data_7KKV # _entry.id 7KKV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7KKV pdb_00007kkv 10.2210/pdb7kkv/pdb WWPDB D_1000252640 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'Entry from the same paper' 7K9B unspecified PDB 'Entry from the same paper' 7K9C unspecified PDB 'Entry from the same paper' 7K9D unspecified PDB 'Entry from the same paper' 7K9E unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7KKV _pdbx_database_status.recvd_initial_deposition_date 2020-10-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yang, Y.' 1 0000-0001-9061-3828 'Breaker, R.R.' 2 0000-0002-2165-536X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 118 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Structure of a bacterial OapB protein with its OLE RNA target gives insights into the architecture of the OLE ribonucleoprotein complex. ; _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.2020393118 _citation.pdbx_database_id_PubMed 33619097 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yang, Y.' 1 ? primary 'Harris, K.A.' 2 ? primary 'Widner, D.L.' 3 ? primary 'Breaker, R.R.' 4 0000-0003-3028-5863 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 7KKV _cell.details ? _cell.formula_units_Z ? _cell.length_a 98.947 _cell.length_a_esd ? _cell.length_b 98.947 _cell.length_b_esd ? _cell.length_c 197.852 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 18 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KKV _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'OLE-associated protein B' 11378.141 1 ? ? ? ? 2 polymer syn 'OLE* RNA' 19465.389 1 ? ? ? ? 3 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 1 ? ? ? ? 4 non-polymer syn '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 238.305 1 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 6 water nat water 18.015 278 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name OapB # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPSPEIGQIVKIVKGRDRDQFSVIIKRVDDRFVYIADGDKRKVDRAKRKNMNHLKLIDHISPEVRHSFEETGKVTNGKLR FALKKFLEEHADLLKEGE ; ;GPSPEIGQIVKIVKGRDRDQFSVIIKRVDDRFVYIADGDKRKVDRAKRKNMNHLKLIDHISPEVRHSFEETGKVTNGKLR FALKKFLEEHADLLKEGE ; A ? 2 polyribonucleotide no yes '(GTP)GCCAGUCUGGCGUUUGGUGACAGCGCCAAGUUCUUCGGAAUUGGGAAAUCCUACUGGCC' GGCCAGUCUGGCGUUUGGUGACAGCGCCAAGUUCUUCGGAAUUGGGAAAUCCUACUGGCC B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 SER n 1 4 PRO n 1 5 GLU n 1 6 ILE n 1 7 GLY n 1 8 GLN n 1 9 ILE n 1 10 VAL n 1 11 LYS n 1 12 ILE n 1 13 VAL n 1 14 LYS n 1 15 GLY n 1 16 ARG n 1 17 ASP n 1 18 ARG n 1 19 ASP n 1 20 GLN n 1 21 PHE n 1 22 SER n 1 23 VAL n 1 24 ILE n 1 25 ILE n 1 26 LYS n 1 27 ARG n 1 28 VAL n 1 29 ASP n 1 30 ASP n 1 31 ARG n 1 32 PHE n 1 33 VAL n 1 34 TYR n 1 35 ILE n 1 36 ALA n 1 37 ASP n 1 38 GLY n 1 39 ASP n 1 40 LYS n 1 41 ARG n 1 42 LYS n 1 43 VAL n 1 44 ASP n 1 45 ARG n 1 46 ALA n 1 47 LYS n 1 48 ARG n 1 49 LYS n 1 50 ASN n 1 51 MET n 1 52 ASN n 1 53 HIS n 1 54 LEU n 1 55 LYS n 1 56 LEU n 1 57 ILE n 1 58 ASP n 1 59 HIS n 1 60 ILE n 1 61 SER n 1 62 PRO n 1 63 GLU n 1 64 VAL n 1 65 ARG n 1 66 HIS n 1 67 SER n 1 68 PHE n 1 69 GLU n 1 70 GLU n 1 71 THR n 1 72 GLY n 1 73 LYS n 1 74 VAL n 1 75 THR n 1 76 ASN n 1 77 GLY n 1 78 LYS n 1 79 LEU n 1 80 ARG n 1 81 PHE n 1 82 ALA n 1 83 LEU n 1 84 LYS n 1 85 LYS n 1 86 PHE n 1 87 LEU n 1 88 GLU n 1 89 GLU n 1 90 HIS n 1 91 ALA n 1 92 ASP n 1 93 LEU n 1 94 LEU n 1 95 LYS n 1 96 GLU n 1 97 GLY n 1 98 GLU n 2 1 GTP n 2 2 G n 2 3 C n 2 4 C n 2 5 A n 2 6 G n 2 7 U n 2 8 C n 2 9 U n 2 10 G n 2 11 G n 2 12 C n 2 13 G n 2 14 U n 2 15 U n 2 16 U n 2 17 G n 2 18 G n 2 19 U n 2 20 G n 2 21 A n 2 22 C n 2 23 A n 2 24 G n 2 25 C n 2 26 G n 2 27 C n 2 28 C n 2 29 A n 2 30 A n 2 31 G n 2 32 U n 2 33 U n 2 34 C n 2 35 U n 2 36 U n 2 37 C n 2 38 G n 2 39 G n 2 40 A n 2 41 A n 2 42 U n 2 43 U n 2 44 G n 2 45 G n 2 46 G n 2 47 A n 2 48 A n 2 49 A n 2 50 U n 2 51 C n 2 52 C n 2 53 U n 2 54 A n 2 55 C n 2 56 U n 2 57 G n 2 58 G n 2 59 C n 2 60 C n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 98 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BH0157 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 272558 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 60 _pdbx_entity_src_syn.organism_scientific 'Bacillus halodurans C-125' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 272558 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP Q9KGD7_BACHD Q9KGD7 ? 1 ;GPSPEIGQIVKIVKGRDRDQFSVIIKRVDDRFVYIADGDKRKVDRAKRKNMNHLKLIDHISPEVRHSFEETGKVTNGKLR FALKKFLEEHADLLKEGE ; 5 2 PDB 7KKV 7KKV ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7KKV A 1 ? 98 ? Q9KGD7 5 ? 102 ? 5 102 2 2 7KKV B 1 ? 60 ? 7KKV 484 ? 543 ? 484 543 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 EPE non-polymer . '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' HEPES 'C8 H18 N2 O4 S' 238.305 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7KKV _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.01 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 59.2 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM HEPES (pH 7.0 to 7.5), 200 mM NH4Cl and 39 to 42.5% 2-Methyl-2,4-pentanediol (MPD)' _exptl_crystal_grow.pdbx_pH_range '7.0 - 7.5' # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-09-27 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97911 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97911 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7KKV _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.950 _reflns.d_resolution_low 42.840 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 27246 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.500 _reflns.pdbx_Rmerge_I_obs 0.029 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 20.500 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.033 _reflns.pdbx_Rpim_I_all 0.015 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 123752 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.000 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 1.950 2.000 ? ? 8739 ? ? ? 1855 96.900 ? ? ? ? 1.710 ? ? ? ? ? ? ? ? 4.700 ? ? ? 1.000 1.922 0.867 ? 1 1 0.490 ? ? 8.930 42.840 ? ? 1284 ? ? ? 315 95.700 ? ? ? ? 0.020 ? ? ? ? ? ? ? ? 4.100 ? ? ? 65.700 0.023 0.012 ? 2 1 0.999 ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 224.960 _refine.B_iso_mean 75.9925 _refine.B_iso_min 30.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7KKV _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.0000 _refine.ls_d_res_low 41.8750 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 25240 _refine.ls_number_reflns_R_free 1261 _refine.ls_number_reflns_R_work 23979 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.9000 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1703 _refine.ls_R_factor_R_free 0.1880 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1693 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.350 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 7K9D _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 25.3100 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1800 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.0000 _refine_hist.d_res_low 41.8750 _refine_hist.number_atoms_solvent 278 _refine_hist.number_atoms_total 2327 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 149 _refine_hist.pdbx_B_iso_mean_ligand 73.67 _refine_hist.pdbx_B_iso_mean_solvent 75.20 _refine_hist.pdbx_number_atoms_protein 736 _refine_hist.pdbx_number_atoms_nucleic_acid 1288 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.0000 2.0801 . . 138 2603 98.0000 . . . 0.3260 0.0000 0.3225 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0801 2.1748 . . 137 2607 98.0000 . . . 0.3011 0.0000 0.2739 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1748 2.2894 . . 138 2637 99.0000 . . . 0.2862 0.0000 0.2509 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2894 2.4328 . . 139 2645 99.0000 . . . 0.2455 0.0000 0.2313 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4328 2.6206 . . 139 2645 99.0000 . . . 0.2753 0.0000 0.2312 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6206 2.8843 . . 140 2663 99.0000 . . . 0.3147 0.0000 0.2427 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8843 3.3015 . . 140 2686 99.0000 . . . 0.1808 0.0000 0.1634 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.3015 4.1590 . . 