data_7KOM # _entry.id 7KOM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.352 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7KOM pdb_00007kom 10.2210/pdb7kom/pdb WWPDB D_1000252863 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id CSGID-IDP97031 _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7KOM _pdbx_database_status.recvd_initial_deposition_date 2020-11-09 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Minasov, G.' 1 ? 'Shuvalova, L.' 2 ? 'Kiryukhina, O.' 3 ? 'Dubrovska, I.' 4 ? 'Endres, M.' 5 ? 'Satchell, K.J.F.' 6 ? 'Center for Structural Genomics of Infectious Diseases (CSGID)' 7 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'High Resolution Crystal Structure of Putative Pterin Binding Protein PruR (VV2_1280) from Vibrio vulnificus CMCP6.' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Minasov, G.' 1 ? primary 'Shuvalova, L.' 2 ? primary 'Kiryukhina, O.' 3 ? primary 'Dubrovska, I.' 4 ? primary 'Endres, M.' 5 ? primary 'Satchell, K.J.F.' 6 ? primary 'Center for Structural Genomics of Infectious Diseases (CSGID)' 7 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7KOM _cell.details ? _cell.formula_units_Z ? _cell.length_a 33.046 _cell.length_a_esd ? _cell.length_b 71.087 _cell.length_b_esd ? _cell.length_c 106.359 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KOM _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Oxidored_molyb domain-containing protein' 16210.691 1 ? ? ? ? 2 non-polymer syn 'FORMIC ACID' 46.025 2 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 4 water nat water 18.015 207 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNAYNLQ(MSE)DIPHAPTVVLTVQDLEQ(MSE)EATQYTT(MSE)LPWLSAPATFTGVKLSTLLSQQYGFIPNRVTLRA LNDYAADIDLSDIEKYQPIVAYRQDGKP(MSE)RVRDKGPFWLIYPQSSFPKELNNERYHSQ(MSE)VWQLKQIHIAK ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAYNLQMDIPHAPTVVLTVQDLEQMEATQYTTMLPWLSAPATFTGVKLSTLLSQQYGFIPNRVTLRALNDYAADIDLSD IEKYQPIVAYRQDGKPMRVRDKGPFWLIYPQSSFPKELNNERYHSQMVWQLKQIHIAK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier CSGID-IDP97031 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 TYR n 1 5 ASN n 1 6 LEU n 1 7 GLN n 1 8 MSE n 1 9 ASP n 1 10 ILE n 1 11 PRO n 1 12 HIS n 1 13 ALA n 1 14 PRO n 1 15 THR n 1 16 VAL n 1 17 VAL n 1 18 LEU n 1 19 THR n 1 20 VAL n 1 21 GLN n 1 22 ASP n 1 23 LEU n 1 24 GLU n 1 25 GLN n 1 26 MSE n 1 27 GLU n 1 28 ALA n 1 29 THR n 1 30 GLN n 1 31 TYR n 1 32 THR n 1 33 THR n 1 34 MSE n 1 35 LEU n 1 36 PRO n 1 37 TRP n 1 38 LEU n 1 39 SER n 1 40 ALA n 1 41 PRO n 1 42 ALA n 1 43 THR n 1 44 PHE n 1 45 THR n 1 46 GLY n 1 47 VAL n 1 48 LYS n 1 49 LEU n 1 50 SER n 1 51 THR n 1 52 LEU n 1 53 LEU n 1 54 SER n 1 55 GLN n 1 56 GLN n 1 57 TYR n 1 58 GLY n 1 59 PHE n 1 60 ILE n 1 61 PRO n 1 62 ASN n 1 63 ARG n 1 64 VAL n 1 65 THR n 1 66 LEU n 1 67 ARG n 1 68 ALA n 1 69 LEU n 1 70 ASN n 1 71 ASP n 1 72 TYR n 1 73 ALA n 1 74 ALA n 1 75 ASP n 1 76 ILE n 1 77 ASP n 1 78 LEU n 1 79 SER n 1 80 ASP n 1 81 ILE n 1 82 GLU n 1 83 LYS n 1 84 TYR n 1 85 GLN n 1 86 PRO n 1 87 ILE n 1 88 VAL n 1 89 ALA n 1 90 TYR n 1 91 ARG n 1 92 GLN n 1 93 ASP n 1 94 GLY n 1 95 LYS n 1 96 PRO n 1 97 MSE n 1 98 ARG n 1 99 VAL n 1 100 ARG n 1 101 ASP n 1 102 LYS n 1 103 GLY n 1 104 PRO n 1 105 PHE n 1 106 TRP n 1 107 LEU n 1 108 ILE n 1 109 TYR n 1 110 PRO n 1 111 GLN n 1 112 SER n 1 113 SER n 1 114 PHE n 1 115 PRO n 1 116 LYS n 1 117 GLU n 1 118 LEU n 1 119 ASN n 1 120 ASN n 1 121 GLU n 1 122 ARG n 1 123 TYR n 1 124 HIS n 1 125 SER n 1 126 GLN n 1 127 MSE n 1 128 VAL n 1 129 TRP n 1 130 GLN n 1 131 LEU n 1 132 LYS n 1 133 GLN n 1 134 ILE n 1 135 HIS n 1 136 ILE n 1 137 ALA n 1 138 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 138 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene VV2_1280 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain CMCP6 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vibrio vulnificus (strain CMCP6)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 216895 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant magic _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG53 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A3Q0L063_VIBVU _struct_ref.pdbx_db_accession A0A3Q0L063 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;YNLQMDIPHAPTVVLTVQDLEQMEATQYTTMLPWLSAPATFTGVKLSTLLSQQYGFIPNRVTLRALNDYAADIDLSDIEK YQPIVAYRQDGKPMRVRDKGPFWLIYPQSSFPKELNNERYHSQMVWQLKQIHIAK ; _struct_ref.pdbx_align_begin 19 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7KOM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 138 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A3Q0L063 _struct_ref_seq.db_align_beg 19 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 153 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 19 _struct_ref_seq.pdbx_auth_seq_align_end 153 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7KOM SER A 1 ? UNP A0A3Q0L063 ? ? 'expression tag' 16 1 1 7KOM ASN A 2 ? UNP A0A3Q0L063 ? ? 'expression tag' 17 2 1 7KOM ALA A 3 ? UNP A0A3Q0L063 ? ? 'expression tag' 18 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7KOM _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.0 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 38.9 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 3.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;Protein: 7.2 mg/ml, 0.5M Sodium chloride, 0.01M Tris HCl (pH 8.3); Screen: Classics II (A7), 0.1M Citric acid (pH 3.5), 3.0M Sodium chloride. Cryo: 4.0M Formate ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details Be _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-11-15 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Diamond (C111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97856 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-G' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97856 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-G _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 6.8 _reflns.entry_id 7KOM _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 0.99 _reflns.d_resolution_low 30.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 65367 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.0 _reflns.percent_possible_obs 93.4 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.3 _reflns.pdbx_Rmerge_I_obs 0.075 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.075 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 45.1 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 2.854 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.081 _reflns.pdbx_Rpim_I_all 0.030 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 0.99 _reflns_shell.d_res_low 1.01 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2840 _reflns_shell.percent_possible_all 82.2 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.679 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 6.0 _reflns_shell.pdbx_Rsym_value 0.679 _reflns_shell.pdbx_chi_squared 1.003 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.740 _reflns_shell.pdbx_Rpim_I_all 0.288 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.821 _reflns_shell.pdbx_CC_star 0.950 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -1.0700 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 0.6100 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 0.4700 _refine.B_iso_max 55.570 _refine.B_iso_mean 9.1170 _refine.B_iso_min 3.230 _refine.correlation_coeff_Fo_to_Fc 0.9810 _refine.correlation_coeff_Fo_to_Fc_free 0.9730 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7KOM _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 0.9900 _refine.ls_d_res_low 26.6000 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 62187 _refine.ls_number_reflns_R_free 3176 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 93.2100 _refine.ls_percent_reflns_R_free 4.9000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1205 _refine.ls_R_factor_R_free 0.1410 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1195 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.0230 _refine.pdbx_overall_ESU_R_Free 0.0240 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 0.5500 _refine.overall_SU_ML 0.0130 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 0.9900 _refine_hist.d_res_low 26.6000 _refine_hist.number_atoms_solvent 254 _refine_hist.number_atoms_total 1359 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 134 _refine_hist.pdbx_B_iso_mean_ligand 19.26 _refine_hist.pdbx_B_iso_mean_solvent 20.72 _refine_hist.pdbx_number_atoms_protein 1098 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 0.013 1447 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.017 1314 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.530 1.659 2004 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.389 1.574 3084 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 4.926 5.000 191 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 31.417 22.625 80 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 9.826 15.000 238 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 13.304 15.000 10 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.084 0.200 183 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 0.020 1737 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 309 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 9.196 3.000 2759 ? r_rigid_bond_restr ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 0.9900 _refine_ls_shell.d_res_low 1.0160 _refine_ls_shell.number_reflns_all 4270 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 201 _refine_ls_shell.number_reflns_R_work 4069 _refine_ls_shell.percent_reflns_obs 82.9100 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3010 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2600 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 7KOM _struct.title 'High Resolution Crystal Structure of Putative Pterin Binding Protein PruR (VV2_1280) from Vibrio vulnificus CMCP6' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7KOM _struct_keywords.text ;Structural Genomics, Center for Structural Genomics of Infectious Diseases, CSGID, Pterin binding, pterin, UNKNOWN FUNCTION, Pterin binding protein ; _struct_keywords.pdbx_keywords 'Pterin binding protein' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 19 ? GLN A 25 ? THR A 34 GLN A 40 1 ? 7 HELX_P HELX_P2 AA2 LEU A 49 ? GLY A 58 ? LEU A 64 GLY A 73 1 ? 10 HELX_P HELX_P3 AA3 LEU A 78 ? GLN A 85 ? LEU A 93 GLN A 100 1 ? 8 HELX_P HELX_P4 AA4 PRO A 110 ? SER A 113 ? PRO A 125 SER A 128 5 ? 4 HELX_P HELX_P5 AA5 PHE A 114 ? ASN A 119 ? PHE A 129 ASN A 134 1 ? 6 HELX_P HELX_P6 AA6 ASN A 120 ? SER A 125 ? ASN A 135 SER A 140 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLN 7 C A ? ? 1_555 A MSE 8 N A ? A GLN 22 A MSE 23 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale2 covale both ? A GLN 7 C B ? ? 1_555 A MSE 8 N B ? A GLN 22 A MSE 23 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale3 covale both ? A MSE 8 C A ? ? 1_555 A ASP 9 N ? ? A MSE 23 A ASP 24 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale4 covale both ? A MSE 8 C B ? ? 1_555 A ASP 9 N ? ? A MSE 23 A ASP 24 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale5 covale both ? A GLN 25 C A ? ? 1_555 A MSE 26 N ? ? A GLN 40 A MSE 41 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale6 covale both ? A GLN 25 C B ? ? 1_555 A MSE 26 N ? ? A GLN 40 A MSE 41 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale7 covale both ? A MSE 26 C ? ? ? 1_555 A GLU 27 N ? ? A MSE 41 A GLU 42 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale8 covale both ? A THR 33 C ? ? ? 1_555 A MSE 34 N ? ? A THR 48 A MSE 49 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale9 covale both ? A MSE 34 C ? ? ? 1_555 A LEU 35 N ? ? A MSE 49 A LEU 50 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale10 covale both ? A PRO 96 C A ? ? 1_555 A MSE 97 N ? ? A PRO 111 A MSE 112 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale11 covale both ? A PRO 96 C B ? ? 1_555 A MSE 97 N ? ? A PRO 111 A MSE 112 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale12 covale both ? A MSE 97 C ? ? ? 1_555 A ARG 98 N A ? A MSE 112 A ARG 113 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale13 covale both ? A MSE 97 C ? ? ? 1_555 A ARG 98 N B ? A MSE 112 A ARG 113 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale14 covale both ? A GLN 126 C ? ? ? 1_555 A MSE 127 N ? ? A GLN 141 A MSE 142 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale15 covale both ? A MSE 127 C ? ? ? 1_555 A VAL 128 N ? ? A MSE 142 A VAL 143 1_555 ? ? ? ? ? ? ? 1.339 ? ? metalc1 metalc ? ? A SER 125 OG A ? ? 1_555 D NA . NA A ? A SER 140 A NA 203 1_555 ? ? ? ? ? ? ? 2.361 ? ? metalc2 metalc ? ? D NA . NA A ? ? 1_555 E HOH . O ? ? A NA 203 A HOH 324 1_555 ? ? ? ? ? ? ? 2.424 ? ? metalc3 metalc ? ? D NA . NA A ? ? 1_555 E HOH . O ? ? A NA 203 A HOH 367 1_555 ? ? ? ? ? ? ? 2.458 ? ? metalc4 metalc ? ? D NA . NA A ? ? 1_555 E HOH . O ? ? A NA 203 A HOH 373 1_555 ? ? ? ? ? ? ? 2.392 ? ? metalc5 metalc ? ? D NA . NA A ? ? 1_555 E HOH . O ? ? A NA 203 A HOH 440 1_555 ? ? ? ? ? ? ? 2.362 ? ? metalc6 metalc ? ? D NA . NA A ? ? 1_555 E HOH . O ? ? A NA 203 A HOH 499 1_555 ? ? ? ? ? ? ? 2.375 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 103 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 118 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 104 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 119 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.56 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 16 ? LEU A 18 ? VAL A 31 LEU A 33 AA1 2 LEU A 6 ? MSE A 8 ? LEU A 21 MSE A 23 AA1 3 LEU A 131 ? ILE A 136 ? LEU A 146 ILE A 151 AA1 4 ARG A 63 ? ALA A 68 ? ARG A 78 ALA A 83 AA1 5 ALA A 73 ? ASP A 77 ? ALA A 88 ASP A 92 AA2 1 THR A 29 ? THR A 33 ? THR A 44 THR A 48 AA2 2 ALA A 42 ? LYS A 48 ? ALA A 57 LYS A 63 AA2 3 ILE A 87 ? GLN A 92 ? ILE A 102 GLN A 107 AA2 4 TRP A 106 ? ILE A 108 ? TRP A 121 ILE A 123 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O VAL A 16 ? O VAL A 31 N MSE A 8 ? N MSE A 23 AA1 2 3 N GLN A 7 ? N GLN A 22 O LYS A 132 ? O LYS A 147 AA1 3 4 O HIS A 135 ? O HIS A 150 N THR A 65 ? N THR A 80 AA1 4 5 N LEU A 66 ? N LEU A 81 O ALA A 74 ? O ALA A 89 AA2 1 2 N TYR A 31 ? N TYR A 46 O PHE A 44 ? O PHE A 59 AA2 2 3 N VAL A 47 ? N VAL A 62 O VAL A 88 ? O VAL A 103 AA2 3 4 N ILE A 87 ? N ILE A 102 O ILE A 108 ? O ILE A 123 # _atom_sites.entry_id 7KOM _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.030261 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014067 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009402 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N NA O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 16 ? ? ? A . n A 1 2 ASN 2 17 ? ? ? A . n A 1 3 ALA 3 18 ? ? ? A . n A 1 4 TYR 4 19 19 TYR TYR A . n A 1 5 ASN 5 20 20 ASN ASN A . n A 1 6 LEU 6 21 21 LEU LEU A . n A 1 7 GLN 7 22 22 GLN GLN A . n A 1 8 MSE 8 23 23 MSE MSE A . n A 1 9 ASP 9 24 24 ASP ASP A . n A 1 10 ILE 10 25 25 ILE ILE A . n A 1 11 PRO 11 26 26 PRO PRO A . n A 1 12 HIS 12 27 27 HIS HIS A . n A 1 13 ALA 13 28 28 ALA ALA A . n A 1 14 PRO 14 29 29 PRO PRO A . n A 1 15 THR 15 30 30 THR THR A . n A 1 16 VAL 16 31 31 VAL VAL A . n A 1 17 VAL 17 32 32 VAL VAL A . n A 1 18 LEU 18 33 33 LEU LEU A . n A 1 19 THR 19 34 34 THR THR A . n A 1 20 VAL 20 35 35 VAL VAL A . n A 1 21 GLN 21 36 36 GLN GLN A . n A 1 22 ASP 22 37 37 ASP ASP A . n A 1 23 LEU 23 38 38 LEU LEU A . n A 1 24 GLU 24 39 39 GLU GLU A . n A 1 25 GLN 25 40 40 GLN GLN A . n A 1 26 MSE 26 41 41 MSE MSE A . n A 1 27 GLU 27 42 42 GLU GLU A . n A 1 28 ALA 28 43 43 ALA ALA A . n A 1 29 THR 29 44 44 THR THR A . n A 1 30 GLN 30 45 45 GLN GLN A . n A 1 31 TYR 31 46 46 TYR TYR A . n A 1 32 THR 32 47 47 THR THR A . n A 1 33 THR 33 48 48 THR THR A . n A 1 34 MSE 34 49 49 MSE MSE A . n A 1 35 LEU 35 50 50 LEU LEU A . n A 1 36 PRO 36 51 51 PRO PRO A . n A 1 37 TRP 37 52 52 TRP TRP A . n A 1 38 LEU 38 53 53 LEU LEU A . n A 1 39 SER 39 54 54 SER SER A . n A 1 40 ALA 40 55 55 ALA ALA A . n A 1 41 PRO 41 56 56 PRO PRO A . n A 1 42 ALA 42 57 57 ALA ALA A . n A 1 43 THR 43 58 58 THR THR A . n A 1 44 PHE 44 59 59 PHE PHE A . n A 1 45 THR 45 60 60 THR THR A . n A 1 46 GLY 46 61 61 GLY GLY A . n A 1 47 VAL 47 62 62 VAL VAL A . n A 1 48 LYS 48 63 63 LYS LYS A . n A 1 49 LEU 49 64 64 LEU LEU A . n A 1 50 SER 50 65 65 SER SER A . n A 1 51 THR 51 66 66 THR THR A . n A 1 52 LEU 52 67 67 LEU LEU A . n A 1 53 LEU 53 68 68 LEU LEU A . n A 1 54 SER 54 69 69 SER SER A . n A 1 55 GLN 55 70 70 GLN GLN A . n A 1 56 GLN 56 71 71 GLN GLN A . n A 1 57 TYR 57 72 72 TYR TYR A . n A 1 58 GLY 58 73 73 GLY GLY A . n A 1 59 PHE 59 74 74 PHE PHE A . n A 1 60 ILE 60 75 75 ILE ILE A . n A 1 61 PRO 61 76 76 PRO PRO A . n A 1 62 ASN 62 77 77 ASN ASN A . n A 1 63 ARG 63 78 78 ARG ARG A . n A 1 64 VAL 64 79 79 VAL VAL A . n A 1 65 THR 65 80 80 THR THR A . n A 1 66 LEU 66 81 81 LEU LEU A . n A 1 67 ARG 67 82 82 ARG ARG A . n A 1 68 ALA 68 83 83 ALA ALA A . n A 1 69 LEU 69 84 84 LEU LEU A . n A 1 70 ASN 70 85 85 ASN ASN A . n A 1 71 ASP 71 86 86 ASP ASP A . n A 1 72 TYR 72 87 87 TYR TYR A . n A 1 73 ALA 73 88 88 ALA ALA A . n A 1 74 ALA 74 89 89 ALA ALA A . n A 1 75 ASP 75 90 90 ASP ASP A . n A 1 76 ILE 76 91 91 ILE ILE A . n A 1 77 ASP 77 92 92 ASP ASP A . n A 1 78 LEU 78 93 93 LEU LEU A . n A 1 79 SER 79 94 94 SER SER A . n A 1 80 ASP 80 95 95 ASP ASP A . n A 1 81 ILE 81 96 96 ILE ILE A . n A 1 82 GLU 82 97 97 GLU GLU A . n A 1 83 LYS 83 98 98 LYS LYS A . n A 1 84 TYR 84 99 99 TYR TYR A . n A 1 85 GLN 85 100 100 GLN GLN A . n A 1 86 PRO 86 101 101 PRO PRO A . n A 1 87 ILE 87 102 102 ILE ILE A . n A 1 88 VAL 88 103 103 VAL VAL A . n A 1 89 ALA 89 104 104 ALA ALA A . n A 1 90 TYR 90 105 105 TYR TYR A . n A 1 91 ARG 91 106 106 ARG ARG A . n A 1 92 GLN 92 107 107 GLN GLN A . n A 1 93 ASP 93 108 108 ASP ASP A . n A 1 94 GLY 94 109 109 GLY GLY A . n A 1 95 LYS 95 110 110 LYS LYS A . n A 1 96 PRO 96 111 111 PRO PRO A . n A 1 97 MSE 97 112 112 MSE MSE A . n A 1 98 ARG 98 113 113 ARG ARG A . n A 1 99 VAL 99 114 114 VAL VAL A . n A 1 100 ARG 100 115 115 ARG ARG A . n A 1 101 ASP 101 116 116 ASP ASP A . n A 1 102 LYS 102 117 117 LYS LYS A . n A 1 103 GLY 103 118 118 GLY GLY A . n A 1 104 PRO 104 119 119 PRO PRO A . n A 1 105 PHE 105 120 120 PHE PHE A . n A 1 106 TRP 106 121 121 TRP TRP A . n A 1 107 LEU 107 122 122 LEU LEU A . n A 1 108 ILE 108 123 123 ILE ILE A . n A 1 109 TYR 109 124 124 TYR TYR A . n A 1 110 PRO 110 125 125 PRO PRO A . n A 1 111 GLN 111 126 126 GLN GLN A . n A 1 112 SER 112 127 127 SER SER A . n A 1 113 SER 113 128 128 SER SER A . n A 1 114 PHE 114 129 129 PHE PHE A . n A 1 115 PRO 115 130 130 PRO PRO A . n A 1 116 LYS 116 131 131 LYS LYS A . n A 1 117 GLU 117 132 132 GLU GLU A . n A 1 118 LEU 118 133 133 LEU LEU A . n A 1 119 ASN 119 134 134 ASN ASN A . n A 1 120 ASN 120 135 135 ASN ASN A . n A 1 121 GLU 121 136 136 GLU GLU A . n A 1 122 ARG 122 137 137 ARG ARG A . n A 1 123 TYR 123 138 138 TYR TYR A . n A 1 124 HIS 124 139 139 HIS HIS A . n A 1 125 SER 125 140 140 SER SER A . n A 1 126 GLN 126 141 141 GLN GLN A . n A 1 127 MSE 127 142 142 MSE MSE A . n A 1 128 VAL 128 143 143 VAL VAL A . n A 1 129 TRP 129 144 144 TRP TRP A . n A 1 130 GLN 130 145 145 GLN GLN A . n A 1 131 LEU 131 146 146 LEU LEU A . n A 1 132 LYS 132 147 147 LYS LYS A . n A 1 133 GLN 133 148 148 GLN GLN A . n A 1 134 ILE 134 149 149 ILE ILE A . n A 1 135 HIS 135 150 150 HIS HIS A . n A 1 136 ILE 136 151 151 ILE ILE A . n A 1 137 ALA 137 152 152 ALA ALA A . n A 1 138 LYS 138 153 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NIAID, National Institute of Allergy and Infectious Diseases' _pdbx_SG_project.full_name_of_center 'Center for Structural Genomics of Infectious Diseases' _pdbx_SG_project.initial_of_center CSGID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMT 1 201 1 FMT FMT A . C 2 FMT 1 202 2 FMT FMT A . D 3 NA 1 203 3 NA NA A . E 4 HOH 1 301 143 HOH HOH A . E 4 HOH 2 302 81 HOH HOH A . E 4 HOH 3 303 187 HOH HOH A . E 4 HOH 4 304 162 HOH HOH A . E 4 HOH 5 305 181 HOH HOH A . E 4 HOH 6 306 47 HOH HOH A . E 4 HOH 7 307 99 HOH HOH A . E 4 HOH 8 308 137 HOH HOH A . E 4 HOH 9 309 135 HOH HOH A . E 4 HOH 10 310 136 HOH HOH A . E 4 HOH 11 311 138 HOH HOH A . E 4 HOH 12 312 98 HOH HOH A . E 4 HOH 13 313 186 HOH HOH A . E 4 HOH 14 314 174 HOH HOH A . E 4 HOH 15 315 20 HOH HOH A . E 4 HOH 16 316 208 HOH HOH A . E 4 HOH 17 317 107 HOH HOH A . E 4 HOH 18 318 170 HOH HOH A . E 4 HOH 19 319 25 HOH HOH A . E 4 HOH 20 320 189 HOH HOH A . E 4 HOH 21 321 177 HOH HOH A . E 4 HOH 22 322 132 HOH HOH A . E 4 HOH 23 323 28 HOH HOH A . E 4 HOH 24 324 26 HOH HOH A . E 4 HOH 25 325 105 HOH HOH A . E 4 HOH 26 326 102 HOH HOH A . E 4 HOH 27 327 120 HOH HOH A . E 4 HOH 28 328 61 HOH HOH A . E 4 HOH 29 329 124 HOH HOH A . E 4 HOH 30 330 191 HOH HOH A . E 4 HOH 31 331 73 HOH HOH A . E 4 HOH 32 332 118 HOH HOH A . E 4 HOH 33 333 21 HOH HOH A . E 4 HOH 34 334 113 HOH HOH A . E 4 HOH 35 335 166 HOH HOH A . E 4 HOH 36 336 43 HOH HOH A . E 4 HOH 37 337 49 HOH HOH A . E 4 HOH 38 338 33 HOH HOH A . E 4 HOH 39 339 14 HOH HOH A . E 4 HOH 40 340 179 HOH HOH A . E 4 HOH 41 341 130 HOH HOH A . E 4 HOH 42 342 32 HOH HOH A . E 4 HOH 43 343 65 HOH HOH A . E 4 HOH 44 344 9 HOH HOH A . E 4 HOH 45 345 63 HOH HOH A . E 4 HOH 46 346 74 HOH HOH A . E 4 HOH 47 347 11 HOH HOH A . E 4 HOH 48 348 4 HOH HOH A . E 4 HOH 49 349 140 HOH HOH A . E 4 HOH 50 350 172 HOH HOH A . E 4 HOH 51 351 89 HOH HOH A . E 4 HOH 52 352 75 HOH HOH A . E 4 HOH 53 353 60 HOH HOH A . E 4 HOH 54 354 23 HOH HOH A . E 4 HOH 55 355 6 HOH HOH A . E 4 HOH 56 356 128 HOH HOH A . E 4 HOH 57 357 86 HOH HOH A . E 4 HOH 58 358 151 HOH HOH A . E 4 HOH 59 359 171 HOH HOH A . E 4 HOH 60 360 77 HOH HOH A . E 4 HOH 61 361 70 HOH HOH A . E 4 HOH 62 362 46 HOH HOH A . E 4 HOH 63 363 19 HOH HOH A . E 4 HOH 64 364 76 HOH HOH A . E 4 HOH 65 365 103 HOH HOH A . E 4 HOH 66 366 185 HOH HOH A . E 4 HOH 67 367 100 HOH HOH A . E 4 HOH 68 368 7 HOH HOH A . E 4 HOH 69 369 156 HOH HOH A . E 4 HOH 70 370 134 HOH HOH A . E 4 HOH 71 371 82 HOH HOH A . E 4 HOH 72 372 16 HOH HOH A . E 4 HOH 73 373 31 HOH HOH A . E 4 HOH 74 374 55 HOH HOH A . E 4 HOH 75 375 24 HOH HOH A . E 4 HOH 76 376 169 HOH HOH A . E 4 HOH 77 377 91 HOH HOH A . E 4 HOH 78 378 48 HOH HOH A . E 4 HOH 79 379 131 HOH HOH A . E 4 HOH 80 380 146 HOH HOH A . E 4 HOH 81 381 83 HOH HOH A . E 4 HOH 82 382 12 HOH HOH A . E 4 HOH 83 383 15 HOH HOH A . E 4 HOH 84 384 27 HOH HOH A . E 4 HOH 85 385 165 HOH HOH A . E 4 HOH 86 386 58 HOH HOH A . E 4 HOH 87 387 154 HOH HOH A . E 4 HOH 88 388 192 HOH HOH A . E 4 HOH 89 389 67 HOH HOH A . E 4 HOH 90 390 184 HOH HOH A . E 4 HOH 91 391 35 HOH HOH A . E 4 HOH 92 392 18 HOH HOH A . E 4 HOH 93 393 38 HOH HOH A . E 4 HOH 94 394 153 HOH HOH A . E 4 HOH 95 395 37 HOH HOH A . E 4 HOH 96 396 84 HOH HOH A . E 4 HOH 97 397 147 HOH HOH A . E 4 HOH 98 398 56 HOH HOH A . E 4 HOH 99 399 123 HOH HOH A . E 4 HOH 100 400 50 HOH HOH A . E 4 HOH 101 401 57 HOH HOH A . E 4 HOH 102 402 53 HOH HOH A . E 4 HOH 103 403 40 HOH HOH A . E 4 HOH 104 404 111 HOH HOH A . E 4 HOH 105 405 90 HOH HOH A . E 4 HOH 106 406 173 HOH HOH A . E 4 HOH 107 407 199 HOH HOH A . E 4 HOH 108 408 133 HOH HOH A . E 4 HOH 109 409 141 HOH HOH A . E 4 HOH 110 410 101 HOH HOH A . E 4 HOH 111 411 180 HOH HOH A . E 4 HOH 112 412 159 HOH HOH A . E 4 HOH 113 413 85 HOH HOH A . E 4 HOH 114 414 41 HOH HOH A . E 4 HOH 115 415 72 HOH HOH A . E 4 HOH 116 416 44 HOH HOH A . E 4 HOH 117 417 96 HOH HOH A . E 4 HOH 118 418 139 HOH HOH A . E 4 HOH 119 419 195 HOH HOH A . E 4 HOH 120 420 68 HOH HOH A . E 4 HOH 121 421 71 HOH HOH A . E 4 HOH 122 422 22 HOH HOH A . E 4 HOH 123 423 78 HOH HOH A . E 4 HOH 124 424 5 HOH HOH A . E 4 HOH 125 425 194 HOH HOH A . E 4 HOH 126 426 144 HOH HOH A . E 4 HOH 127 427 34 HOH HOH A . E 4 HOH 128 428 42 HOH HOH A . E 4 HOH 129 429 110 HOH HOH A . E 4 HOH 130 430 112 HOH HOH A . E 4 HOH 131 431 94 HOH HOH A . E 4 HOH 132 432 17 HOH HOH A . E 4 HOH 133 433 198 HOH HOH A . E 4 HOH 134 434 116 HOH HOH A . E 4 HOH 135 435 66 HOH HOH A . E 4 HOH 136 436 161 HOH HOH A . E 4 HOH 137 437 59 HOH HOH A . E 4 HOH 138 438 164 HOH HOH A . E 4 HOH 139 439 10 HOH HOH A . E 4 HOH 140 440 54 HOH HOH A . E 4 HOH 141 441 97 HOH HOH A . E 4 HOH 142 442 129 HOH HOH A . E 4 HOH 143 443 119 HOH HOH A . E 4 HOH 144 444 200 HOH HOH A . E 4 HOH 145 445 182 HOH HOH A . E 4 HOH 146 446 51 HOH HOH A . E 4 HOH 147 447 115 HOH HOH A . E 4 HOH 148 448 158 HOH HOH A . E 4 HOH 149 449 125 HOH HOH A . E 4 HOH 150 450 201 HOH HOH A . E 4 HOH 151 451 178 HOH HOH A . E 4 HOH 152 452 193 HOH HOH A . E 4 HOH 153 453 160 HOH HOH A . E 4 HOH 154 454 150 HOH HOH A . E 4 HOH 155 455 197 HOH HOH A . E 4 HOH 156 456 87 HOH HOH A . E 4 HOH 157 457 79 HOH HOH A . E 4 HOH 158 458 80 HOH HOH A . E 4 HOH 159 459 117 HOH HOH A . E 4 HOH 160 460 149 HOH HOH A . E 4 HOH 161 461 168 HOH HOH A . E 4 HOH 162 462 88 HOH HOH A . E 4 HOH 163 463 30 HOH HOH A . E 4 HOH 164 464 39 HOH HOH A . E 4 HOH 165 465 93 HOH HOH A . E 4 HOH 166 466 122 HOH HOH A . E 4 HOH 167 467 109 HOH HOH A . E 4 HOH 168 468 36 HOH HOH A . E 4 HOH 169 469 167 HOH HOH A . E 4 HOH 170 470 29 HOH HOH A . E 4 HOH 171 471 106 HOH HOH A . E 4 HOH 172 472 142 HOH HOH A . E 4 HOH 173 473 206 HOH HOH A . E 4 HOH 174 474 188 HOH HOH A . E 4 HOH 175 475 62 HOH HOH A . E 4 HOH 176 476 152 HOH HOH A . E 4 HOH 177 477 108 HOH HOH A . E 4 HOH 178 478 95 HOH HOH A . E 4 HOH 179 479 155 HOH HOH A . E 4 HOH 180 480 69 HOH HOH A . E 4 HOH 181 481 45 HOH HOH A . E 4 HOH 182 482 13 HOH HOH A . E 4 HOH 183 483 183 HOH HOH A . E 4 HOH 184 484 190 HOH HOH A . E 4 HOH 185 485 8 HOH HOH A . E 4 HOH 186 486 104 HOH HOH A . E 4 HOH 187 487 202 HOH HOH A . E 4 HOH 188 488 145 HOH HOH A . E 4 HOH 189 489 207 HOH HOH A . E 4 HOH 190 490 64 HOH HOH A . E 4 HOH 191 491 196 HOH HOH A . E 4 HOH 192 492 163 HOH HOH A . E 4 HOH 193 493 175 HOH HOH A . E 4 HOH 194 494 176 HOH HOH A . E 4 HOH 195 495 121 HOH HOH A . E 4 HOH 196 496 92 HOH HOH A . E 4 HOH 197 497 203 HOH HOH A . E 4 HOH 198 498 114 HOH HOH A . E 4 HOH 199 499 157 HOH HOH A . E 4 HOH 200 500 148 HOH HOH A . E 4 HOH 201 501 204 HOH HOH A . E 4 HOH 202 502 52 HOH HOH A . E 4 HOH 203 503 210 HOH HOH A . E 4 HOH 204 504 205 HOH HOH A . E 4 HOH 205 505 209 HOH HOH A . E 4 HOH 206 506 127 HOH HOH A . E 4 HOH 207 507 126 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 8 A MSE 23 ? MET 'modified residue' 2 A MSE 26 A MSE 41 ? MET 'modified residue' 3 A MSE 34 A MSE 49 ? MET 'modified residue' 4 A MSE 97 A MSE 112 ? MET 'modified residue' 5 A MSE 127 A MSE 142 ? MET 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 320 ? E HOH . 2 1 A HOH 327 ? E HOH . 3 1 A HOH 438 ? E HOH . 4 1 A HOH 461 ? E HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG A A SER 125 ? A SER 140 ? 1_555 NA A D NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 324 ? 1_555 91.5 ? 2 OG A A SER 125 ? A SER 140 ? 1_555 NA A D NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 367 ? 1_555 94.9 ? 3 O ? E HOH . ? A HOH 324 ? 1_555 NA A D NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 367 ? 1_555 81.1 ? 4 OG A A SER 125 ? A SER 140 ? 1_555 NA A D NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 373 ? 1_555 85.5 ? 5 O ? E HOH . ? A HOH 324 ? 1_555 NA A D NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 373 ? 1_555 164.5 ? 6 O ? E HOH . ? A HOH 367 ? 1_555 NA A D NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 373 ? 1_555 84.0 ? 7 OG A A SER 125 ? A SER 140 ? 1_555 NA A D NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 440 ? 1_555 82.3 ? 8 O ? E HOH . ? A HOH 324 ? 1_555 NA A D NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 440 ? 1_555 97.0 ? 9 O ? E HOH . ? A HOH 367 ? 1_555 NA A D NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 440 ? 1_555 176.6 ? 10 O ? E HOH . ? A HOH 373 ? 1_555 NA A D NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 440 ? 1_555 97.6 ? 11 OG A A SER 125 ? A SER 140 ? 1_555 NA A D NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 499 ? 1_555 170.2 ? 12 O ? E HOH . ? A HOH 324 ? 1_555 NA A D NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 499 ? 1_555 90.9 ? 13 O ? E HOH . ? A HOH 367 ? 1_555 NA A D NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 499 ? 1_555 94.9 ? 14 O ? E HOH . ? A HOH 373 ? 1_555 NA A D NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 499 ? 1_555 94.7 ? 15 O ? E HOH . ? A HOH 440 ? 1_555 NA A D NA . ? A NA 203 ? 1_555 O ? E HOH . ? A HOH 499 ? 1_555 87.9 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2021-11-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 4.2972 18.4031 41.8908 0.0213 ? 0.0022 ? -0.0056 ? 0.0178 ? -0.0009 ? 0.0041 ? 0.7399 ? 0.3396 ? -0.2154 ? 0.6736 ? -0.0769 ? 0.4673 ? -0.0121 ? -0.0011 ? -0.0278 ? 0.0236 ? -0.0092 ? -0.0166 ? 0.0307 ? -0.0039 ? 0.0213 ? 2 'X-RAY DIFFRACTION' ? refined 11.5010 11.6604 42.7019 0.0339 ? -0.0068 ? -0.0078 ? 0.0193 ? 0.0101 ? 0.0250 ? 0.9209 ? -0.0231 ? 0.6232 ? 0.9577 ? 0.6881 ? 2.2548 ? 0.0460 ? -0.0367 ? -0.1271 ? 0.0977 ? 0.0088 ? -0.0181 ? 0.1967 ? -0.0446 ? -0.0547 ? 3 'X-RAY DIFFRACTION' ? refined 11.4074 22.8454 38.5822 0.0233 ? -0.0016 ? -0.0026 ? 0.0115 ? 0.0010 ? 0.0015 ? 0.8243 ? 0.0160 ? 0.0372 ? 0.2535 ? 0.1535 ? 0.1363 ? -0.0120 ? 0.0146 ? 0.0130 ? -0.0045 ? 0.0072 ? -0.0044 ? -0.0096 ? 0.0107 ? 0.0048 ? 4 'X-RAY DIFFRACTION' ? refined 9.4190 8.6351 38.8950 0.0223 ? -0.0008 ? 0.0026 ? 0.0123 ? 0.0055 ? 0.0228 ? 4.5041 ? -2.5765 ? 3.1815 ? 4.3649 ? -2.1068 ? 3.2879 ? 0.1024 ? -0.0237 ? -0.2086 ? -0.0175 ? -0.0307 ? -0.0131 ? 0.1278 ? -0.0049 ? -0.0717 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 19 ? ? ? A 62 ? ? ? 2 'X-RAY DIFFRACTION' 2 ? ? A 63 ? ? ? A 90 ? ? ? 3 'X-RAY DIFFRACTION' 3 ? ? A 91 ? ? ? A 145 ? ? ? 4 'X-RAY DIFFRACTION' 4 ? ? A 146 ? ? ? A 152 ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0238 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 5 # _pdbx_entry_details.entry_id 7KOM _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 116 ? ? -102.22 -100.69 2 1 ASP A 116 ? ? -102.22 -103.55 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 16 ? A SER 1 2 1 Y 1 A ASN 17 ? A ASN 2 3 1 Y 1 A ALA 18 ? A ALA 3 4 1 Y 1 A LYS 153 ? A LYS 138 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FORMIC ACID' FMT 3 'SODIUM ION' NA 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #