data_7NO2 # _entry.id 7NO2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7NO2 pdb_00007no2 10.2210/pdb7no2/pdb WWPDB D_1292114056 ? ? EMDB EMD-12487 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-04-21 2 'Structure model' 1 1 2021-06-09 3 'Structure model' 1 2 2024-07-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' em_3d_fitting_list 7 3 'Structure model' em_admin 8 3 'Structure model' pdbx_initial_refinement_model 9 3 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_citation_author.identifier_ORCID' 13 2 'Structure model' '_citation_author.name' 14 3 'Structure model' '_database_2.pdbx_DOI' 15 3 'Structure model' '_database_2.pdbx_database_accession' 16 3 'Structure model' '_em_3d_fitting_list.accession_code' 17 3 'Structure model' '_em_3d_fitting_list.initial_refinement_model_id' 18 3 'Structure model' '_em_3d_fitting_list.source_name' 19 3 'Structure model' '_em_3d_fitting_list.type' 20 3 'Structure model' '_em_admin.last_update' 21 3 'Structure model' '_pdbx_struct_oper_list.name' 22 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7NO2 _pdbx_database_status.recvd_initial_deposition_date 2021-02-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Structure of the mature RSV CA lattice: hexamer derived from tubes (C2-symmetric)' _pdbx_database_related.db_id EMD-12487 _pdbx_database_related.content_type 'associated EM volume' # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Obr, M.' 1 0000-0003-1756-6564 'Ricana, C.L.' 2 ? 'Nikulin, N.' 3 ? 'Feathers, J.-P.R.' 4 ? 'Klanschnig, M.' 5 ? 'Thader, A.' 6 ? 'Johnson, M.C.' 7 ? 'Vogt, V.M.' 8 ? 'Schur, F.K.M.' 9 0000-0003-4790-8078 'Dick, R.A.' 10 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 12 _citation.language ? _citation.page_first 3226 _citation.page_last 3226 _citation.title 'Structure of the mature Rous sarcoma virus lattice reveals a role for IP6 in the formation of the capsid hexamer.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-021-23506-0 _citation.pdbx_database_id_PubMed 34050170 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Obr, M.' 1 ? primary 'Ricana, C.L.' 2 0000-0002-9733-9136 primary 'Nikulin, N.' 3 ? primary 'Feathers, J.R.' 4 ? primary 'Klanschnig, M.' 5 ? primary 'Thader, A.' 6 ? primary 'Johnson, M.C.' 7 ? primary 'Vogt, V.M.' 8 ? primary 'Schur, F.K.M.' 9 0000-0003-4790-8078 primary 'Dick, R.A.' 10 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Capsid protein p27, alternate cleaved 1' _entity.formula_weight 24773.594 _entity.pdbx_number_of_molecules 3 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;PVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHDVTNLMRVILGPAPYALWMDAWGVQLQTV IAAATRDPRHPANGQGRGERTNLNRLKGLADGMVGNPQGQAALLRPGELVAITASALQAFREVARLAEPAGPWADIMQGP SESFVDFANRLIKAVEGSDLPPSARAPVIIDCFRQKSQPDIQQLIRTAPSTLTTPGEIIKYVLDRQKTA ; _entity_poly.pdbx_seq_one_letter_code_can ;PVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHDVTNLMRVILGPAPYALWMDAWGVQLQTV IAAATRDPRHPANGQGRGERTNLNRLKGLADGMVGNPQGQAALLRPGELVAITASALQAFREVARLAEPAGPWADIMQGP SESFVDFANRLIKAVEGSDLPPSARAPVIIDCFRQKSQPDIQQLIRTAPSTLTTPGEIIKYVLDRQKTA ; _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 VAL n 1 3 VAL n 1 4 ILE n 1 5 LYS n 1 6 THR n 1 7 GLU n 1 8 GLY n 1 9 PRO n 1 10 ALA n 1 11 TRP n 1 12 THR n 1 13 PRO n 1 14 LEU n 1 15 GLU n 1 16 PRO n 1 17 LYS n 1 18 LEU n 1 19 ILE n 1 20 THR n 1 21 ARG n 1 22 LEU n 1 23 ALA n 1 24 ASP n 1 25 THR n 1 26 VAL n 1 27 ARG n 1 28 THR n 1 29 LYS n 1 30 GLY n 1 31 LEU n 1 32 ARG n 1 33 SER n 1 34 PRO n 1 35 ILE n 1 36 THR n 1 37 MET n 1 38 ALA n 1 39 GLU n 1 40 VAL n 1 41 GLU n 1 42 ALA n 1 43 LEU n 1 44 MET n 1 45 SER n 1 46 SER n 1 47 PRO n 1 48 LEU n 1 49 LEU n 1 50 PRO n 1 51 HIS n 1 52 ASP n 1 53 VAL n 1 54 THR n 1 55 ASN n 1 56 LEU n 1 57 MET n 1 58 ARG n 1 59 VAL n 1 60 ILE n 1 61 LEU n 1 62 GLY n 1 63 PRO n 1 64 ALA n 1 65 PRO n 1 66 TYR n 1 67 ALA n 1 68 LEU n 1 69 TRP n 1 70 MET n 1 71 ASP n 1 72 ALA n 1 73 TRP n 1 74 GLY n 1 75 VAL n 1 76 GLN n 1 77 LEU n 1 78 GLN n 1 79 THR n 1 80 VAL n 1 81 ILE n 1 82 ALA n 1 83 ALA n 1 84 ALA n 1 85 THR n 1 86 ARG n 1 87 ASP n 1 88 PRO n 1 89 ARG n 1 90 HIS n 1 91 PRO n 1 92 ALA n 1 93 ASN n 1 94 GLY n 1 95 GLN n 1 96 GLY n 1 97 ARG n 1 98 GLY n 1 99 GLU n 1 100 ARG n 1 101 THR n 1 102 ASN n 1 103 LEU n 1 104 ASN n 1 105 ARG n 1 106 LEU n 1 107 LYS n 1 108 GLY n 1 109 LEU n 1 110 ALA n 1 111 ASP n 1 112 GLY n 1 113 MET n 1 114 VAL n 1 115 GLY n 1 116 ASN n 1 117 PRO n 1 118 GLN n 1 119 GLY n 1 120 GLN n 1 121 ALA n 1 122 ALA n 1 123 LEU n 1 124 LEU n 1 125 ARG n 1 126 PRO n 1 127 GLY n 1 128 GLU n 1 129 LEU n 1 130 VAL n 1 131 ALA n 1 132 ILE n 1 133 THR n 1 134 ALA n 1 135 SER n 1 136 ALA n 1 137 LEU n 1 138 GLN n 1 139 ALA n 1 140 PHE n 1 141 ARG n 1 142 GLU n 1 143 VAL n 1 144 ALA n 1 145 ARG n 1 146 LEU n 1 147 ALA n 1 148 GLU n 1 149 PRO n 1 150 ALA n 1 151 GLY n 1 152 PRO n 1 153 TRP n 1 154 ALA n 1 155 ASP n 1 156 ILE n 1 157 MET n 1 158 GLN n 1 159 GLY n 1 160 PRO n 1 161 SER n 1 162 GLU n 1 163 SER n 1 164 PHE n 1 165 VAL n 1 166 ASP n 1 167 PHE n 1 168 ALA n 1 169 ASN n 1 170 ARG n 1 171 LEU n 1 172 ILE n 1 173 LYS n 1 174 ALA n 1 175 VAL n 1 176 GLU n 1 177 GLY n 1 178 SER n 1 179 ASP n 1 180 LEU n 1 181 PRO n 1 182 PRO n 1 183 SER n 1 184 ALA n 1 185 ARG n 1 186 ALA n 1 187 PRO n 1 188 VAL n 1 189 ILE n 1 190 ILE n 1 191 ASP n 1 192 CYS n 1 193 PHE n 1 194 ARG n 1 195 GLN n 1 196 LYS n 1 197 SER n 1 198 GLN n 1 199 PRO n 1 200 ASP n 1 201 ILE n 1 202 GLN n 1 203 GLN n 1 204 LEU n 1 205 ILE n 1 206 ARG n 1 207 THR n 1 208 ALA n 1 209 PRO n 1 210 SER n 1 211 THR n 1 212 LEU n 1 213 THR n 1 214 THR n 1 215 PRO n 1 216 GLY n 1 217 GLU n 1 218 ILE n 1 219 ILE n 1 220 LYS n 1 221 TYR n 1 222 VAL n 1 223 LEU n 1 224 ASP n 1 225 ARG n 1 226 GLN n 1 227 LYS n 1 228 THR n 1 229 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 229 _entity_src_gen.gene_src_common_name RSV-PrC _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene gag _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'Prague C' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rous sarcoma virus (strain Prague C)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11888 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 ? ? ? A . n A 1 2 VAL 2 2 ? ? ? A . n A 1 3 VAL 3 3 ? ? ? A . n A 1 4 ILE 4 4 ? ? ? A . n A 1 5 LYS 5 5 ? ? ? A . n A 1 6 THR 6 6 ? ? ? A . n A 1 7 GLU 7 7 ? ? ? A . n A 1 8 GLY 8 8 ? ? ? A . n A 1 9 PRO 9 9 ? ? ? A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 TRP 11 11 11 TRP TRP A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 ARG 27 27 27 ARG ARG A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 MET 37 37 37 MET MET A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 MET 44 44 44 MET MET A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 HIS 51 51 51 HIS HIS A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 MET 57 57 57 MET MET A . n A 1 58 ARG 58 58 58 ARG ARG A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 PRO 63 63 63 PRO PRO A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 TYR 66 66 66 TYR TYR A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 TRP 69 69 69 TRP TRP A . n A 1 70 MET 70 70 70 MET MET A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 TRP 73 73 73 TRP TRP A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 GLN 76 76 76 GLN GLN A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 GLN 78 78 78 GLN GLN A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 PRO 88 88 88 PRO PRO A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 HIS 90 90 90 HIS HIS A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 ASN 93 93 93 ASN ASN A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 GLN 95 95 95 GLN GLN A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 ARG 97 97 97 ARG ARG A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 GLU 99 99 99 GLU GLU A . n A 1 100 ARG 100 100 100 ARG ARG A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 ASN 102 102 102 ASN ASN A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 ASN 104 104 104 ASN ASN A . n A 1 105 ARG 105 105 105 ARG ARG A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 ASP 111 111 111 ASP ASP A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 MET 113 113 113 MET MET A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 ASN 116 116 116 ASN ASN A . n A 1 117 PRO 117 117 117 PRO PRO A . n A 1 118 GLN 118 118 118 GLN GLN A . n A 1 119 GLY 119 119 119 GLY GLY A . n A 1 120 GLN 120 120 120 GLN GLN A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 PRO 126 126 126 PRO PRO A . n A 1 127 GLY 127 127 127 GLY GLY A . n A 1 128 GLU 128 128 128 GLU GLU A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 VAL 130 130 130 VAL VAL A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 THR 133 133 133 THR THR A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 SER 135 135 135 SER SER A . n A 1 136 ALA 136 136 136 ALA ALA A . n A 1 137 LEU 137 137 137 LEU LEU A . n A 1 138 GLN 138 138 138 GLN GLN A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 PHE 140 140 140 PHE PHE A . n A 1 141 ARG 141 141 141 ARG ARG A . n A 1 142 GLU 142 142 142 GLU GLU A . n A 1 143 VAL 143 143 143 VAL VAL A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 ARG 145 145 145 ARG ARG A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 ALA 147 147 147 ALA ALA A . n A 1 148 GLU 148 148 148 GLU GLU A . n A 1 149 PRO 149 149 149 PRO PRO A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 GLY 151 151 151 GLY GLY A . n A 1 152 PRO 152 152 152 PRO PRO A . n A 1 153 TRP 153 153 153 TRP TRP A . n A 1 154 ALA 154 154 154 ALA ALA A . n A 1 155 ASP 155 155 155 ASP ASP A . n A 1 156 ILE 156 156 156 ILE ILE A . n A 1 157 MET 157 157 157 MET MET A . n A 1 158 GLN 158 158 158 GLN GLN A . n A 1 159 GLY 159 159 159 GLY GLY A . n A 1 160 PRO 160 160 160 PRO PRO A . n A 1 161 SER 161 161 161 SER SER A . n A 1 162 GLU 162 162 162 GLU GLU A . n A 1 163 SER 163 163 163 SER SER A . n A 1 164 PHE 164 164 164 PHE PHE A . n A 1 165 VAL 165 165 165 VAL VAL A . n A 1 166 ASP 166 166 166 ASP ASP A . n A 1 167 PHE 167 167 167 PHE PHE A . n A 1 168 ALA 168 168 168 ALA ALA A . n A 1 169 ASN 169 169 169 ASN ASN A . n A 1 170 ARG 170 170 170 ARG ARG A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 ILE 172 172 172 ILE ILE A . n A 1 173 LYS 173 173 173 LYS LYS A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 VAL 175 175 175 VAL VAL A . n A 1 176 GLU 176 176 176 GLU GLU A . n A 1 177 GLY 177 177 177 GLY GLY A . n A 1 178 SER 178 178 178 SER SER A . n A 1 179 ASP 179 179 179 ASP ASP A . n A 1 180 LEU 180 180 180 LEU LEU A . n A 1 181 PRO 181 181 181 PRO PRO A . n A 1 182 PRO 182 182 182 PRO PRO A . n A 1 183 SER 183 183 183 SER SER A . n A 1 184 ALA 184 184 184 ALA ALA A . n A 1 185 ARG 185 185 185 ARG ARG A . n A 1 186 ALA 186 186 186 ALA ALA A . n A 1 187 PRO 187 187 187 PRO PRO A . n A 1 188 VAL 188 188 188 VAL VAL A . n A 1 189 ILE 189 189 189 ILE ILE A . n A 1 190 ILE 190 190 190 ILE ILE A . n A 1 191 ASP 191 191 191 ASP ASP A . n A 1 192 CYS 192 192 192 CYS CYS A . n A 1 193 PHE 193 193 193 PHE PHE A . n A 1 194 ARG 194 194 194 ARG ARG A . n A 1 195 GLN 195 195 195 GLN GLN A . n A 1 196 LYS 196 196 196 LYS LYS A . n A 1 197 SER 197 197 197 SER SER A . n A 1 198 GLN 198 198 198 GLN GLN A . n A 1 199 PRO 199 199 199 PRO PRO A . n A 1 200 ASP 200 200 200 ASP ASP A . n A 1 201 ILE 201 201 201 ILE ILE A . n A 1 202 GLN 202 202 202 GLN GLN A . n A 1 203 GLN 203 203 203 GLN GLN A . n A 1 204 LEU 204 204 204 LEU LEU A . n A 1 205 ILE 205 205 205 ILE ILE A . n A 1 206 ARG 206 206 206 ARG ARG A . n A 1 207 THR 207 207 207 THR THR A . n A 1 208 ALA 208 208 208 ALA ALA A . n A 1 209 PRO 209 209 209 PRO PRO A . n A 1 210 SER 210 210 210 SER SER A . n A 1 211 THR 211 211 211 THR THR A . n A 1 212 LEU 212 212 212 LEU LEU A . n A 1 213 THR 213 213 213 THR THR A . n A 1 214 THR 214 214 214 THR THR A . n A 1 215 PRO 215 215 215 PRO PRO A . n A 1 216 GLY 216 216 216 GLY GLY A . n A 1 217 GLU 217 217 217 GLU GLU A . n A 1 218 ILE 218 218 218 ILE ILE A . n A 1 219 ILE 219 219 219 ILE ILE A . n A 1 220 LYS 220 220 220 LYS LYS A . n A 1 221 TYR 221 221 221 TYR TYR A . n A 1 222 VAL 222 222 222 VAL VAL A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 ASP 224 224 224 ASP ASP A . n A 1 225 ARG 225 225 225 ARG ARG A . n A 1 226 GLN 226 226 226 GLN GLN A . n A 1 227 LYS 227 227 227 LYS LYS A . n A 1 228 THR 228 228 228 THR THR A . n A 1 229 ALA 229 229 229 ALA ALA A . n B 1 1 PRO 1 1 ? ? ? B . n B 1 2 VAL 2 2 ? ? ? B . n B 1 3 VAL 3 3 ? ? ? B . n B 1 4 ILE 4 4 ? ? ? B . n B 1 5 LYS 5 5 ? ? ? B . n B 1 6 THR 6 6 ? ? ? B . n B 1 7 GLU 7 7 ? ? ? B . n B 1 8 GLY 8 8 ? ? ? B . n B 1 9 PRO 9 9 ? ? ? B . n B 1 10 ALA 10 10 10 ALA ALA B . n B 1 11 TRP 11 11 11 TRP TRP B . n B 1 12 THR 12 12 12 THR THR B . n B 1 13 PRO 13 13 13 PRO PRO B . n B 1 14 LEU 14 14 14 LEU LEU B . n B 1 15 GLU 15 15 15 GLU GLU B . n B 1 16 PRO 16 16 16 PRO PRO B . n B 1 17 LYS 17 17 17 LYS LYS B . n B 1 18 LEU 18 18 18 LEU LEU B . n B 1 19 ILE 19 19 19 ILE ILE B . n B 1 20 THR 20 20 20 THR THR B . n B 1 21 ARG 21 21 21 ARG ARG B . n B 1 22 LEU 22 22 22 LEU LEU B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 ASP 24 24 24 ASP ASP B . n B 1 25 THR 25 25 25 THR THR B . n B 1 26 VAL 26 26 26 VAL VAL B . n B 1 27 ARG 27 27 27 ARG ARG B . n B 1 28 THR 28 28 28 THR THR B . n B 1 29 LYS 29 29 29 LYS LYS B . n B 1 30 GLY 30 30 30 GLY GLY B . n B 1 31 LEU 31 31 31 LEU LEU B . n B 1 32 ARG 32 32 32 ARG ARG B . n B 1 33 SER 33 33 33 SER SER B . n B 1 34 PRO 34 34 34 PRO PRO B . n B 1 35 ILE 35 35 35 ILE ILE B . n B 1 36 THR 36 36 36 THR THR B . n B 1 37 MET 37 37 37 MET MET B . n B 1 38 ALA 38 38 38 ALA ALA B . n B 1 39 GLU 39 39 39 GLU GLU B . n B 1 40 VAL 40 40 40 VAL VAL B . n B 1 41 GLU 41 41 41 GLU GLU B . n B 1 42 ALA 42 42 42 ALA ALA B . n B 1 43 LEU 43 43 43 LEU LEU B . n B 1 44 MET 44 44 44 MET MET B . n B 1 45 SER 45 45 45 SER SER B . n B 1 46 SER 46 46 46 SER SER B . n B 1 47 PRO 47 47 47 PRO PRO B . n B 1 48 LEU 48 48 48 LEU LEU B . n B 1 49 LEU 49 49 49 LEU LEU B . n B 1 50 PRO 50 50 50 PRO PRO B . n B 1 51 HIS 51 51 51 HIS HIS B . n B 1 52 ASP 52 52 52 ASP ASP B . n B 1 53 VAL 53 53 53 VAL VAL B . n B 1 54 THR 54 54 54 THR THR B . n B 1 55 ASN 55 55 55 ASN ASN B . n B 1 56 LEU 56 56 56 LEU LEU B . n B 1 57 MET 57 57 57 MET MET B . n B 1 58 ARG 58 58 58 ARG ARG B . n B 1 59 VAL 59 59 59 VAL VAL B . n B 1 60 ILE 60 60 60 ILE ILE B . n B 1 61 LEU 61 61 61 LEU LEU B . n B 1 62 GLY 62 62 62 GLY GLY B . n B 1 63 PRO 63 63 63 PRO PRO B . n B 1 64 ALA 64 64 64 ALA ALA B . n B 1 65 PRO 65 65 65 PRO PRO B . n B 1 66 TYR 66 66 66 TYR TYR B . n B 1 67 ALA 67 67 67 ALA ALA B . n B 1 68 LEU 68 68 68 LEU LEU B . n B 1 69 TRP 69 69 69 TRP TRP B . n B 1 70 MET 70 70 70 MET MET B . n B 1 71 ASP 71 71 71 ASP ASP B . n B 1 72 ALA 72 72 72 ALA ALA B . n B 1 73 TRP 73 73 73 TRP TRP B . n B 1 74 GLY 74 74 74 GLY GLY B . n B 1 75 VAL 75 75 75 VAL VAL B . n B 1 76 GLN 76 76 76 GLN GLN B . n B 1 77 LEU 77 77 77 LEU LEU B . n B 1 78 GLN 78 78 78 GLN GLN B . n B 1 79 THR 79 79 79 THR THR B . n B 1 80 VAL 80 80 80 VAL VAL B . n B 1 81 ILE 81 81 81 ILE ILE B . n B 1 82 ALA 82 82 82 ALA ALA B . n B 1 83 ALA 83 83 83 ALA ALA B . n B 1 84 ALA 84 84 84 ALA ALA B . n B 1 85 THR 85 85 85 THR THR B . n B 1 86 ARG 86 86 86 ARG ARG B . n B 1 87 ASP 87 87 87 ASP ASP B . n B 1 88 PRO 88 88 88 PRO PRO B . n B 1 89 ARG 89 89 89 ARG ARG B . n B 1 90 HIS 90 90 90 HIS HIS B . n B 1 91 PRO 91 91 91 PRO PRO B . n B 1 92 ALA 92 92 92 ALA ALA B . n B 1 93 ASN 93 93 93 ASN ASN B . n B 1 94 GLY 94 94 94 GLY GLY B . n B 1 95 GLN 95 95 95 GLN GLN B . n B 1 96 GLY 96 96 96 GLY GLY B . n B 1 97 ARG 97 97 97 ARG ARG B . n B 1 98 GLY 98 98 98 GLY GLY B . n B 1 99 GLU 99 99 99 GLU GLU B . n B 1 100 ARG 100 100 100 ARG ARG B . n B 1 101 THR 101 101 101 THR THR B . n B 1 102 ASN 102 102 102 ASN ASN B . n B 1 103 LEU 103 103 103 LEU LEU B . n B 1 104 ASN 104 104 104 ASN ASN B . n B 1 105 ARG 105 105 105 ARG ARG B . n B 1 106 LEU 106 106 106 LEU LEU B . n B 1 107 LYS 107 107 107 LYS LYS B . n B 1 108 GLY 108 108 108 GLY GLY B . n B 1 109 LEU 109 109 109 LEU LEU B . n B 1 110 ALA 110 110 110 ALA ALA B . n B 1 111 ASP 111 111 111 ASP ASP B . n B 1 112 GLY 112 112 112 GLY GLY B . n B 1 113 MET 113 113 113 MET MET B . n B 1 114 VAL 114 114 114 VAL VAL B . n B 1 115 GLY 115 115 115 GLY GLY B . n B 1 116 ASN 116 116 116 ASN ASN B . n B 1 117 PRO 117 117 117 PRO PRO B . n B 1 118 GLN 118 118 118 GLN GLN B . n B 1 119 GLY 119 119 119 GLY GLY B . n B 1 120 GLN 120 120 120 GLN GLN B . n B 1 121 ALA 121 121 121 ALA ALA B . n B 1 122 ALA 122 122 122 ALA ALA B . n B 1 123 LEU 123 123 123 LEU LEU B . n B 1 124 LEU 124 124 124 LEU LEU B . n B 1 125 ARG 125 125 125 ARG ARG B . n B 1 126 PRO 126 126 126 PRO PRO B . n B 1 127 GLY 127 127 127 GLY GLY B . n B 1 128 GLU 128 128 128 GLU GLU B . n B 1 129 LEU 129 129 129 LEU LEU B . n B 1 130 VAL 130 130 130 VAL VAL B . n B 1 131 ALA 131 131 131 ALA ALA B . n B 1 132 ILE 132 132 132 ILE ILE B . n B 1 133 THR 133 133 133 THR THR B . n B 1 134 ALA 134 134 134 ALA ALA B . n B 1 135 SER 135 135 135 SER SER B . n B 1 136 ALA 136 136 136 ALA ALA B . n B 1 137 LEU 137 137 137 LEU LEU B . n B 1 138 GLN 138 138 138 GLN GLN B . n B 1 139 ALA 139 139 139 ALA ALA B . n B 1 140 PHE 140 140 140 PHE PHE B . n B 1 141 ARG 141 141 141 ARG ARG B . n B 1 142 GLU 142 142 142 GLU GLU B . n B 1 143 VAL 143 143 143 VAL VAL B . n B 1 144 ALA 144 144 144 ALA ALA B . n B 1 145 ARG 145 145 145 ARG ARG B . n B 1 146 LEU 146 146 146 LEU LEU B . n B 1 147 ALA 147 147 147 ALA ALA B . n B 1 148 GLU 148 148 148 GLU GLU B . n B 1 149 PRO 149 149 149 PRO PRO B . n B 1 150 ALA 150 150 150 ALA ALA B . n B 1 151 GLY 151 151 151 GLY GLY B . n B 1 152 PRO 152 152 152 PRO PRO B . n B 1 153 TRP 153 153 153 TRP TRP B . n B 1 154 ALA 154 154 154 ALA ALA B . n B 1 155 ASP 155 155 155 ASP ASP B . n B 1 156 ILE 156 156 156 ILE ILE B . n B 1 157 MET 157 157 157 MET MET B . n B 1 158 GLN 158 158 158 GLN GLN B . n B 1 159 GLY 159 159 159 GLY GLY B . n B 1 160 PRO 160 160 160 PRO PRO B . n B 1 161 SER 161 161 161 SER SER B . n B 1 162 GLU 162 162 162 GLU GLU B . n B 1 163 SER 163 163 163 SER SER B . n B 1 164 PHE 164 164 164 PHE PHE B . n B 1 165 VAL 165 165 165 VAL VAL B . n B 1 166 ASP 166 166 166 ASP ASP B . n B 1 167 PHE 167 167 167 PHE PHE B . n B 1 168 ALA 168 168 168 ALA ALA B . n B 1 169 ASN 169 169 169 ASN ASN B . n B 1 170 ARG 170 170 170 ARG ARG B . n B 1 171 LEU 171 171 171 LEU LEU B . n B 1 172 ILE 172 172 172 ILE ILE B . n B 1 173 LYS 173 173 173 LYS LYS B . n B 1 174 ALA 174 174 174 ALA ALA B . n B 1 175 VAL 175 175 175 VAL VAL B . n B 1 176 GLU 176 176 176 GLU GLU B . n B 1 177 GLY 177 177 177 GLY GLY B . n B 1 178 SER 178 178 178 SER SER B . n B 1 179 ASP 179 179 179 ASP ASP B . n B 1 180 LEU 180 180 180 LEU LEU B . n B 1 181 PRO 181 181 181 PRO PRO B . n B 1 182 PRO 182 182 182 PRO PRO B . n B 1 183 SER 183 183 183 SER SER B . n B 1 184 ALA 184 184 184 ALA ALA B . n B 1 185 ARG 185 185 185 ARG ARG B . n B 1 186 ALA 186 186 186 ALA ALA B . n B 1 187 PRO 187 187 187 PRO PRO B . n B 1 188 VAL 188 188 188 VAL VAL B . n B 1 189 ILE 189 189 189 ILE ILE B . n B 1 190 ILE 190 190 190 ILE ILE B . n B 1 191 ASP 191 191 191 ASP ASP B . n B 1 192 CYS 192 192 192 CYS CYS B . n B 1 193 PHE 193 193 193 PHE PHE B . n B 1 194 ARG 194 194 194 ARG ARG B . n B 1 195 GLN 195 195 195 GLN GLN B . n B 1 196 LYS 196 196 196 LYS LYS B . n B 1 197 SER 197 197 197 SER SER B . n B 1 198 GLN 198 198 198 GLN GLN B . n B 1 199 PRO 199 199 199 PRO PRO B . n B 1 200 ASP 200 200 200 ASP ASP B . n B 1 201 ILE 201 201 201 ILE ILE B . n B 1 202 GLN 202 202 202 GLN GLN B . n B 1 203 GLN 203 203 203 GLN GLN B . n B 1 204 LEU 204 204 204 LEU LEU B . n B 1 205 ILE 205 205 205 ILE ILE B . n B 1 206 ARG 206 206 206 ARG ARG B . n B 1 207 THR 207 207 207 THR THR B . n B 1 208 ALA 208 208 208 ALA ALA B . n B 1 209 PRO 209 209 209 PRO PRO B . n B 1 210 SER 210 210 210 SER SER B . n B 1 211 THR 211 211 211 THR THR B . n B 1 212 LEU 212 212 212 LEU LEU B . n B 1 213 THR 213 213 213 THR THR B . n B 1 214 THR 214 214 214 THR THR B . n B 1 215 PRO 215 215 215 PRO PRO B . n B 1 216 GLY 216 216 216 GLY GLY B . n B 1 217 GLU 217 217 217 GLU GLU B . n B 1 218 ILE 218 218 218 ILE ILE B . n B 1 219 ILE 219 219 219 ILE ILE B . n B 1 220 LYS 220 220 220 LYS LYS B . n B 1 221 TYR 221 221 221 TYR TYR B . n B 1 222 VAL 222 222 222 VAL VAL B . n B 1 223 LEU 223 223 223 LEU LEU B . n B 1 224 ASP 224 224 224 ASP ASP B . n B 1 225 ARG 225 225 225 ARG ARG B . n B 1 226 GLN 226 226 226 GLN GLN B . n B 1 227 LYS 227 227 227 LYS LYS B . n B 1 228 THR 228 228 228 THR THR B . n B 1 229 ALA 229 229 229 ALA ALA B . n C 1 1 PRO 1 1 ? ? ? C . n C 1 2 VAL 2 2 ? ? ? C . n C 1 3 VAL 3 3 ? ? ? C . n C 1 4 ILE 4 4 ? ? ? C . n C 1 5 LYS 5 5 ? ? ? C . n C 1 6 THR 6 6 ? ? ? C . n C 1 7 GLU 7 7 ? ? ? C . n C 1 8 GLY 8 8 ? ? ? C . n C 1 9 PRO 9 9 ? ? ? C . n C 1 10 ALA 10 10 10 ALA ALA C . n C 1 11 TRP 11 11 11 TRP TRP C . n C 1 12 THR 12 12 12 THR THR C . n C 1 13 PRO 13 13 13 PRO PRO C . n C 1 14 LEU 14 14 14 LEU LEU C . n C 1 15 GLU 15 15 15 GLU GLU C . n C 1 16 PRO 16 16 16 PRO PRO C . n C 1 17 LYS 17 17 17 LYS LYS C . n C 1 18 LEU 18 18 18 LEU LEU C . n C 1 19 ILE 19 19 19 ILE ILE C . n C 1 20 THR 20 20 20 THR THR C . n C 1 21 ARG 21 21 21 ARG ARG C . n C 1 22 LEU 22 22 22 LEU LEU C . n C 1 23 ALA 23 23 23 ALA ALA C . n C 1 24 ASP 24 24 24 ASP ASP C . n C 1 25 THR 25 25 25 THR THR C . n C 1 26 VAL 26 26 26 VAL VAL C . n C 1 27 ARG 27 27 27 ARG ARG C . n C 1 28 THR 28 28 28 THR THR C . n C 1 29 LYS 29 29 29 LYS LYS C . n C 1 30 GLY 30 30 30 GLY GLY C . n C 1 31 LEU 31 31 31 LEU LEU C . n C 1 32 ARG 32 32 32 ARG ARG C . n C 1 33 SER 33 33 33 SER SER C . n C 1 34 PRO 34 34 34 PRO PRO C . n C 1 35 ILE 35 35 35 ILE ILE C . n C 1 36 THR 36 36 36 THR THR C . n C 1 37 MET 37 37 37 MET MET C . n C 1 38 ALA 38 38 38 ALA ALA C . n C 1 39 GLU 39 39 39 GLU GLU C . n C 1 40 VAL 40 40 40 VAL VAL C . n C 1 41 GLU 41 41 41 GLU GLU C . n C 1 42 ALA 42 42 42 ALA ALA C . n C 1 43 LEU 43 43 43 LEU LEU C . n C 1 44 MET 44 44 44 MET MET C . n C 1 45 SER 45 45 45 SER SER C . n C 1 46 SER 46 46 46 SER SER C . n C 1 47 PRO 47 47 47 PRO PRO C . n C 1 48 LEU 48 48 48 LEU LEU C . n C 1 49 LEU 49 49 49 LEU LEU C . n C 1 50 PRO 50 50 50 PRO PRO C . n C 1 51 HIS 51 51 51 HIS HIS C . n C 1 52 ASP 52 52 52 ASP ASP C . n C 1 53 VAL 53 53 53 VAL VAL C . n C 1 54 THR 54 54 54 THR THR C . n C 1 55 ASN 55 55 55 ASN ASN C . n C 1 56 LEU 56 56 56 LEU LEU C . n C 1 57 MET 57 57 57 MET MET C . n C 1 58 ARG 58 58 58 ARG ARG C . n C 1 59 VAL 59 59 59 VAL VAL C . n C 1 60 ILE 60 60 60 ILE ILE C . n C 1 61 LEU 61 61 61 LEU LEU C . n C 1 62 GLY 62 62 62 GLY GLY C . n C 1 63 PRO 63 63 63 PRO PRO C . n C 1 64 ALA 64 64 64 ALA ALA C . n C 1 65 PRO 65 65 65 PRO PRO C . n C 1 66 TYR 66 66 66 TYR TYR C . n C 1 67 ALA 67 67 67 ALA ALA C . n C 1 68 LEU 68 68 68 LEU LEU C . n C 1 69 TRP 69 69 69 TRP TRP C . n C 1 70 MET 70 70 70 MET MET C . n C 1 71 ASP 71 71 71 ASP ASP C . n C 1 72 ALA 72 72 72 ALA ALA C . n C 1 73 TRP 73 73 73 TRP TRP C . n C 1 74 GLY 74 74 74 GLY GLY C . n C 1 75 VAL 75 75 75 VAL VAL C . n C 1 76 GLN 76 76 76 GLN GLN C . n C 1 77 LEU 77 77 77 LEU LEU C . n C 1 78 GLN 78 78 78 GLN GLN C . n C 1 79 THR 79 79 79 THR THR C . n C 1 80 VAL 80 80 80 VAL VAL C . n C 1 81 ILE 81 81 81 ILE ILE C . n C 1 82 ALA 82 82 82 ALA ALA C . n C 1 83 ALA 83 83 83 ALA ALA C . n C 1 84 ALA 84 84 84 ALA ALA C . n C 1 85 THR 85 85 85 THR THR C . n C 1 86 ARG 86 86 86 ARG ARG C . n C 1 87 ASP 87 87 87 ASP ASP C . n C 1 88 PRO 88 88 88 PRO PRO C . n C 1 89 ARG 89 89 89 ARG ARG C . n C 1 90 HIS 90 90 90 HIS HIS C . n C 1 91 PRO 91 91 91 PRO PRO C . n C 1 92 ALA 92 92 92 ALA ALA C . n C 1 93 ASN 93 93 93 ASN ASN C . n C 1 94 GLY 94 94 94 GLY GLY C . n C 1 95 GLN 95 95 95 GLN GLN C . n C 1 96 GLY 96 96 96 GLY GLY C . n C 1 97 ARG 97 97 97 ARG ARG C . n C 1 98 GLY 98 98 98 GLY GLY C . n C 1 99 GLU 99 99 99 GLU GLU C . n C 1 100 ARG 100 100 100 ARG ARG C . n C 1 101 THR 101 101 101 THR THR C . n C 1 102 ASN 102 102 102 ASN ASN C . n C 1 103 LEU 103 103 103 LEU LEU C . n C 1 104 ASN 104 104 104 ASN ASN C . n C 1 105 ARG 105 105 105 ARG ARG C . n C 1 106 LEU 106 106 106 LEU LEU C . n C 1 107 LYS 107 107 107 LYS LYS C . n C 1 108 GLY 108 108 108 GLY GLY C . n C 1 109 LEU 109 109 109 LEU LEU C . n C 1 110 ALA 110 110 110 ALA ALA C . n C 1 111 ASP 111 111 111 ASP ASP C . n C 1 112 GLY 112 112 112 GLY GLY C . n C 1 113 MET 113 113 113 MET MET C . n C 1 114 VAL 114 114 114 VAL VAL C . n C 1 115 GLY 115 115 115 GLY GLY C . n C 1 116 ASN 116 116 116 ASN ASN C . n C 1 117 PRO 117 117 117 PRO PRO C . n C 1 118 GLN 118 118 118 GLN GLN C . n C 1 119 GLY 119 119 119 GLY GLY C . n C 1 120 GLN 120 120 120 GLN GLN C . n C 1 121 ALA 121 121 121 ALA ALA C . n C 1 122 ALA 122 122 122 ALA ALA C . n C 1 123 LEU 123 123 123 LEU LEU C . n C 1 124 LEU 124 124 124 LEU LEU C . n C 1 125 ARG 125 125 125 ARG ARG C . n C 1 126 PRO 126 126 126 PRO PRO C . n C 1 127 GLY 127 127 127 GLY GLY C . n C 1 128 GLU 128 128 128 GLU GLU C . n C 1 129 LEU 129 129 129 LEU LEU C . n C 1 130 VAL 130 130 130 VAL VAL C . n C 1 131 ALA 131 131 131 ALA ALA C . n C 1 132 ILE 132 132 132 ILE ILE C . n C 1 133 THR 133 133 133 THR THR C . n C 1 134 ALA 134 134 134 ALA ALA C . n C 1 135 SER 135 135 135 SER SER C . n C 1 136 ALA 136 136 136 ALA ALA C . n C 1 137 LEU 137 137 137 LEU LEU C . n C 1 138 GLN 138 138 138 GLN GLN C . n C 1 139 ALA 139 139 139 ALA ALA C . n C 1 140 PHE 140 140 140 PHE PHE C . n C 1 141 ARG 141 141 141 ARG ARG C . n C 1 142 GLU 142 142 142 GLU GLU C . n C 1 143 VAL 143 143 143 VAL VAL C . n C 1 144 ALA 144 144 144 ALA ALA C . n C 1 145 ARG 145 145 145 ARG ARG C . n C 1 146 LEU 146 146 146 LEU LEU C . n C 1 147 ALA 147 147 147 ALA ALA C . n C 1 148 GLU 148 148 148 GLU GLU C . n C 1 149 PRO 149 149 149 PRO PRO C . n C 1 150 ALA 150 150 150 ALA ALA C . n C 1 151 GLY 151 151 151 GLY GLY C . n C 1 152 PRO 152 152 152 PRO PRO C . n C 1 153 TRP 153 153 153 TRP TRP C . n C 1 154 ALA 154 154 154 ALA ALA C . n C 1 155 ASP 155 155 155 ASP ASP C . n C 1 156 ILE 156 156 156 ILE ILE C . n C 1 157 MET 157 157 157 MET MET C . n C 1 158 GLN 158 158 158 GLN GLN C . n C 1 159 GLY 159 159 159 GLY GLY C . n C 1 160 PRO 160 160 160 PRO PRO C . n C 1 161 SER 161 161 161 SER SER C . n C 1 162 GLU 162 162 162 GLU GLU C . n C 1 163 SER 163 163 163 SER SER C . n C 1 164 PHE 164 164 164 PHE PHE C . n C 1 165 VAL 165 165 165 VAL VAL C . n C 1 166 ASP 166 166 166 ASP ASP C . n C 1 167 PHE 167 167 167 PHE PHE C . n C 1 168 ALA 168 168 168 ALA ALA C . n C 1 169 ASN 169 169 169 ASN ASN C . n C 1 170 ARG 170 170 170 ARG ARG C . n C 1 171 LEU 171 171 171 LEU LEU C . n C 1 172 ILE 172 172 172 ILE ILE C . n C 1 173 LYS 173 173 173 LYS LYS C . n C 1 174 ALA 174 174 174 ALA ALA C . n C 1 175 VAL 175 175 175 VAL VAL C . n C 1 176 GLU 176 176 176 GLU GLU C . n C 1 177 GLY 177 177 177 GLY GLY C . n C 1 178 SER 178 178 178 SER SER C . n C 1 179 ASP 179 179 179 ASP ASP C . n C 1 180 LEU 180 180 180 LEU LEU C . n C 1 181 PRO 181 181 181 PRO PRO C . n C 1 182 PRO 182 182 182 PRO PRO C . n C 1 183 SER 183 183 183 SER SER C . n C 1 184 ALA 184 184 184 ALA ALA C . n C 1 185 ARG 185 185 185 ARG ARG C . n C 1 186 ALA 186 186 186 ALA ALA C . n C 1 187 PRO 187 187 187 PRO PRO C . n C 1 188 VAL 188 188 188 VAL VAL C . n C 1 189 ILE 189 189 189 ILE ILE C . n C 1 190 ILE 190 190 190 ILE ILE C . n C 1 191 ASP 191 191 191 ASP ASP C . n C 1 192 CYS 192 192 192 CYS CYS C . n C 1 193 PHE 193 193 193 PHE PHE C . n C 1 194 ARG 194 194 194 ARG ARG C . n C 1 195 GLN 195 195 195 GLN GLN C . n C 1 196 LYS 196 196 196 LYS LYS C . n C 1 197 SER 197 197 197 SER SER C . n C 1 198 GLN 198 198 198 GLN GLN C . n C 1 199 PRO 199 199 199 PRO PRO C . n C 1 200 ASP 200 200 200 ASP ASP C . n C 1 201 ILE 201 201 201 ILE ILE C . n C 1 202 GLN 202 202 202 GLN GLN C . n C 1 203 GLN 203 203 203 GLN GLN C . n C 1 204 LEU 204 204 204 LEU LEU C . n C 1 205 ILE 205 205 205 ILE ILE C . n C 1 206 ARG 206 206 206 ARG ARG C . n C 1 207 THR 207 207 207 THR THR C . n C 1 208 ALA 208 208 208 ALA ALA C . n C 1 209 PRO 209 209 209 PRO PRO C . n C 1 210 SER 210 210 210 SER SER C . n C 1 211 THR 211 211 211 THR THR C . n C 1 212 LEU 212 212 212 LEU LEU C . n C 1 213 THR 213 213 213 THR THR C . n C 1 214 THR 214 214 214 THR THR C . n C 1 215 PRO 215 215 215 PRO PRO C . n C 1 216 GLY 216 216 216 GLY GLY C . n C 1 217 GLU 217 217 217 GLU GLU C . n C 1 218 ILE 218 218 218 ILE ILE C . n C 1 219 ILE 219 219 219 ILE ILE C . n C 1 220 LYS 220 220 220 LYS LYS C . n C 1 221 TYR 221 221 221 TYR TYR C . n C 1 222 VAL 222 222 222 VAL VAL C . n C 1 223 LEU 223 223 223 LEU LEU C . n C 1 224 ASP 224 224 224 ASP ASP C . n C 1 225 ARG 225 225 225 ARG ARG C . n C 1 226 GLN 226 226 226 GLN GLN C . n C 1 227 LYS 227 227 227 LYS LYS C . n C 1 228 THR 228 228 228 THR THR C . n C 1 229 ALA 229 229 229 ALA ALA C . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7NO2 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 7NO2 _struct.title 'Structure of the mature RSV CA lattice: hexamer derived from tubes (C2-symmetric)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7NO2 _struct_keywords.text 'Retrovirus, Rous sarcoma virus, capsid protein, IP6, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GAG_RSVP _struct_ref.pdbx_db_accession P03322 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHDVTNLMRVILGPAPYALWMDAWGVQLQTV IAAATRDPRHPANGQGRGERTNLNRLKGLADGMVGNPQGQAALLRPGELVAITASALQAFREVARLAEPAGPWADIMQGP SESFVDFANRLIKAVEGSDLPPSARAPVIIDCFRQKSQPDIQQLIRTAPSTLTTPGEIIKYVLDRQKTA ; _struct_ref.pdbx_align_begin 240 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7NO2 A 1 ? 229 ? P03322 240 ? 468 ? 1 229 2 1 7NO2 B 1 ? 229 ? P03322 240 ? 468 ? 1 229 3 1 7NO2 C 1 ? 229 ? P03322 240 ? 468 ? 1 229 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details 'UCSF CHIMERA 1.13.1_b41965.' _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.000000 0.000000 0.000000 0.00000 0.000000 1.000000 0.000000 0.00000 0.000000 0.000000 1.000000 0.00000 2 'point symmetry operation' ? ? -1.000000 -0.000000 0.000000 297.42722 0.000000 -1.000000 0.000000 297.42722 0.000000 0.000000 1.000000 0.00000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLU A 15 ? LYS A 29 ? GLU A 15 LYS A 29 1 ? 15 HELX_P HELX_P2 AA2 SER A 33 ? MET A 44 ? SER A 33 MET A 44 1 ? 12 HELX_P HELX_P3 AA3 LEU A 49 ? LEU A 61 ? LEU A 49 LEU A 61 1 ? 13 HELX_P HELX_P4 AA4 PRO A 63 ? ASP A 87 ? PRO A 63 ASP A 87 1 ? 25 HELX_P HELX_P5 AA5 ASN A 102 ? GLY A 108 ? ASN A 102 GLY A 108 1 ? 7 HELX_P HELX_P6 AA6 ASN A 116 ? LEU A 123 ? ASN A 116 LEU A 123 1 ? 8 HELX_P HELX_P7 AA7 ARG A 125 ? GLU A 148 ? ARG A 125 GLU A 148 1 ? 24 HELX_P HELX_P8 AA8 PRO A 152 ? ILE A 156 ? PRO A 152 ILE A 156 5 ? 5 HELX_P HELX_P9 AA9 SER A 163 ? GLY A 177 ? SER A 163 GLY A 177 1 ? 15 HELX_P HELX_P10 AB1 ARG A 185 ? SER A 197 ? ARG A 185 SER A 197 1 ? 13 HELX_P HELX_P11 AB2 GLN A 198 ? ARG A 206 ? GLN A 198 ARG A 206 1 ? 9 HELX_P HELX_P12 AB3 THR A 214 ? ARG A 225 ? THR A 214 ARG A 225 1 ? 12 HELX_P HELX_P13 AB4 GLU B 15 ? GLY B 30 ? GLU B 15 GLY B 30 1 ? 16 HELX_P HELX_P14 AB5 SER B 33 ? MET B 44 ? SER B 33 MET B 44 1 ? 12 HELX_P HELX_P15 AB6 LEU B 49 ? LEU B 61 ? LEU B 49 LEU B 61 1 ? 13 HELX_P HELX_P16 AB7 GLY B 62 ? ARG B 86 ? GLY B 62 ARG B 86 1 ? 25 HELX_P HELX_P17 AB8 GLY B 96 ? ARG B 100 ? GLY B 96 ARG B 100 5 ? 5 HELX_P HELX_P18 AB9 ASN B 102 ? GLY B 108 ? ASN B 102 GLY B 108 1 ? 7 HELX_P HELX_P19 AC1 ASN B 116 ? LEU B 123 ? ASN B 116 LEU B 123 1 ? 8 HELX_P HELX_P20 AC2 ARG B 125 ? GLU B 148 ? ARG B 125 GLU B 148 1 ? 24 HELX_P HELX_P21 AC3 SER B 163 ? GLY B 177 ? SER B 163 GLY B 177 1 ? 15 HELX_P HELX_P22 AC4 PRO B 182 ? ARG B 185 ? PRO B 182 ARG B 185 5 ? 4 HELX_P HELX_P23 AC5 ALA B 186 ? SER B 197 ? ALA B 186 SER B 197 1 ? 12 HELX_P HELX_P24 AC6 GLN B 198 ? THR B 207 ? GLN B 198 THR B 207 1 ? 10 HELX_P HELX_P25 AC7 THR B 214 ? ARG B 225 ? THR B 214 ARG B 225 1 ? 12 HELX_P HELX_P26 AC8 GLU C 15 ? LYS C 29 ? GLU C 15 LYS C 29 1 ? 15 HELX_P HELX_P27 AC9 SER C 33 ? MET C 44 ? SER C 33 MET C 44 1 ? 12 HELX_P HELX_P28 AD1 LEU C 49 ? LEU C 61 ? LEU C 49 LEU C 61 1 ? 13 HELX_P HELX_P29 AD2 GLY C 62 ? ASP C 87 ? GLY C 62 ASP C 87 1 ? 26 HELX_P HELX_P30 AD3 ASN C 102 ? LEU C 106 ? ASN C 102 LEU C 106 5 ? 5 HELX_P HELX_P31 AD4 ASN C 116 ? LEU C 123 ? ASN C 116 LEU C 123 1 ? 8 HELX_P HELX_P32 AD5 ARG C 125 ? GLU C 148 ? ARG C 125 GLU C 148 1 ? 24 HELX_P HELX_P33 AD6 SER C 163 ? GLY C 177 ? SER C 163 GLY C 177 1 ? 15 HELX_P HELX_P34 AD7 PRO C 181 ? ALA C 184 ? PRO C 181 ALA C 184 5 ? 4 HELX_P HELX_P35 AD8 ARG C 185 ? SER C 197 ? ARG C 185 SER C 197 1 ? 13 HELX_P HELX_P36 AD9 GLN C 198 ? ARG C 206 ? GLN C 198 ARG C 206 1 ? 9 HELX_P HELX_P37 AE1 THR C 214 ? ARG C 225 ? THR C 214 ARG C 225 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B ALA 92 ? ? OG1 B THR 101 ? ? 2.08 2 1 O A PRO 16 ? ? OG1 A THR 20 ? ? 2.13 3 1 O C LEU 204 ? ? OG1 C THR 207 ? ? 2.16 4 1 O B GLN 76 ? ? OG1 B THR 79 ? ? 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 13 ? ? -78.93 -159.89 2 1 THR A 28 ? ? -89.95 -70.77 3 1 LYS A 29 ? ? -63.77 -76.92 4 1 SER A 45 ? ? -140.78 -38.62 5 1 PRO A 88 ? ? -59.14 -3.91 6 1 GLU A 99 ? ? -107.42 66.81 7 1 MET A 113 ? ? -136.83 -34.44 8 1 LEU A 123 ? ? -117.87 -88.51 9 1 PRO A 152 ? ? -68.61 90.19 10 1 SER A 161 ? ? -68.21 4.14 11 1 ALA A 184 ? ? -71.95 42.10 12 1 THR A 207 ? ? -69.79 14.91 13 1 SER A 210 ? ? -67.99 70.34 14 1 PRO B 13 ? ? -75.40 -161.76 15 1 ARG B 89 ? ? -69.22 5.69 16 1 ALA B 150 ? ? -146.62 -99.97 17 1 PRO B 160 ? ? -67.77 1.21 18 1 SER B 161 ? ? -150.18 -5.88 19 1 ALA B 184 ? ? -90.23 41.05 20 1 ALA B 186 ? ? -96.62 -63.95 21 1 LYS B 196 ? ? -140.01 -30.01 22 1 THR B 213 ? ? -111.23 -75.39 23 1 ARG B 225 ? ? -68.63 2.97 24 1 PRO C 13 ? ? -71.20 -163.02 25 1 ARG C 89 ? ? -80.94 32.42 26 1 ALA C 154 ? ? -67.91 12.32 27 1 SER C 161 ? ? -155.80 24.94 28 1 SER C 178 ? ? -165.43 -159.58 29 1 ARG C 185 ? ? -96.85 -78.26 30 1 THR C 214 ? ? -173.20 136.85 # _em_3d_fitting.entry_id 7NO2 _em_3d_fitting.id 1 _em_3d_fitting.details ;Three copies of CA monomer were rigid body-fitted into the EM density to accommodate the 3 symmetry independent CA copies. The fit was further refined in Coot. The symmetry independent copies were expanded according to the C2 symmetry, and an additional ring of CTDs adjacent to the CA hexamer was added to account for the continuous lattice during the refinement. The model was refined by iterating between automatic real space refinement in Phenix and manual model inspection/editing in Coot. ; _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol 'AB INITIO MODEL' _em_3d_fitting.ref_space REAL _em_3d_fitting.target_criteria 'Correlation coefficient' _em_3d_fitting.method ? # _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.id 1 _em_3d_fitting_list.details ? _em_3d_fitting_list.pdb_chain_id A _em_3d_fitting_list.pdb_chain_residue_range 10-226 _em_3d_fitting_list.pdb_entry_id 3TIR _em_3d_fitting_list.initial_refinement_model_id 1 _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code 3TIR # _em_3d_reconstruction.entry_id 7NO2 _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm 'BACK PROJECTION' _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 40962 _em_3d_reconstruction.resolution 4.3 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 6.2 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'Rous sarcoma virus - Prague C' _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type VIRUS _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 7NO2 _em_image_scans.id 1 _em_image_scans.dimension_height 3838 _em_image_scans.dimension_width 3708 _em_image_scans.frames_per_image 10 _em_image_scans.image_recording_id 1 _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.used_frames_per_image 1-10 _em_image_scans.citation_id ? _em_image_scans.number_digital_images ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.details ? # _em_imaging.id 1 _em_imaging.entry_id 7NO2 _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure 'ZEMLIN TABLEAU' _em_imaging.c2_aperture_diameter 100 _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen NITROGEN _em_imaging.details ;Areas of interest for high-resolution data collection were identified in low magnification montages. Prior to tomogram acquisition, gain references were acquired and the filter was fully tuned. Microscope tuning was performed using the FEI AutoCTF software. The ilumination mode used during acquisition was nanoprobe. ; _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_max 4000 _em_imaging.nominal_defocus_min 1500 _em_imaging.nominal_magnification 105000 _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 200 _em_sample_support.grid_type C-flat-2/2 _em_sample_support.method ? _em_sample_support.film_material ? # _em_virus_entity.entity_assembly_id 1 _em_virus_entity.empty YES _em_virus_entity.enveloped NO _em_virus_entity.virus_isolate OTHER _em_virus_entity.virus_type 'VIRUS-LIKE PARTICLE' _em_virus_entity.id 1 _em_virus_entity.virus_host_category ? _em_virus_entity.details ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 277 _em_vitrification.cryogen_name ETHANE _em_vitrification.details '2.5 seconds blotting time' _em_vitrification.humidity 100 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.entry_id 7NO2 _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7NO2 _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SUBTOMOGRAM AVERAGING' _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 7NO2 _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PRO 1 ? A PRO 1 2 1 Y 1 A VAL 2 ? A VAL 2 3 1 Y 1 A VAL 3 ? A VAL 3 4 1 Y 1 A ILE 4 ? A ILE 4 5 1 Y 1 A LYS 5 ? A LYS 5 6 1 Y 1 A THR 6 ? A THR 6 7 1 Y 1 A GLU 7 ? A GLU 7 8 1 Y 1 A GLY 8 ? A GLY 8 9 1 Y 1 A PRO 9 ? A PRO 9 10 1 Y 1 B PRO 1 ? B PRO 1 11 1 Y 1 B VAL 2 ? B VAL 2 12 1 Y 1 B VAL 3 ? B VAL 3 13 1 Y 1 B ILE 4 ? B ILE 4 14 1 Y 1 B LYS 5 ? B LYS 5 15 1 Y 1 B THR 6 ? B THR 6 16 1 Y 1 B GLU 7 ? B GLU 7 17 1 Y 1 B GLY 8 ? B GLY 8 18 1 Y 1 B PRO 9 ? B PRO 9 19 1 Y 1 C PRO 1 ? C PRO 1 20 1 Y 1 C VAL 2 ? C VAL 2 21 1 Y 1 C VAL 3 ? C VAL 3 22 1 Y 1 C ILE 4 ? C ILE 4 23 1 Y 1 C LYS 5 ? C LYS 5 24 1 Y 1 C THR 6 ? C THR 6 25 1 Y 1 C GLU 7 ? C GLU 7 26 1 Y 1 C GLY 8 ? C GLY 8 27 1 Y 1 C PRO 9 ? C PRO 9 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_admin.entry_id 7NO2 _em_admin.current_status REL _em_admin.deposition_date 2021-02-25 _em_admin.deposition_site PDBE _em_admin.last_update 2024-07-10 _em_admin.map_release_date 2021-04-21 _em_admin.title 'Structure of the mature RSV CA lattice: hexamer derived from tubes (C2-symmetric)' # loop_ _em_buffer_component.buffer_id _em_buffer_component.id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.name 1 1 20 mM MES '2-(N-morpholino)ethanesulfonic acid' 1 2 100 mM NaCl 'sodium chloride' 1 3 2 nM TCEP 'tris(2-carboxyethyl)phosphine' 1 4 100 microM IP6 'inositol hexakisphosphate' # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details 'CTF-correction was initially performed using ctfphaseflip in IMOD and NovaCTF in the final steps' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 11888 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Rous sarcoma virus - Prague C' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.ncbi_tax_id 469008 _em_entity_assembly_recombinant.organism 'Escherichia coli BL21(DE3)' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 3.5 _em_image_recording.average_exposure_time 1.4 _em_image_recording.details ? _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'GATAN K2 QUANTUM (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images ? # _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_name 'GIF Quantum LS' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.energyfilter_slit_width 20 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? _em_imaging_optics.details ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'VOLUME SELECTION' ? MATLAB R2018b 1 ? ? 2 'VOLUME SELECTION' ? IMOD 4.9 1 ? ? 3 'VOLUME SELECTION' ? Dynamo 1.1.333 1 ? ? 4 'IMAGE ACQUISITION' ? SerialEM ? ? ? 1 5 'IMAGE ACQUISITION' ? DigitalMicrograph ? ? ? 1 6 MASKING ? ? ? ? ? ? 7 'CTF CORRECTION' ? CTFFIND 4.1.10 1 ? ? 8 'CTF CORRECTION' ? IMOD 4.9 1 ? ? 9 'CTF CORRECTION' ? NOVACTF ? 1 ? ? 10 'LAYERLINE INDEXING' ? ? ? ? ? ? 11 'DIFFRACTION INDEXING' ? ? ? ? ? ? 12 'MODEL FITTING' ? 'UCSF Chimera' 1.13.1 ? 1 ? 13 'MODEL FITTING' ? Coot 0.8.9.1 ? 1 ? 14 OTHER ? ? ? ? ? ? 15 'INITIAL EULER ASSIGNMENT' ? ? ? 1 ? ? 16 'FINAL EULER ASSIGNMENT' ? Dynamo 1.1.333 1 ? ? 17 CLASSIFICATION ? MATLAB R2018b 1 ? ? 18 RECONSTRUCTION ? Dynamo 1.1.333 1 ? ? 19 RECONSTRUCTION 'amplitude reweighting using AV3' AV3 ? 1 ? ? 20 'MODEL REFINEMENT' ? PHENIX 1.18 ? 1 ? 21 'MODEL REFINEMENT' ? Coot 0.8.9.1 ? 1 ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _em_virus_natural_host.id 1 _em_virus_natural_host.entity_assembly_id 1 _em_virus_natural_host.ncbi_tax_id 32644 _em_virus_natural_host.organism unidentified _em_virus_natural_host.strain ? # _em_virus_shell.id 1 _em_virus_shell.entity_assembly_id 1 _em_virus_shell.diameter ? _em_virus_shell.name 'CANC tubes' _em_virus_shell.triangulation ? # _em_volume_selection.id 1 _em_volume_selection.details ? _em_volume_selection.image_processing_id 1 _em_volume_selection.method ? _em_volume_selection.num_tomograms 44 _em_volume_selection.num_volumes_extracted 45088 _em_volume_selection.reference_model ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Austrian Science Fund' Austria P31445 1 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' R01AI147890 2 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' R01AI150454 3 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' R35GM136258 4 'European Union (EU)' 'European Union' 'Horizon 2020, iNEXT (PID4246) , Grant number 653706' 5 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3TIR # _atom_sites.entry_id 7NO2 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_