data_7LUX # _entry.id 7LUX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7LUX pdb_00007lux 10.2210/pdb7lux/pdb WWPDB D_1000255005 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-03-17 2 'Structure model' 1 1 2021-03-24 3 'Structure model' 1 2 2024-03-06 4 'Structure model' 1 3 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' citation 5 3 'Structure model' database_2 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_PubMed' 2 2 'Structure model' '_citation.title' 3 3 'Structure model' '_citation.journal_id_ISSN' 4 3 'Structure model' '_database_2.pdbx_DOI' 5 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7LUX _pdbx_database_status.recvd_initial_deposition_date 2021-02-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name PDB _pdbx_database_related.details 'same peptide, different crystal form' _pdbx_database_related.db_id 7LTU _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Lu, J.' 1 0000-0002-4941-3098 'Zee, C.-T.' 2 0000-0002-6630-706X 'Sawaya, M.R.' 3 0000-0003-0874-9043 'Rodriguez, J.A.' 4 0000-0001-8471-2504 'Eisenberg, D.S.' 5 0000-0003-2432-5419 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biorxiv _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2692-8205 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Inhibition of amyloid formation of the Nucleoprotein of SARS-CoV-2.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1101/2021.03.05.434000 _citation.pdbx_database_id_PubMed 33688654 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tayeb-Fligelman, E.' 1 ? primary 'Cheng, X.' 2 ? primary 'Tai, C.' 3 ? primary 'Bowler, J.T.' 4 ? primary 'Griner, S.' 5 ? primary 'Sawaya, M.R.' 6 ? primary 'Seidler, P.M.' 7 ? primary 'Jiang, Y.X.' 8 ? primary 'Lu, J.' 9 ? primary 'Rosenberg, G.M.' 10 ? primary 'Salwinski, L.' 11 ? primary 'Abskharon, R.' 12 ? primary 'Zee, C.T.' 13 ? primary 'Hou, K.' 14 ? primary 'Li, Y.' 15 ? primary 'Boyer, D.R.' 16 ? primary 'Murray, K.A.' 17 ? primary 'Falcon, G.' 18 ? primary 'Anderson, D.H.' 19 ? primary 'Cascio, D.' 20 ? primary 'Saelices, L.' 21 ? primary 'Damoiseaux, R.' 22 ? primary 'Guo, F.' 23 ? primary 'Eisenberg, D.S.' 24 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Nucleoprotein AALALL' 570.722 1 ? ? ? ? 2 non-polymer nat 'TETRAETHYLENE GLYCOL' 194.226 2 ? ? ? ? 3 water nat water 18.015 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'N,Nucleocapsid protein,NC,Protein N' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code AALALL _entity_poly.pdbx_seq_one_letter_code_can AALALL _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'TETRAETHYLENE GLYCOL' PG4 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ALA n 1 3 LEU n 1 4 ALA n 1 5 LEU n 1 6 LEU n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 6 _pdbx_entity_src_syn.organism_scientific 'Severe acute respiratory syndrome coronavirus 2' _pdbx_entity_src_syn.organism_common_name '2019-nCoV, SARS-CoV-2' _pdbx_entity_src_syn.ncbi_taxonomy_id 2697049 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PG4 non-polymer . 'TETRAETHYLENE GLYCOL' ? 'C8 H18 O5' 194.226 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 217 217 ALA ALA A . n A 1 2 ALA 2 218 218 ALA ALA A . n A 1 3 LEU 3 219 219 LEU LEU A . n A 1 4 ALA 4 220 220 ALA ALA A . n A 1 5 LEU 5 221 221 LEU LEU A . n A 1 6 LEU 6 222 222 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PG4 1 301 229 PG4 PG4 A . C 2 PG4 1 302 230 PG4 PG4 A . D 3 HOH 1 401 231 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0267 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 'Jan 31, 2020' 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? 'Jan 31, 2020' 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.8.3 4 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7LUX _cell.details ? _cell.formula_units_Z ? _cell.length_a 44.460 _cell.length_a_esd ? _cell.length_b 9.540 _cell.length_b_esd ? _cell.length_c 10.950 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LUX _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7LUX _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.03 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 39.54 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 9.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'polyethylene glycol 3000, CHES, pH 9.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-06-20 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si (111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 20.927 _reflns.entry_id 7LUX _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.300 _reflns.d_resolution_low 22.23 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 1234 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 93.000 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.781 _reflns.pdbx_Rmerge_I_obs 0.105 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 5.940 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.843 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.121 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.997 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 1.300 1.360 ? 1.800 ? ? ? ? 139 84.800 ? ? ? ? 0.808 ? ? ? ? ? ? ? ? 3.957 ? ? ? ? 0.922 ? ? 1 1 0.544 ? ? 1.360 1.430 ? 1.610 ? ? ? ? 134 97.800 ? ? ? ? 1.030 ? ? ? ? ? ? ? ? 3.948 ? ? ? ? 1.196 ? ? 2 1 0.562 ? ? 1.430 1.500 ? 2.440 ? ? ? ? 130 95.600 ? ? ? ? 0.641 ? ? ? ? ? ? ? ? 3.754 ? ? ? ? 0.738 ? ? 3 1 0.868 ? ? 1.500 1.600 ? 3.580 ? ? ? ? 137 89.000 ? ? ? ? 0.450 ? ? ? ? ? ? ? ? 3.912 ? ? ? ? 0.520 ? ? 4 1 0.881 ? ? 1.600 1.710 ? 3.770 ? ? ? ? 115 100.000 ? ? ? ? 0.358 ? ? ? ? ? ? ? ? 4.035 ? ? ? ? 0.407 ? ? 5 1 0.930 ? ? 1.710 1.840 ? 5.390 ? ? ? ? 126 100.000 ? ? ? ? 0.254 ? ? ? ? ? ? ? ? 3.627 ? ? ? ? 0.293 ? ? 6 1 0.937 ? ? 1.840 2.020 ? 8.450 ? ? ? ? 95 88.800 ? ? ? ? 0.129 ? ? ? ? ? ? ? ? 3.747 ? ? ? ? 0.148 ? ? 7 1 0.991 ? ? 2.020 2.260 ? 10.010 ? ? ? ? 99 97.100 ? ? ? ? 0.103 ? ? ? ? ? ? ? ? 3.828 ? ? ? ? 0.117 ? ? 8 1 0.995 ? ? 2.260 2.610 ? 10.150 ? ? ? ? 89 95.700 ? ? ? ? 0.103 ? ? ? ? ? ? ? ? 3.674 ? ? ? ? 0.121 ? ? 9 1 0.997 ? ? 2.610 3.190 ? 12.100 ? ? ? ? 79 94.000 ? ? ? ? 0.086 ? ? ? ? ? ? ? ? 3.418 ? ? ? ? 0.101 ? ? 10 1 0.985 ? ? 3.190 4.510 ? 14.610 ? ? ? ? 56 84.800 ? ? ? ? 0.060 ? ? ? ? ? ? ? ? 3.554 ? ? ? ? 0.070 ? ? 11 1 0.998 ? ? 4.510 22.23 ? 13.600 ? ? ? ? 35 81.400 ? ? ? ? 0.065 ? ? ? ? ? ? ? ? 3.171 ? ? ? ? 0.075 ? ? 12 1 0.997 ? ? # _refine.aniso_B[1][1] 0.451 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][2] -0.870 _refine.aniso_B[2][3] -0.000 _refine.aniso_B[3][3] 0.419 _refine.B_iso_max ? _refine.B_iso_mean 16.319 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.971 _refine.correlation_coeff_Fo_to_Fc_free 0.947 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7LUX _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.303 _refine.ls_d_res_low 22.230 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 1234 _refine.ls_number_reflns_R_free 124 _refine.ls_number_reflns_R_work 1110 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 92.992 _refine.ls_percent_reflns_R_free 10.049 _refine.ls_R_factor_all 0.199 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2360 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1948 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free 0.238 _refine.ls_wR_factor_R_work 0.205 _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'ideal beta strand AAAAA' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.076 _refine.pdbx_overall_ESU_R_Free 0.080 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 1.693 _refine.overall_SU_ML 0.061 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work 0.8549 _refine.pdbx_average_fsc_free 0.8374 # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.303 _refine_hist.d_res_low 22.230 _refine_hist.number_atoms_solvent 1 _refine_hist.number_atoms_total 67 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 40 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.006 0.014 63 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.017 84 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.179 1.619 75 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.869 1.565 194 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 7.102 5.000 5 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 5.506 15.000 6 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 0.045 0.200 6 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 0.020 43 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.000 0.020 5 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.127 0.200 34 ? r_symmetry_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.085 0.200 14 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.086 0.200 31 ? r_symmetry_nbtor_other ? ? 'X-RAY DIFFRACTION' ? 0.017 0.200 1 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.008 0.200 1 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.154 0.200 23 ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.079 0.200 3 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 1.649 1.172 23 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.458 1.129 22 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.714 1.702 27 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 2.735 1.736 28 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 1.833 1.879 40 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 1.811 1.889 41 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 3.021 2.651 48 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 2.990 2.665 49 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 4.505 11.309 21 ? r_lrange_it ? ? 'X-RAY DIFFRACTION' ? 4.406 12.489 22 ? r_lrange_other ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.303 1.337 96 . 8 74 85.4167 . 0.411 . 0.515 . 0.397 . . . . . 0.375 . 20 . 0.521 0.587 'X-RAY DIFFRACTION' 1.337 1.374 99 . 9 78 87.8788 . 0.382 . 0.650 . 0.353 . . . . . 0.338 . 20 . 0.628 0.477 'X-RAY DIFFRACTION' 1.374 1.413 77 . 8 67 97.4026 . 0.351 . 0.813 . 0.284 . . . . . 0.268 . 20 . 0.724 0.556 'X-RAY DIFFRACTION' 1.413 1.456 87 . 8 74 94.2529 . 0.323 . 0.138 . 0.344 . . . . . 0.287 . 20 . 0.747 0.703 'X-RAY DIFFRACTION' 1.456 1.504 78 . 8 69 98.7179 . 0.343 . 0.238 . 0.358 . . . . . 0.351 . 20 . 0.755 0.926 'X-RAY DIFFRACTION' 1.504 1.557 89 . 8 75 93.2584 . 0.281 . 0.559 . 0.262 . . . . . 0.257 . 20 . 0.880 0.774 'X-RAY DIFFRACTION' 1.557 1.615 86 . 7 68 87.2093 . 0.274 . 0.361 . 0.264 . . . . . 0.227 . 20 . 0.874 0.884 'X-RAY DIFFRACTION' 1.615 1.681 64 . 7 57 100.0000 . 0.236 . 0.117 . 0.253 . . . . . 0.210 . 20 . 0.887 0.924 'X-RAY DIFFRACTION' 1.681 1.755 71 . 7 64 100.0000 . 0.208 . 0.342 . 0.195 . . . . . 0.178 . 20 . 0.946 0.891 'X-RAY DIFFRACTION' 1.755 1.840 84 . 8 76 100.0000 . 0.205 . 0.237 . 0.202 . . . . . 0.178 . 20 . 0.944 0.967 'X-RAY DIFFRACTION' 1.840 1.939 61 . 6 47 86.8852 . 0.163 . 0.142 . 0.167 . . . . . 0.156 . 20 . 0.965 0.994 'X-RAY DIFFRACTION' 1.939 2.055 64 . 6 54 93.7500 . 0.189 . 0.177 . 0.190 . . . . . 0.177 . 20 . 0.962 0.952 'X-RAY DIFFRACTION' 2.055 2.196 66 . 6 58 96.9697 . 0.151 . 0.126 . 0.153 . . . . . 0.158 . 20 . 0.982 0.973 'X-RAY DIFFRACTION' 2.196 2.370 58 . 6 50 96.5517 . 0.173 . 0.202 . 0.169 . . . . . 0.183 . 20 . 0.977 0.972 'X-RAY DIFFRACTION' 2.370 2.593 51 . 4 44 94.1176 . 0.142 . 0.097 . 0.146 . . . . . 0.164 . 20 . 0.976 0.961 'X-RAY DIFFRACTION' 2.593 2.894 52 . 5 44 94.2308 . 0.178 . 0.163 . 0.180 . . . . . 0.169 . 20 . 0.967 0.983 'X-RAY DIFFRACTION' 2.894 3.333 46 . 5 39 95.6522 . 0.159 . 0.321 . 0.145 . . . . . 0.159 . 20 . 0.984 0.920 'X-RAY DIFFRACTION' 3.333 4.059 38 . 3 26 76.3158 . 0.135 . 0.106 . 0.137 . . . . . 0.156 . 20 . 0.987 0.979 'X-RAY DIFFRACTION' 4.059 5.647 39 . 3 29 82.0513 . 0.137 . 0.125 . 0.139 . . . . . 0.191 . 20 . 0.987 0.998 'X-RAY DIFFRACTION' 5.647 22.230 21 . 2 17 90.4762 . 0.301 . 0.414 . 0.286 . . . . . 0.515 . 20 . 0.943 0.960 # _struct.entry_id 7LUX _struct.title 'AALALL segment from the Nucleoprotein of SARS-CoV-2, residues 217-222, crystal form 2' _struct.pdbx_model_details 'Amyloid Fibril' _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7LUX _struct_keywords.text 'amyloid fibril, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NCAP_SARS2 _struct_ref.pdbx_db_accession P0DTC9 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code AALALL _struct_ref.pdbx_align_begin 217 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7LUX _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 6 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0DTC9 _struct_ref_seq.db_align_beg 217 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 222 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 217 _struct_ref_seq.pdbx_auth_seq_align_end 222 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octadecameric _pdbx_struct_assembly.oligomeric_count 18 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D 1 2 A,B,C,D 1 3 A,B,C,D 1 4 A,B,C,D 1 5 A,B,C,D 1 6 A,B,C,D 1 7 A,B,C,D 1 8 A,B,C,D 1 9 A,B,C,D 1 10 A,B,C,D 1 11 A,B,C,D 1 12 A,B,C,D 1 13 A,B,C,D 1 14 A,B,C,D 1 15 A,B,C,D 1 16 A,B,C,D 1 17 A,B,C,D 1 18 A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 1_545 x,y-1,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -9.5400000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 1_565 x,y+1,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 9.5400000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 1_535 x,y-2,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -19.0800000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 5 'crystal symmetry operation' 1_575 x,y+2,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 19.0800000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 6 'crystal symmetry operation' 1_556 x,y,z+1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 10.9500000000 7 'crystal symmetry operation' 1_546 x,y-1,z+1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -9.5400000000 0.0000000000 0.0000000000 1.0000000000 10.9500000000 8 'crystal symmetry operation' 1_566 x,y+1,z+1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 9.5400000000 0.0000000000 0.0000000000 1.0000000000 10.9500000000 9 'crystal symmetry operation' 1_536 x,y-2,z+1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -19.0800000000 0.0000000000 0.0000000000 1.0000000000 10.9500000000 10 'crystal symmetry operation' 1_576 x,y+2,z+1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 19.0800000000 0.0000000000 0.0000000000 1.0000000000 10.9500000000 11 'crystal symmetry operation' 3_546 -x+1/2,y-1/2,-z+1 -1.0000000000 0.0000000000 0.0000000000 22.2300000000 0.0000000000 1.0000000000 0.0000000000 -4.7700000000 0.0000000000 0.0000000000 -1.0000000000 10.9500000000 12 'crystal symmetry operation' 3_556 -x+1/2,y+1/2,-z+1 -1.0000000000 0.0000000000 0.0000000000 22.2300000000 0.0000000000 1.0000000000 0.0000000000 4.7700000000 0.0000000000 0.0000000000 -1.0000000000 10.9500000000 13 'crystal symmetry operation' 3_536 -x+1/2,y-3/2,-z+1 -1.0000000000 0.0000000000 0.0000000000 22.2300000000 0.0000000000 1.0000000000 0.0000000000 -14.3100000000 0.0000000000 0.0000000000 -1.0000000000 10.9500000000 14 'crystal symmetry operation' 3_566 -x+1/2,y+3/2,-z+1 -1.0000000000 0.0000000000 0.0000000000 22.2300000000 0.0000000000 1.0000000000 0.0000000000 14.3100000000 0.0000000000 0.0000000000 -1.0000000000 10.9500000000 15 'crystal symmetry operation' 3_547 -x+1/2,y-1/2,-z+2 -1.0000000000 0.0000000000 0.0000000000 22.2300000000 0.0000000000 1.0000000000 0.0000000000 -4.7700000000 0.0000000000 0.0000000000 -1.0000000000 21.9000000000 16 'crystal symmetry operation' 3_557 -x+1/2,y+1/2,-z+2 -1.0000000000 0.0000000000 0.0000000000 22.2300000000 0.0000000000 1.0000000000 0.0000000000 4.7700000000 0.0000000000 0.0000000000 -1.0000000000 21.9000000000 17 'crystal symmetry operation' 3_537 -x+1/2,y-3/2,-z+2 -1.0000000000 0.0000000000 0.0000000000 22.2300000000 0.0000000000 1.0000000000 0.0000000000 -14.3100000000 0.0000000000 0.0000000000 -1.0000000000 21.9000000000 18 'crystal symmetry operation' 3_567 -x+1/2,y+3/2,-z+2 -1.0000000000 0.0000000000 0.0000000000 22.2300000000 0.0000000000 1.0000000000 0.0000000000 14.3100000000 0.0000000000 0.0000000000 -1.0000000000 21.9000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A PG4 302 ? C PG4 . 2 1 A HOH 401 ? D HOH . # _pdbx_phasing_MR.entry_id 7LUX _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 1.300 _pdbx_phasing_MR.d_res_low_rotation 44.490 _pdbx_phasing_MR.d_res_high_translation 1.300 _pdbx_phasing_MR.d_res_low_translation 44.490 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # _pdbx_entry_details.entry_id 7LUX _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 HOH O O N N 14 HOH H1 H N N 15 HOH H2 H N N 16 LEU N N N N 17 LEU CA C N S 18 LEU C C N N 19 LEU O O N N 20 LEU CB C N N 21 LEU CG C N N 22 LEU CD1 C N N 23 LEU CD2 C N N 24 LEU OXT O N N 25 LEU H H N N 26 LEU H2 H N N 27 LEU HA H N N 28 LEU HB2 H N N 29 LEU HB3 H N N 30 LEU HG H N N 31 LEU HD11 H N N 32 LEU HD12 H N N 33 LEU HD13 H N N 34 LEU HD21 H N N 35 LEU HD22 H N N 36 LEU HD23 H N N 37 LEU HXT H N N 38 PG4 O1 O N N 39 PG4 C1 C N N 40 PG4 C2 C N N 41 PG4 O2 O N N 42 PG4 C3 C N N 43 PG4 C4 C N N 44 PG4 O3 O N N 45 PG4 C5 C N N 46 PG4 C6 C N N 47 PG4 O4 O N N 48 PG4 C7 C N N 49 PG4 C8 C N N 50 PG4 O5 O N N 51 PG4 HO1 H N N 52 PG4 H11 H N N 53 PG4 H12 H N N 54 PG4 H21 H N N 55 PG4 H22 H N N 56 PG4 H31 H N N 57 PG4 H32 H N N 58 PG4 H41 H N N 59 PG4 H42 H N N 60 PG4 H51 H N N 61 PG4 H52 H N N 62 PG4 H61 H N N 63 PG4 H62 H N N 64 PG4 H71 H N N 65 PG4 H72 H N N 66 PG4 H81 H N N 67 PG4 H82 H N N 68 PG4 HO5 H N N 69 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 HOH O H1 sing N N 13 HOH O H2 sing N N 14 LEU N CA sing N N 15 LEU N H sing N N 16 LEU N H2 sing N N 17 LEU CA C sing N N 18 LEU CA CB sing N N 19 LEU CA HA sing N N 20 LEU C O doub N N 21 LEU C OXT sing N N 22 LEU CB CG sing N N 23 LEU CB HB2 sing N N 24 LEU CB HB3 sing N N 25 LEU CG CD1 sing N N 26 LEU CG CD2 sing N N 27 LEU CG HG sing N N 28 LEU CD1 HD11 sing N N 29 LEU CD1 HD12 sing N N 30 LEU CD1 HD13 sing N N 31 LEU CD2 HD21 sing N N 32 LEU CD2 HD22 sing N N 33 LEU CD2 HD23 sing N N 34 LEU OXT HXT sing N N 35 PG4 O1 C1 sing N N 36 PG4 O1 HO1 sing N N 37 PG4 C1 C2 sing N N 38 PG4 C1 H11 sing N N 39 PG4 C1 H12 sing N N 40 PG4 C2 O2 sing N N 41 PG4 C2 H21 sing N N 42 PG4 C2 H22 sing N N 43 PG4 O2 C3 sing N N 44 PG4 C3 C4 sing N N 45 PG4 C3 H31 sing N N 46 PG4 C3 H32 sing N N 47 PG4 C4 O3 sing N N 48 PG4 C4 H41 sing N N 49 PG4 C4 H42 sing N N 50 PG4 O3 C5 sing N N 51 PG4 C5 C6 sing N N 52 PG4 C5 H51 sing N N 53 PG4 C5 H52 sing N N 54 PG4 C6 O4 sing N N 55 PG4 C6 H61 sing N N 56 PG4 C6 H62 sing N N 57 PG4 O4 C7 sing N N 58 PG4 C7 C8 sing N N 59 PG4 C7 H71 sing N N 60 PG4 C7 H72 sing N N 61 PG4 C8 O5 sing N N 62 PG4 C8 H81 sing N N 63 PG4 C8 H82 sing N N 64 PG4 O5 HO5 sing N N 65 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Department of Energy (DOE, United States)' 'United States' DE-FC02-02ER63421 1 'National Science Foundation (NSF, United States)' 'United States' 'MCB 1616265' 2 'National Institutes of Health/National Institute on Aging (NIH/NIA)' 'United States' 'R01 AG048120' 3 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'ideal beta strand AAAAA' # _atom_sites.entry_id 7LUX _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.022492 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.104822 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.091324 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 C 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 H 0.493 10.511 0.323 26.126 0.140 3.142 0.041 57.800 N 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 O 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 # loop_