 1 110 PHE n 1 111 GLU n 1 112 VAL n 1 113 LEU n 1 114 GLY n 1 115 TYR n 1 116 TRP n 1 117 ALA n 1 118 PHE n 1 119 GLY n 1 120 ARG n 1 121 VAL n 1 122 PHE n 1 123 CYS n 1 124 ASN n 1 125 ILE n 1 126 TRP n 1 127 ALA n 1 128 ALA n 1 129 VAL n 1 130 ASP n 1 131 VAL n 1 132 LEU n 1 133 CYS n 1 134 CYS n 1 135 THR n 1 136 ALA n 1 137 ARG n 1 138 ILE n 1 139 TRP n 1 140 GLY n 1 141 LEU n 1 142 CYS n 1 143 ILE n 1 144 ILE n 1 145 SER n 1 146 ILE n 1 147 ASP n 1 148 ARG n 1 149 TYR n 1 150 ILE n 1 151 GLY n 1 152 VAL n 1 153 SER n 1 154 TYR n 1 155 PRO n 1 156 LEU n 1 157 ARG n 1 158 TYR n 1 159 PRO n 1 160 THR n 1 161 ILE n 1 162 VAL n 1 163 THR n 1 164 GLN n 1 165 ARG n 1 166 ARG n 1 167 GLY n 1 168 LEU n 1 169 MET n 1 170 ALA n 1 171 LEU n 1 172 LEU n 1 173 CYS n 1 174 VAL n 1 175 TRP n 1 176 ALA n 1 177 LEU n 1 178 SER n 1 179 LEU n 1 180 VAL n 1 181 ILE n 1 182 SER n 1 183 ILE n 1 184 GLY n 1 185 PRO n 1 186 LEU n 1 187 PHE n 1 188 GLY n 1 189 TRP n 1 190 ARG n 1 191 GLN n 1 192 PRO n 1 193 ALA n 1 194 PRO n 1 195 GLU n 1 196 ASP n 1 197 GLU n 1 198 THR n 1 199 ILE n 1 200 CYS n 1 201 GLN n 1 202 ILE n 1 203 ASN n 1 204 GLU n 1 205 GLU n 1 206 PRO n 1 207 GLY n 1 208 TYR n 1 209 VAL n 1 210 LEU n 1 211 PHE n 1 212 SER n 1 213 ALA n 1 214 LEU n 1 215 GLY n 1 216 SER n 1 217 PHE n 1 218 TYR n 1 219 LEU n 1 220 PRO n 1 221 LEU n 1 222 ALA n 1 223 ILE n 1 224 ILE n 1 225 LEU n 1 226 VAL n 1 227 MET n 1 228 TYR n 1 229 THR n 1 230 LEU n 1 231 MET n 1 232 ILE n 1 233 LEU n 1 234 ARG n 1 235 LEU n 1 236 LYS n 1 237 SER n 1 238 VAL n 1 239 ARG n 1 240 LEU n 1 241 LEU n 1 242 SER n 1 243 GLY n 1 244 SER n 1 245 ARG n 1 246 GLU n 1 247 LYS n 1 248 ASP n 1 249 ARG n 1 250 ASN n 1 251 LEU n 1 252 ARG n 1 253 ARG n 1 254 ILE n 1 255 THR n 1 256 ARG n 1 257 LEU n 1 258 VAL n 1 259 LEU n 1 260 ILE n 1 261 VAL n 1 262 VAL n 1 263 GLY n 1 264 CYS n 1 265 PHE n 1 266 VAL n 1 267 LEU n 1 268 CYS n 1 269 TRP n 1 270 LEU n 1 271 PRO n 1 272 PHE n 1 273 PHE n 1 274 LEU n 1 275 VAL n 1 276 MET n 1 277 PRO n 1 278 ILE n 1 279 GLY n 1 280 SER n 1 281 PHE n 1 282 PHE n 1 283 PRO n 1 284 ASP n 1 285 PHE n 1 286 LYS n 1 287 PRO n 1 288 SER n 1 289 GLU n 1 290 THR n 1 291 VAL n 1 292 PHE n 1 293 LYS n 1 294 ILE n 1 295 VAL n 1 296 PHE n 1 297 TRP n 1 298 LEU n 1 299 GLY n 1 300 TYR n 1 301 LEU n 1 302 ASN n 1 303 SER n 1 304 CYS n 1 305 ILE n 1 306 ASN n 1 307 PRO n 1 308 ILE n 1 309 ILE n 1 310 TYR n 1 311 PRO n 1 312 CYS n 1 313 SER n 1 314 SER n 1 315 GLN n 1 316 GLU n 1 317 PHE n 1 318 LYS n 1 319 LYS n 1 320 ALA n 1 321 PHE n 1 322 GLN n 1 323 ASN n 1 324 VAL n 1 325 LEU n 1 326 ARG n 1 327 ILE n 1 328 GLN n 1 329 CYS n 1 330 LEU n 1 331 CYS n 1 332 ARG n 1 333 LYS n 1 334 GLN n 1 335 SER n 1 336 SER n 1 337 LYS n 1 338 HIS n 1 339 ALA n 1 340 LEU n 1 341 GLY n 1 342 TYR n 1 343 THR n 1 344 LEU n 1 345 HIS n 1 346 PRO n 1 347 PRO n 1 348 SER n 1 349 GLN n 1 350 ALA n 1 351 VAL n 1 352 GLU n 1 353 GLY n 1 354 GLN n 1 355 HIS n 1 356 HIS n 1 357 HIS n 1 358 HIS n 1 359 HIS n 1 360 HIS n 1 361 HIS n 1 362 HIS n 2 1 MET n 2 2 LYS n 2 3 TYR n 2 4 LEU n 2 5 LEU n 2 6 PRO n 2 7 THR n 2 8 ALA n 2 9 ALA n 2 10 ALA n 2 11 GLY n 2 12 LEU n 2 13 LEU n 2 14 LEU n 2 15 LEU n 2 16 ALA n 2 17 ALA n 2 18 GLN n 2 19 PRO n 2 20 ALA n 2 21 MET n 2 22 ALA n 2 23 MET n 2 24 ALA n 2 25 GLN n 2 26 VAL n 2 27 GLN n 2 28 LEU n 2 29 GLN n 2 30 GLU n 2 31 SER n 2 32 GLY n 2 33 GLY n 2 34 GLY n 2 35 LEU n 2 36 VAL n 2 37 GLN n 2 38 ALA n 2 39 GLY n 2 40 GLU n 2 41 SER n 2 42 LEU n 2 43 ARG n 2 44 LEU n 2 45 SER n 2 46 CYS n 2 47 ALA n 2 48 ALA n 2 49 SER n 2 50 GLY n 2 51 THR n 2 52 ILE n 2 53 PHE n 2 54 ARG n 2 55 LEU n 2 56 TYR n 2 57 ASP n 2 58 MET n 2 59 GLY n 2 60 TRP n 2 61 TYR n 2 62 ARG n 2 63 ARG n 2 64 VAL n 2 65 SER n 2 66 GLY n 2 67 ASN n 2 68 GLN n 2 69 ARG n 2 70 GLU n 2 71 LEU n 2 72 VAL n 2 73 ALA n 2 74 SER n 2 75 ILE n 2 76 THR n 2 77 SER n 2 78 GLY n 2 79 GLY n 2 80 SER n 2 81 THR n 2 82 LYS n 2 83 TYR n 2 84 GLY n 2 85 ASP n 2 86 SER n 2 87 VAL n 2 88 LYS n 2 89 GLY n 2 90 ARG n 2 91 PHE n 2 92 THR n 2 93 ILE n 2 94 SER n 2 95 ARG n 2 96 ASP n 2 97 ASN n 2 98 ALA n 2 99 LYS n 2 100 ASN n 2 101 THR n 2 102 VAL n 2 103 TYR n 2 104 LEU n 2 105 GLN n 2 106 MET n 2 107 SER n 2 108 SER n 2 109 LEU n 2 110 LYS n 2 111 PRO n 2 112 GLU n 2 113 ASP n 2 114 THR n 2 115 ALA n 2 116 VAL n 2 117 TYR n 2 118 TYR n 2 119 CYS n 2 120 ASN n 2 121 ALA n 2 122 GLU n 2 123 TYR n 2 124 ARG n 2 125 THR n 2 126 GLY n 2 127 ILE n 2 128 TRP n 2 129 GLU n 2 130 GLU n 2 131 LEU n 2 132 LEU n 2 133 ASP n 2 134 GLY n 2 135 TRP n 2 136 GLY n 2 137 GLN n 2 138 GLY n 2 139 THR n 2 140 GLN n 2 141 VAL n 2 142 THR n 2 143 VAL n 2 144 SER n 2 145 SER n 2 146 HIS n 2 147 HIS n 2 148 HIS n 2 149 HIS n 2 150 HIS n 2 151 HIS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 362 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 151 ? ? ? ? ? ? ? ? ? 'Lama glama' 9844 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 7YMJ 7YMJ ? 1 ? 1 2 PDB 7YMJ 7YMJ ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7YMJ A 1 ? 362 ? 7YMJ -23 ? 378 ? -23 378 2 2 7YMJ D 1 ? 151 ? 7YMJ -21 ? 129 ? -21 129 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 JGX non-polymer . Tamsulosin ? 'C20 H28 N2 O5 S' 408.512 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7YMJ _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 7YMJ _struct.title 'Cryo-EM structure of alpha1AAR-Nb6 complex bound to tamsulosin' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7YMJ _struct_keywords.text 'GPCR, Nanobody, Antagonist, Complex, MEMBRANE PROTEIN' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 49 ? HIS A 78 ? LYS A 25 HIS A 54 1 ? 30 HELX_P HELX_P2 AA2 THR A 85 ? VAL A 103 ? THR A 61 VAL A 79 1 ? 19 HELX_P HELX_P3 AA3 VAL A 103 ? GLY A 114 ? VAL A 79 GLY A 90 1 ? 12 HELX_P HELX_P4 AA4 VAL A 121 ? TYR A 154 ? VAL A 97 TYR A 130 1 ? 34 HELX_P HELX_P5 AA5 ARG A 157 ? VAL A 162 ? ARG A 133 VAL A 138 1 ? 6 HELX_P HELX_P6 AA6 THR A 163 ? ILE A 183 ? THR A 139 ILE A 159 1 ? 21 HELX_P HELX_P7 AA7 GLY A 184 ? GLY A 188 ? GLY A 160 GLY A 164 5 ? 5 HELX_P HELX_P8 AA8 GLU A 205 ? PHE A 217 ? GLU A 181 PHE A 193 1 ? 13 HELX_P HELX_P9 AA9 PHE A 217 ? VAL A 238 ? PHE A 193 VAL A 214 1 ? 22 HELX_P HELX_P10 AB1 SER A 244 ? PHE A 282 ? SER A 220 PHE A 298 1 ? 39 HELX_P HELX_P11 AB2 VAL A 291 ? PHE A 296 ? VAL A 307 PHE A 312 1 ? 6 HELX_P HELX_P12 AB3 TRP A 297 ? ASN A 306 ? TRP A 313 ASN A 322 1 ? 10 HELX_P HELX_P13 AB4 ILE A 308 ? SER A 313 ? ILE A 324 SER A 329 1 ? 6 HELX_P HELX_P14 AB5 GLN A 315 ? ILE A 327 ? GLN A 331 ILE A 343 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 123 SG ? ? ? 1_555 A CYS 200 SG ? ? A CYS 99 A CYS 176 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf2 disulf ? ? B CYS 46 SG ? ? ? 1_555 B CYS 119 SG ? ? D CYS 24 D CYS 97 1_555 ? ? ? ? ? ? ? 2.036 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 6 ? AA3 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN B 27 ? SER B 31 ? GLN D 5 SER D 9 AA1 2 SER B 41 ? SER B 49 ? SER D 19 SER D 27 AA1 3 THR B 101 ? SER B 107 ? THR D 79 SER D 85 AA1 4 THR B 92 ? ASP B 96 ? THR D 70 ASP D 74 AA2 1 GLY B 34 ? LEU B 35 ? GLY D 12 LEU D 13 AA2 2 THR B 139 ? THR B 142 ? THR D 117 THR D 120 AA2 3 ALA B 115 ? ARG B 124 ? ALA D 93 ARG D 102 AA2 4 ARG B 54 ? TYR B 61 ? ARG D 32 TYR D 39 AA2 5 LEU B 71 ? THR B 76 ? LEU D 49 THR D 54 AA2 6 LYS B 82 ? TYR B 83 ? LYS D 60 TYR D 61 AA3 1 GLY B 34 ? LEU B 35 ? GLY D 12 LEU D 13 AA3 2 THR B 139 ? THR B 142 ? THR D 117 THR D 120 AA3 3 ALA B 115 ? ARG B 124 ? ALA D 93 ARG D 102 AA3 4 LEU B 132 ? TRP B 135 ? LEU D 110 TRP D 113 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLN B 27 ? N GLN D 5 O SER B 49 ? O SER D 27 AA1 2 3 N LEU B 42 ? N LEU D 20 O MET B 106 ? O MET D 84 AA1 3 4 O TYR B 103 ? O TYR D 81 N SER B 94 ? N SER D 72 AA2 1 2 N GLY B 34 ? N GLY D 12 O THR B 142 ? O THR D 120 AA2 2 3 O THR B 139 ? O THR D 117 N TYR B 117 ? N TYR D 95 AA2 3 4 O TYR B 118 ? O TYR D 96 N TYR B 61 ? N TYR D 39 AA2 4 5 N TRP B 60 ? N TRP D 38 O ALA B 73 ? O ALA D 51 AA2 5 6 N SER B 74 ? N SER D 52 O LYS B 82 ? O LYS D 60 AA3 1 2 N GLY B 34 ? N GLY D 12 O THR B 142 ? O THR D 120 AA3 2 3 O THR B 139 ? O THR D 117 N TYR B 117 ? N TYR D 95 AA3 3 4 N ALA B 121 ? N ALA D 99 O GLY B 134 ? O GLY D 112 # _atom_sites.entry_id 7YMJ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -23 ? ? ? A . n A 1 2 LYS 2 -22 ? ? ? A . n A 1 3 THR 3 -21 ? ? ? A . n A 1 4 ILE 4 -20 ? ? ? A . n A 1 5 ILE 5 -19 ? ? ? A . n A 1 6 ALA 6 -18 ? ? ? A . n A 1 7 LEU 7 -17 ? ? ? A . n A 1 8 SER 8 -16 ? ? ? A . n A 1 9 TYR 9 -15 ? ? ? A . n A 1 10 ILE 10 -14 ? ? ? A . n A 1 11 PHE 11 -13 ? ? ? A . n A 1 12 CYS 12 -12 ? ? ? A . n A 1 13 LEU 13 -11 ? ? ? A . n A 1 14 VAL 14 -10 ? ? ? A . n A 1 15 PHE 15 -9 ? ? ? A . n A 1 16 ALA 16 -8 ? ? ? A . n A 1 17 ASP 17 -7 ? ? ? A . n A 1 18 TYR 18 -6 ? ? ? A . n A 1 19 LYS 19 -5 ? ? ? A . n A 1 20 ASP 20 -4 ? ? ? A . n A 1 21 ASP 21 -3 ? ? ? A . n A 1 22 ASP 22 -2 ? ? ? A . n A 1 23 ASP 23 -1 ? ? ? A . n A 1 24 ALA 24 0 ? ? ? A . n A 1 25 MET 25 1 ? ? ? A . n A 1 26 VAL 26 2 ? ? ? A . n A 1 27 PHE 27 3 ? ? ? A . n A 1 28 LEU 28 4 ? ? ? A . n A 1 29 SER 29 5 ? ? ? A . n A 1 30 GLY 30 6 ? ? ? A . n A 1 31 GLN 31 7 ? ? ? A . n A 1 32 ALA 32 8 ? ? ? A . n A 1 33 SER 33 9 ? ? ? A . n A 1 34 ASP 34 10 ? ? ? A . n A 1 35 SER 35 11 ? ? ? A . n A 1 36 SER 36 12 ? ? ? A . n A 1 37 GLN 37 13 ? ? ? A . n A 1 38 CYS 38 14 ? ? ? A . n A 1 39 THR 39 15 ? ? ? A . n A 1 40 GLN 40 16 ? ? ? A . n A 1 41 PRO 41 17 ? ? ? A . n A 1 42 PRO 42 18 ? ? ? A . n A 1 43 ALA 43 19 ? ? ? A . n A 1 44 PRO 44 20 ? ? ? A . n A 1 45 VAL 45 21 ? ? ? A . n A 1 46 GLN 46 22 ? ? ? A . n A 1 47 ILE 47 23 ? ? ? A . n A 1 48 SER 48 24 24 SER SER A . n A 1 49 LYS 49 25 25 LYS LYS A . n A 1 50 ALA 50 26 26 ALA ALA A . n A 1 51 ILE 51 27 27 ILE ILE A . n A 1 52 LEU 52 28 28 LEU LEU A . n A 1 53 LEU 53 29 29 LEU LEU A . n A 1 54 GLY 54 30 30 GLY GLY A . n A 1 55 VAL 55 31 31 VAL VAL A . n A 1 56 ILE 56 32 32 ILE ILE A . n A 1 57 LEU 57 33 33 LEU LEU A . n A 1 58 GLY 58 34 34 GLY GLY A . n A 1 59 GLY 59 35 35 GLY GLY A . n A 1 60 LEU 60 36 36 LEU LEU A . n A 1 61 ILE 61 37 37 ILE ILE A . n A 1 62 LEU 62 38 38 LEU LEU A . n A 1 63 PHE 63 39 39 PHE PHE A . n A 1 64 GLY 64 40 40 GLY GLY A . n A 1 65 VAL 65 41 41 VAL VAL A . n A 1 66 LEU 66 42 42 LEU LEU A . n A 1 67 GLY 67 43 43 GLY GLY A . n A 1 68 ASN 68 44 44 ASN ASN A . n A 1 69 ILE 69 45 45 ILE ILE A . n A 1 70 LEU 70 46 46 LEU LEU A . n A 1 71 VAL 71 47 47 VAL VAL A . n A 1 72 ILE 72 48 48 ILE ILE A . n A 1 73 LEU 73 49 49 LEU LEU A . n A 1 74 SER 74 50 50 SER SER A . n A 1 75 VAL 75 51 51 VAL VAL A . n A 1 76 ALA 76 52 52 ALA ALA A . n A 1 77 CYS 77 53 53 CYS CYS A . n A 1 78 HIS 78 54 54 HIS HIS A . n A 1 79 ARG 79 55 55 ARG ARG A . n A 1 80 HIS 80 56 56 HIS HIS A . n A 1 81 LEU 81 57 57 LEU LEU A . n A 1 82 HIS 82 58 58 HIS HIS A . n A 1 83 SER 83 59 59 SER SER A . n A 1 84 VAL 84 60 60 VAL VAL A . n A 1 85 THR 85 61 61 THR THR A . n A 1 86 HIS 86 62 62 HIS HIS A . n A 1 87 TYR 87 63 63 TYR TYR A . n A 1 88 TYR 88 64 64 TYR TYR A . n A 1 89 ILE 89 65 65 ILE ILE A . n A 1 90 VAL 90 66 66 VAL VAL A . n A 1 91 ASN 91 67 67 ASN ASN A . n A 1 92 LEU 92 68 68 LEU LEU A . n A 1 93 ALA 93 69 69 ALA ALA A . n A 1 94 VAL 94 70 70 VAL VAL A . n A 1 95 ALA 95 71 71 ALA ALA A . n A 1 96 ASP 96 72 72 ASP ASP A . n A 1 97 LEU 97 73 73 LEU LEU A . n A 1 98 LEU 98 74 74 LEU LEU A . n A 1 99 LEU 99 75 75 LEU LEU A . n A 1 100 THR 100 76 76 THR THR A . n A 1 101 SER 101 77 77 SER SER A . n A 1 102 THR 102 78 78 THR THR A . n A 1 103 VAL 103 79 79 VAL VAL A . n A 1 104 LEU 104 80 80 LEU LEU A . n A 1 105 PRO 105 81 81 PRO PRO A . n A 1 106 PHE 106 82 82 PHE PHE A . n A 1 107 SER 107 83 83 SER SER A . n A 1 108 ALA 108 84 84 ALA ALA A . n A 1 109 ILE 109 85 85 ILE ILE A . n A 1 110 PHE 110 86 86 PHE PHE A . n A 1 111 GLU 111 87 87 GLU GLU A . n A 1 112 VAL 112 88 88 VAL VAL A . n A 1 113 LEU 113 89 89 LEU LEU A . n A 1 114 GLY 114 90 90 GLY GLY A . n A 1 115 TYR 115 91 91 TYR TYR A . n A 1 116 TRP 116 92 92 TRP TRP A . n A 1 117 ALA 117 93 93 ALA ALA A . n A 1 118 PHE 118 94 94 PHE PHE A . n A 1 119 GLY 119 95 95 GLY GLY A . n A 1 120 ARG 120 96 96 ARG ARG A . n A 1 121 VAL 121 97 97 VAL VAL A . n A 1 122 PHE 122 98 98 PHE PHE A . n A 1 123 CYS 123 99 99 CYS CYS A . n A 1 124 ASN 124 100 100 ASN ASN A . n A 1 125 ILE 125 101 101 ILE ILE A . n A 1 126 TRP 126 102 102 TRP TRP A . n A 1 127 ALA 127 103 103 ALA ALA A . n A 1 128 ALA 128 104 104 ALA ALA A . n A 1 129 VAL 129 105 105 VAL VAL A . n A 1 130 ASP 130 106 106 ASP ASP A . n A 1 131 VAL 131 107 107 VAL VAL A . n A 1 132 LEU 132 108 108 LEU LEU A . n A 1 133 CYS 133 109 109 CYS CYS A . n A 1 134 CYS 134 110 110 CYS CYS A . n A 1 135 THR 135 111 111 THR THR A . n A 1 136 ALA 136 112 112 ALA ALA A . n A 1 137 ARG 137 113 113 ARG ARG A . n A 1 138 ILE 138 114 114 ILE ILE A . n A 1 139 TRP 139 115 115 TRP TRP A . n A 1 140 GLY 140 116 116 GLY GLY A . n A 1 141 LEU 141 117 117 LEU LEU A . n A 1 142 CYS 142 118 118 CYS CYS A . n A 1 143 ILE 143 119 119 ILE ILE A . n A 1 144 ILE 144 120 120 ILE ILE A . n A 1 145 SER 145 121 121 SER SER A . n A 1 146 ILE 146 122 122 ILE ILE A . n A 1 147 ASP 147 123 123 ASP ASP A . n A 1 148 ARG 148 124 124 ARG ARG A . n A 1 149 TYR 149 125 125 TYR TYR A . n A 1 150 ILE 150 126 126 ILE ILE A . n A 1 151 GLY 151 127 127 GLY GLY A . n A 1 152 VAL 152 128 128 VAL VAL A . n A 1 153 SER 153 129 129 SER SER A . n A 1 154 TYR 154 130 130 TYR TYR A . n A 1 155 PRO 155 131 131 PRO PRO A . n A 1 156 LEU 156 132 132 LEU LEU A . n A 1 157 ARG 157 133 133 ARG ARG A . n A 1 158 TYR 158 134 134 TYR TYR A . n A 1 159 PRO 159 135 135 PRO PRO A . n A 1 160 THR 160 136 136 THR THR A . n A 1 161 ILE 161 137 137 ILE ILE A . n A 1 162 VAL 162 138 138 VAL VAL A . n A 1 163 THR 163 139 139 THR THR A . n A 1 164 GLN 164 140 140 GLN GLN A . n A 1 165 ARG 165 141 141 ARG ARG A . n A 1 166 ARG 166 142 142 ARG ARG A . n A 1 167 GLY 167 143 143 GLY GLY A . n A 1 168 LEU 168 144 144 LEU LEU A . n A 1 169 MET 169 145 145 MET MET A . n A 1 170 ALA 170 146 146 ALA ALA A . n A 1 171 LEU 171 147 147 LEU LEU A . n A 1 172 LEU 172 148 148 LEU LEU A . n A 1 173 CYS 173 149 149 CYS CYS A . n A 1 174 VAL 174 150 150 VAL VAL A . n A 1 175 TRP 175 151 151 TRP TRP A . n A 1 176 ALA 176 152 152 ALA ALA A . n A 1 177 LEU 177 153 153 LEU LEU A . n A 1 178 SER 178 154 154 SER SER A . n A 1 179 LEU 179 155 155 LEU LEU A . n A 1 180 VAL 180 156 156 VAL VAL A . n A 1 181 ILE 181 157 157 ILE ILE A . n A 1 182 SER 182 158 158 SER SER A . n A 1 183 ILE 183 159 159 ILE ILE A . n A 1 184 GLY 184 160 160 GLY GLY A . n A 1 185 PRO 185 161 161 PRO PRO A . n A 1 186 LEU 186 162 162 LEU LEU A . n A 1 187 PHE 187 163 163 PHE PHE A . n A 1 188 GLY 188 164 164 GLY GLY A . n A 1 189 TRP 189 165 165 TRP TRP A . n A 1 190 ARG 190 166 166 ARG ARG A . n A 1 191 GLN 191 167 167 GLN GLN A . n A 1 192 PRO 192 168 168 PRO PRO A . n A 1 193 ALA 193 169 169 ALA ALA A . n A 1 194 PRO 194 170 170 PRO PRO A . n A 1 195 GLU 195 171 171 GLU GLU A . n A 1 196 ASP 196 172 172 ASP ASP A . n A 1 197 GLU 197 173 173 GLU GLU A . n A 1 198 THR 198 174 174 THR THR A . n A 1 199 ILE 199 175 175 ILE ILE A . n A 1 200 CYS 200 176 176 CYS CYS A . n A 1 201 GLN 201 177 177 GLN GLN A . n A 1 202 ILE 202 178 178 ILE ILE A . n A 1 203 ASN 203 179 179 ASN ASN A . n A 1 204 GLU 204 180 180 GLU GLU A . n A 1 205 GLU 205 181 181 GLU GLU A . n A 1 206 PRO 206 182 182 PRO PRO A . n A 1 207 GLY 207 183 183 GLY GLY A . n A 1 208 TYR 208 184 184 TYR TYR A . n A 1 209 VAL 209 185 185 VAL VAL A . n A 1 210 LEU 210 186 186 LEU LEU A . n A 1 211 PHE 211 187 187 PHE PHE A . n A 1 212 SER 212 188 188 SER SER A . n A 1 213 ALA 213 189 189 ALA ALA A . n A 1 214 LEU 214 190 190 LEU LEU A . n A 1 215 GLY 215 191 191 GLY GLY A . n A 1 216 SER 216 192 192 SER SER A . n A 1 217 PHE 217 193 193 PHE PHE A . n A 1 218 TYR 218 194 194 TYR TYR A . n A 1 219 LEU 219 195 195 LEU LEU A . n A 1 220 PRO 220 196 196 PRO PRO A . n A 1 221 LEU 221 197 197 LEU LEU A . n A 1 222 ALA 222 198 198 ALA ALA A . n A 1 223 ILE 223 199 199 ILE ILE A . n A 1 224 ILE 224 200 200 ILE ILE A . n A 1 225 LEU 225 201 201 LEU LEU A . n A 1 226 VAL 226 202 202 VAL VAL A . n A 1 227 MET 227 203 203 MET MET A . n A 1 228 TYR 228 204 204 TYR TYR A . n A 1 229 THR 229 205 205 THR THR A . n A 1 230 LEU 230 206 206 LEU LEU A . n A 1 231 MET 231 207 207 MET MET A . n A 1 232 ILE 232 208 208 ILE ILE A . n A 1 233 LEU 233 209 209 LEU LEU A . n A 1 234 ARG 234 210 210 ARG ARG A . n A 1 235 LEU 235 211 211 LEU LEU A . n A 1 236 LYS 236 212 212 LYS LYS A . n A 1 237 SER 237 213 213 SER SER A . n A 1 238 VAL 238 214 214 VAL VAL A . n A 1 239 ARG 239 215 215 ARG ARG A . n A 1 240 LEU 240 216 216 LEU LEU A . n A 1 241 LEU 241 217 217 LEU LEU A . n A 1 242 SER 242 218 218 SER SER A . n A 1 243 GLY 243 219 219 GLY GLY A . n A 1 244 SER 244 220 220 SER SER A . n A 1 245 ARG 245 221 221 ARG ARG A . n A 1 246 GLU 246 222 222 GLU GLU A . n A 1 247 LYS 247 223 223 LYS LYS A . n A 1 248 ASP 248 224 224 ASP ASP A . n A 1 249 ARG 249 225 225 ARG ARG A . n A 1 250 ASN 250 226 226 ASN ASN A . n A 1 251 LEU 251 227 227 LEU LEU A . n A 1 252 ARG 252 228 228 ARG ARG A . n A 1 253 ARG 253 229 229 ARG ARG A . n A 1 254 ILE 254 230 230 ILE ILE A . n A 1 255 THR 255 231 231 THR THR A . n A 1 256 ARG 256 232 232 ARG ARG A . n A 1 257 LEU 257 233 233 LEU LEU A . n A 1 258 VAL 258 234 234 VAL VAL A . n A 1 259 LEU 259 235 235 LEU LEU A . n A 1 260 ILE 260 276 276 ILE ILE A . n A 1 261 VAL 261 277 277 VAL VAL A . n A 1 262 VAL 262 278 278 VAL VAL A . n A 1 263 GLY 263 279 279 GLY GLY A . n A 1 264 CYS 264 280 280 CYS CYS A . n A 1 265 PHE 265 281 281 PHE PHE A . n A 1 266 VAL 266 282 282 VAL VAL A . n A 1 267 LEU 267 283 283 LEU LEU A . n A 1 268 CYS 268 284 284 CYS CYS A . n A 1 269 TRP 269 285 285 TRP TRP A . n A 1 270 LEU 270 286 286 LEU LEU A . n A 1 271 PRO 271 287 287 PRO PRO A . n A 1 272 PHE 272 288 288 PHE PHE A . n A 1 273 PHE 273 289 289 PHE PHE A . n A 1 274 LEU 274 290 290 LEU LEU A . n A 1 275 VAL 275 291 291 VAL VAL A . n A 1 276 MET 276 292 292 MET MET A . n A 1 277 PRO 277 293 293 PRO PRO A . n A 1 278 ILE 278 294 294 ILE ILE A . n A 1 279 GLY 279 295 295 GLY GLY A . n A 1 280 SER 280 296 296 SER SER A . n A 1 281 PHE 281 297 297 PHE PHE A . n A 1 282 PHE 282 298 298 PHE PHE A . n A 1 283 PRO 283 299 299 PRO PRO A . n A 1 284 ASP 284 300 300 ASP ASP A . n A 1 285 PHE 285 301 301 PHE PHE A . n A 1 286 LYS 286 302 302 LYS LYS A . n A 1 287 PRO 287 303 303 PRO PRO A . n A 1 288 SER 288 304 304 SER SER A . n A 1 289 GLU 289 305 305 GLU GLU A . n A 1 290 THR 290 306 306 THR THR A . n A 1 291 VAL 291 307 307 VAL VAL A . n A 1 292 PHE 292 308 308 PHE PHE A . n A 1 293 LYS 293 309 309 LYS LYS A . n A 1 294 ILE 294 310 310 ILE ILE A . n A 1 295 VAL 295 311 311 VAL VAL A . n A 1 296 PHE 296 312 312 PHE PHE A . n A 1 297 TRP 297 313 313 TRP TRP A . n A 1 298 LEU 298 314 314 LEU LEU A . n A 1 299 GLY 299 315 315 GLY GLY A . n A 1 300 TYR 300 316 316 TYR TYR A . n A 1 301 LEU 301 317 317 LEU LEU A . n A 1 302 ASN 302 318 318 ASN ASN A . n A 1 303 SER 303 319 319 SER SER A . n A 1 304 CYS 304 320 320 CYS CYS A . n A 1 305 ILE 305 321 321 ILE ILE A . n A 1 306 ASN 306 322 322 ASN ASN A . n A 1 307 PRO 307 323 323 PRO PRO A . n A 1 308 ILE 308 324 324 ILE ILE A . n A 1 309 ILE 309 325 325 ILE ILE A . n A 1 310 TYR 310 326 326 TYR TYR A . n A 1 311 PRO 311 327 327 PRO PRO A . n A 1 312 CYS 312 328 328 CYS CYS A . n A 1 313 SER 313 329 329 SER SER A . n A 1 314 SER 314 330 330 SER SER A . n A 1 315 GLN 315 331 331 GLN GLN A . n A 1 316 GLU 316 332 332 GLU GLU A . n A 1 317 PHE 317 333 333 PHE PHE A . n A 1 318 LYS 318 334 334 LYS LYS A . n A 1 319 LYS 319 335 335 LYS LYS A . n A 1 320 ALA 320 336 336 ALA ALA A . n A 1 321 PHE 321 337 337 PHE PHE A . n A 1 322 GLN 322 338 338 GLN GLN A . n A 1 323 ASN 323 339 339 ASN ASN A . n A 1 324 VAL 324 340 340 VAL VAL A . n A 1 325 LEU 325 341 341 LEU LEU A . n A 1 326 ARG 326 342 342 ARG ARG A . n A 1 327 ILE 327 343 343 ILE ILE A . n A 1 328 GLN 328 344 ? ? ? A . n A 1 329 CYS 329 345 ? ? ? A . n A 1 330 LEU 330 346 ? ? ? A . n A 1 331 CYS 331 347 ? ? ? A . n A 1 332 ARG 332 348 ? ? ? A . n A 1 333 LYS 333 349 ? ? ? A . n A 1 334 GLN 334 350 ? ? ? A . n A 1 335 SER 335 351 ? ? ? A . n A 1 336 SER 336 352 ? ? ? A . n A 1 337 LYS 337 353 ? ? ? A . n A 1 338 HIS 338 354 ? ? ? A . n A 1 339 ALA 339 355 ? ? ? A . n A 1 340 LEU 340 356 ? ? ? A . n A 1 341 GLY 341 357 ? ? ? A . n A 1 342 TYR 342 358 ? ? ? A . n A 1 343 THR 343 359 ? ? ? A . n A 1 344 LEU 344 360 ? ? ? A . n A 1 345 HIS 345 361 ? ? ? A . n A 1 346 PRO 346 362 ? ? ? A . n A 1 347 PRO 347 363 ? ? ? A . n A 1 348 SER 348 364 ? ? ? A . n A 1 349 GLN 349 365 ? ? ? A . n A 1 350 ALA 350 366 ? ? ? A . n A 1 351 VAL 351 367 ? ? ? A . n A 1 352 GLU 352 368 ? ? ? A . n A 1 353 GLY 353 369 ? ? ? A . n A 1 354 GLN 354 370 ? ? ? A . n A 1 355 HIS 355 371 ? ? ? A . n A 1 356 HIS 356 372 ? ? ? A . n A 1 357 HIS 357 373 ? ? ? A . n A 1 358 HIS 358 374 ? ? ? A . n A 1 359 HIS 359 375 ? ? ? A . n A 1 360 HIS 360 376 ? ? ? A . n A 1 361 HIS 361 377 ? ? ? A . n A 1 362 HIS 362 378 ? ? ? A . n B 2 1 MET 1 -21 ? ? ? D . n B 2 2 LYS 2 -20 ? ? ? D . n B 2 3 TYR 3 -19 ? ? ? D . n B 2 4 LEU 4 -18 ? ? ? D . n B 2 5 LEU 5 -17 ? ? ? D . n B 2 6 PRO 6 -16 ? ? ? D . n B 2 7 THR 7 -15 ? ? ? D . n B 2 8 ALA 8 -14 ? ? ? D . n B 2 9 ALA 9 -13 ? ? ? D . n B 2 10 ALA 10 -12 ? ? ? D . n B 2 11 GLY 11 -11 ? ? ? D . n B 2 12 LEU 12 -10 ? ? ? D . n B 2 13 LEU 13 -9 ? ? ? D . n B 2 14 LEU 14 -8 ? ? ? D . n B 2 15 LEU 15 -7 ? ? ? D . n B 2 16 ALA 16 -6 ? ? ? D . n B 2 17 ALA 17 -5 ? ? ? D . n B 2 18 GLN 18 -4 ? ? ? D . n B 2 19 PRO 19 -3 ? ? ? D . n B 2 20 ALA 20 -2 ? ? ? D . n B 2 21 MET 21 -1 ? ? ? D . n B 2 22 ALA 22 0 ? ? ? D . n B 2 23 MET 23 1 ? ? ? D . n B 2 24 ALA 24 2 ? ? ? D . n B 2 25 GLN 25 3 3 GLN GLN D . n B 2 26 VAL 26 4 4 VAL VAL D . n B 2 27 GLN 27 5 5 GLN GLN D . n B 2 28 LEU 28 6 6 LEU LEU D . n B 2 29 GLN 29 7 7 GLN GLN D . n B 2 30 GLU 30 8 8 GLU GLU D . n B 2 31 SER 31 9 9 SER SER D . n B 2 32 GLY 32 10 10 GLY GLY D . n B 2 33 GLY 33 11 11 GLY GLY D . n B 2 34 GLY 34 12 12 GLY GLY D . n B 2 35 LEU 35 13 13 LEU LEU D . n B 2 36 VAL 36 14 14 VAL VAL D . n B 2 37 GLN 37 15 15 GLN GLN D . n B 2 38 ALA 38 16 16 ALA ALA D . n B 2 39 GLY 39 17 17 GLY GLY D . n B 2 40 GLU 40 18 18 GLU GLU D . n B 2 41 SER 41 19 19 SER SER D . n B 2 42 LEU 42 20 20 LEU LEU D . n B 2 43 ARG 43 21 21 ARG ARG D . n B 2 44 LEU 44 22 22 LEU LEU D . n B 2 45 SER 45 23 23 SER SER D . n B 2 46 CYS 46 24 24 CYS CYS D . n B 2 47 ALA 47 25 25 ALA ALA D . n B 2 48 ALA 48 26 26 ALA ALA D . n B 2 49 SER 49 27 27 SER SER D . n B 2 50 GLY 50 28 28 GLY GLY D . n B 2 51 THR 51 29 29 THR THR D . n B 2 52 ILE 52 30 30 ILE ILE D . n B 2 53 PHE 53 31 31 PHE PHE D . n B 2 54 ARG 54 32 32 ARG ARG D . n B 2 55 LEU 55 33 33 LEU LEU D . n B 2 56 TYR 56 34 34 TYR TYR D . n B 2 57 ASP 57 35 35 ASP ASP D . n B 2 58 MET 58 36 36 MET MET D . n B 2 59 GLY 59 37 37 GLY GLY D . n B 2 60 TRP 60 38 38 TRP TRP D . n B 2 61 TYR 61 39 39 TYR TYR D . n B 2 62 ARG 62 40 40 ARG ARG D . n B 2 63 ARG 63 41 41 ARG ARG D . n B 2 64 VAL 64 42 ? ? ? D . n B 2 65 SER 65 43 ? ? ? D . n B 2 66 GLY 66 44 ? ? ? D . n B 2 67 ASN 67 45 ? ? ? D . n B 2 68 GLN 68 46 46 GLN GLN D . n B 2 69 ARG 69 47 47 ARG ARG D . n B 2 70 GLU 70 48 48 GLU GLU D . n B 2 71 LEU 71 49 49 LEU LEU D . n B 2 72 VAL 72 50 50 VAL VAL D . n B 2 73 ALA 73 51 51 ALA ALA D . n B 2 74 SER 74 52 52 SER SER D . n B 2 75 ILE 75 53 53 ILE ILE D . n B 2 76 THR 76 54 54 THR THR D . n B 2 77 SER 77 55 55 SER SER D . n B 2 78 GLY 78 56 56 GLY GLY D . n B 2 79 GLY 79 57 57 GLY GLY D . n B 2 80 SER 80 58 58 SER SER D . n B 2 81 THR 81 59 59 THR THR D . n B 2 82 LYS 82 60 60 LYS LYS D . n B 2 83 TYR 83 61 61 TYR TYR D . n B 2 84 GLY 84 62 62 GLY GLY D . n B 2 85 ASP 85 63 63 ASP ASP D . n B 2 86 SER 86 64 64 SER SER D . n B 2 87 VAL 87 65 65 VAL VAL D . n B 2 88 LYS 88 66 66 LYS LYS D . n B 2 89 GLY 89 67 67 GLY GLY D . n B 2 90 ARG 90 68 68 ARG ARG D . n B 2 91 PHE 91 69 69 PHE PHE D . n B 2 92 THR 92 70 70 THR THR D . n B 2 93 ILE 93 71 71 ILE ILE D . n B 2 94 SER 94 72 72 SER SER D . n B 2 95 ARG 95 73 73 ARG ARG D . n B 2 96 ASP 96 74 74 ASP ASP D . n B 2 97 ASN 97 75 75 ASN ASN D . n B 2 98 ALA 98 76 76 ALA ALA D . n B 2 99 LYS 99 77 77 LYS LYS D . n B 2 100 ASN 100 78 78 ASN ASN D . n B 2 101 THR 101 79 79 THR THR D . n B 2 102 VAL 102 80 80 VAL VAL D . n B 2 103 TYR 103 81 81 TYR TYR D . n B 2 104 LEU 104 82 82 LEU LEU D . n B 2 105 GLN 105 83 83 GLN GLN D . n B 2 106 MET 106 84 84 MET MET D . n B 2 107 SER 107 85 85 SER SER D . n B 2 108 SER 108 86 86 SER SER D . n B 2 109 LEU 109 87 87 LEU LEU D . n B 2 110 LYS 110 88 88 LYS LYS D . n B 2 111 PRO 111 89 89 PRO PRO D . n B 2 112 GLU 112 90 90 GLU GLU D . n B 2 113 ASP 113 91 91 ASP ASP D . n B 2 114 THR 114 92 92 THR THR D . n B 2 115 ALA 115 93 93 ALA ALA D . n B 2 116 VAL 116 94 94 VAL VAL D . n B 2 117 TYR 117 95 95 TYR TYR D . n B 2 118 TYR 118 96 96 TYR TYR D . n B 2 119 CYS 119 97 97 CYS CYS D . n B 2 120 ASN 120 98 98 ASN ASN D . n B 2 121 ALA 121 99 99 ALA ALA D . n B 2 122 GLU 122 100 100 GLU GLU D . n B 2 123 TYR 123 101 101 TYR TYR D . n B 2 124 ARG 124 102 102 ARG ARG D . n B 2 125 THR 125 103 103 THR THR D . n B 2 126 GLY 126 104 104 GLY GLY D . n B 2 127 ILE 127 105 105 ILE ILE D . n B 2 128 TRP 128 106 106 TRP TRP D . n B 2 129 GLU 129 107 107 GLU GLU D . n B 2 130 GLU 130 108 108 GLU GLU D . n B 2 131 LEU 131 109 109 LEU LEU D . n B 2 132 LEU 132 110 110 LEU LEU D . n B 2 133 ASP 133 111 111 ASP ASP D . n B 2 134 GLY 134 112 112 GLY GLY D . n B 2 135 TRP 135 113 113 TRP TRP D . n B 2 136 GLY 136 114 114 GLY GLY D . n B 2 137 GLN 137 115 115 GLN GLN D . n B 2 138 GLY 138 116 116 GLY GLY D . n B 2 139 THR 139 117 117 THR THR D . n B 2 140 GLN 140 118 118 GLN GLN D . n B 2 141 VAL 141 119 119 VAL VAL D . n B 2 142 THR 142 120 120 THR THR D . n B 2 143 VAL 143 121 121 VAL VAL D . n B 2 144 SER 144 122 122 SER SER D . n B 2 145 SER 145 123 ? ? ? D . n B 2 146 HIS 146 124 ? ? ? D . n B 2 147 HIS 147 125 ? ? ? D . n B 2 148 HIS 148 126 ? ? ? D . n B 2 149 HIS 149 127 ? ? ? D . n B 2 150 HIS 150 128 ? ? ? D . n B 2 151 HIS 151 129 ? ? ? D . n # _pdbx_contact_author.id 3 _pdbx_contact_author.email liu_xy@mail.tsinghua.edu.cn _pdbx_contact_author.name_first Xiangyu _pdbx_contact_author.name_last Liu _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-3178-9238 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id JGX _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 441 _pdbx_nonpoly_scheme.pdb_mon_id JGX _pdbx_nonpoly_scheme.auth_mon_id TAM _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2023-07-05 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version 1.14_3247: _software.pdbx_ordinal 1 # _pdbx_entry_details.entry_id 7YMJ _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _em_3d_fitting.entry_id 7YMJ _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol ? _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 7YMJ _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 285000 _em_3d_reconstruction.resolution 3.35 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7.5 _em_buffer.specimen_id 1 _em_buffer.name ? # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.details _em_entity_assembly.name _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.entity_id_list _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details 1 0 ? 'alpha1AAR-Nb6 complex' RECOMBINANT COMPLEX '1, 2' ? ? 2 1 ? alpha1AAR RECOMBINANT COMPLEX 1 ? ? 3 1 ? Nb6 RECOMBINANT COMPLEX 2 ? ? # _em_imaging.id 1 _em_imaging.entry_id 7YMJ _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max 1800 _em_imaging.nominal_defocus_min 1300 _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.entry_id 7YMJ _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7YMJ _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TRP A 165 ? ? -104.60 40.49 2 1 GLU A 173 ? ? 57.53 10.21 3 1 PHE A 301 ? ? -97.59 32.41 4 1 LYS D 66 ? ? -90.94 51.73 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 25 ? CG ? A LYS 49 CG 2 1 Y 1 A LYS 25 ? CD ? A LYS 49 CD 3 1 Y 1 A LYS 25 ? CE ? A LYS 49 CE 4 1 Y 1 A LYS 25 ? NZ ? A LYS 49 NZ 5 1 Y 1 A ILE 27 ? CG1 ? A ILE 51 CG1 6 1 Y 1 A ILE 27 ? CG2 ? A ILE 51 CG2 7 1 Y 1 A ILE 27 ? CD1 ? A ILE 51 CD1 8 1 Y 1 A PHE 301 ? CG ? A PHE 285 CG 9 1 Y 1 A PHE 301 ? CD1 ? A PHE 285 CD1 10 1 Y 1 A PHE 301 ? CD2 ? A PHE 285 CD2 11 1 Y 1 A PHE 301 ? CE1 ? A PHE 285 CE1 12 1 Y 1 A PHE 301 ? CE2 ? A PHE 285 CE2 13 1 Y 1 A PHE 301 ? CZ ? A PHE 285 CZ 14 1 Y 1 D GLN 3 ? CG ? B GLN 25 CG 15 1 Y 1 D GLN 3 ? CD ? B GLN 25 CD 16 1 Y 1 D GLN 3 ? OE1 ? B GLN 25 OE1 17 1 Y 1 D GLN 3 ? NE2 ? B GLN 25 NE2 18 1 Y 1 D GLN 5 ? CG ? B GLN 27 CG 19 1 Y 1 D GLN 5 ? CD ? B GLN 27 CD 20 1 Y 1 D GLN 5 ? OE1 ? B GLN 27 OE1 21 1 Y 1 D GLN 5 ? NE2 ? B GLN 27 NE2 22 1 Y 1 D GLN 7 ? CG ? B GLN 29 CG 23 1 Y 1 D GLN 7 ? CD ? B GLN 29 CD 24 1 Y 1 D GLN 7 ? OE1 ? B GLN 29 OE1 25 1 Y 1 D GLN 7 ? NE2 ? B GLN 29 NE2 26 1 Y 1 D LEU 13 ? CG ? B LEU 35 CG 27 1 Y 1 D LEU 13 ? CD1 ? B LEU 35 CD1 28 1 Y 1 D LEU 13 ? CD2 ? B LEU 35 CD2 29 1 Y 1 D VAL 14 ? CG1 ? B VAL 36 CG1 30 1 Y 1 D VAL 14 ? CG2 ? B VAL 36 CG2 31 1 Y 1 D GLU 18 ? CG ? B GLU 40 CG 32 1 Y 1 D GLU 18 ? CD ? B GLU 40 CD 33 1 Y 1 D GLU 18 ? OE1 ? B GLU 40 OE1 34 1 Y 1 D GLU 18 ? OE2 ? B GLU 40 OE2 35 1 Y 1 D SER 27 ? OG ? B SER 49 OG 36 1 Y 1 D THR 29 ? OG1 ? B THR 51 OG1 37 1 Y 1 D THR 29 ? CG2 ? B THR 51 CG2 38 1 Y 1 D ARG 47 ? CG ? B ARG 69 CG 39 1 Y 1 D ARG 47 ? CD ? B ARG 69 CD 40 1 Y 1 D ARG 47 ? NE ? B ARG 69 NE 41 1 Y 1 D ARG 47 ? CZ ? B ARG 69 CZ 42 1 Y 1 D ARG 47 ? NH1 ? B ARG 69 NH1 43 1 Y 1 D ARG 47 ? NH2 ? B ARG 69 NH2 44 1 Y 1 D LYS 60 ? CG ? B LYS 82 CG 45 1 Y 1 D LYS 60 ? CD ? B LYS 82 CD 46 1 Y 1 D LYS 60 ? CE ? B LYS 82 CE 47 1 Y 1 D LYS 60 ? NZ ? B LYS 82 NZ 48 1 Y 1 D ASP 63 ? CG ? B ASP 85 CG 49 1 Y 1 D ASP 63 ? OD1 ? B ASP 85 OD1 50 1 Y 1 D ASP 63 ? OD2 ? B ASP 85 OD2 51 1 Y 1 D LYS 66 ? CG ? B LYS 88 CG 52 1 Y 1 D LYS 66 ? CD ? B LYS 88 CD 53 1 Y 1 D LYS 66 ? CE ? B LYS 88 CE 54 1 Y 1 D LYS 66 ? NZ ? B LYS 88 NZ 55 1 Y 1 D LYS 77 ? CG ? B LYS 99 CG 56 1 Y 1 D LYS 77 ? CD ? B LYS 99 CD 57 1 Y 1 D LYS 77 ? CE ? B LYS 99 CE 58 1 Y 1 D LYS 77 ? NZ ? B LYS 99 NZ 59 1 Y 1 D LYS 88 ? CG ? B LYS 110 CG 60 1 Y 1 D LYS 88 ? CD ? B LYS 110 CD 61 1 Y 1 D LYS 88 ? CE ? B LYS 110 CE 62 1 Y 1 D LYS 88 ? NZ ? B LYS 110 NZ 63 1 Y 1 D GLU 90 ? CG ? B GLU 112 CG 64 1 Y 1 D GLU 90 ? CD ? B GLU 112 CD 65 1 Y 1 D GLU 90 ? OE1 ? B GLU 112 OE1 66 1 Y 1 D GLU 90 ? OE2 ? B GLU 112 OE2 67 1 Y 1 D GLN 115 ? CG ? B GLN 137 CG 68 1 Y 1 D GLN 115 ? CD ? B GLN 137 CD 69 1 Y 1 D GLN 115 ? OE1 ? B GLN 137 OE1 70 1 Y 1 D GLN 115 ? NE2 ? B GLN 137 NE2 71 1 Y 1 D SER 122 ? OG ? B SER 144 OG # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -23 ? A MET 1 2 1 Y 1 A LYS -22 ? A LYS 2 3 1 Y 1 A THR -21 ? A THR 3 4 1 Y 1 A ILE -20 ? A ILE 4 5 1 Y 1 A ILE -19 ? A ILE 5 6 1 Y 1 A ALA -18 ? A ALA 6 7 1 Y 1 A LEU -17 ? A LEU 7 8 1 Y 1 A SER -16 ? A SER 8 9 1 Y 1 A TYR -15 ? A TYR 9 10 1 Y 1 A ILE -14 ? A ILE 10 11 1 Y 1 A PHE -13 ? A PHE 11 12 1 Y 1 A CYS -12 ? A CYS 12 13 1 Y 1 A LEU -11 ? A LEU 13 14 1 Y 1 A VAL -10 ? A VAL 14 15 1 Y 1 A PHE -9 ? A PHE 15 16 1 Y 1 A ALA -8 ? A ALA 16 17 1 Y 1 A ASP -7 ? A ASP 17 18 1 Y 1 A TYR -6 ? A TYR 18 19 1 Y 1 A LYS -5 ? A LYS 19 20 1 Y 1 A ASP -4 ? A ASP 20 21 1 Y 1 A ASP -3 ? A ASP 21 22 1 Y 1 A ASP -2 ? A ASP 22 23 1 Y 1 A ASP -1 ? A ASP 23 24 1 Y 1 A ALA 0 ? A ALA 24 25 1 Y 1 A MET 1 ? A MET 25 26 1 Y 1 A VAL 2 ? A VAL 26 27 1 Y 1 A PHE 3 ? A PHE 27 28 1 Y 1 A LEU 4 ? A LEU 28 29 1 Y 1 A SER 5 ? A SER 29 30 1 Y 1 A GLY 6 ? A GLY 30 31 1 Y 1 A GLN 7 ? A GLN 31 32 1 Y 1 A ALA 8 ? A ALA 32 33 1 Y 1 A SER 9 ? A SER 33 34 1 Y 1 A ASP 10 ? A ASP 34 35 1 Y 1 A SER 11 ? A SER 35 36 1 Y 1 A SER 12 ? A SER 36 37 1 Y 1 A GLN 13 ? A GLN 37 38 1 Y 1 A CYS 14 ? A CYS 38 39 1 Y 1 A THR 15 ? A THR 39 40 1 Y 1 A GLN 16 ? A GLN 40 41 1 Y 1 A PRO 17 ? A PRO 41 42 1 Y 1 A PRO 18 ? A PRO 42 43 1 Y 1 A ALA 19 ? A ALA 43 44 1 Y 1 A PRO 20 ? A PRO 44 45 1 Y 1 A VAL 21 ? A VAL 45 46 1 Y 1 A GLN 22 ? A GLN 46 47 1 Y 1 A ILE 23 ? A ILE 47 48 1 Y 1 A GLN 344 ? A GLN 328 49 1 Y 1 A CYS 345 ? A CYS 329 50 1 Y 1 A LEU 346 ? A LEU 330 51 1 Y 1 A CYS 347 ? A CYS 331 52 1 Y 1 A ARG 348 ? A ARG 332 53 1 Y 1 A LYS 349 ? A LYS 333 54 1 Y 1 A GLN 350 ? A GLN 334 55 1 Y 1 A SER 351 ? A SER 335 56 1 Y 1 A SER 352 ? A SER 336 57 1 Y 1 A LYS 353 ? A LYS 337 58 1 Y 1 A HIS 354 ? A HIS 338 59 1 Y 1 A ALA 355 ? A ALA 339 60 1 Y 1 A LEU 356 ? A LEU 340 61 1 Y 1 A GLY 357 ? A GLY 341 62 1 Y 1 A TYR 358 ? A TYR 342 63 1 Y 1 A THR 359 ? A THR 343 64 1 Y 1 A LEU 360 ? A LEU 344 65 1 Y 1 A HIS 361 ? A HIS 345 66 1 Y 1 A PRO 362 ? A PRO 346 67 1 Y 1 A PRO 363 ? A PRO 347 68 1 Y 1 A SER 364 ? A SER 348 69 1 Y 1 A GLN 365 ? A GLN 349 70 1 Y 1 A ALA 366 ? A ALA 350 71 1 Y 1 A VAL 367 ? A VAL 351 72 1 Y 1 A GLU 368 ? A GLU 352 73 1 Y 1 A GLY 369 ? A GLY 353 74 1 Y 1 A GLN 370 ? A GLN 354 75 1 Y 1 A HIS 371 ? A HIS 355 76 1 Y 1 A HIS 372 ? A HIS 356 77 1 Y 1 A HIS 373 ? A HIS 357 78 1 Y 1 A HIS 374 ? A HIS 358 79 1 Y 1 A HIS 375 ? A HIS 359 80 1 Y 1 A HIS 376 ? A HIS 360 81 1 Y 1 A HIS 377 ? A HIS 361 82 1 Y 1 A HIS 378 ? A HIS 362 83 1 Y 1 D MET -21 ? B MET 1 84 1 Y 1 D LYS -20 ? B LYS 2 85 1 Y 1 D TYR -19 ? B TYR 3 86 1 Y 1 D LEU -18 ? B LEU 4 87 1 Y 1 D LEU -17 ? B LEU 5 88 1 Y 1 D PRO -16 ? B PRO 6 89 1 Y 1 D THR -15 ? B THR 7 90 1 Y 1 D ALA -14 ? B ALA 8 91 1 Y 1 D ALA -13 ? B ALA 9 92 1 Y 1 D ALA -12 ? B ALA 10 93 1 Y 1 D GLY -11 ? B GLY 11 94 1 Y 1 D LEU -10 ? B LEU 12 95 1 Y 1 D LEU -9 ? B LEU 13 96 1 Y 1 D LEU -8 ? B LEU 14 97 1 Y 1 D LEU -7 ? B LEU 15 98 1 Y 1 D ALA -6 ? B ALA 16 99 1 Y 1 D ALA -5 ? B ALA 17 100 1 Y 1 D GLN -4 ? B GLN 18 101 1 Y 1 D PRO -3 ? B PRO 19 102 1 Y 1 D ALA -2 ? B ALA 20 103 1 Y 1 D MET -1 ? B MET 21 104 1 Y 1 D ALA 0 ? B ALA 22 105 1 Y 1 D MET 1 ? B MET 23 106 1 Y 1 D ALA 2 ? B ALA 24 107 1 Y 1 D VAL 42 ? B VAL 64 108 1 Y 1 D SER 43 ? B SER 65 109 1 Y 1 D GLY 44 ? B GLY 66 110 1 Y 1 D ASN 45 ? B ASN 67 111 1 Y 1 D SER 123 ? B SER 145 112 1 Y 1 D HIS 124 ? B HIS 146 113 1 Y 1 D HIS 125 ? B HIS 147 114 1 Y 1 D HIS 126 ? B HIS 148 115 1 Y 1 D HIS 127 ? B HIS 149 116 1 Y 1 D HIS 128 ? B HIS 150 117 1 Y 1 D HIS 129 ? B HIS 151 # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type NONE _em_ctf_correction.details ? # loop_ _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue 1 2 ? ? 9606 ? ? 'Homo sapiens' ? ? 2 3 ? ? 9844 ? ? 'Lama glama' ? ? # loop_ _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain 1 2 ? 7108 'Spodoptera frugiperda' ? ? 2 3 ? 562 'Escherichia coli' ? ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON IV (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? _em_image_recording.avg_electron_dose_per_subtomogram ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? ? ? 1 ? ? 2 'IMAGE ACQUISITION' ? ? ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? ? ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? ? ? ? ? ? 8 'MODEL REFINEMENT' ? ? ? ? ? ? 9 OTHER ? ? ? ? ? ? 10 'INITIAL EULER ASSIGNMENT' ? cryoSPARC ? 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? cryoSPARC ? 1 ? ? 12 CLASSIFICATION ? ? ? 1 ? ? 13 RECONSTRUCTION ? ? ? 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 32122041 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id JGX _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id JGX _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name Tamsulosin _pdbx_entity_nonpoly.comp_id JGX # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #