data_7JM3 # _entry.id 7JM3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7JM3 pdb_00007jm3 10.2210/pdb7jm3/pdb WWPDB D_1000251005 ? ? EMDB EMD-22384 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-08-12 2 'Structure model' 1 1 2020-10-14 3 'Structure model' 1 2 2024-03-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' em_3d_fitting_list 7 3 'Structure model' pdbx_initial_refinement_model 8 3 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_em_3d_fitting_list.accession_code' 4 3 'Structure model' '_em_3d_fitting_list.initial_refinement_model_id' 5 3 'Structure model' '_em_3d_fitting_list.source_name' 6 3 'Structure model' '_em_3d_fitting_list.type' 7 3 'Structure model' '_pdbx_struct_oper_list.name' 8 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 9 3 'Structure model' '_pdbx_struct_oper_list.type' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7JM3 _pdbx_database_status.recvd_initial_deposition_date 2020-07-30 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Full-length three-dimensional structure of the influenza A virus M1 protein and its organization into a matrix layer' _pdbx_database_related.db_id EMD-22384 _pdbx_database_related.content_type 'associated EM volume' # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Su, Z.' 1 0000-0002-9279-1721 'Pintilie, G.' 2 0000-0002-0848-5335 'Selzer, L.' 3 0000-0002-7007-3841 'Chiu, W.' 4 0000-0002-8910-3078 'Kirkegaard, K.' 5 0000-0001-7628-3770 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? US ? ? primary 'Plos Biol.' ? ? 1545-7885 ? ? 18 ? e3000827 e3000827 'Full-length three-dimensional structure of the influenza A virus M1 protein and its organization into a matrix layer.' 2020 ? 10.1371/journal.pbio.3000827 32997652 ? ? ? ? ? ? ? ? US ? ? 1 'Plos Biol.' ? ? 1545-7885 ? ? ? ? ? ? 'Full-length three-dimensional structure of the influenza A virus M1 protein and its organization into a matrix layer' 2020 ? 10.17632/87pvmycwfm.1 ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Selzer, L.' 1 ? primary 'Su, Z.' 2 ? primary 'Pintilie, G.D.' 3 ? primary 'Chiu, W.' 4 0000-0002-8910-3078 primary 'Kirkegaard, K.' 5 0000-0001-7628-3770 1 'Selzer, L.' 6 0000-0002-7007-3841 1 'Su, Z.' 7 0000-0002-9279-1721 1 'Pintilie, G.' 8 0000-0002-0848-5335 1 'Chiu, W.' 9 0000-0002-8910-3078 1 'Kirkegaard, K.' 10 0000-0001-7628-3770 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Matrix protein 1' _entity.formula_weight 27827.152 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation V97K _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name M1 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SLLTEVETYVLSIIPSGPLKAEIAQRLEDVFAGKNTDLEVLMEWLKTRPILSPLTKGILGFVFTLTVPSERGLQRRRFVQ NALNGNGDPNNMDKAKKLYRKLKREITFHGAKEISLSYSAGALASCMGLIYNRMGAVTTEVAFGLVCATCEQIADSQHRS HRQMVTTTNPLIRHENRMVLASTTAKAMEQMAGSSEQAAEAMEVASQARQMVQAMRTIGTHPSSSAGLKNDLLENLQAYQ KRMGVQMQRFK ; _entity_poly.pdbx_seq_one_letter_code_can ;SLLTEVETYVLSIIPSGPLKAEIAQRLEDVFAGKNTDLEVLMEWLKTRPILSPLTKGILGFVFTLTVPSERGLQRRRFVQ NALNGNGDPNNMDKAKKLYRKLKREITFHGAKEISLSYSAGALASCMGLIYNRMGAVTTEVAFGLVCATCEQIADSQHRS HRQMVTTTNPLIRHENRMVLASTTAKAMEQMAGSSEQAAEAMEVASQARQMVQAMRTIGTHPSSSAGLKNDLLENLQAYQ KRMGVQMQRFK ; _entity_poly.pdbx_strand_id C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 LEU n 1 3 LEU n 1 4 THR n 1 5 GLU n 1 6 VAL n 1 7 GLU n 1 8 THR n 1 9 TYR n 1 10 VAL n 1 11 LEU n 1 12 SER n 1 13 ILE n 1 14 ILE n 1 15 PRO n 1 16 SER n 1 17 GLY n 1 18 PRO n 1 19 LEU n 1 20 LYS n 1 21 ALA n 1 22 GLU n 1 23 ILE n 1 24 ALA n 1 25 GLN n 1 26 ARG n 1 27 LEU n 1 28 GLU n 1 29 ASP n 1 30 VAL n 1 31 PHE n 1 32 ALA n 1 33 GLY n 1 34 LYS n 1 35 ASN n 1 36 THR n 1 37 ASP n 1 38 LEU n 1 39 GLU n 1 40 VAL n 1 41 LEU n 1 42 MET n 1 43 GLU n 1 44 TRP n 1 45 LEU n 1 46 LYS n 1 47 THR n 1 48 ARG n 1 49 PRO n 1 50 ILE n 1 51 LEU n 1 52 SER n 1 53 PRO n 1 54 LEU n 1 55 THR n 1 56 LYS n 1 57 GLY n 1 58 ILE n 1 59 LEU n 1 60 GLY n 1 61 PHE n 1 62 VAL n 1 63 PHE n 1 64 THR n 1 65 LEU n 1 66 THR n 1 67 VAL n 1 68 PRO n 1 69 SER n 1 70 GLU n 1 71 ARG n 1 72 GLY n 1 73 LEU n 1 74 GLN n 1 75 ARG n 1 76 ARG n 1 77 ARG n 1 78 PHE n 1 79 VAL n 1 80 GLN n 1 81 ASN n 1 82 ALA n 1 83 LEU n 1 84 ASN n 1 85 GLY n 1 86 ASN n 1 87 GLY n 1 88 ASP n 1 89 PRO n 1 90 ASN n 1 91 ASN n 1 92 MET n 1 93 ASP n 1 94 LYS n 1 95 ALA n 1 96 LYS n 1 97 LYS n 1 98 LEU n 1 99 TYR n 1 100 ARG n 1 101 LYS n 1 102 LEU n 1 103 LYS n 1 104 ARG n 1 105 GLU n 1 106 ILE n 1 107 THR n 1 108 PHE n 1 109 HIS n 1 110 GLY n 1 111 ALA n 1 112 LYS n 1 113 GLU n 1 114 ILE n 1 115 SER n 1 116 LEU n 1 117 SER n 1 118 TYR n 1 119 SER n 1 120 ALA n 1 121 GLY n 1 122 ALA n 1 123 LEU n 1 124 ALA n 1 125 SER n 1 126 CYS n 1 127 MET n 1 128 GLY n 1 129 LEU n 1 130 ILE n 1 131 TYR n 1 132 ASN n 1 133 ARG n 1 134 MET n 1 135 GLY n 1 136 ALA n 1 137 VAL n 1 138 THR n 1 139 THR n 1 140 GLU n 1 141 VAL n 1 142 ALA n 1 143 PHE n 1 144 GLY n 1 145 LEU n 1 146 VAL n 1 147 CYS n 1 148 ALA n 1 149 THR n 1 150 CYS n 1 151 GLU n 1 152 GLN n 1 153 ILE n 1 154 ALA n 1 155 ASP n 1 156 SER n 1 157 GLN n 1 158 HIS n 1 159 ARG n 1 160 SER n 1 161 HIS n 1 162 ARG n 1 163 GLN n 1 164 MET n 1 165 VAL n 1 166 THR n 1 167 THR n 1 168 THR n 1 169 ASN n 1 170 PRO n 1 171 LEU n 1 172 ILE n 1 173 ARG n 1 174 HIS n 1 175 GLU n 1 176 ASN n 1 177 ARG n 1 178 MET n 1 179 VAL n 1 180 LEU n 1 181 ALA n 1 182 SER n 1 183 THR n 1 184 THR n 1 185 ALA n 1 186 LYS n 1 187 ALA n 1 188 MET n 1 189 GLU n 1 190 GLN n 1 191 MET n 1 192 ALA n 1 193 GLY n 1 194 SER n 1 195 SER n 1 196 GLU n 1 197 GLN n 1 198 ALA n 1 199 ALA n 1 200 GLU n 1 201 ALA n 1 202 MET n 1 203 GLU n 1 204 VAL n 1 205 ALA n 1 206 SER n 1 207 GLN n 1 208 ALA n 1 209 ARG n 1 210 GLN n 1 211 MET n 1 212 VAL n 1 213 GLN n 1 214 ALA n 1 215 MET n 1 216 ARG n 1 217 THR n 1 218 ILE n 1 219 GLY n 1 220 THR n 1 221 HIS n 1 222 PRO n 1 223 SER n 1 224 SER n 1 225 SER n 1 226 ALA n 1 227 GLY n 1 228 LEU n 1 229 LYS n 1 230 ASN n 1 231 ASP n 1 232 LEU n 1 233 LEU n 1 234 GLU n 1 235 ASN n 1 236 LEU n 1 237 GLN n 1 238 ALA n 1 239 TYR n 1 240 GLN n 1 241 LYS n 1 242 ARG n 1 243 MET n 1 244 GLY n 1 245 VAL n 1 246 GLN n 1 247 MET n 1 248 GLN n 1 249 ARG n 1 250 PHE n 1 251 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 251 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'M1, M' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'A/Puerto Rico/8/1934 H1N1' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Influenza A virus (strain A/Puerto Rico/8/1934 H1N1)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 211044 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 2 2 SER SER C . n A 1 2 LEU 2 3 3 LEU LEU C . n A 1 3 LEU 3 4 4 LEU LEU C . n A 1 4 THR 4 5 5 THR THR C . n A 1 5 GLU 5 6 6 GLU GLU C . n A 1 6 VAL 6 7 7 VAL VAL C . n A 1 7 GLU 7 8 8 GLU GLU C . n A 1 8 THR 8 9 9 THR THR C . n A 1 9 TYR 9 10 10 TYR TYR C . n A 1 10 VAL 10 11 11 VAL VAL C . n A 1 11 LEU 11 12 12 LEU LEU C . n A 1 12 SER 12 13 13 SER SER C . n A 1 13 ILE 13 14 14 ILE ILE C . n A 1 14 ILE 14 15 15 ILE ILE C . n A 1 15 PRO 15 16 16 PRO PRO C . n A 1 16 SER 16 17 17 SER SER C . n A 1 17 GLY 17 18 18 GLY GLY C . n A 1 18 PRO 18 19 19 PRO PRO C . n A 1 19 LEU 19 20 20 LEU LEU C . n A 1 20 LYS 20 21 21 LYS LYS C . n A 1 21 ALA 21 22 22 ALA ALA C . n A 1 22 GLU 22 23 23 GLU GLU C . n A 1 23 ILE 23 24 24 ILE ILE C . n A 1 24 ALA 24 25 25 ALA ALA C . n A 1 25 GLN 25 26 26 GLN GLN C . n A 1 26 ARG 26 27 27 ARG ARG C . n A 1 27 LEU 27 28 28 LEU LEU C . n A 1 28 GLU 28 29 29 GLU GLU C . n A 1 29 ASP 29 30 30 ASP ASP C . n A 1 30 VAL 30 31 31 VAL VAL C . n A 1 31 PHE 31 32 32 PHE PHE C . n A 1 32 ALA 32 33 33 ALA ALA C . n A 1 33 GLY 33 34 34 GLY GLY C . n A 1 34 LYS 34 35 35 LYS LYS C . n A 1 35 ASN 35 36 36 ASN ASN C . n A 1 36 THR 36 37 37 THR THR C . n A 1 37 ASP 37 38 38 ASP ASP C . n A 1 38 LEU 38 39 39 LEU LEU C . n A 1 39 GLU 39 40 40 GLU GLU C . n A 1 40 VAL 40 41 41 VAL VAL C . n A 1 41 LEU 41 42 42 LEU LEU C . n A 1 42 MET 42 43 43 MET MET C . n A 1 43 GLU 43 44 44 GLU GLU C . n A 1 44 TRP 44 45 45 TRP TRP C . n A 1 45 LEU 45 46 46 LEU LEU C . n A 1 46 LYS 46 47 47 LYS LYS C . n A 1 47 THR 47 48 48 THR THR C . n A 1 48 ARG 48 49 49 ARG ARG C . n A 1 49 PRO 49 50 50 PRO PRO C . n A 1 50 ILE 50 51 51 ILE ILE C . n A 1 51 LEU 51 52 52 LEU LEU C . n A 1 52 SER 52 53 53 SER SER C . n A 1 53 PRO 53 54 54 PRO PRO C . n A 1 54 LEU 54 55 55 LEU LEU C . n A 1 55 THR 55 56 56 THR THR C . n A 1 56 LYS 56 57 57 LYS LYS C . n A 1 57 GLY 57 58 58 GLY GLY C . n A 1 58 ILE 58 59 59 ILE ILE C . n A 1 59 LEU 59 60 60 LEU LEU C . n A 1 60 GLY 60 61 61 GLY GLY C . n A 1 61 PHE 61 62 62 PHE PHE C . n A 1 62 VAL 62 63 63 VAL VAL C . n A 1 63 PHE 63 64 64 PHE PHE C . n A 1 64 THR 64 65 65 THR THR C . n A 1 65 LEU 65 66 66 LEU LEU C . n A 1 66 THR 66 67 67 THR THR C . n A 1 67 VAL 67 68 68 VAL VAL C . n A 1 68 PRO 68 69 69 PRO PRO C . n A 1 69 SER 69 70 70 SER SER C . n A 1 70 GLU 70 71 71 GLU GLU C . n A 1 71 ARG 71 72 72 ARG ARG C . n A 1 72 GLY 72 73 73 GLY GLY C . n A 1 73 LEU 73 74 74 LEU LEU C . n A 1 74 GLN 74 75 75 GLN GLN C . n A 1 75 ARG 75 76 76 ARG ARG C . n A 1 76 ARG 76 77 77 ARG ARG C . n A 1 77 ARG 77 78 78 ARG ARG C . n A 1 78 PHE 78 79 79 PHE PHE C . n A 1 79 VAL 79 80 80 VAL VAL C . n A 1 80 GLN 80 81 81 GLN GLN C . n A 1 81 ASN 81 82 82 ASN ASN C . n A 1 82 ALA 82 83 83 ALA ALA C . n A 1 83 LEU 83 84 84 LEU LEU C . n A 1 84 ASN 84 85 85 ASN ASN C . n A 1 85 GLY 85 86 86 GLY GLY C . n A 1 86 ASN 86 87 87 ASN ASN C . n A 1 87 GLY 87 88 88 GLY GLY C . n A 1 88 ASP 88 89 89 ASP ASP C . n A 1 89 PRO 89 90 90 PRO PRO C . n A 1 90 ASN 90 91 91 ASN ASN C . n A 1 91 ASN 91 92 92 ASN ASN C . n A 1 92 MET 92 93 93 MET MET C . n A 1 93 ASP 93 94 94 ASP ASP C . n A 1 94 LYS 94 95 95 LYS LYS C . n A 1 95 ALA 95 96 96 ALA ALA C . n A 1 96 LYS 96 97 97 LYS LYS C . n A 1 97 LYS 97 98 98 LYS LYS C . n A 1 98 LEU 98 99 99 LEU LEU C . n A 1 99 TYR 99 100 100 TYR TYR C . n A 1 100 ARG 100 101 101 ARG ARG C . n A 1 101 LYS 101 102 102 LYS LYS C . n A 1 102 LEU 102 103 103 LEU LEU C . n A 1 103 LYS 103 104 104 LYS LYS C . n A 1 104 ARG 104 105 105 ARG ARG C . n A 1 105 GLU 105 106 106 GLU GLU C . n A 1 106 ILE 106 107 107 ILE ILE C . n A 1 107 THR 107 108 108 THR THR C . n A 1 108 PHE 108 109 109 PHE PHE C . n A 1 109 HIS 109 110 110 HIS HIS C . n A 1 110 GLY 110 111 111 GLY GLY C . n A 1 111 ALA 111 112 112 ALA ALA C . n A 1 112 LYS 112 113 113 LYS LYS C . n A 1 113 GLU 113 114 114 GLU GLU C . n A 1 114 ILE 114 115 115 ILE ILE C . n A 1 115 SER 115 116 116 SER SER C . n A 1 116 LEU 116 117 117 LEU LEU C . n A 1 117 SER 117 118 118 SER SER C . n A 1 118 TYR 118 119 119 TYR TYR C . n A 1 119 SER 119 120 120 SER SER C . n A 1 120 ALA 120 121 121 ALA ALA C . n A 1 121 GLY 121 122 122 GLY GLY C . n A 1 122 ALA 122 123 123 ALA ALA C . n A 1 123 LEU 123 124 124 LEU LEU C . n A 1 124 ALA 124 125 125 ALA ALA C . n A 1 125 SER 125 126 126 SER SER C . n A 1 126 CYS 126 127 127 CYS CYS C . n A 1 127 MET 127 128 128 MET MET C . n A 1 128 GLY 128 129 129 GLY GLY C . n A 1 129 LEU 129 130 130 LEU LEU C . n A 1 130 ILE 130 131 131 ILE ILE C . n A 1 131 TYR 131 132 132 TYR TYR C . n A 1 132 ASN 132 133 133 ASN ASN C . n A 1 133 ARG 133 134 134 ARG ARG C . n A 1 134 MET 134 135 135 MET MET C . n A 1 135 GLY 135 136 136 GLY GLY C . n A 1 136 ALA 136 137 137 ALA ALA C . n A 1 137 VAL 137 138 138 VAL VAL C . n A 1 138 THR 138 139 139 THR THR C . n A 1 139 THR 139 140 140 THR THR C . n A 1 140 GLU 140 141 141 GLU GLU C . n A 1 141 VAL 141 142 142 VAL VAL C . n A 1 142 ALA 142 143 143 ALA ALA C . n A 1 143 PHE 143 144 144 PHE PHE C . n A 1 144 GLY 144 145 145 GLY GLY C . n A 1 145 LEU 145 146 146 LEU LEU C . n A 1 146 VAL 146 147 147 VAL VAL C . n A 1 147 CYS 147 148 148 CYS CYS C . n A 1 148 ALA 148 149 149 ALA ALA C . n A 1 149 THR 149 150 150 THR THR C . n A 1 150 CYS 150 151 151 CYS CYS C . n A 1 151 GLU 151 152 152 GLU GLU C . n A 1 152 GLN 152 153 153 GLN GLN C . n A 1 153 ILE 153 154 154 ILE ILE C . n A 1 154 ALA 154 155 155 ALA ALA C . n A 1 155 ASP 155 156 156 ASP ASP C . n A 1 156 SER 156 157 157 SER SER C . n A 1 157 GLN 157 158 158 GLN GLN C . n A 1 158 HIS 158 159 159 HIS HIS C . n A 1 159 ARG 159 160 160 ARG ARG C . n A 1 160 SER 160 161 161 SER SER C . n A 1 161 HIS 161 162 162 HIS HIS C . n A 1 162 ARG 162 163 163 ARG ARG C . n A 1 163 GLN 163 164 164 GLN GLN C . n A 1 164 MET 164 165 165 MET MET C . n A 1 165 VAL 165 166 166 VAL VAL C . n A 1 166 THR 166 167 167 THR THR C . n A 1 167 THR 167 168 168 THR THR C . n A 1 168 THR 168 169 169 THR THR C . n A 1 169 ASN 169 170 170 ASN ASN C . n A 1 170 PRO 170 171 171 PRO PRO C . n A 1 171 LEU 171 172 172 LEU LEU C . n A 1 172 ILE 172 173 173 ILE ILE C . n A 1 173 ARG 173 174 174 ARG ARG C . n A 1 174 HIS 174 175 175 HIS HIS C . n A 1 175 GLU 175 176 176 GLU GLU C . n A 1 176 ASN 176 177 177 ASN ASN C . n A 1 177 ARG 177 178 178 ARG ARG C . n A 1 178 MET 178 179 179 MET MET C . n A 1 179 VAL 179 180 180 VAL VAL C . n A 1 180 LEU 180 181 181 LEU LEU C . n A 1 181 ALA 181 182 182 ALA ALA C . n A 1 182 SER 182 183 183 SER SER C . n A 1 183 THR 183 184 184 THR THR C . n A 1 184 THR 184 185 185 THR THR C . n A 1 185 ALA 185 186 186 ALA ALA C . n A 1 186 LYS 186 187 187 LYS LYS C . n A 1 187 ALA 187 188 188 ALA ALA C . n A 1 188 MET 188 189 189 MET MET C . n A 1 189 GLU 189 190 190 GLU GLU C . n A 1 190 GLN 190 191 191 GLN GLN C . n A 1 191 MET 191 192 192 MET MET C . n A 1 192 ALA 192 193 193 ALA ALA C . n A 1 193 GLY 193 194 194 GLY GLY C . n A 1 194 SER 194 195 195 SER SER C . n A 1 195 SER 195 196 196 SER SER C . n A 1 196 GLU 196 197 197 GLU GLU C . n A 1 197 GLN 197 198 198 GLN GLN C . n A 1 198 ALA 198 199 199 ALA ALA C . n A 1 199 ALA 199 200 200 ALA ALA C . n A 1 200 GLU 200 201 201 GLU GLU C . n A 1 201 ALA 201 202 202 ALA ALA C . n A 1 202 MET 202 203 203 MET MET C . n A 1 203 GLU 203 204 204 GLU GLU C . n A 1 204 VAL 204 205 205 VAL VAL C . n A 1 205 ALA 205 206 206 ALA ALA C . n A 1 206 SER 206 207 207 SER SER C . n A 1 207 GLN 207 208 208 GLN GLN C . n A 1 208 ALA 208 209 209 ALA ALA C . n A 1 209 ARG 209 210 210 ARG ARG C . n A 1 210 GLN 210 211 211 GLN GLN C . n A 1 211 MET 211 212 212 MET MET C . n A 1 212 VAL 212 213 213 VAL VAL C . n A 1 213 GLN 213 214 214 GLN GLN C . n A 1 214 ALA 214 215 215 ALA ALA C . n A 1 215 MET 215 216 216 MET MET C . n A 1 216 ARG 216 217 217 ARG ARG C . n A 1 217 THR 217 218 218 THR THR C . n A 1 218 ILE 218 219 219 ILE ILE C . n A 1 219 GLY 219 220 220 GLY GLY C . n A 1 220 THR 220 221 221 THR THR C . n A 1 221 HIS 221 222 222 HIS HIS C . n A 1 222 PRO 222 223 223 PRO PRO C . n A 1 223 SER 223 224 224 SER SER C . n A 1 224 SER 224 225 225 SER SER C . n A 1 225 SER 225 226 226 SER SER C . n A 1 226 ALA 226 227 227 ALA ALA C . n A 1 227 GLY 227 228 228 GLY GLY C . n A 1 228 LEU 228 229 229 LEU LEU C . n A 1 229 LYS 229 230 230 LYS LYS C . n A 1 230 ASN 230 231 231 ASN ASN C . n A 1 231 ASP 231 232 232 ASP ASP C . n A 1 232 LEU 232 233 233 LEU LEU C . n A 1 233 LEU 233 234 234 LEU LEU C . n A 1 234 GLU 234 235 235 GLU GLU C . n A 1 235 ASN 235 236 236 ASN ASN C . n A 1 236 LEU 236 237 237 LEU LEU C . n A 1 237 GLN 237 238 238 GLN GLN C . n A 1 238 ALA 238 239 239 ALA ALA C . n A 1 239 TYR 239 240 240 TYR TYR C . n A 1 240 GLN 240 241 241 GLN GLN C . n A 1 241 LYS 241 242 242 LYS LYS C . n A 1 242 ARG 242 243 243 ARG ARG C . n A 1 243 MET 243 244 244 MET MET C . n A 1 244 GLY 244 245 245 GLY GLY C . n A 1 245 VAL 245 246 246 VAL VAL C . n A 1 246 GLN 246 247 247 GLN GLN C . n A 1 247 MET 247 248 248 MET MET C . n A 1 248 GLN 248 249 249 GLN GLN C . n A 1 249 ARG 249 250 250 ARG ARG C . n A 1 250 PHE 250 251 251 PHE PHE C . n A 1 251 LYS 251 252 252 LYS LYS C . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7JM3 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 7JM3 _struct.title 'Full-length three-dimensional structure of the influenza A virus M1 protein and its organization into a matrix layer' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7JM3 _struct_keywords.text 'influenza A, virus, matrix layer, M1 protein, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code H2KIU5_I34A1 _struct_ref.pdbx_db_accession H2KIU5 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SLLTEVETYVLSIIPSGPLKAEIAQRLEDVFAGKNTDLEVLMEWLKTRPILSPLTKGILGFVFTLTVPSERGLQRRRFVQ NALNGNGDPNNMDKAVKLYRKLKREITFHGAKEISLSYSAGALASCMGLIYNRMGAVTTEVAFGLVCATCEQIADSQHRS HRQMVTTTNPLIRHENRMVLASTTAKAMEQMAGSSEQAAEAMEVASQARQMVQAMRTIGTHPSSSAGLKNDLLENLQAYQ KRMGVQMQRFK ; _struct_ref.pdbx_align_begin 2 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7JM3 _struct_ref_seq.pdbx_strand_id C _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 251 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession H2KIU5 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 252 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 252 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 7JM3 _struct_ref_seq_dif.mon_id LYS _struct_ref_seq_dif.pdbx_pdb_strand_id C _struct_ref_seq_dif.seq_num 96 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code H2KIU5 _struct_ref_seq_dif.db_mon_id VAL _struct_ref_seq_dif.pdbx_seq_db_seq_num 97 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 97 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'representative helical assembly' ? 60-meric 60 2 'helical asymmetric unit' ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-60)' A 2 1 A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support microscopy _pdbx_struct_assembly_auth_evidence.details 'negative stain TEM and cryo-EM' # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'helical symmetry operation' ? ? -0.71812600 0.69591300 0.00000000 201.68500 -0.69591300 -0.71812600 0.00000000 475.19200 0.00000000 0.00000000 1.00000000 -56.84000 3 'helical symmetry operation' ? ? -0.48175400 0.87630700 0.00000000 119.60800 -0.87630700 -0.48175400 0.00000000 464.23800 0.00000000 0.00000000 1.00000000 -54.88000 4 'helical symmetry operation' ? ? -0.20278700 0.97922300 0.00000000 44.38100 -0.97922300 -0.20278700 0.00000000 429.63300 0.00000000 0.00000000 1.00000000 -52.92000 5 'helical symmetry operation' ? ? 0.09410830 0.99556200 0.00000000 -17.34560 -0.99556200 0.09410830 0.00000000 374.43900 0.00000000 -0.00000000 1.00000000 -50.96000 6 'helical symmetry operation' ? ? 0.38268300 0.92388000 0.00000000 -60.11400 -0.92388000 0.38268300 0.00000000 303.53500 0.00000000 -0.00000000 1.00000000 -49.00000 7 'helical symmetry operation' ? ? 0.63742400 0.77051300 0.00000000 -80.14310 -0.77051300 0.63742400 0.00000000 223.18900 0.00000000 -0.00000000 1.00000000 -47.04000 8 'helical symmetry operation' ? ? 0.83580700 0.54902300 0.00000000 -75.66180 -0.54902300 0.83580700 0.00000000 140.50600 0.00000000 -0.00000000 1.00000000 -45.08000 9 'helical symmetry operation' ? ? 0.96029400 0.27899100 0.00000000 -47.06650 -0.27899100 0.96029400 0.00000000 62.79550 0.00000000 -0.00000000 1.00000000 -43.12000 10 'helical symmetry operation' ? ? 0.99987700 -0.01570730 0.00000000 3.11474 0.01570730 0.99987700 0.00000000 -3.07131 -0.00000000 0.00000000 1.00000000 -41.16000 11 'helical symmetry operation' ? ? 0.95105700 -0.30901700 0.00000000 70.44510 0.30901700 0.95105700 0.00000000 -51.27100 -0.00000000 0.00000000 1.00000000 -39.20000 12 'helical symmetry operation' ? ? 0.81815000 -0.57500500 0.00000000 148.97200 0.57500500 0.81815000 0.00000000 -77.54220 -0.00000000 0.00000000 1.00000000 -37.24000 13 'helical symmetry operation' ? ? 0.61290700 -0.79015500 0.00000000 231.75100 0.79015500 0.61290700 0.00000000 -79.56200 -0.00000000 0.00000000 1.00000000 -35.28000 14 'helical symmetry operation' ? ? 0.35347500 -0.93544400 0.00000000 311.46600 0.93544400 0.35347500 0.00000000 -57.15180 -0.00000000 0.00000000 1.00000000 -33.32000 15 'helical symmetry operation' ? ? 0.06279050 -0.99802700 0.00000000 381.06700 0.99802700 0.06279050 0.00000000 -12.29320 -0.00000000 0.00000000 1.00000000 -31.36000 16 'helical symmetry operation' ? ? -0.23344500 -0.97237000 0.00000000 434.40000 0.97237000 -0.23344500 0.00000000 51.04790 0.00000000 0.00000000 1.00000000 -29.40000 17 'helical symmetry operation' ? ? -0.50904100 -0.86074200 0.00000000 466.75200 0.86074200 -0.50904100 0.00000000 127.27100 0.00000000 0.00000000 1.00000000 -27.44000 18 'helical symmetry operation' ? ? -0.73963100 -0.67301300 0.00000000 475.26000 0.67301300 -0.73963100 0.00000000 209.63700 0.00000000 0.00000000 1.00000000 -25.48000 19 'helical symmetry operation' ? ? -0.90482700 -0.42577900 0.00000000 459.17300 0.42577900 -0.90482700 0.00000000 290.86400 0.00000000 0.00000000 1.00000000 -23.52000 20 'helical symmetry operation' ? ? -0.99002400 -0.14090100 0.00000000 419.91400 0.14090100 -0.99002400 0.00000000 363.77000 0.00000000 0.00000000 1.00000000 -21.56000 21 'helical symmetry operation' ? ? -0.98768800 0.15643400 0.00000000 360.95300 -0.15643400 -0.98768800 0.00000000 421.90900 0.00000000 0.00000000 1.00000000 -19.60000 22 'helical symmetry operation' ? ? -0.89802800 0.43993900 0.00000000 287.50300 -0.43993900 -0.89802800 0.00000000 460.14100 0.00000000 0.00000000 1.00000000 -17.64000 23 'helical symmetry operation' ? ? -0.72896900 0.68454700 0.00000000 206.05800 -0.68454700 -0.72896900 0.00000000 475.08600 0.00000000 0.00000000 1.00000000 -15.68000 24 'helical symmetry operation' ? ? -0.49545900 0.86863200 0.00000000 123.81900 -0.86863200 -0.49545900 0.00000000 465.42200 0.00000000 0.00000000 1.00000000 -13.72000 25 'helical symmetry operation' ? ? -0.21814300 0.97591700 0.00000000 48.05780 -0.97591700 -0.21814300 0.00000000 432.00300 0.00000000 0.00000000 1.00000000 -11.76000 26 'helical symmetry operation' ? ? 0.07845910 0.99691700 0.00000000 -14.52810 -0.99691700 0.07845910 0.00000000 377.78500 0.00000000 -0.00000000 1.00000000 -9.80000 27 'helical symmetry operation' ? ? 0.36812500 0.92977600 0.00000000 -58.40500 -0.92977600 0.36812500 0.00000000 307.56100 0.00000000 -0.00000000 1.00000000 -7.84000 28 'helical symmetry operation' ? ? 0.62524300 0.78043000 0.00000000 -79.69360 -0.78043000 0.62524300 0.00000000 227.54000 0.00000000 -0.00000000 1.00000000 -5.88000 29 'helical symmetry operation' ? ? 0.82708100 0.56208300 0.00000000 -76.51160 -0.56208300 0.82708100 0.00000000 144.79700 0.00000000 -0.00000000 1.00000000 -3.92000 30 'helical symmetry operation' ? ? 0.95579300 0.29404000 0.00000000 -49.14040 -0.29404000 0.95579300 0.00000000 66.64690 0.00000000 -0.00000000 1.00000000 -1.96000 31 'helical symmetry operation' ? ? 0.95579300 -0.29404000 0.00000000 66.56490 0.29404000 0.95579300 0.00000000 -49.25140 -0.00000000 0.00000000 1.00000000 1.96000 32 'helical symmetry operation' ? ? 0.82708100 -0.56208300 0.00000000 144.66900 0.56208300 0.82708100 0.00000000 -76.75270 -0.00000000 0.00000000 1.00000000 3.92000 33 'helical symmetry operation' ? ? 0.62524300 -0.78043000 0.00000000 227.40700 0.78043000 0.62524300 0.00000000 -80.07250 -0.00000000 0.00000000 1.00000000 5.88000 34 'helical symmetry operation' ? ? 0.36812500 -0.92977600 0.00000000 307.46400 0.92977600 0.36812500 0.00000000 -58.91720 -0.00000000 0.00000000 1.00000000 7.84000 35 'helical symmetry operation' ? ? 0.07845910 -0.99691700 0.00000000 377.76000 0.99691700 0.07845910 0.00000000 -15.15740 -0.00000000 0.00000000 1.00000000 9.80000 36 'helical symmetry operation' ? ? -0.21814300 -0.97591700 0.00000000 432.08300 0.97591700 -0.21814300 0.00000000 47.33820 0.00000000 0.00000000 1.00000000 11.76000 37 'helical symmetry operation' ? ? -0.49545900 -0.86863200 0.00000000 465.62700 0.86863200 -0.49545900 0.00000000 123.04400 0.00000000 0.00000000 1.00000000 13.72000 38 'helical symmetry operation' ? ? -0.72896900 -0.68454700 0.00000000 475.42800 0.68454700 -0.72896900 0.00000000 205.26600 0.00000000 0.00000000 1.00000000 15.68000 39 'helical symmetry operation' ? ? -0.89802800 -0.43993900 0.00000000 460.61900 0.43993900 -0.89802800 0.00000000 286.73600 0.00000000 0.00000000 1.00000000 17.64000 40 'helical symmetry operation' ? ? -0.98768800 -0.15643400 0.00000000 422.51000 0.15643400 -0.98768800 0.00000000 360.24900 0.00000000 0.00000000 1.00000000 19.60000 41 'helical symmetry operation' ? ? -0.99002400 0.14090100 0.00000000 364.46900 -0.14090100 -0.99002400 0.00000000 419.30700 0.00000000 0.00000000 1.00000000 21.56000 42 'helical symmetry operation' ? ? -0.90482700 0.42577900 0.00000000 291.62900 -0.42577900 -0.90482700 0.00000000 458.68800 0.00000000 0.00000000 1.00000000 23.52000 43 'helical symmetry operation' ? ? -0.73963100 0.67301300 0.00000000 210.42900 -0.67301300 -0.73963100 0.00000000 474.91000 0.00000000 0.00000000 1.00000000 25.48000 44 'helical symmetry operation' ? ? -0.50904100 0.86074200 0.00000000 128.04800 -0.86074200 -0.50904100 0.00000000 466.53900 0.00000000 0.00000000 1.00000000 27.44000 45 'helical symmetry operation' ? ? -0.23344500 0.97237000 0.00000000 51.77140 -0.97237000 -0.23344500 0.00000000 434.31500 0.00000000 0.00000000 1.00000000 29.40000 46 'helical symmetry operation' ? ? 0.06279050 0.99802700 0.00000000 -11.65840 -0.99802700 0.06279050 0.00000000 381.08700 0.00000000 -0.00000000 1.00000000 31.36000 47 'helical symmetry operation' ? ? 0.35347500 0.93544400 0.00000000 -56.63300 -0.93544400 0.35347500 0.00000000 311.56100 0.00000000 -0.00000000 1.00000000 33.32000 48 'helical symmetry operation' ? ? 0.61290700 0.79015500 0.00000000 -79.17580 -0.79015500 0.61290700 0.00000000 231.88400 0.00000000 -0.00000000 1.00000000 35.28000 49 'helical symmetry operation' ? ? 0.81815000 0.57500500 0.00000000 -77.29390 -0.57500500 0.81815000 0.00000000 149.10100 0.00000000 -0.00000000 1.00000000 37.24000 50 'helical symmetry operation' ? ? 0.95105700 0.30901700 0.00000000 -51.15360 -0.30901700 0.95105700 0.00000000 70.53040 0.00000000 -0.00000000 1.00000000 39.20000 51 'helical symmetry operation' ? ? 0.99987700 0.01570730 0.00000000 -3.06611 -0.01570730 0.99987700 0.00000000 3.11985 0.00000000 -0.00000000 1.00000000 41.16000 52 'helical symmetry operation' ? ? 0.96029400 -0.27899100 0.00000000 62.71700 0.27899100 0.96029400 0.00000000 -47.17100 -0.00000000 0.00000000 1.00000000 43.12000 53 'helical symmetry operation' ? ? 0.83580700 -0.54902300 0.00000000 140.38000 0.54902300 0.83580700 0.00000000 -75.89570 -0.00000000 0.00000000 1.00000000 45.08000 54 'helical symmetry operation' ? ? 0.63742400 -0.77051300 0.00000000 223.05500 0.77051300 0.63742400 0.00000000 -80.51470 -0.00000000 0.00000000 1.00000000 47.04000 55 'helical symmetry operation' ? ? 0.38268300 -0.92388000 0.00000000 303.43400 0.92388000 0.38268300 0.00000000 -60.61950 -0.00000000 0.00000000 1.00000000 49.00000 56 'helical symmetry operation' ? ? 0.09410830 -0.99556200 0.00000000 374.41000 0.99556200 0.09410830 0.00000000 -17.96920 -0.00000000 0.00000000 1.00000000 50.96000 57 'helical symmetry operation' ? ? -0.20278700 -0.97922300 0.00000000 429.70700 0.97922300 -0.20278700 0.00000000 43.66530 0.00000000 0.00000000 1.00000000 52.92000 58 'helical symmetry operation' ? ? -0.48175400 -0.87630700 0.00000000 464.43600 0.87630700 -0.48175400 0.00000000 118.83500 0.00000000 0.00000000 1.00000000 54.88000 59 'helical symmetry operation' ? ? -0.71812600 -0.69591300 0.00000000 475.52800 0.69591300 -0.71812600 0.00000000 200.89300 0.00000000 0.00000000 1.00000000 56.84000 60 'helical symmetry operation' ? ? -0.89100700 -0.45399000 0.00000000 462.00000 0.45399000 -0.89100700 0.00000000 282.58500 0.00000000 0.00000000 1.00000000 58.80000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLU A 7 ? SER A 12 ? GLU C 8 SER C 13 1 ? 6 HELX_P HELX_P2 AA2 GLY A 17 ? GLY A 33 ? GLY C 18 GLY C 34 1 ? 17 HELX_P HELX_P3 AA3 ASP A 37 ? LEU A 45 ? ASP C 38 LEU C 46 1 ? 9 HELX_P HELX_P4 AA4 SER A 52 ? VAL A 67 ? SER C 53 VAL C 68 1 ? 16 HELX_P HELX_P5 AA5 ARG A 76 ? ASN A 81 ? ARG C 77 ASN C 82 1 ? 6 HELX_P HELX_P6 AA6 ASP A 88 ? ASN A 90 ? ASP C 89 ASN C 91 5 ? 3 HELX_P HELX_P7 AA7 ASN A 91 ? LYS A 103 ? ASN C 92 LYS C 104 1 ? 13 HELX_P HELX_P8 AA8 PHE A 108 ? SER A 117 ? PHE C 109 SER C 118 1 ? 10 HELX_P HELX_P9 AA9 GLY A 121 ? TYR A 131 ? GLY C 122 TYR C 132 1 ? 11 HELX_P HELX_P10 AB1 THR A 138 ? CYS A 150 ? THR C 139 CYS C 151 1 ? 13 HELX_P HELX_P11 AB2 CYS A 150 ? ARG A 159 ? CYS C 151 ARG C 160 1 ? 10 HELX_P HELX_P12 AB3 ASN A 169 ? SER A 194 ? ASN C 170 SER C 195 1 ? 26 HELX_P HELX_P13 AB4 GLU A 200 ? GLY A 219 ? GLU C 201 GLY C 220 1 ? 20 HELX_P HELX_P14 AB5 LEU A 228 ? LEU A 236 ? LEU C 229 LEU C 237 1 ? 9 HELX_P HELX_P15 AB6 ALA A 238 ? MET A 243 ? ALA C 239 MET C 244 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO C 50 ? ? -68.98 -160.77 2 1 LEU C 52 ? ? -172.47 128.82 3 1 GLU C 71 ? ? -104.96 75.88 4 1 LEU C 74 ? ? -78.52 -169.40 5 1 ARG C 76 ? ? -59.56 106.02 6 1 GLN C 241 ? ? -84.46 49.15 7 1 VAL C 246 ? ? -102.10 -74.72 8 1 GLN C 247 ? ? 172.17 171.75 9 1 MET C 248 ? ? -146.55 -159.42 10 1 ARG C 250 ? ? -131.36 -31.17 # _pdbx_helical_symmetry.entry_id 7JM3 _pdbx_helical_symmetry.number_of_operations 60 _pdbx_helical_symmetry.rotation_per_n_subunits 17.1 _pdbx_helical_symmetry.rise_per_n_subunits 1.96 _pdbx_helical_symmetry.n_subunits_divisor 1 _pdbx_helical_symmetry.dyad_axis no _pdbx_helical_symmetry.circular_symmetry 1 # _em_3d_fitting.entry_id 7JM3 _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol 'AB INITIO MODEL' _em_3d_fitting.ref_space REAL _em_3d_fitting.target_criteria 'Correlation coefficient' _em_3d_fitting.method ? # _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.id 1 _em_3d_fitting_list.details ? _em_3d_fitting_list.pdb_chain_id ? _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.pdb_entry_id 1EA3 _em_3d_fitting_list.initial_refinement_model_id 1 _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code 1EA3 # _em_3d_reconstruction.entry_id 7JM3 _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm 'FOURIER SPACE' _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages 200 _em_3d_reconstruction.num_particles 56602 _em_3d_reconstruction.resolution 3.4 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type HELICAL _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'M1-V97K oligomer' _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 7JM3 _em_image_scans.id 1 _em_image_scans.dimension_height 3710 _em_image_scans.dimension_width 3838 _em_image_scans.frames_per_image 20 _em_image_scans.image_recording_id 1 _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.used_frames_per_image 1-20 _em_image_scans.citation_id ? _em_image_scans.number_digital_images ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.details ? # _em_imaging.id 1 _em_imaging.entry_id 7JM3 _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure BASIC _em_imaging.c2_aperture_diameter 70 _em_imaging.calibrated_defocus_max 4300 _em_imaging.calibrated_defocus_min 300 _em_imaging.calibrated_magnification ? _em_imaging.cryogen NITROGEN _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_max ? _em_imaging.nominal_defocus_min ? _em_imaging.nominal_magnification 165000 _em_imaging.recording_temperature_maximum 78 _em_imaging.recording_temperature_minimum 78 _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 200 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.method ? _em_sample_support.film_material ? # _em_virus_entity.entity_assembly_id 1 _em_virus_entity.empty NO _em_virus_entity.enveloped YES _em_virus_entity.virus_isolate STRAIN _em_virus_entity.virus_type VIRION _em_virus_entity.id 1 _em_virus_entity.virus_host_category ? _em_virus_entity.details ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 277 _em_vitrification.cryogen_name ETHANE _em_vitrification.details 'Blot for 3 seconds once before plunging.' _em_vitrification.humidity 100 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.entry_id 7JM3 _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7JM3 _em_experiment.id 1 _em_experiment.aggregation_state FILAMENT _em_experiment.reconstruction_method HELICAL _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # loop_ _em_buffer_component.buffer_id _em_buffer_component.id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.name 1 1 50 mM ? '2-[4-(2-hydroxyethyl)piperazin-1-yl]ethanesulfonic acid' 1 2 2 M NaCl 'sodium chloride' # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.units KILODALTONS/NANOMETER _em_entity_assembly_molwt.value 143 # _em_entity_assembly_naturalsource.id 1 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 211044 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Influenza A virus (A/Puerto Rico/8/1934(H1N1))' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 1 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.ncbi_tax_id 469008 _em_entity_assembly_recombinant.organism 'Escherichia coli BL21(DE3)' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.angular_rotation_per_subunit 17.1 _em_helical_entity.axial_rise_per_subunit 1.96 _em_helical_entity.axial_symmetry C1 _em_helical_entity.details ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 36 _em_image_recording.average_exposure_time 4 _em_image_recording.details ? _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'GATAN K2 QUANTUM (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 2 _em_image_recording.num_real_images 440 # _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_name 'GIF Bioquantum' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.energyfilter_slit_width 20 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? # _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.details ? _em_particle_selection.method ? _em_particle_selection.num_particles_selected 2268 _em_particle_selection.reference_model ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? EMAN2 2.23 1 ? ? 2 'IMAGE ACQUISITION' Manual SerialEM ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? CTFFIND 4.1.18 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? Coot 0.8 ? 1 ? 8 OTHER ? ? ? ? ? ? 9 'MODEL REFINEMENT' ? PHENIX 1.17 ? 1 ? 10 'INITIAL EULER ASSIGNMENT' ? RELION 3.0.6 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? RELION 3.0.6 1 ? ? 12 CLASSIFICATION ? RELION 3.0.6 1 ? ? 13 RECONSTRUCTION ? RELION 3.0.6 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration 5 _em_specimen.details 'Influenza A virus matrix protein with V97K mutation assembled in vitro' _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Library of Medicine (NIH/NLM)' 'United States' P41GM103832 1 'National Institutes of Health/National Library of Medicine (NIH/NLM)' 'United States' S10OD021600 2 'National Institutes of Health/National Library of Medicine (NIH/NLM)' 'United States' 'P30 CA124435' 3 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1EA3 # _atom_sites.entry_id 7JM3 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_