142 2694 99.0000 . . . 0.1419 0.0000 0.1454 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.1590 41.8750 . . 148 2799 99.0000 . . . 0.1706 0.0000 0.1451 . . . . . . . . . . . # _struct.entry_id 7KKV _struct.title 'Crystal structure of Bacillus halodurans OapB in complex with its OLE RNA target (native, crystal form I)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7KKV _struct_keywords.text 'ribonucleoprotein complex, OLE RNA, noncoding RNA, RNA, RNA-BINDING PROTEIN-RNA complex' _struct_keywords.pdbx_keywords 'RNA-BINDING PROTEIN/RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 6 ? H N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 42 ? ALA A 46 ? LYS A 46 ALA A 50 5 ? 5 HELX_P HELX_P2 AA2 SER A 61 ? GLY A 72 ? SER A 65 GLY A 76 1 ? 12 HELX_P HELX_P3 AA3 THR A 75 ? GLU A 89 ? THR A 79 GLU A 93 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B GTP 1 "O3'" ? ? ? 1_555 B G 2 P ? ? B GTP 484 B G 485 1_555 ? ? ? ? ? ? ? 1.600 ? ? metalc1 metalc ? ? B U 9 OP1 ? ? ? 1_555 F MG . MG ? ? B U 492 B MG 603 1_555 ? ? ? ? ? ? ? 2.391 ? ? metalc2 metalc ? ? B A 23 OP1 ? ? ? 1_555 F MG . MG ? ? B A 506 B MG 603 1_555 ? ? ? ? ? ? ? 2.395 ? ? metalc3 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? B MG 602 B HOH 734 1_555 ? ? ? ? ? ? ? 2.076 ? ? metalc4 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? B MG 602 B HOH 800 1_555 ? ? ? ? ? ? ? 2.076 ? ? metalc5 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? B MG 602 B HOH 810 1_555 ? ? ? ? ? ? ? 2.080 ? ? metalc6 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? B MG 602 B HOH 902 6_556 ? ? ? ? ? ? ? 2.078 ? ? metalc7 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? B MG 602 B HOH 909 6_556 ? ? ? ? ? ? ? 2.071 ? ? metalc8 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? B MG 602 B HOH 918 1_555 ? ? ? ? ? ? ? 2.075 ? ? metalc9 metalc ? ? F MG . MG ? ? ? 1_555 H HOH . O ? ? B MG 603 B HOH 725 1_555 ? ? ? ? ? ? ? 2.074 ? ? metalc10 metalc ? ? F MG . MG ? ? ? 1_555 H HOH . O ? ? B MG 603 B HOH 737 1_555 ? ? ? ? ? ? ? 2.091 ? ? metalc11 metalc ? ? F MG . MG ? ? ? 1_555 H HOH . O ? ? B MG 603 B HOH 847 1_555 ? ? ? ? ? ? ? 2.079 ? ? metalc12 metalc ? ? F MG . MG ? ? ? 1_555 H HOH . O ? ? B MG 603 B HOH 896 1_555 ? ? ? ? ? ? ? 2.075 ? ? hydrog1 hydrog ? ? B GTP 1 N1 ? ? ? 1_555 B C 60 N3 ? ? B GTP 484 B C 543 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B GTP 1 N2 ? ? ? 1_555 B C 60 O2 ? ? B GTP 484 B C 543 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B GTP 1 O6 ? ? ? 1_555 B C 60 N4 ? ? B GTP 484 B C 543 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B G 2 N1 ? ? ? 1_555 B C 59 N3 ? ? B G 485 B C 542 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B G 2 N2 ? ? ? 1_555 B C 59 O2 ? ? B G 485 B C 542 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B G 2 O6 ? ? ? 1_555 B C 59 N4 ? ? B G 485 B C 542 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B C 3 N3 ? ? ? 1_555 B G 58 N1 ? ? B C 486 B G 541 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B C 3 N4 ? ? ? 1_555 B G 58 O6 ? ? B C 486 B G 541 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B C 3 O2 ? ? ? 1_555 B G 58 N2 ? ? B C 486 B G 541 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B C 4 N3 ? ? ? 1_555 B G 57 N1 ? ? B C 487 B G 540 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B C 4 N4 ? ? ? 1_555 B G 57 O6 ? ? B C 487 B G 540 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 57 N2 ? ? B C 487 B G 540 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B A 5 N1 ? ? ? 1_555 B U 56 N3 ? ? B A 488 B U 539 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B A 5 N6 ? ? ? 1_555 B U 56 O4 ? ? B A 488 B U 539 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B G 6 N2 ? ? ? 1_555 B A 21 N3 ? ? B G 489 B A 504 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog16 hydrog ? ? B G 6 N1 ? ? ? 1_555 B C 55 N3 ? ? B G 489 B C 538 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B G 6 N2 ? ? ? 1_555 B C 55 O2 ? ? B G 489 B C 538 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B G 6 O6 ? ? ? 1_555 B C 55 N4 ? ? B G 489 B C 538 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B U 7 N3 ? ? ? 1_555 B A 54 N1 ? ? B U 490 B A 537 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B U 7 O4 ? ? ? 1_555 B A 54 N6 ? ? B U 490 B A 537 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B C 8 N4 ? ? ? 1_555 B U 53 O4 ? ? B C 491 B U 536 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog22 hydrog ? ? B U 9 N3 ? ? ? 1_555 B A 29 N1 ? ? B U 492 B A 512 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B U 9 O4 ? ? ? 1_555 B A 29 N6 ? ? B U 492 B A 512 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B G 10 N1 ? ? ? 1_555 B C 28 N3 ? ? B G 493 B C 511 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B G 10 N2 ? ? ? 1_555 B C 28 O2 ? ? B G 493 B C 511 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B G 10 O6 ? ? ? 1_555 B C 28 N4 ? ? B G 493 B C 511 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B G 11 N1 ? ? ? 1_555 B C 27 N3 ? ? B G 494 B C 510 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B G 11 N2 ? ? ? 1_555 B C 27 O2 ? ? B G 494 B C 510 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B G 11 O6 ? ? ? 1_555 B C 27 N4 ? ? B G 494 B C 510 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B C 12 N3 ? ? ? 1_555 B G 26 N1 ? ? B C 495 B G 509 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B C 12 N4 ? ? ? 1_555 B G 26 O6 ? ? B C 495 B G 509 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B C 12 O2 ? ? ? 1_555 B G 26 N2 ? ? B C 495 B G 509 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B G 13 N1 ? ? ? 1_555 B C 25 N3 ? ? B G 496 B C 508 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B G 13 N2 ? ? ? 1_555 B C 25 O2 ? ? B G 496 B C 508 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B G 13 O6 ? ? ? 1_555 B C 25 N4 ? ? B G 496 B C 508 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B U 14 N3 ? ? ? 1_555 B G 24 O6 ? ? B U 497 B G 507 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog37 hydrog ? ? B U 14 O2 ? ? ? 1_555 B G 24 N1 ? ? B U 497 B G 507 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog38 hydrog ? ? B U 16 N3 ? ? ? 1_555 B A 23 N1 ? ? B U 499 B A 506 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B U 16 O4 ? ? ? 1_555 B A 23 N6 ? ? B U 499 B A 506 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B G 17 N1 ? ? ? 1_555 B C 22 N3 ? ? B G 500 B C 505 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B G 17 N2 ? ? ? 1_555 B C 22 O2 ? ? B G 500 B C 505 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B G 17 O6 ? ? ? 1_555 B C 22 N4 ? ? B G 500 B C 505 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B G 18 N2 ? ? ? 1_555 B A 21 N7 ? ? B G 501 B A 504 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog44 hydrog ? ? B G 20 N2 ? ? ? 1_555 B U 56 O2 ? ? B G 503 B U 539 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog45 hydrog ? ? B A 30 N1 ? ? ? 1_555 B U 43 N3 ? ? B A 513 B U 526 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B A 30 N6 ? ? ? 1_555 B U 43 O4 ? ? B A 513 B U 526 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B G 31 N1 ? ? ? 1_555 B U 42 O2 ? ? B G 514 B U 525 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog48 hydrog ? ? B G 31 O6 ? ? ? 1_555 B U 42 N3 ? ? B G 514 B U 525 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog49 hydrog ? ? B U 32 N3 ? ? ? 1_555 B A 41 N1 ? ? B U 515 B A 524 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B U 32 O4 ? ? ? 1_555 B A 41 N6 ? ? B U 515 B A 524 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B U 33 N3 ? ? ? 1_555 B A 40 N1 ? ? B U 516 B A 523 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B U 33 O4 ? ? ? 1_555 B A 40 N6 ? ? B U 516 B A 523 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B C 34 N3 ? ? ? 1_555 B G 39 N1 ? ? B C 517 B G 522 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B C 34 N4 ? ? ? 1_555 B G 39 O6 ? ? B C 517 B G 522 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B C 34 O2 ? ? ? 1_555 B G 39 N2 ? ? B C 517 B G 522 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B U 35 O2 ? ? ? 1_555 B G 38 N1 ? ? B U 518 B G 521 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog57 hydrog ? ? B G 44 N1 ? ? ? 1_555 B C 52 N3 ? ? B G 527 B C 535 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B G 44 N2 ? ? ? 1_555 B C 52 O2 ? ? B G 527 B C 535 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? B G 44 O6 ? ? ? 1_555 B C 52 N4 ? ? B G 527 B C 535 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? B G 45 N1 ? ? ? 1_555 B C 51 N3 ? ? B G 528 B C 534 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? B G 45 N2 ? ? ? 1_555 B C 51 O2 ? ? B G 528 B C 534 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? B G 45 O6 ? ? ? 1_555 B C 51 N4 ? ? B G 528 B C 534 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? B G 46 N2 ? ? ? 1_555 B A 49 N7 ? ? B G 529 B A 532 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 47 ? ASN A 50 ? LYS A 51 ASN A 54 AA1 2 PHE A 32 ? ALA A 36 ? PHE A 36 ALA A 40 AA1 3 PHE A 21 ? ARG A 27 ? PHE A 25 ARG A 31 AA1 4 GLN A 8 ? ILE A 12 ? GLN A 12 ILE A 16 AA1 5 LEU A 54 ? ILE A 60 ? LEU A 58 ILE A 64 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LYS A 49 ? O LYS A 53 N VAL A 33 ? N VAL A 37 AA1 2 3 O TYR A 34 ? O TYR A 38 N ILE A 25 ? N ILE A 29 AA1 3 4 O ILE A 24 ? O ILE A 28 N GLN A 8 ? N GLN A 12 AA1 4 5 N ILE A 9 ? N ILE A 13 O HIS A 59 ? O HIS A 63 # _atom_sites.entry_id 7KKV _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.010106 _atom_sites.fract_transf_matrix[1][2] 0.005835 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011670 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005054 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 5 ? ? ? A . n A 1 2 PRO 2 6 6 PRO PRO A . n A 1 3 SER 3 7 7 SER SER A . n A 1 4 PRO 4 8 8 PRO PRO A . n A 1 5 GLU 5 9 9 GLU GLU A . n A 1 6 ILE 6 10 10 ILE ILE A . n A 1 7 GLY 7 11 11 GLY GLY A . n A 1 8 GLN 8 12 12 GLN GLN A . n A 1 9 ILE 9 13 13 ILE ILE A . n A 1 10 VAL 10 14 14 VAL VAL A . n A 1 11 LYS 11 15 15 LYS LYS A . n A 1 12 ILE 12 16 16 ILE ILE A . n A 1 13 VAL 13 17 17 VAL VAL A . n A 1 14 LYS 14 18 18 LYS LYS A . n A 1 15 GLY 15 19 19 GLY GLY A . n A 1 16 ARG 16 20 20 ARG ARG A . n A 1 17 ASP 17 21 21 ASP ASP A . n A 1 18 ARG 18 22 22 ARG ARG A . n A 1 19 ASP 19 23 23 ASP ASP A . n A 1 20 GLN 20 24 24 GLN GLN A . n A 1 21 PHE 21 25 25 PHE PHE A . n A 1 22 SER 22 26 26 SER SER A . n A 1 23 VAL 23 27 27 VAL VAL A . n A 1 24 ILE 24 28 28 ILE ILE A . n A 1 25 ILE 25 29 29 ILE ILE A . n A 1 26 LYS 26 30 30 LYS LYS A . n A 1 27 ARG 27 31 31 ARG ARG A . n A 1 28 VAL 28 32 32 VAL VAL A . n A 1 29 ASP 29 33 33 ASP ASP A . n A 1 30 ASP 30 34 34 ASP ASP A . n A 1 31 ARG 31 35 35 ARG ARG A . n A 1 32 PHE 32 36 36 PHE PHE A . n A 1 33 VAL 33 37 37 VAL VAL A . n A 1 34 TYR 34 38 38 TYR TYR A . n A 1 35 ILE 35 39 39 ILE ILE A . n A 1 36 ALA 36 40 40 ALA ALA A . n A 1 37 ASP 37 41 41 ASP ASP A . n A 1 38 GLY 38 42 42 GLY GLY A . n A 1 39 ASP 39 43 43 ASP ASP A . n A 1 40 LYS 40 44 44 LYS LYS A . n A 1 41 ARG 41 45 45 ARG ARG A . n A 1 42 LYS 42 46 46 LYS LYS A . n A 1 43 VAL 43 47 47 VAL VAL A . n A 1 44 ASP 44 48 48 ASP ASP A . n A 1 45 ARG 45 49 49 ARG ARG A . n A 1 46 ALA 46 50 50 ALA ALA A . n A 1 47 LYS 47 51 51 LYS LYS A . n A 1 48 ARG 48 52 52 ARG ARG A . n A 1 49 LYS 49 53 53 LYS LYS A . n A 1 50 ASN 50 54 54 ASN ASN A . n A 1 51 MET 51 55 55 MET MET A . n A 1 52 ASN 52 56 56 ASN ASN A . n A 1 53 HIS 53 57 57 HIS HIS A . n A 1 54 LEU 54 58 58 LEU LEU A . n A 1 55 LYS 55 59 59 LYS LYS A . n A 1 56 LEU 56 60 60 LEU LEU A . n A 1 57 ILE 57 61 61 ILE ILE A . n A 1 58 ASP 58 62 62 ASP ASP A . n A 1 59 HIS 59 63 63 HIS HIS A . n A 1 60 ILE 60 64 64 ILE ILE A . n A 1 61 SER 61 65 65 SER SER A . n A 1 62 PRO 62 66 66 PRO PRO A . n A 1 63 GLU 63 67 67 GLU GLU A . n A 1 64 VAL 64 68 68 VAL VAL A . n A 1 65 ARG 65 69 69 ARG ARG A . n A 1 66 HIS 66 70 70 HIS HIS A . n A 1 67 SER 67 71 71 SER SER A . n A 1 68 PHE 68 72 72 PHE PHE A . n A 1 69 GLU 69 73 73 GLU GLU A . n A 1 70 GLU 70 74 74 GLU GLU A . n A 1 71 THR 71 75 75 THR THR A . n A 1 72 GLY 72 76 76 GLY GLY A . n A 1 73 LYS 73 77 77 LYS LYS A . n A 1 74 VAL 74 78 78 VAL VAL A . n A 1 75 THR 75 79 79 THR THR A . n A 1 76 ASN 76 80 80 ASN ASN A . n A 1 77 GLY 77 81 81 GLY GLY A . n A 1 78 LYS 78 82 82 LYS LYS A . n A 1 79 LEU 79 83 83 LEU LEU A . n A 1 80 ARG 80 84 84 ARG ARG A . n A 1 81 PHE 81 85 85 PHE PHE A . n A 1 82 ALA 82 86 86 ALA ALA A . n A 1 83 LEU 83 87 87 LEU LEU A . n A 1 84 LYS 84 88 88 LYS LYS A . n A 1 85 LYS 85 89 89 LYS LYS A . n A 1 86 PHE 86 90 90 PHE PHE A . n A 1 87 LEU 87 91 91 LEU LEU A . n A 1 88 GLU 88 92 92 GLU GLU A . n A 1 89 GLU 89 93 93 GLU GLU A . n A 1 90 HIS 90 94 94 HIS HIS A . n A 1 91 ALA 91 95 ? ? ? A . n A 1 92 ASP 92 96 ? ? ? A . n A 1 93 LEU 93 97 ? ? ? A . n A 1 94 LEU 94 98 ? ? ? A . n A 1 95 LYS 95 99 ? ? ? A . n A 1 96 GLU 96 100 ? ? ? A . n A 1 97 GLY 97 101 ? ? ? A . n A 1 98 GLU 98 102 ? ? ? A . n B 2 1 GTP 1 484 484 GTP GTP B . n B 2 2 G 2 485 485 G G B . n B 2 3 C 3 486 486 C C B . n B 2 4 C 4 487 487 C C B . n B 2 5 A 5 488 488 A A B . n B 2 6 G 6 489 489 G G B . n B 2 7 U 7 490 490 U U B . n B 2 8 C 8 491 491 C C B . n B 2 9 U 9 492 492 U U B . n B 2 10 G 10 493 493 G G B . n B 2 11 G 11 494 494 G G B . n B 2 12 C 12 495 495 C C B . n B 2 13 G 13 496 496 G G B . n B 2 14 U 14 497 497 U U B . n B 2 15 U 15 498 498 U U B . n B 2 16 U 16 499 499 U U B . n B 2 17 G 17 500 500 G G B . n B 2 18 G 18 501 501 G G B . n B 2 19 U 19 502 502 U U B . n B 2 20 G 20 503 503 G G B . n B 2 21 A 21 504 504 A A B . n B 2 22 C 22 505 505 C C B . n B 2 23 A 23 506 506 A A B . n B 2 24 G 24 507 507 G G B . n B 2 25 C 25 508 508 C C B . n B 2 26 G 26 509 509 G G B . n B 2 27 C 27 510 510 C C B . n B 2 28 C 28 511 511 C C B . n B 2 29 A 29 512 512 A A B . n B 2 30 A 30 513 513 A A B . n B 2 31 G 31 514 514 G G B . n B 2 32 U 32 515 515 U U B . n B 2 33 U 33 516 516 U U B . n B 2 34 C 34 517 517 C C B . n B 2 35 U 35 518 518 U U B . n B 2 36 U 36 519 519 U U B . n B 2 37 C 37 520 520 C C B . n B 2 38 G 38 521 521 G G B . n B 2 39 G 39 522 522 G G B . n B 2 40 A 40 523 523 A A B . n B 2 41 A 41 524 524 A A B . n B 2 42 U 42 525 525 U U B . n B 2 43 U 43 526 526 U U B . n B 2 44 G 44 527 527 G G B . n B 2 45 G 45 528 528 G G B . n B 2 46 G 46 529 529 G G B . n B 2 47 A 47 530 530 A A B . n B 2 48 A 48 531 531 A A B . n B 2 49 A 49 532 532 A A B . n B 2 50 U 50 533 533 U U B . n B 2 51 C 51 534 534 C C B . n B 2 52 C 52 535 535 C C B . n B 2 53 U 53 536 536 U U B . n B 2 54 A 54 537 537 A A B . n B 2 55 C 55 538 538 C C B . n B 2 56 U 56 539 539 U U B . n B 2 57 G 57 540 540 G G B . n B 2 58 G 58 541 541 G G B . n B 2 59 C 59 542 542 C C B . n B 2 60 C 60 543 543 C C B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MPD 1 201 3 MPD MPD A . D 4 EPE 1 601 1 EPE EPE B . E 5 MG 1 602 101 MG MG B . F 5 MG 1 603 103 MG MG B . G 6 HOH 1 301 193 HOH HOH A . G 6 HOH 2 302 135 HOH HOH A . G 6 HOH 3 303 237 HOH HOH A . G 6 HOH 4 304 196 HOH HOH A . G 6 HOH 5 305 117 HOH HOH A . G 6 HOH 6 306 167 HOH HOH A . G 6 HOH 7 307 269 HOH HOH A . G 6 HOH 8 308 137 HOH HOH A . G 6 HOH 9 309 35 HOH HOH A . G 6 HOH 10 310 191 HOH HOH A . G 6 HOH 11 311 33 HOH HOH A . G 6 HOH 12 312 270 HOH HOH A . G 6 HOH 13 313 51 HOH HOH A . G 6 HOH 14 314 125 HOH HOH A . G 6 HOH 15 315 192 HOH HOH A . G 6 HOH 16 316 250 HOH HOH A . G 6 HOH 17 317 154 HOH HOH A . G 6 HOH 18 318 123 HOH HOH A . G 6 HOH 19 319 9 HOH HOH A . G 6 HOH 20 320 271 HOH HOH A . G 6 HOH 21 321 198 HOH HOH A . G 6 HOH 22 322 14 HOH HOH A . G 6 HOH 23 323 111 HOH HOH A . G 6 HOH 24 324 81 HOH HOH A . G 6 HOH 25 325 84 HOH HOH A . G 6 HOH 26 326 6 HOH HOH A . G 6 HOH 27 327 52 HOH HOH A . G 6 HOH 28 328 166 HOH HOH A . G 6 HOH 29 329 140 HOH HOH A . G 6 HOH 30 330 200 HOH HOH A . G 6 HOH 31 331 138 HOH HOH A . G 6 HOH 32 332 3 HOH HOH A . G 6 HOH 33 333 164 HOH HOH A . G 6 HOH 34 334 155 HOH HOH A . G 6 HOH 35 335 139 HOH HOH A . G 6 HOH 36 336 112 HOH HOH A . G 6 HOH 37 337 272 HOH HOH A . G 6 HOH 38 338 13 HOH HOH A . G 6 HOH 39 339 136 HOH HOH A . G 6 HOH 40 340 16 HOH HOH A . G 6 HOH 41 341 7 HOH HOH A . G 6 HOH 42 342 18 HOH HOH A . G 6 HOH 43 343 134 HOH HOH A . G 6 HOH 44 344 173 HOH HOH A . G 6 HOH 45 345 194 HOH HOH A . G 6 HOH 46 346 281 HOH HOH A . G 6 HOH 47 347 199 HOH HOH A . G 6 HOH 48 348 116 HOH HOH A . G 6 HOH 49 349 238 HOH HOH A . G 6 HOH 50 350 251 HOH HOH A . G 6 HOH 51 351 266 HOH HOH A . G 6 HOH 52 352 197 HOH HOH A . G 6 HOH 53 353 168 HOH HOH A . G 6 HOH 54 354 187 HOH HOH A . G 6 HOH 55 355 201 HOH HOH A . G 6 HOH 56 356 195 HOH HOH A . G 6 HOH 57 357 126 HOH HOH A . G 6 HOH 58 358 107 HOH HOH A . H 6 HOH 1 701 97 HOH HOH B . H 6 HOH 2 702 183 HOH HOH B . H 6 HOH 3 703 261 HOH HOH B . H 6 HOH 4 704 75 HOH HOH B . H 6 HOH 5 705 22 HOH HOH B . H 6 HOH 6 706 88 HOH HOH B . H 6 HOH 7 707 189 HOH HOH B . H 6 HOH 8 708 132 HOH HOH B . H 6 HOH 9 709 4 HOH HOH B . H 6 HOH 10 710 25 HOH HOH B . H 6 HOH 11 711 212 HOH HOH B . H 6 HOH 12 712 101 HOH HOH B . H 6 HOH 13 713 30 HOH HOH B . H 6 HOH 14 714 174 HOH HOH B . H 6 HOH 15 715 214 HOH HOH B . H 6 HOH 16 716 27 HOH HOH B . H 6 HOH 17 717 92 HOH HOH B . H 6 HOH 18 718 128 HOH HOH B . H 6 HOH 19 719 108 HOH HOH B . H 6 HOH 20 720 188 HOH HOH B . H 6 HOH 21 721 96 HOH HOH B . H 6 HOH 22 722 165 HOH HOH B . H 6 HOH 23 723 160 HOH HOH B . H 6 HOH 24 724 249 HOH HOH B . H 6 HOH 25 725 234 HOH HOH B . H 6 HOH 26 726 20 HOH HOH B . H 6 HOH 27 727 113 HOH HOH B . H 6 HOH 28 728 268 HOH HOH B . H 6 HOH 29 729 182 HOH HOH B . H 6 HOH 30 730 17 HOH HOH B . H 6 HOH 31 731 240 HOH HOH B . H 6 HOH 32 732 39 HOH HOH B . H 6 HOH 33 733 60 HOH HOH B . H 6 HOH 34 734 279 HOH HOH B . H 6 HOH 35 735 43 HOH HOH B . H 6 HOH 36 736 202 HOH HOH B . H 6 HOH 37 737 171 HOH HOH B . H 6 HOH 38 738 157 HOH HOH B . H 6 HOH 39 739 129 HOH HOH B . H 6 HOH 40 740 169 HOH HOH B . H 6 HOH 41 741 38 HOH HOH B . H 6 HOH 42 742 12 HOH HOH B . H 6 HOH 43 743 41 HOH HOH B . H 6 HOH 44 744 267 HOH HOH B . H 6 HOH 45 745 143 HOH HOH B . H 6 HOH 46 746 74 HOH HOH B . H 6 HOH 47 747 47 HOH HOH B . H 6 HOH 48 748 131 HOH HOH B . H 6 HOH 49 749 179 HOH HOH B . H 6 HOH 50 750 54 HOH HOH B . H 6 HOH 51 751 115 HOH HOH B . H 6 HOH 52 752 184 HOH HOH B . H 6 HOH 53 753 245 HOH HOH B . H 6 HOH 54 754 259 HOH HOH B . H 6 HOH 55 755 67 HOH HOH B . H 6 HOH 56 756 204 HOH HOH B . H 6 HOH 57 757 62 HOH HOH B . H 6 HOH 58 758 87 HOH HOH B . H 6 HOH 59 759 130 HOH HOH B . H 6 HOH 60 760 232 HOH HOH B . H 6 HOH 61 761 181 HOH HOH B . H 6 HOH 62 762 215 HOH HOH B . H 6 HOH 63 763 26 HOH HOH B . H 6 HOH 64 764 48 HOH HOH B . H 6 HOH 65 765 28 HOH HOH B . H 6 HOH 66 766 29 HOH HOH B . H 6 HOH 67 767 105 HOH HOH B . H 6 HOH 68 768 120 HOH HOH B . H 6 HOH 69 769 82 HOH HOH B . H 6 HOH 70 770 50 HOH HOH B . H 6 HOH 71 771 152 HOH HOH B . H 6 HOH 72 772 55 HOH HOH B . H 6 HOH 73 773 190 HOH HOH B . H 6 HOH 74 774 147 HOH HOH B . H 6 HOH 75 775 219 HOH HOH B . H 6 HOH 76 776 46 HOH HOH B . H 6 HOH 77 777 79 HOH HOH B . H 6 HOH 78 778 61 HOH HOH B . H 6 HOH 79 779 221 HOH HOH B . H 6 HOH 80 780 2 HOH HOH B . H 6 HOH 81 781 72 HOH HOH B . H 6 HOH 82 782 265 HOH HOH B . H 6 HOH 83 783 44 HOH HOH B . H 6 HOH 84 784 21 HOH HOH B . H 6 HOH 85 785 133 HOH HOH B . H 6 HOH 86 786 83 HOH HOH B . H 6 HOH 87 787 34 HOH HOH B . H 6 HOH 88 788 118 HOH HOH B . H 6 HOH 89 789 176 HOH HOH B . H 6 HOH 90 790 32 HOH HOH B . H 6 HOH 91 791 213 HOH HOH B . H 6 HOH 92 792 230 HOH HOH B . H 6 HOH 93 793 19 HOH HOH B . H 6 HOH 94 794 231 HOH HOH B . H 6 HOH 95 795 98 HOH HOH B . H 6 HOH 96 796 100 HOH HOH B . H 6 HOH 97 797 226 HOH HOH B . H 6 HOH 98 798 177 HOH HOH B . H 6 HOH 99 799 252 HOH HOH B . H 6 HOH 100 800 276 HOH HOH B . H 6 HOH 101 801 5 HOH HOH B . H 6 HOH 102 802 223 HOH HOH B . H 6 HOH 103 803 274 HOH HOH B . H 6 HOH 104 804 150 HOH HOH B . H 6 HOH 105 805 85 HOH HOH B . H 6 HOH 106 806 217 HOH HOH B . H 6 HOH 107 807 229 HOH HOH B . H 6 HOH 108 808 56 HOH HOH B . H 6 HOH 109 809 69 HOH HOH B . H 6 HOH 110 810 277 HOH HOH B . H 6 HOH 111 811 127 HOH HOH B . H 6 HOH 112 812 178 HOH HOH B . H 6 HOH 113 813 86 HOH HOH B . H 6 HOH 114 814 36 HOH HOH B . H 6 HOH 115 815 57 HOH HOH B . H 6 HOH 116 816 37 HOH HOH B . H 6 HOH 117 817 210 HOH HOH B . H 6 HOH 118 818 63 HOH HOH B . H 6 HOH 119 819 99 HOH HOH B . H 6 HOH 120 820 78 HOH HOH B . H 6 HOH 121 821 109 HOH HOH B . H 6 HOH 122 822 15 HOH HOH B . H 6 HOH 123 823 260 HOH HOH B . H 6 HOH 124 824 8 HOH HOH B . H 6 HOH 125 825 65 HOH HOH B . H 6 HOH 126 826 94 HOH HOH B . H 6 HOH 127 827 156 HOH HOH B . H 6 HOH 128 828 114 HOH HOH B . H 6 HOH 129 829 242 HOH HOH B . H 6 HOH 130 830 258 HOH HOH B . H 6 HOH 131 831 222 HOH HOH B . H 6 HOH 132 832 203 HOH HOH B . H 6 HOH 133 833 80 HOH HOH B . H 6 HOH 134 834 216 HOH HOH B . H 6 HOH 135 835 144 HOH HOH B . H 6 HOH 136 836 233 HOH HOH B . H 6 HOH 137 837 244 HOH HOH B . H 6 HOH 138 838 66 HOH HOH B . H 6 HOH 139 839 146 HOH HOH B . H 6 HOH 140 840 122 HOH HOH B . H 6 HOH 141 841 153 HOH HOH B . H 6 HOH 142 842 10 HOH HOH B . H 6 HOH 143 843 90 HOH HOH B . H 6 HOH 144 844 162 HOH HOH B . H 6 HOH 145 845 59 HOH HOH B . H 6 HOH 146 846 186 HOH HOH B . H 6 HOH 147 847 235 HOH HOH B . H 6 HOH 148 848 49 HOH HOH B . H 6 HOH 149 849 236 HOH HOH B . H 6 HOH 150 850 148 HOH HOH B . H 6 HOH 151 851 159 HOH HOH B . H 6 HOH 152 852 220 HOH HOH B . H 6 HOH 153 853 211 HOH HOH B . H 6 HOH 154 854 95 HOH HOH B . H 6 HOH 155 855 106 HOH HOH B . H 6 HOH 156 856 68 HOH HOH B . H 6 HOH 157 857 163 HOH HOH B . H 6 HOH 158 858 110 HOH HOH B . H 6 HOH 159 859 239 HOH HOH B . H 6 HOH 160 860 227 HOH HOH B . H 6 HOH 161 861 1 HOH HOH B . H 6 HOH 162 862 180 HOH HOH B . H 6 HOH 163 863 158 HOH HOH B . H 6 HOH 164 864 70 HOH HOH B . H 6 HOH 165 865 71 HOH HOH B . H 6 HOH 166 866 89 HOH HOH B . H 6 HOH 167 867 141 HOH HOH B . H 6 HOH 168 868 218 HOH HOH B . H 6 HOH 169 869 103 HOH HOH B . H 6 HOH 170 870 247 HOH HOH B . H 6 HOH 171 871 209 HOH HOH B . H 6 HOH 172 872 91 HOH HOH B . H 6 HOH 173 873 93 HOH HOH B . H 6 HOH 174 874 77 HOH HOH B . H 6 HOH 175 875 243 HOH HOH B . H 6 HOH 176 876 241 HOH HOH B . H 6 HOH 177 877 185 HOH HOH B . H 6 HOH 178 878 246 HOH HOH B . H 6 HOH 179 879 151 HOH HOH B . H 6 HOH 180 880 205 HOH HOH B . H 6 HOH 181 881 257 HOH HOH B . H 6 HOH 182 882 145 HOH HOH B . H 6 HOH 183 883 45 HOH HOH B . H 6 HOH 184 884 161 HOH HOH B . H 6 HOH 185 885 172 HOH HOH B . H 6 HOH 186 886 170 HOH HOH B . H 6 HOH 187 887 58 HOH HOH B . H 6 HOH 188 888 224 HOH HOH B . H 6 HOH 189 889 262 HOH HOH B . H 6 HOH 190 890 248 HOH HOH B . H 6 HOH 191 891 104 HOH HOH B . H 6 HOH 192 892 256 HOH HOH B . H 6 HOH 193 893 206 HOH HOH B . H 6 HOH 194 894 121 HOH HOH B . H 6 HOH 195 895 149 HOH HOH B . H 6 HOH 196 896 119 HOH HOH B . H 6 HOH 197 897 40 HOH HOH B . H 6 HOH 198 898 255 HOH HOH B . H 6 HOH 199 899 254 HOH HOH B . H 6 HOH 200 900 73 HOH HOH B . H 6 HOH 201 901 64 HOH HOH B . H 6 HOH 202 902 278 HOH HOH B . H 6 HOH 203 903 42 HOH HOH B . H 6 HOH 204 904 273 HOH HOH B . H 6 HOH 205 905 53 HOH HOH B . H 6 HOH 206 906 225 HOH HOH B . H 6 HOH 207 907 228 HOH HOH B . H 6 HOH 208 908 263 HOH HOH B . H 6 HOH 209 909 280 HOH HOH B . H 6 HOH 210 910 102 HOH HOH B . H 6 HOH 211 911 253 HOH HOH B . H 6 HOH 212 912 11 HOH HOH B . H 6 HOH 213 913 142 HOH HOH B . H 6 HOH 214 914 76 HOH HOH B . H 6 HOH 215 915 175 HOH HOH B . H 6 HOH 216 916 264 HOH HOH B . H 6 HOH 217 917 124 HOH HOH B . H 6 HOH 218 918 275 HOH HOH B . H 6 HOH 219 919 207 HOH HOH B . H 6 HOH 220 920 208 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2660 ? 1 MORE -27 ? 1 'SSA (A^2)' 14510 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 357 ? G HOH . 2 1 B HOH 861 ? H HOH . 3 1 B HOH 903 ? H HOH . 4 1 B HOH 917 ? H HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? B U 9 ? B U 492 ? 1_555 MG ? F MG . ? B MG 603 ? 1_555 OP1 ? B A 23 ? B A 506 ? 1_555 80.7 ? 2 OP1 ? B U 9 ? B U 492 ? 1_555 MG ? F MG . ? B MG 603 ? 1_555 O ? H HOH . ? B HOH 725 ? 1_555 73.6 ? 3 OP1 ? B A 23 ? B A 506 ? 1_555 MG ? F MG . ? B MG 603 ? 1_555 O ? H HOH . ? B HOH 725 ? 1_555 70.8 ? 4 OP1 ? B U 9 ? B U 492 ? 1_555 MG ? F MG . ? B MG 603 ? 1_555 O ? H HOH . ? B HOH 737 ? 1_555 163.7 ? 5 OP1 ? B A 23 ? B A 506 ? 1_555 MG ? F MG . ? B MG 603 ? 1_555 O ? H HOH . ? B HOH 737 ? 1_555 88.7 ? 6 O ? H HOH . ? B HOH 725 ? 1_555 MG ? F MG . ? B MG 603 ? 1_555 O ? H HOH . ? B HOH 737 ? 1_555 91.2 ? 7 OP1 ? B U 9 ? B U 492 ? 1_555 MG ? F MG . ? B MG 603 ? 1_555 O ? H HOH . ? B HOH 847 ? 1_555 107.1 ? 8 OP1 ? B A 23 ? B A 506 ? 1_555 MG ? F MG . ? B MG 603 ? 1_555 O ? H HOH . ? B HOH 847 ? 1_555 86.4 ? 9 O ? H HOH . ? B HOH 725 ? 1_555 MG ? F MG . ? B MG 603 ? 1_555 O ? H HOH . ? B HOH 847 ? 1_555 156.9 ? 10 O ? H HOH . ? B HOH 737 ? 1_555 MG ? F MG . ? B MG 603 ? 1_555 O ? H HOH . ? B HOH 847 ? 1_555 84.4 ? 11 OP1 ? B U 9 ? B U 492 ? 1_555 MG ? F MG . ? B MG 603 ? 1_555 O ? H HOH . ? B HOH 896 ? 1_555 109.5 ? 12 OP1 ? B A 23 ? B A 506 ? 1_555 MG ? F MG . ? B MG 603 ? 1_555 O ? H HOH . ? B HOH 896 ? 1_555 169.9 ? 13 O ? H HOH . ? B HOH 725 ? 1_555 MG ? F MG . ? B MG 603 ? 1_555 O ? H HOH . ? B HOH 896 ? 1_555 111.1 ? 14 O ? H HOH . ? B HOH 737 ? 1_555 MG ? F MG . ? B MG 603 ? 1_555 O ? H HOH . ? B HOH 896 ? 1_555 81.3 ? 15 O ? H HOH . ? B HOH 847 ? 1_555 MG ? F MG . ? B MG 603 ? 1_555 O ? H HOH . ? B HOH 896 ? 1_555 90.7 ? 16 O ? H HOH . ? B HOH 734 ? 1_555 MG ? E MG . ? B MG 602 ? 1_555 O ? H HOH . ? B HOH 800 ? 1_555 93.6 ? 17 O ? H HOH . ? B HOH 734 ? 1_555 MG ? E MG . ? B MG 602 ? 1_555 O ? H HOH . ? B HOH 810 ? 1_555 88.6 ? 18 O ? H HOH . ? B HOH 800 ? 1_555 MG ? E MG . ? B MG 602 ? 1_555 O ? H HOH . ? B HOH 810 ? 1_555 94.3 ? 19 O ? H HOH . ? B HOH 734 ? 1_555 MG ? E MG . ? B MG 602 ? 1_555 O ? H HOH . ? B HOH 902 ? 6_556 99.0 ? 20 O ? H HOH . ? B HOH 800 ? 1_555 MG ? E MG . ? B MG 602 ? 1_555 O ? H HOH . ? B HOH 902 ? 6_556 85.4 ? 21 O ? H HOH . ? B HOH 810 ? 1_555 MG ? E MG . ? B MG 602 ? 1_555 O ? H HOH . ? B HOH 902 ? 6_556 172.4 ? 22 O ? H HOH . ? B HOH 734 ? 1_555 MG ? E MG . ? B MG 602 ? 1_555 O ? H HOH . ? B HOH 909 ? 6_556 173.1 ? 23 O ? H HOH . ? B HOH 800 ? 1_555 MG ? E MG . ? B MG 602 ? 1_555 O ? H HOH . ? B HOH 909 ? 6_556 84.0 ? 24 O ? H HOH . ? B HOH 810 ? 1_555 MG ? E MG . ? B MG 602 ? 1_555 O ? H HOH . ? B HOH 909 ? 6_556 98.0 ? 25 O ? H HOH . ? B HOH 902 ? 6_556 MG ? E MG . ? B MG 602 ? 1_555 O ? H HOH . ? B HOH 909 ? 6_556 74.4 ? 26 O ? H HOH . ? B HOH 734 ? 1_555 MG ? E MG . ? B MG 602 ? 1_555 O ? H HOH . ? B HOH 918 ? 1_555 87.2 ? 27 O ? H HOH . ? B HOH 800 ? 1_555 MG ? E MG . ? B MG 602 ? 1_555 O ? H HOH . ? B HOH 918 ? 1_555 175.4 ? 28 O ? H HOH . ? B HOH 810 ? 1_555 MG ? E MG . ? B MG 602 ? 1_555 O ? H HOH . ? B HOH 918 ? 1_555 81.2 ? 29 O ? H HOH . ? B HOH 902 ? 6_556 MG ? E MG . ? B MG 602 ? 1_555 O ? H HOH . ? B HOH 918 ? 1_555 98.9 ? 30 O ? H HOH . ? B HOH 909 ? 6_556 MG ? E MG . ? B MG 602 ? 1_555 O ? H HOH . ? B HOH 918 ? 1_555 95.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-03-03 2 'Structure model' 1 1 2021-03-10 3 'Structure model' 1 2 2023-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.pdbx_database_id_DOI' 3 2 'Structure model' '_citation.pdbx_database_id_PubMed' 4 2 'Structure model' '_citation.title' 5 2 'Structure model' '_citation_author.identifier_ORCID' 6 3 'Structure model' '_database_2.pdbx_DOI' 7 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -9.2278 33.9047 121.1426 0.5741 ? -0.0063 ? 0.0970 ? 0.8654 ? 0.0600 ? 0.6667 ? 2.1929 ? -0.7758 ? 1.5140 ? 7.6135 ? -0.8153 ? 7.4624 ? 0.3051 ? -1.3417 ? -0.2433 ? 0.4892 ? 0.1703 ? 1.1635 ? 0.5097 ? -1.6069 ? -0.8540 ? 2 'X-RAY DIFFRACTION' ? refined -1.8148 30.6022 108.6724 0.7195 ? 0.2006 ? -0.0293 ? 0.6088 ? -0.0373 ? 0.5978 ? 5.7082 ? 1.2727 ? -0.0854 ? 3.9501 ? -1.2124 ? 4.0806 ? 0.1775 ? 0.6374 ? -0.2117 ? -0.7590 ? 0.1239 ? -0.3126 ? 1.5129 ? 0.3744 ? -0.1273 ? 3 'X-RAY DIFFRACTION' ? refined -2.0425 39.1537 118.7079 0.5978 ? 0.1677 ? 0.0863 ? 0.6285 ? 0.0119 ? 0.5416 ? 4.4825 ? 1.2848 ? 1.3303 ? 3.6351 ? -0.5344 ? 4.4011 ? 0.3515 ? 0.0726 ? 0.6679 ? 0.3373 ? -0.2946 ? -0.0677 ? -0.2445 ? -0.1629 ? -0.0221 ? 4 'X-RAY DIFFRACTION' ? refined -8.6076 34.8552 116.9352 0.4904 ? 0.1000 ? 0.1133 ? 0.6520 ? 0.0523 ? 0.5997 ? 3.6825 ? 0.6141 ? 1.4943 ? 2.2809 ? -0.9866 ? 4.9149 ? 0.0222 ? 0.0491 ? 0.2303 ? 0.0560 ? 0.1344 ? 0.5788 ? 0.3755 ? -0.9647 ? -0.2209 ? 5 'X-RAY DIFFRACTION' ? refined -1.0558 37.7808 133.0261 0.9581 ? 0.0690 ? 0.1195 ? 1.0076 ? -0.0351 ? 0.6683 ? 3.1843 ? 1.6592 ? 1.9188 ? 7.3693 ? 0.7807 ? 4.2967 ? 0.2088 ? -1.6557 ? 0.7660 ? 1.6143 ? -0.1158 ? 0.7914 ? 0.1058 ? -0.4891 ? -0.0617 ? 6 'X-RAY DIFFRACTION' ? refined 0.4052 25.4692 126.5985 0.9495 ? 0.0574 ? -0.0577 ? 0.6703 ? 0.1118 ? 0.7701 ? 6.1046 ? 0.2260 ? 2.2897 ? 8.0928 ? 1.9811 ? 7.4618 ? 0.7103 ? -1.1059 ? -0.5975 ? 1.2528 ? -0.2756 ? 0.4956 ? 1.7054 ? -0.1973 ? -0.3570 ? 7 'X-RAY DIFFRACTION' ? refined 0.2303 37.1409 98.6491 0.4652 ? 0.1107 ? 0.0962 ? 0.7697 ? 0.0777 ? 0.6243 ? 2.9882 ? -1.0261 ? 0.2912 ? 1.2553 ? 0.1943 ? 0.0882 ? -0.0947 ? 0.5244 ? 0.2561 ? 0.0565 ? 0.1242 ? -0.0536 ? 0.0748 ? -0.0987 ? -0.0697 ? 8 'X-RAY DIFFRACTION' ? refined 13.4066 32.3159 77.6210 0.6817 ? 0.1941 ? 0.0949 ? 1.0226 ? 0.0628 ? 0.6144 ? 1.9738 ? 0.0770 ? -1.3528 ? 0.6054 ? -0.9271 ? 2.1158 ? 0.3010 ? 0.9850 ? 0.4363 ? -0.1309 ? 0.1428 ? 0.1166 ? -0.2187 ? -1.0160 ? -0.3977 ? 9 'X-RAY DIFFRACTION' ? refined -1.6162 38.9105 81.9597 1.0021 ? 0.3445 ? 0.2689 ? 1.6026 ? 0.2164 ? 0.7747 ? 4.5576 ? -2.3238 ? -1.6064 ? 3.8121 ? -1.0295 ? 2.4400 ? 0.4997 ? 1.7662 ? 0.8795 ? -1.0185 ? 0.0114 ? -0.0151 ? -0.2933 ? -0.9412 ? -0.6552 ? 10 'X-RAY DIFFRACTION' ? refined -8.6889 49.0641 78.9736 1.5916 ? 0.2443 ? 0.3379 ? 2.6286 ? 0.7945 ? 1.5794 ? 6.4059 ? 0.3286 ? -2.2968 ? 0.4898 ? 0.5426 ? 1.7468 ? -0.7668 ? 2.2694 ? 1.7727 ? -2.3176 ? 0.9191 ? -0.1259 ? -0.5367 ? 1.7843 ? -0.0620 ? 11 'X-RAY DIFFRACTION' ? refined -12.8369 38.9873 91.2233 0.5400 ? 0.1606 ? 0.0509 ? 1.0285 ? 0.0933 ? 0.7017 ? 2.8944 ? 1.1668 ? 0.8391 ? 1.6644 ? 0.7300 ? 4.4303 ? 0.4454 ? 1.2211 ? 0.4046 ? -0.3179 ? -0.0810 ? 0.2941 ? 0.1087 ? -0.5042 ? 0.0751 ? 12 'X-RAY DIFFRACTION' ? refined -16.2321 47.0114 104.4675 0.4391 ? 0.1080 ? 0.0588 ? 0.8260 ? 0.0419 ? 0.7884 ? 2.3336 ? 1.1003 ? 1.4431 ? 1.5362 ? -0.3319 ? 2.1794 ? -0.4053 ? 0.4322 ? 1.0558 ? 0.4326 ? 0.1548 ? 0.7034 ? -0.0771 ? -0.3571 ? 0.2118 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 6 ? ? ? A 16 ? ? ;chain 'A' and (resid 6 through 16 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? A 17 ? ? ? A 24 ? ? ;chain 'A' and (resid 17 through 24 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? A 25 ? ? ? A 50 ? ? ;chain 'A' and (resid 25 through 50 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? A 51 ? ? ? A 65 ? ? ;chain 'A' and (resid 51 through 65 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? A 66 ? ? ? A 79 ? ? ;chain 'A' and (resid 66 through 79 ) ; 6 'X-RAY DIFFRACTION' 6 ? ? A 80 ? ? ? A 94 ? ? ;chain 'A' and (resid 80 through 94 ) ; 7 'X-RAY DIFFRACTION' 7 ? ? B 485 ? ? ? B 509 ? ? ;chain 'B' and (resid 485 through 509 ) ; 8 'X-RAY DIFFRACTION' 8 ? ? B 510 ? ? ? B 524 ? ? ;chain 'B' and (resid 510 through 524 ) ; 9 'X-RAY DIFFRACTION' 9 ? ? B 525 ? ? ? B 529 ? ? ;chain 'B' and (resid 525 through 529 ) ; 10 'X-RAY DIFFRACTION' 10 ? ? B 530 ? ? ? B 534 ? ? ;chain 'B' and (resid 530 through 534 ) ; 11 'X-RAY DIFFRACTION' 11 ? ? B 535 ? ? ? B 539 ? ? ;chain 'B' and (resid 535 through 539 ) ; 12 'X-RAY DIFFRACTION' 12 ? ? B 540 ? ? ? B 543 ? ? ;chain 'B' and (resid 540 through 543 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.5.32 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.16_3549 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.16_3549 5 # _pdbx_entry_details.entry_id 7KKV _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 43 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -126.10 _pdbx_validate_torsion.psi -90.42 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 5 ? A GLY 1 2 1 Y 1 A ALA 95 ? A ALA 91 3 1 Y 1 A ASP 96 ? A ASP 92 4 1 Y 1 A LEU 97 ? A LEU 93 5 1 Y 1 A LEU 98 ? A LEU 94 6 1 Y 1 A LYS 99 ? A LYS 95 7 1 Y 1 A GLU 100 ? A GLU 96 8 1 Y 1 A GLY 101 ? A GLY 97 9 1 Y 1 A GLU 102 ? A GLU 98 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 EPE N1 N N N 146 EPE C2 C N N 147 EPE C3 C N N 148 EPE N4 N N N 149 EPE C5 C N N 150 EPE C6 C N N 151 EPE C7 C N N 152 EPE C8 C N N 153 EPE O8 O N N 154 EPE C9 C N N 155 EPE C10 C N N 156 EPE S S N N 157 EPE O1S O N N 158 EPE O2S O N N 159 EPE O3S O N N 160 EPE H21 H N N 161 EPE H22 H N N 162 EPE H31 H N N 163 EPE H32 H N N 164 EPE H51 H N N 165 EPE H52 H N N 166 EPE H61 H N N 167 EPE H62 H N N 168 EPE H71 H N N 169 EPE H72 H N N 170 EPE H81 H N N 171 EPE H82 H N N 172 EPE HO8 H N N 173 EPE H91 H N N 174 EPE H92 H N N 175 EPE H101 H N N 176 EPE H102 H N N 177 EPE HOS3 H N N 178 G OP3 O N N 179 G P P N N 180 G OP1 O N N 181 G OP2 O N N 182 G "O5'" O N N 183 G "C5'" C N N 184 G "C4'" C N R 185 G "O4'" O N N 186 G "C3'" C N S 187 G "O3'" O N N 188 G "C2'" C N R 189 G "O2'" O N N 190 G "C1'" C N R 191 G N9 N Y N 192 G C8 C Y N 193 G N7 N Y N 194 G C5 C Y N 195 G C6 C N N 196 G O6 O N N 197 G N1 N N N 198 G C2 C N N 199 G N2 N N N 200 G N3 N N N 201 G C4 C Y N 202 G HOP3 H N N 203 G HOP2 H N N 204 G "H5'" H N N 205 G "H5''" H N N 206 G "H4'" H N N 207 G "H3'" H N N 208 G "HO3'" H N N 209 G "H2'" H N N 210 G "HO2'" H N N 211 G "H1'" H N N 212 G H8 H N N 213 G H1 H N N 214 G H21 H N N 215 G H22 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 GTP PG P N N 266 GTP O1G O N N 267 GTP O2G O N N 268 GTP O3G O N N 269 GTP O3B O N N 270 GTP PB P N N 271 GTP O1B O N N 272 GTP O2B O N N 273 GTP O3A O N N 274 GTP PA P N N 275 GTP O1A O N N 276 GTP O2A O N N 277 GTP "O5'" O N N 278 GTP "C5'" C N N 279 GTP "C4'" C N R 280 GTP "O4'" O N N 281 GTP "C3'" C N S 282 GTP "O3'" O N N 283 GTP "C2'" C N R 284 GTP "O2'" O N N 285 GTP "C1'" C N R 286 GTP N9 N Y N 287 GTP C8 C Y N 288 GTP N7 N Y N 289 GTP C5 C Y N 290 GTP C6 C N N 291 GTP O6 O N N 292 GTP N1 N N N 293 GTP C2 C N N 294 GTP N2 N N N 295 GTP N3 N N N 296 GTP C4 C Y N 297 GTP HOG2 H N N 298 GTP HOG3 H N N 299 GTP HOB2 H N N 300 GTP HOA2 H N N 301 GTP "H5'" H N N 302 GTP "H5''" H N N 303 GTP "H4'" H N N 304 GTP "H3'" H N N 305 GTP "HO3'" H N N 306 GTP "H2'" H N N 307 GTP "HO2'" H N N 308 GTP "H1'" H N N 309 GTP H8 H N N 310 GTP HN1 H N N 311 GTP HN21 H N N 312 GTP HN22 H N N 313 HIS N N N N 314 HIS CA C N S 315 HIS C C N N 316 HIS O O N N 317 HIS CB C N N 318 HIS CG C Y N 319 HIS ND1 N Y N 320 HIS CD2 C Y N 321 HIS CE1 C Y N 322 HIS NE2 N Y N 323 HIS OXT O N N 324 HIS H H N N 325 HIS H2 H N N 326 HIS HA H N N 327 HIS HB2 H N N 328 HIS HB3 H N N 329 HIS HD1 H N N 330 HIS HD2 H N N 331 HIS HE1 H N N 332 HIS HE2 H N N 333 HIS HXT H N N 334 HOH O O N N 335 HOH H1 H N N 336 HOH H2 H N N 337 ILE N N N N 338 ILE CA C N S 339 ILE C C N N 340 ILE O O N N 341 ILE CB C N S 342 ILE CG1 C N N 343 ILE CG2 C N N 344 ILE CD1 C N N 345 ILE OXT O N N 346 ILE H H N N 347 ILE H2 H N N 348 ILE HA H N N 349 ILE HB H N N 350 ILE HG12 H N N 351 ILE HG13 H N N 352 ILE HG21 H N N 353 ILE HG22 H N N 354 ILE HG23 H N N 355 ILE HD11 H N N 356 ILE HD12 H N N 357 ILE HD13 H N N 358 ILE HXT H N N 359 LEU N N N N 360 LEU CA C N S 361 LEU C C N N 362 LEU O O N N 363 LEU CB C N N 364 LEU CG C N N 365 LEU CD1 C N N 366 LEU CD2 C N N 367 LEU OXT O N N 368 LEU H H N N 369 LEU H2 H N N 370 LEU HA H N N 371 LEU HB2 H N N 372 LEU HB3 H N N 373 LEU HG H N N 374 LEU HD11 H N N 375 LEU HD12 H N N 376 LEU HD13 H N N 377 LEU HD21 H N N 378 LEU HD22 H N N 379 LEU HD23 H N N 380 LEU HXT H N N 381 LYS N N N N 382 LYS CA C N S 383 LYS C C N N 384 LYS O O N N 385 LYS CB C N N 386 LYS CG C N N 387 LYS CD C N N 388 LYS CE C N N 389 LYS NZ N N N 390 LYS OXT O N N 391 LYS H H N N 392 LYS H2 H N N 393 LYS HA H N N 394 LYS HB2 H N N 395 LYS HB3 H N N 396 LYS HG2 H N N 397 LYS HG3 H N N 398 LYS HD2 H N N 399 LYS HD3 H N N 400 LYS HE2 H N N 401 LYS HE3 H N N 402 LYS HZ1 H N N 403 LYS HZ2 H N N 404 LYS HZ3 H N N 405 LYS HXT H N N 406 MET N N N N 407 MET CA C N S 408 MET C C N N 409 MET O O N N 410 MET CB C N N 411 MET CG C N N 412 MET SD S N N 413 MET CE C N N 414 MET OXT O N N 415 MET H H N N 416 MET H2 H N N 417 MET HA H N N 418 MET HB2 H N N 419 MET HB3 H N N 420 MET HG2 H N N 421 MET HG3 H N N 422 MET HE1 H N N 423 MET HE2 H N N 424 MET HE3 H N N 425 MET HXT H N N 426 MG MG MG N N 427 MPD C1 C N N 428 MPD C2 C N N 429 MPD O2 O N N 430 MPD CM C N N 431 MPD C3 C N N 432 MPD C4 C N S 433 MPD O4 O N N 434 MPD C5 C N N 435 MPD H11 H N N 436 MPD H12 H N N 437 MPD H13 H N N 438 MPD HO2 H N N 439 MPD HM1 H N N 440 MPD HM2 H N N 441 MPD HM3 H N N 442 MPD H31 H N N 443 MPD H32 H N N 444 MPD H4 H N N 445 MPD HO4 H N N 446 MPD H51 H N N 447 MPD H52 H N N 448 MPD H53 H N N 449 PHE N N N N 450 PHE CA C N S 451 PHE C C N N 452 PHE O O N N 453 PHE CB C N N 454 PHE CG C Y N 455 PHE CD1 C Y N 456 PHE CD2 C Y N 457 PHE CE1 C Y N 458 PHE CE2 C Y N 459 PHE CZ C Y N 460 PHE OXT O N N 461 PHE H H N N 462 PHE H2 H N N 463 PHE HA H N N 464 PHE HB2 H N N 465 PHE HB3 H N N 466 PHE HD1 H N N 467 PHE HD2 H N N 468 PHE HE1 H N N 469 PHE HE2 H N N 470 PHE HZ H N N 471 PHE HXT H N N 472 PRO N N N N 473 PRO CA C N S 474 PRO C C N N 475 PRO O O N N 476 PRO CB C N N 477 PRO CG C N N 478 PRO CD C N N 479 PRO OXT O N N 480 PRO H H N N 481 PRO HA H N N 482 PRO HB2 H N N 483 PRO HB3 H N N 484 PRO HG2 H N N 485 PRO HG3 H N N 486 PRO HD2 H N N 487 PRO HD3 H N N 488 PRO HXT H N N 489 SER N N N N 490 SER CA C N S 491 SER C C N N 492 SER O O N N 493 SER CB C N N 494 SER OG O N N 495 SER OXT O N N 496 SER H H N N 497 SER H2 H N N 498 SER HA H N N 499 SER HB2 H N N 500 SER HB3 H N N 501 SER HG H N N 502 SER HXT H N N 503 THR N N N N 504 THR CA C N S 505 THR C C N N 506 THR O O N N 507 THR CB C N R 508 THR OG1 O N N 509 THR CG2 C N N 510 THR OXT O N N 511 THR H H N N 512 THR H2 H N N 513 THR HA H N N 514 THR HB H N N 515 THR HG1 H N N 516 THR HG21 H N N 517 THR HG22 H N N 518 THR HG23 H N N 519 THR HXT H N N 520 TYR N N N N 521 TYR CA C N S 522 TYR C C N N 523 TYR O O N N 524 TYR CB C N N 525 TYR CG C Y N 526 TYR CD1 C Y N 527 TYR CD2 C Y N 528 TYR CE1 C Y N 529 TYR CE2 C Y N 530 TYR CZ C Y N 531 TYR OH O N N 532 TYR OXT O N N 533 TYR H H N N 534 TYR H2 H N N 535 TYR HA H N N 536 TYR HB2 H N N 537 TYR HB3 H N N 538 TYR HD1 H N N 539 TYR HD2 H N N 540 TYR HE1 H N N 541 TYR HE2 H N N 542 TYR HH H N N 543 TYR HXT H N N 544 U OP3 O N N 545 U P P N N 546 U OP1 O N N 547 U OP2 O N N 548 U "O5'" O N N 549 U "C5'" C N N 550 U "C4'" C N R 551 U "O4'" O N N 552 U "C3'" C N S 553 U "O3'" O N N 554 U "C2'" C N R 555 U "O2'" O N N 556 U "C1'" C N R 557 U N1 N N N 558 U C2 C N N 559 U O2 O N N 560 U N3 N N N 561 U C4 C N N 562 U O4 O N N 563 U C5 C N N 564 U C6 C N N 565 U HOP3 H N N 566 U HOP2 H N N 567 U "H5'" H N N 568 U "H5''" H N N 569 U "H4'" H N N 570 U "H3'" H N N 571 U "HO3'" H N N 572 U "H2'" H N N 573 U "HO2'" H N N 574 U "H1'" H N N 575 U H3 H N N 576 U H5 H N N 577 U H6 H N N 578 VAL N N N N 579 VAL CA C N S 580 VAL C C N N 581 VAL O O N N 582 VAL CB C N N 583 VAL CG1 C N N 584 VAL CG2 C N N 585 VAL OXT O N N 586 VAL H H N N 587 VAL H2 H N N 588 VAL HA H N N 589 VAL HB H N N 590 VAL HG11 H N N 591 VAL HG12 H N N 592 VAL HG13 H N N 593 VAL HG21 H N N 594 VAL HG22 H N N 595 VAL HG23 H N N 596 VAL HXT H N N 597 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 EPE N1 C2 sing N N 145 EPE N1 C6 sing N N 146 EPE N1 C9 sing N N 147 EPE C2 C3 sing N N 148 EPE C2 H21 sing N N 149 EPE C2 H22 sing N N 150 EPE C3 N4 sing N N 151 EPE C3 H31 sing N N 152 EPE C3 H32 sing N N 153 EPE N4 C5 sing N N 154 EPE N4 C7 sing N N 155 EPE C5 C6 sing N N 156 EPE C5 H51 sing N N 157 EPE C5 H52 sing N N 158 EPE C6 H61 sing N N 159 EPE C6 H62 sing N N 160 EPE C7 C8 sing N N 161 EPE C7 H71 sing N N 162 EPE C7 H72 sing N N 163 EPE C8 O8 sing N N 164 EPE C8 H81 sing N N 165 EPE C8 H82 sing N N 166 EPE O8 HO8 sing N N 167 EPE C9 C10 sing N N 168 EPE C9 H91 sing N N 169 EPE C9 H92 sing N N 170 EPE C10 S sing N N 171 EPE C10 H101 sing N N 172 EPE C10 H102 sing N N 173 EPE S O1S doub N N 174 EPE S O2S doub N N 175 EPE S O3S sing N N 176 EPE O3S HOS3 sing N N 177 G OP3 P sing N N 178 G OP3 HOP3 sing N N 179 G P OP1 doub N N 180 G P OP2 sing N N 181 G P "O5'" sing N N 182 G OP2 HOP2 sing N N 183 G "O5'" "C5'" sing N N 184 G "C5'" "C4'" sing N N 185 G "C5'" "H5'" sing N N 186 G "C5'" "H5''" sing N N 187 G "C4'" "O4'" sing N N 188 G "C4'" "C3'" sing N N 189 G "C4'" "H4'" sing N N 190 G "O4'" "C1'" sing N N 191 G "C3'" "O3'" sing N N 192 G "C3'" "C2'" sing N N 193 G "C3'" "H3'" sing N N 194 G "O3'" "HO3'" sing N N 195 G "C2'" "O2'" sing N N 196 G "C2'" "C1'" sing N N 197 G "C2'" "H2'" sing N N 198 G "O2'" "HO2'" sing N N 199 G "C1'" N9 sing N N 200 G "C1'" "H1'" sing N N 201 G N9 C8 sing Y N 202 G N9 C4 sing Y N 203 G C8 N7 doub Y N 204 G C8 H8 sing N N 205 G N7 C5 sing Y N 206 G C5 C6 sing N N 207 G C5 C4 doub Y N 208 G C6 O6 doub N N 209 G C6 N1 sing N N 210 G N1 C2 sing N N 211 G N1 H1 sing N N 212 G C2 N2 sing N N 213 G C2 N3 doub N N 214 G N2 H21 sing N N 215 G N2 H22 sing N N 216 G N3 C4 sing N N 217 GLN N CA sing N N 218 GLN N H sing N N 219 GLN N H2 sing N N 220 GLN CA C sing N N 221 GLN CA CB sing N N 222 GLN CA HA sing N N 223 GLN C O doub N N 224 GLN C OXT sing N N 225 GLN CB CG sing N N 226 GLN CB HB2 sing N N 227 GLN CB HB3 sing N N 228 GLN CG CD sing N N 229 GLN CG HG2 sing N N 230 GLN CG HG3 sing N N 231 GLN CD OE1 doub N N 232 GLN CD NE2 sing N N 233 GLN NE2 HE21 sing N N 234 GLN NE2 HE22 sing N N 235 GLN OXT HXT sing N N 236 GLU N CA sing N N 237 GLU N H sing N N 238 GLU N H2 sing N N 239 GLU CA C sing N N 240 GLU CA CB sing N N 241 GLU CA HA sing N N 242 GLU C O doub N N 243 GLU C OXT sing N N 244 GLU CB CG sing N N 245 GLU CB HB2 sing N N 246 GLU CB HB3 sing N N 247 GLU CG CD sing N N 248 GLU CG HG2 sing N N 249 GLU CG HG3 sing N N 250 GLU CD OE1 doub N N 251 GLU CD OE2 sing N N 252 GLU OE2 HE2 sing N N 253 GLU OXT HXT sing N N 254 GLY N CA sing N N 255 GLY N H sing N N 256 GLY N H2 sing N N 257 GLY CA C sing N N 258 GLY CA HA2 sing N N 259 GLY CA HA3 sing N N 260 GLY C O doub N N 261 GLY C OXT sing N N 262 GLY OXT HXT sing N N 263 GTP PG O1G doub N N 264 GTP PG O2G sing N N 265 GTP PG O3G sing N N 266 GTP PG O3B sing N N 267 GTP O2G HOG2 sing N N 268 GTP O3G HOG3 sing N N 269 GTP O3B PB sing N N 270 GTP PB O1B doub N N 271 GTP PB O2B sing N N 272 GTP PB O3A sing N N 273 GTP O2B HOB2 sing N N 274 GTP O3A PA sing N N 275 GTP PA O1A doub N N 276 GTP PA O2A sing N N 277 GTP PA "O5'" sing N N 278 GTP O2A HOA2 sing N N 279 GTP "O5'" "C5'" sing N N 280 GTP "C5'" "C4'" sing N N 281 GTP "C5'" "H5'" sing N N 282 GTP "C5'" "H5''" sing N N 283 GTP "C4'" "O4'" sing N N 284 GTP "C4'" "C3'" sing N N 285 GTP "C4'" "H4'" sing N N 286 GTP "O4'" "C1'" sing N N 287 GTP "C3'" "O3'" sing N N 288 GTP "C3'" "C2'" sing N N 289 GTP "C3'" "H3'" sing N N 290 GTP "O3'" "HO3'" sing N N 291 GTP "C2'" "O2'" sing N N 292 GTP "C2'" "C1'" sing N N 293 GTP "C2'" "H2'" sing N N 294 GTP "O2'" "HO2'" sing N N 295 GTP "C1'" N9 sing N N 296 GTP "C1'" "H1'" sing N N 297 GTP N9 C8 sing Y N 298 GTP N9 C4 sing Y N 299 GTP C8 N7 doub Y N 300 GTP C8 H8 sing N N 301 GTP N7 C5 sing Y N 302 GTP C5 C6 sing N N 303 GTP C5 C4 doub Y N 304 GTP C6 O6 doub N N 305 GTP C6 N1 sing N N 306 GTP N1 C2 sing N N 307 GTP N1 HN1 sing N N 308 GTP C2 N2 sing N N 309 GTP C2 N3 doub N N 310 GTP N2 HN21 sing N N 311 GTP N2 HN22 sing N N 312 GTP N3 C4 sing N N 313 HIS N CA sing N N 314 HIS N H sing N N 315 HIS N H2 sing N N 316 HIS CA C sing N N 317 HIS CA CB sing N N 318 HIS CA HA sing N N 319 HIS C O doub N N 320 HIS C OXT sing N N 321 HIS CB CG sing N N 322 HIS CB HB2 sing N N 323 HIS CB HB3 sing N N 324 HIS CG ND1 sing Y N 325 HIS CG CD2 doub Y N 326 HIS ND1 CE1 doub Y N 327 HIS ND1 HD1 sing N N 328 HIS CD2 NE2 sing Y N 329 HIS CD2 HD2 sing N N 330 HIS CE1 NE2 sing Y N 331 HIS CE1 HE1 sing N N 332 HIS NE2 HE2 sing N N 333 HIS OXT HXT sing N N 334 HOH O H1 sing N N 335 HOH O H2 sing N N 336 ILE N CA sing N N 337 ILE N H sing N N 338 ILE N H2 sing N N 339 ILE CA C sing N N 340 ILE CA CB sing N N 341 ILE CA HA sing N N 342 ILE C O doub N N 343 ILE C OXT sing N N 344 ILE CB CG1 sing N N 345 ILE CB CG2 sing N N 346 ILE CB HB sing N N 347 ILE CG1 CD1 sing N N 348 ILE CG1 HG12 sing N N 349 ILE CG1 HG13 sing N N 350 ILE CG2 HG21 sing N N 351 ILE CG2 HG22 sing N N 352 ILE CG2 HG23 sing N N 353 ILE CD1 HD11 sing N N 354 ILE CD1 HD12 sing N N 355 ILE CD1 HD13 sing N N 356 ILE OXT HXT sing N N 357 LEU N CA sing N N 358 LEU N H sing N N 359 LEU N H2 sing N N 360 LEU CA C sing N N 361 LEU CA CB sing N N 362 LEU CA HA sing N N 363 LEU C O doub N N 364 LEU C OXT sing N N 365 LEU CB CG sing N N 366 LEU CB HB2 sing N N 367 LEU CB HB3 sing N N 368 LEU CG CD1 sing N N 369 LEU CG CD2 sing N N 370 LEU CG HG sing N N 371 LEU CD1 HD11 sing N N 372 LEU CD1 HD12 sing N N 373 LEU CD1 HD13 sing N N 374 LEU CD2 HD21 sing N N 375 LEU CD2 HD22 sing N N 376 LEU CD2 HD23 sing N N 377 LEU OXT HXT sing N N 378 LYS N CA sing N N 379 LYS N H sing N N 380 LYS N H2 sing N N 381 LYS CA C sing N N 382 LYS CA CB sing N N 383 LYS CA HA sing N N 384 LYS C O doub N N 385 LYS C OXT sing N N 386 LYS CB CG sing N N 387 LYS CB HB2 sing N N 388 LYS CB HB3 sing N N 389 LYS CG CD sing N N 390 LYS CG HG2 sing N N 391 LYS CG HG3 sing N N 392 LYS CD CE sing N N 393 LYS CD HD2 sing N N 394 LYS CD HD3 sing N N 395 LYS CE NZ sing N N 396 LYS CE HE2 sing N N 397 LYS CE HE3 sing N N 398 LYS NZ HZ1 sing N N 399 LYS NZ HZ2 sing N N 400 LYS NZ HZ3 sing N N 401 LYS OXT HXT sing N N 402 MET N CA sing N N 403 MET N H sing N N 404 MET N H2 sing N N 405 MET CA C sing N N 406 MET CA CB sing N N 407 MET CA HA sing N N 408 MET C O doub N N 409 MET C OXT sing N N 410 MET CB CG sing N N 411 MET CB HB2 sing N N 412 MET CB HB3 sing N N 413 MET CG SD sing N N 414 MET CG HG2 sing N N 415 MET CG HG3 sing N N 416 MET SD CE sing N N 417 MET CE HE1 sing N N 418 MET CE HE2 sing N N 419 MET CE HE3 sing N N 420 MET OXT HXT sing N N 421 MPD C1 C2 sing N N 422 MPD C1 H11 sing N N 423 MPD C1 H12 sing N N 424 MPD C1 H13 sing N N 425 MPD C2 O2 sing N N 426 MPD C2 CM sing N N 427 MPD C2 C3 sing N N 428 MPD O2 HO2 sing N N 429 MPD CM HM1 sing N N 430 MPD CM HM2 sing N N 431 MPD CM HM3 sing N N 432 MPD C3 C4 sing N N 433 MPD C3 H31 sing N N 434 MPD C3 H32 sing N N 435 MPD C4 O4 sing N N 436 MPD C4 C5 sing N N 437 MPD C4 H4 sing N N 438 MPD O4 HO4 sing N N 439 MPD C5 H51 sing N N 440 MPD C5 H52 sing N N 441 MPD C5 H53 sing N N 442 PHE N CA sing N N 443 PHE N H sing N N 444 PHE N H2 sing N N 445 PHE CA C sing N N 446 PHE CA CB sing N N 447 PHE CA HA sing N N 448 PHE C O doub N N 449 PHE C OXT sing N N 450 PHE CB CG sing N N 451 PHE CB HB2 sing N N 452 PHE CB HB3 sing N N 453 PHE CG CD1 doub Y N 454 PHE CG CD2 sing Y N 455 PHE CD1 CE1 sing Y N 456 PHE CD1 HD1 sing N N 457 PHE CD2 CE2 doub Y N 458 PHE CD2 HD2 sing N N 459 PHE CE1 CZ doub Y N 460 PHE CE1 HE1 sing N N 461 PHE CE2 CZ sing Y N 462 PHE CE2 HE2 sing N N 463 PHE CZ HZ sing N N 464 PHE OXT HXT sing N N 465 PRO N CA sing N N 466 PRO N CD sing N N 467 PRO N H sing N N 468 PRO CA C sing N N 469 PRO CA CB sing N N 470 PRO CA HA sing N N 471 PRO C O doub N N 472 PRO C OXT sing N N 473 PRO CB CG sing N N 474 PRO CB HB2 sing N N 475 PRO CB HB3 sing N N 476 PRO CG CD sing N N 477 PRO CG HG2 sing N N 478 PRO CG HG3 sing N N 479 PRO CD HD2 sing N N 480 PRO CD HD3 sing N N 481 PRO OXT HXT sing N N 482 SER N CA sing N N 483 SER N H sing N N 484 SER N H2 sing N N 485 SER CA C sing N N 486 SER CA CB sing N N 487 SER CA HA sing N N 488 SER C O doub N N 489 SER C OXT sing N N 490 SER CB OG sing N N 491 SER CB HB2 sing N N 492 SER CB HB3 sing N N 493 SER OG HG sing N N 494 SER OXT HXT sing N N 495 THR N CA sing N N 496 THR N H sing N N 497 THR N H2 sing N N 498 THR CA C sing N N 499 THR CA CB sing N N 500 THR CA HA sing N N 501 THR C O doub N N 502 THR C OXT sing N N 503 THR CB OG1 sing N N 504 THR CB CG2 sing N N 505 THR CB HB sing N N 506 THR OG1 HG1 sing N N 507 THR CG2 HG21 sing N N 508 THR CG2 HG22 sing N N 509 THR CG2 HG23 sing N N 510 THR OXT HXT sing N N 511 TYR N CA sing N N 512 TYR N H sing N N 513 TYR N H2 sing N N 514 TYR CA C sing N N 515 TYR CA CB sing N N 516 TYR CA HA sing N N 517 TYR C O doub N N 518 TYR C OXT sing N N 519 TYR CB CG sing N N 520 TYR CB HB2 sing N N 521 TYR CB HB3 sing N N 522 TYR CG CD1 doub Y N 523 TYR CG CD2 sing Y N 524 TYR CD1 CE1 sing Y N 525 TYR CD1 HD1 sing N N 526 TYR CD2 CE2 doub Y N 527 TYR CD2 HD2 sing N N 528 TYR CE1 CZ doub Y N 529 TYR CE1 HE1 sing N N 530 TYR CE2 CZ sing Y N 531 TYR CE2 HE2 sing N N 532 TYR CZ OH sing N N 533 TYR OH HH sing N N 534 TYR OXT HXT sing N N 535 U OP3 P sing N N 536 U OP3 HOP3 sing N N 537 U P OP1 doub N N 538 U P OP2 sing N N 539 U P "O5'" sing N N 540 U OP2 HOP2 sing N N 541 U "O5'" "C5'" sing N N 542 U "C5'" "C4'" sing N N 543 U "C5'" "H5'" sing N N 544 U "C5'" "H5''" sing N N 545 U "C4'" "O4'" sing N N 546 U "C4'" "C3'" sing N N 547 U "C4'" "H4'" sing N N 548 U "O4'" "C1'" sing N N 549 U "C3'" "O3'" sing N N 550 U "C3'" "C2'" sing N N 551 U "C3'" "H3'" sing N N 552 U "O3'" "HO3'" sing N N 553 U "C2'" "O2'" sing N N 554 U "C2'" "C1'" sing N N 555 U "C2'" "H2'" sing N N 556 U "O2'" "HO2'" sing N N 557 U "C1'" N1 sing N N 558 U "C1'" "H1'" sing N N 559 U N1 C2 sing N N 560 U N1 C6 sing N N 561 U C2 O2 doub N N 562 U C2 N3 sing N N 563 U N3 C4 sing N N 564 U N3 H3 sing N N 565 U C4 O4 doub N N 566 U C4 C5 sing N N 567 U C5 C6 doub N N 568 U C5 H5 sing N N 569 U C6 H6 sing N N 570 VAL N CA sing N N 571 VAL N H sing N N 572 VAL N H2 sing N N 573 VAL CA C sing N N 574 VAL CA CB sing N N 575 VAL CA HA sing N N 576 VAL C O doub N N 577 VAL C OXT sing N N 578 VAL CB CG1 sing N N 579 VAL CB CG2 sing N N 580 VAL CB HB sing N N 581 VAL CG1 HG11 sing N N 582 VAL CG1 HG12 sing N N 583 VAL CG1 HG13 sing N N 584 VAL CG2 HG21 sing N N 585 VAL CG2 HG22 sing N N 586 VAL CG2 HG23 sing N N 587 VAL OXT HXT sing N N 588 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 7KKV 'double helix' 7KKV 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B GTP 1 1_555 B C 60 1_555 -0.692 -0.032 -0.061 -5.878 0.713 5.967 1 B_GTP484:C543_B B 484 ? B 543 ? 19 1 1 B G 2 1_555 B C 59 1_555 -0.229 -0.159 0.063 3.312 -6.827 3.580 2 B_G485:C542_B B 485 ? B 542 ? 19 1 1 B C 3 1_555 B G 58 1_555 0.405 -0.048 -0.184 3.070 -10.645 4.958 3 B_C486:G541_B B 486 ? B 541 ? 19 1 1 B C 4 1_555 B G 57 1_555 0.368 -0.117 -0.034 -0.729 -8.153 1.814 4 B_C487:G540_B B 487 ? B 540 ? 19 1 1 B A 5 1_555 B U 56 1_555 -0.018 -0.136 0.207 -2.467 -10.277 3.965 5 B_A488:U539_B B 488 ? B 539 ? 20 1 1 B G 6 1_555 B C 55 1_555 -0.384 -0.173 -0.185 -13.939 -21.679 4.736 6 B_G489:C538_B B 489 ? B 538 ? 19 1 1 B U 7 1_555 B A 54 1_555 0.175 -0.043 0.227 -15.013 -19.235 0.725 7 B_U490:A537_B B 490 ? B 537 ? 20 1 1 B C 8 1_555 B U 53 1_555 0.159 0.232 -0.307 5.367 0.180 -35.627 8 B_C491:U536_B B 491 ? B 536 ? ? ? 1 B G 44 1_555 B C 52 1_555 -0.579 -0.135 -0.235 -8.723 -11.631 1.592 9 B_G527:C535_B B 527 ? B 535 ? 19 1 1 B G 45 1_555 B C 51 1_555 -0.246 0.267 -0.511 -20.920 -11.534 3.567 10 B_G528:C534_B B 528 ? B 534 ? 19 1 1 B G 46 1_555 B A 49 1_555 7.896 -5.385 0.487 13.744 -0.301 -47.009 11 B_G529:A532_B B 529 ? B 532 ? ? ? 1 B A 21 1_555 B G 18 1_555 -7.838 -5.123 0.947 -7.230 -19.963 -47.499 12 B_A504:G501_B B 504 ? B 501 ? ? ? 1 B C 22 1_555 B G 17 1_555 0.038 -0.214 -0.096 0.903 0.848 -2.569 13 B_C505:G500_B B 505 ? B 500 ? 19 1 1 B A 23 1_555 B U 16 1_555 0.260 -0.126 -0.095 2.442 -1.604 4.970 14 B_A506:U499_B B 506 ? B 499 ? 20 1 1 B G 24 1_555 B U 14 1_555 -2.392 -0.624 0.171 7.151 -10.561 1.582 15 B_G507:U497_B B 507 ? B 497 ? 28 1 1 B C 25 1_555 B G 13 1_555 0.070 -0.145 -0.164 10.036 -19.561 5.474 16 B_C508:G496_B B 508 ? B 496 ? 19 1 1 B G 26 1_555 B C 12 1_555 -0.207 -0.208 -0.289 -3.236 -11.216 2.132 17 B_G509:C495_B B 509 ? B 495 ? 19 1 1 B C 27 1_555 B G 11 1_555 0.366 -0.081 -0.163 1.715 -10.310 3.759 18 B_C510:G494_B B 510 ? B 494 ? 19 1 1 B C 28 1_555 B G 10 1_555 0.006 -0.115 -0.119 3.600 -10.374 -1.808 19 B_C511:G493_B B 511 ? B 493 ? 19 1 1 B A 29 1_555 B U 9 1_555 0.114 -0.189 0.048 1.502 -6.536 -0.304 20 B_A512:U492_B B 512 ? B 492 ? 20 1 1 B A 30 1_555 B U 43 1_555 0.259 -0.171 -0.161 -6.662 -7.819 0.465 21 B_A513:U526_B B 513 ? B 526 ? 20 1 1 B G 31 1_555 B U 42 1_555 -2.341 -0.384 0.199 2.779 -15.529 2.997 22 B_G514:U525_B B 514 ? B 525 ? 28 1 1 B U 32 1_555 B A 41 1_555 0.092 0.137 -0.014 2.839 -14.102 6.523 23 B_U515:A524_B B 515 ? B 524 ? 20 1 1 B U 33 1_555 B A 40 1_555 0.160 -0.095 -0.199 8.826 -6.883 5.812 24 B_U516:A523_B B 516 ? B 523 ? 20 1 1 B C 34 1_555 B G 39 1_555 0.593 -0.096 -0.319 5.571 -3.536 4.991 25 B_C517:G522_B B 517 ? B 522 ? 19 1 1 B U 35 1_555 B G 38 1_555 1.088 -5.081 -0.073 -4.481 0.350 -104.381 26 B_U518:G521_B B 518 ? B 521 ? ? 6 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B GTP 1 1_555 B C 60 1_555 B G 2 1_555 B C 59 1_555 -0.587 -1.984 2.981 -2.645 7.182 28.908 -5.110 0.673 2.470 14.077 5.184 29.883 1 BB_GTP484G485:C542C543_BB B 484 ? B 543 ? B 485 ? B 542 ? 1 B G 2 1_555 B C 59 1_555 B C 3 1_555 B G 58 1_555 0.225 -1.544 3.248 2.203 9.824 34.338 -3.838 -0.071 2.726 16.213 -3.635 35.741 2 BB_G485C486:G541C542_BB B 485 ? B 542 ? B 486 ? B 541 ? 1 B C 3 1_555 B G 58 1_555 B C 4 1_555 B G 57 1_555 -0.182 -1.937 3.338 0.371 9.364 28.787 -5.476 0.419 2.591 18.235 -0.723 30.243 3 BB_C486C487:G540G541_BB B 486 ? B 541 ? B 487 ? B 540 ? 1 B C 4 1_555 B G 57 1_555 B A 5 1_555 B U 56 1_555 0.630 -1.744 3.101 1.203 10.818 29.602 -4.952 -0.967 2.356 20.328 -2.260 31.497 4 BB_C487A488:U539G540_BB B 487 ? B 540 ? B 488 ? B 539 ? 1 B A 5 1_555 B U 56 1_555 B G 6 1_555 B C 55 1_555 0.787 -2.399 3.518 7.019 10.171 26.479 -6.928 -0.068 2.563 20.823 -14.370 29.173 5 BB_A488G489:C538U539_BB B 488 ? B 539 ? B 489 ? B 538 ? 1 B G 6 1_555 B C 55 1_555 B U 7 1_555 B A 54 1_555 -0.663 -1.435 3.193 -2.333 4.943 36.752 -2.881 0.743 3.016 7.786 3.675 37.143 6 BB_G489U490:A537C538_BB B 489 ? B 538 ? B 490 ? B 537 ? 1 B U 7 1_555 B A 54 1_555 B C 8 1_555 B U 53 1_555 -1.794 -1.407 2.852 6.776 12.079 29.600 -4.049 4.060 1.721 22.178 -12.442 32.614 7 BB_U490C491:U536A537_BB B 490 ? B 537 ? B 491 ? B 536 ? 1 B C 8 1_555 B U 53 1_555 B G 44 1_555 B C 52 1_555 2.954 -2.252 3.738 1.785 6.507 31.677 -5.302 -4.953 3.378 11.753 -3.225 32.370 8 BB_C491G527:C535U536_BB B 491 ? B 536 ? B 527 ? B 535 ? 1 B G 44 1_555 B C 52 1_555 B G 45 1_555 B C 51 1_555 0.006 -1.774 3.561 2.742 7.145 37.533 -3.639 0.349 3.176 10.965 -4.208 38.278 9 BB_G527G528:C534C535_BB B 527 ? B 535 ? B 528 ? B 534 ? 1 B G 45 1_555 B C 51 1_555 B G 46 1_555 B A 49 1_555 -1.905 -1.460 2.471 -6.430 3.447 67.773 -1.403 1.514 2.553 3.082 5.749 68.118 10 BB_G528G529:A532C534_BB B 528 ? B 534 ? B 529 ? B 532 ? 1 B A 21 1_555 B G 18 1_555 B C 22 1_555 B G 17 1_555 4.297 -1.731 3.056 0.895 14.830 53.585 -2.623 -4.571 2.596 16.104 -0.972 55.460 11 BB_A504C505:G500G501_BB B 504 ? B 501 ? B 505 ? B 500 ? 1 B C 22 1_555 B G 17 1_555 B A 23 1_555 B U 16 1_555 1.065 -1.772 3.293 -1.086 0.708 35.155 -3.037 -1.924 3.225 1.172 1.797 35.178 12 BB_C505A506:U499G500_BB B 505 ? B 500 ? B 506 ? B 499 ? 1 B A 23 1_555 B U 16 1_555 B G 24 1_555 B U 14 1_555 2.230 -0.993 3.059 -5.406 8.011 44.113 -1.921 -3.329 2.573 10.516 7.097 45.107 13 BB_A506G507:U497U499_BB B 506 ? B 499 ? B 507 ? B 497 ? 1 B G 24 1_555 B U 14 1_555 B C 25 1_555 B G 13 1_555 -0.124 -1.228 3.173 -0.514 9.878 40.412 -2.703 0.124 2.811 14.046 0.731 41.556 14 BB_G507C508:G496U497_BB B 507 ? B 497 ? B 508 ? B 496 ? 1 B C 25 1_555 B G 13 1_555 B G 26 1_555 B C 12 1_555 -0.636 -1.767 3.437 -0.823 20.022 29.404 -5.543 0.936 1.903 34.815 1.431 35.458 15 BB_C508G509:C495G496_BB B 508 ? B 496 ? B 509 ? B 495 ? 1 B G 26 1_555 B C 12 1_555 B C 27 1_555 B G 11 1_555 0.287 -1.397 3.185 -0.628 9.566 31.745 -3.922 -0.601 2.657 17.009 1.117 33.125 16 BB_G509C510:G494C495_BB B 509 ? B 495 ? B 510 ? B 494 ? 1 B C 27 1_555 B G 11 1_555 B C 28 1_555 B G 10 1_555 0.022 -1.761 3.185 1.922 8.334 29.816 -4.747 0.293 2.606 15.792 -3.642 30.991 17 BB_C510C511:G493G494_BB B 510 ? B 494 ? B 511 ? B 493 ? 1 B C 28 1_555 B G 10 1_555 B A 29 1_555 B U 9 1_555 1.011 -2.233 3.264 0.593 5.126 28.538 -5.525 -1.896 2.848 10.292 -1.192 28.991 18 BB_C511A512:U492G493_BB B 511 ? B 493 ? B 512 ? B 492 ? 1 B A 29 1_555 B U 9 1_555 B A 30 1_555 B U 43 1_555 0.105 -2.376 3.494 1.732 5.391 35.092 -4.692 0.084 3.108 8.869 -2.849 35.532 19 BB_A512A513:U526U492_BB B 512 ? B 492 ? B 513 ? B 526 ? 1 B A 30 1_555 B U 43 1_555 B G 31 1_555 B U 42 1_555 0.225 -2.107 2.769 -6.821 11.340 19.501 -7.723 -2.089 1.230 29.486 17.734 23.531 20 BB_A513G514:U525U526_BB B 513 ? B 526 ? B 514 ? B 525 ? 1 B G 31 1_555 B U 42 1_555 B U 32 1_555 B A 41 1_555 -0.097 -1.408 3.249 -0.985 3.199 40.110 -2.401 0.032 3.133 4.654 1.433 40.243 21 BB_G514U515:A524U525_BB B 514 ? B 525 ? B 515 ? B 524 ? 1 B U 32 1_555 B A 41 1_555 B U 33 1_555 B A 40 1_555 -0.006 -1.583 3.069 -0.648 6.499 29.153 -4.271 -0.108 2.661 12.711 1.268 29.860 22 BB_U515U516:A523A524_BB B 515 ? B 524 ? B 516 ? B 523 ? 1 B U 33 1_555 B A 40 1_555 B C 34 1_555 B G 39 1_555 0.270 -1.809 3.288 0.612 6.678 32.493 -4.239 -0.375 2.874 11.778 -1.080 33.160 23 BB_U516C517:G522A523_BB B 516 ? B 523 ? B 517 ? B 522 ? 1 B C 34 1_555 B G 39 1_555 B U 35 1_555 B G 38 1_555 -1.623 -0.930 3.558 6.108 5.339 90.989 -0.762 1.263 3.423 3.737 -4.275 91.271 24 BB_C517U518:G521G522_BB B 517 ? B 522 ? B 518 ? B 521 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' P01GM022778 1 'Howard Hughes Medical Institute (HHMI)' 'United States' ? 2 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id EPE _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id EPE _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 4 '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' EPE 5 'MAGNESIUM ION' MG 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 7K9D _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #