data_7VSO # _entry.id 7VSO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7VSO pdb_00007vso 10.2210/pdb7vso/pdb WWPDB D_1300025311 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7VSO _pdbx_database_status.recvd_initial_deposition_date 2021-10-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Mizohata, E.' 1 ? 'Nakane, T.' 2 ? 'Hanashima, S.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country CH _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Membranes (Basel)' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2077-0375 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 11 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Heavy Atom Detergent/Lipid Combined X-ray Crystallography for Elucidating the Structure-Function Relationships of Membrane Proteins. ; _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.3390/membranes11110823 _citation.pdbx_database_id_PubMed 34832053 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hanashima, S.' 1 0000-0003-3102-7890 primary 'Nakane, T.' 2 0000-0003-2697-2767 primary 'Mizohata, E.' 3 0000-0002-5526-5343 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7VSO _cell.details ? _cell.formula_units_Z ? _cell.length_a 46.200 _cell.length_a_esd ? _cell.length_b 103.000 _cell.length_b_esd ? _cell.length_c 128.700 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VSO _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat Bacteriorhodopsin 26929.500 1 ? ? ? ? 2 non-polymer syn RETINAL 284.436 1 ? ? ? ? 3 non-polymer syn '2-[[(2R)-2-(3-bromanyl-5-iodanyl-phenyl)carbonyloxy-3-tetradecanoyloxy-propoxy]-oxidanyl-phosphoryl]oxyethyl-trimethyl-azanium' 777.483 1 ? ? ? ? 4 non-polymer syn 'IODIDE ION' 126.904 1 ? ? ? ? 5 non-polymer syn '3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE' 614.877 1 ? ? ? ? 6 non-polymer syn N-OCTANE 114.229 2 ? ? ? ? 7 non-polymer syn HEPTANE 100.202 5 ? ? ? ? 8 non-polymer syn DODECANE 170.335 3 ? ? ? ? 9 non-polymer syn HEXADECANE 226.441 3 ? ? ? ? 10 non-polymer syn DECANE 142.282 2 ? ? ? ? 11 non-polymer syn nonane 128.255 1 ? ? ? ? 12 water nat water 18.015 32 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name BR,Bacterioopsin,BO # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;QAQITGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYW ARYADWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKA ESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFGEAEAPEPSA GDGAAATSD ; _entity_poly.pdbx_seq_one_letter_code_can ;QAQITGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYW ARYADWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKA ESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFGEAEAPEPSA GDGAAATSD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 ALA n 1 3 GLN n 1 4 ILE n 1 5 THR n 1 6 GLY n 1 7 ARG n 1 8 PRO n 1 9 GLU n 1 10 TRP n 1 11 ILE n 1 12 TRP n 1 13 LEU n 1 14 ALA n 1 15 LEU n 1 16 GLY n 1 17 THR n 1 18 ALA n 1 19 LEU n 1 20 MET n 1 21 GLY n 1 22 LEU n 1 23 GLY n 1 24 THR n 1 25 LEU n 1 26 TYR n 1 27 PHE n 1 28 LEU n 1 29 VAL n 1 30 LYS n 1 31 GLY n 1 32 MET n 1 33 GLY n 1 34 VAL n 1 35 SER n 1 36 ASP n 1 37 PRO n 1 38 ASP n 1 39 ALA n 1 40 LYS n 1 41 LYS n 1 42 PHE n 1 43 TYR n 1 44 ALA n 1 45 ILE n 1 46 THR n 1 47 THR n 1 48 LEU n 1 49 VAL n 1 50 PRO n 1 51 ALA n 1 52 ILE n 1 53 ALA n 1 54 PHE n 1 55 THR n 1 56 MET n 1 57 TYR n 1 58 LEU n 1 59 SER n 1 60 MET n 1 61 LEU n 1 62 LEU n 1 63 GLY n 1 64 TYR n 1 65 GLY n 1 66 LEU n 1 67 THR n 1 68 MET n 1 69 VAL n 1 70 PRO n 1 71 PHE n 1 72 GLY n 1 73 GLY n 1 74 GLU n 1 75 GLN n 1 76 ASN n 1 77 PRO n 1 78 ILE n 1 79 TYR n 1 80 TRP n 1 81 ALA n 1 82 ARG n 1 83 TYR n 1 84 ALA n 1 85 ASP n 1 86 TRP n 1 87 LEU n 1 88 PHE n 1 89 THR n 1 90 THR n 1 91 PRO n 1 92 LEU n 1 93 LEU n 1 94 LEU n 1 95 LEU n 1 96 ASP n 1 97 LEU n 1 98 ALA n 1 99 LEU n 1 100 LEU n 1 101 VAL n 1 102 ASP n 1 103 ALA n 1 104 ASP n 1 105 GLN n 1 106 GLY n 1 107 THR n 1 108 ILE n 1 109 LEU n 1 110 ALA n 1 111 LEU n 1 112 VAL n 1 113 GLY n 1 114 ALA n 1 115 ASP n 1 116 GLY n 1 117 ILE n 1 118 MET n 1 119 ILE n 1 120 GLY n 1 121 THR n 1 122 GLY n 1 123 LEU n 1 124 VAL n 1 125 GLY n 1 126 ALA n 1 127 LEU n 1 128 THR n 1 129 LYS n 1 130 VAL n 1 131 TYR n 1 132 SER n 1 133 TYR n 1 134 ARG n 1 135 PHE n 1 136 VAL n 1 137 TRP n 1 138 TRP n 1 139 ALA n 1 140 ILE n 1 141 SER n 1 142 THR n 1 143 ALA n 1 144 ALA n 1 145 MET n 1 146 LEU n 1 147 TYR n 1 148 ILE n 1 149 LEU n 1 150 TYR n 1 151 VAL n 1 152 LEU n 1 153 PHE n 1 154 PHE n 1 155 GLY n 1 156 PHE n 1 157 THR n 1 158 SER n 1 159 LYS n 1 160 ALA n 1 161 GLU n 1 162 SER n 1 163 MET n 1 164 ARG n 1 165 PRO n 1 166 GLU n 1 167 VAL n 1 168 ALA n 1 169 SER n 1 170 THR n 1 171 PHE n 1 172 LYS n 1 173 VAL n 1 174 LEU n 1 175 ARG n 1 176 ASN n 1 177 VAL n 1 178 THR n 1 179 VAL n 1 180 VAL n 1 181 LEU n 1 182 TRP n 1 183 SER n 1 184 ALA n 1 185 TYR n 1 186 PRO n 1 187 VAL n 1 188 VAL n 1 189 TRP n 1 190 LEU n 1 191 ILE n 1 192 GLY n 1 193 SER n 1 194 GLU n 1 195 GLY n 1 196 ALA n 1 197 GLY n 1 198 ILE n 1 199 VAL n 1 200 PRO n 1 201 LEU n 1 202 ASN n 1 203 ILE n 1 204 GLU n 1 205 THR n 1 206 LEU n 1 207 LEU n 1 208 PHE n 1 209 MET n 1 210 VAL n 1 211 LEU n 1 212 ASP n 1 213 VAL n 1 214 SER n 1 215 ALA n 1 216 LYS n 1 217 VAL n 1 218 GLY n 1 219 PHE n 1 220 GLY n 1 221 LEU n 1 222 ILE n 1 223 LEU n 1 224 LEU n 1 225 ARG n 1 226 SER n 1 227 ARG n 1 228 ALA n 1 229 ILE n 1 230 PHE n 1 231 GLY n 1 232 GLU n 1 233 ALA n 1 234 GLU n 1 235 ALA n 1 236 PRO n 1 237 GLU n 1 238 PRO n 1 239 SER n 1 240 ALA n 1 241 GLY n 1 242 ASP n 1 243 GLY n 1 244 ALA n 1 245 ALA n 1 246 ALA n 1 247 THR n 1 248 SER n 1 249 ASP n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 249 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Halobacterium salinarum' _entity_src_nat.pdbx_ncbi_taxonomy_id 2242 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain R1M1 _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BACR_HALSA _struct_ref.pdbx_db_accession P02945 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QAQITGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYW ARYADWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKA ESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFGEAEAPEPSA GDGAAATSD ; _struct_ref.pdbx_align_begin 14 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7VSO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 249 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02945 _struct_ref_seq.db_align_beg 14 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 262 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 249 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 7YH non-polymer . '2-[[(2R)-2-(3-bromanyl-5-iodanyl-phenyl)carbonyloxy-3-tetradecanoyloxy-propoxy]-oxidanyl-phosphoryl]oxyethyl-trimethyl-azanium' ? 'C29 H49 Br I N O8 P 1' 777.483 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CPS non-polymer . '3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE' CHAPS 'C32 H58 N2 O7 S' 614.877 D10 non-polymer . DECANE ? 'C10 H22' 142.282 D12 non-polymer . DODECANE ? 'C12 H26' 170.335 DD9 non-polymer . nonane ? 'C9 H20' 128.255 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 HP6 non-polymer . HEPTANE ? 'C7 H16' 100.202 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 OCT non-polymer . N-OCTANE ? 'C8 H18' 114.229 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 R16 non-polymer . HEXADECANE ? 'C16 H34' 226.441 RET non-polymer . RETINAL ? 'C20 H28 O' 284.436 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7VSO _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.84 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 56.73 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'BATCH MODE' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;25%(W/V) DMPC/CHAPSO BICELLES, 3.2 M REMARK 280 NAH2PO4, 3.5%(W/V) TRIETHYLENE GLYCOL, 180 MM 1,6-HEXANEDIOL, 4 MM HAD16 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type MPCCD _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-11-22 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.771 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'FREE ELECTRON LASER' _diffrn_source.target ? _diffrn_source.type 'SACLA BEAMLINE BL3' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.771 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL3 _diffrn_source.pdbx_synchrotron_site SACLA # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7VSO _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.35 _reflns.d_resolution_low 42.9 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 13211 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 206.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.34 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.991 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.35 _reflns_shell.d_res_low 2.43 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 897 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.488 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] 1.64 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] -1.21 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] -0.43 _refine.B_iso_max ? _refine.B_iso_mean 79.264 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.947 _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7VSO _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.35 _refine.ls_d_res_low 42.9 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12530 _refine.ls_number_reflns_R_free 650 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.92 _refine.ls_percent_reflns_R_free 4.9 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.16025 _refine.ls_R_factor_R_free 0.20982 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.15761 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5B35 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.262 _refine.pdbx_overall_ESU_R_Free 0.204 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 7.393 _refine.overall_SU_ML 0.164 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.details ? _refine_hist.d_res_high 2.35 _refine_hist.d_res_low 42.9 _refine_hist.number_atoms_solvent 32 _refine_hist.number_atoms_total 2026 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1741 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 253 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.017 0.020 2070 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.955 2.088 2759 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 4.645 5.000 223 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.440 22.069 58 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 17.501 15.000 283 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 16.637 15.000 7 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.116 0.200 306 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.009 0.021 1356 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 5.169 7.272 895 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 5.992 10.921 1117 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 8.309 8.353 1175 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 10.682 71.546 8196 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.350 _refine_ls_shell.d_res_low 2.411 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 41 _refine_ls_shell.number_reflns_R_work 897 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.323 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.329 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 7VSO _struct.title ;Serial Femtosecond Crystallography (SFX) of Ground State Bacteriorhodopsin Crystallized from Bicelles in Complex with HAD16 Determined Using 7-keV X-ray Free Electron Laser (XFEL) at SACLA ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7VSO _struct_keywords.text 'proton pump, transport protein, retinal, proton transport, MEMBRANE PROTEIN' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 8 ? I N N 9 ? J N N 10 ? K N N 9 ? L N N 7 ? M N N 10 ? N N N 7 ? O N N 7 ? P N N 11 ? Q N N 8 ? R N N 8 ? S N N 9 ? T N N 7 ? U N N 6 ? V N N 12 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLU A 9 ? GLY A 33 ? GLU A 9 GLY A 33 1 ? 25 HELX_P HELX_P2 AA2 ASP A 36 ? LEU A 62 ? ASP A 36 LEU A 62 1 ? 27 HELX_P HELX_P3 AA3 TRP A 80 ? ASP A 102 ? TRP A 80 ASP A 102 1 ? 23 HELX_P HELX_P4 AA4 ASP A 104 ? THR A 128 ? ASP A 104 THR A 128 1 ? 25 HELX_P HELX_P5 AA5 VAL A 130 ? PHE A 154 ? VAL A 130 PHE A 154 1 ? 25 HELX_P HELX_P6 AA6 PHE A 154 ? GLU A 161 ? PHE A 154 GLU A 161 1 ? 8 HELX_P HELX_P7 AA7 ARG A 164 ? GLY A 192 ? ARG A 164 GLY A 192 1 ? 29 HELX_P HELX_P8 AA8 PRO A 200 ? ARG A 225 ? PRO A 200 ARG A 225 1 ? 26 HELX_P HELX_P9 AA9 SER A 226 ? PHE A 230 ? SER A 226 PHE A 230 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 66 ? PHE A 71 ? LEU A 66 PHE A 71 AA1 2 GLU A 74 ? TYR A 79 ? GLU A 74 TYR A 79 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id THR _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 67 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id THR _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 67 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ILE _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 78 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 78 # _atom_sites.entry_id 7VSO _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.021645 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009709 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007770 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol BR C I N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 GLN 3 3 ? ? ? A . n A 1 4 ILE 4 4 ? ? ? A . n A 1 5 THR 5 5 ? ? ? A . n A 1 6 GLY 6 6 ? ? ? A . n A 1 7 ARG 7 7 7 ARG ARG A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 TRP 10 10 10 TRP TRP A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 TRP 12 12 12 TRP TRP A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 MET 20 20 20 MET MET A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 TYR 26 26 26 TYR TYR A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 MET 32 32 32 MET MET A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 MET 56 56 56 MET MET A . n A 1 57 TYR 57 57 57 TYR TYR A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 MET 60 60 60 MET MET A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 TYR 64 64 64 TYR TYR A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 MET 68 68 68 MET MET A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 GLN 75 75 75 GLN GLN A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 TYR 79 79 79 TYR TYR A . n A 1 80 TRP 80 80 80 TRP TRP A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 TYR 83 83 83 TYR TYR A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 TRP 86 86 86 TRP TRP A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 PHE 88 88 88 PHE PHE A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 ASP 96 96 96 ASP ASP A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 ASP 115 115 115 ASP ASP A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 MET 118 118 118 MET MET A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 VAL 124 124 124 VAL VAL A . n A 1 125 GLY 125 125 125 GLY GLY A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 THR 128 128 128 THR THR A . n A 1 129 LYS 129 129 129 LYS LYS A . n A 1 130 VAL 130 130 130 VAL VAL A . n A 1 131 TYR 131 131 131 TYR TYR A . n A 1 132 SER 132 132 132 SER SER A . n A 1 133 TYR 133 133 133 TYR TYR A . n A 1 134 ARG 134 134 134 ARG ARG A . n A 1 135 PHE 135 135 135 PHE PHE A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 TRP 137 137 137 TRP TRP A . n A 1 138 TRP 138 138 138 TRP TRP A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 ILE 140 140 140 ILE ILE A . n A 1 141 SER 141 141 141 SER SER A . n A 1 142 THR 142 142 142 THR THR A . n A 1 143 ALA 143 143 143 ALA ALA A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 MET 145 145 145 MET MET A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 TYR 147 147 147 TYR TYR A . n A 1 148 ILE 148 148 148 ILE ILE A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 TYR 150 150 150 TYR TYR A . n A 1 151 VAL 151 151 151 VAL VAL A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 PHE 153 153 153 PHE PHE A . n A 1 154 PHE 154 154 154 PHE PHE A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 PHE 156 156 156 PHE PHE A . n A 1 157 THR 157 157 157 THR THR A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 LYS 159 159 159 LYS LYS A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 GLU 161 161 161 GLU GLU A . n A 1 162 SER 162 162 162 SER SER A . n A 1 163 MET 163 163 163 MET MET A . n A 1 164 ARG 164 164 164 ARG ARG A . n A 1 165 PRO 165 165 165 PRO PRO A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 VAL 167 167 167 VAL VAL A . n A 1 168 ALA 168 168 168 ALA ALA A . n A 1 169 SER 169 169 169 SER SER A . n A 1 170 THR 170 170 170 THR THR A . n A 1 171 PHE 171 171 171 PHE PHE A . n A 1 172 LYS 172 172 172 LYS LYS A . n A 1 173 VAL 173 173 173 VAL VAL A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 ARG 175 175 175 ARG ARG A . n A 1 176 ASN 176 176 176 ASN ASN A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 THR 178 178 178 THR THR A . n A 1 179 VAL 179 179 179 VAL VAL A . n A 1 180 VAL 180 180 180 VAL VAL A . n A 1 181 LEU 181 181 181 LEU LEU A . n A 1 182 TRP 182 182 182 TRP TRP A . n A 1 183 SER 183 183 183 SER SER A . n A 1 184 ALA 184 184 184 ALA ALA A . n A 1 185 TYR 185 185 185 TYR TYR A . n A 1 186 PRO 186 186 186 PRO PRO A . n A 1 187 VAL 187 187 187 VAL VAL A . n A 1 188 VAL 188 188 188 VAL VAL A . n A 1 189 TRP 189 189 189 TRP TRP A . n A 1 190 LEU 190 190 190 LEU LEU A . n A 1 191 ILE 191 191 191 ILE ILE A . n A 1 192 GLY 192 192 192 GLY GLY A . n A 1 193 SER 193 193 193 SER SER A . n A 1 194 GLU 194 194 194 GLU GLU A . n A 1 195 GLY 195 195 195 GLY GLY A . n A 1 196 ALA 196 196 196 ALA ALA A . n A 1 197 GLY 197 197 197 GLY GLY A . n A 1 198 ILE 198 198 198 ILE ILE A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 PRO 200 200 200 PRO PRO A . n A 1 201 LEU 201 201 201 LEU LEU A . n A 1 202 ASN 202 202 202 ASN ASN A . n A 1 203 ILE 203 203 203 ILE ILE A . n A 1 204 GLU 204 204 204 GLU GLU A . n A 1 205 THR 205 205 205 THR THR A . n A 1 206 LEU 206 206 206 LEU LEU A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 PHE 208 208 208 PHE PHE A . n A 1 209 MET 209 209 209 MET MET A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 ASP 212 212 212 ASP ASP A . n A 1 213 VAL 213 213 213 VAL VAL A . n A 1 214 SER 214 214 214 SER SER A . n A 1 215 ALA 215 215 215 ALA ALA A . n A 1 216 LYS 216 216 216 LYS LYS A . n A 1 217 VAL 217 217 217 VAL VAL A . n A 1 218 GLY 218 218 218 GLY GLY A . n A 1 219 PHE 219 219 219 PHE PHE A . n A 1 220 GLY 220 220 220 GLY GLY A . n A 1 221 LEU 221 221 221 LEU LEU A . n A 1 222 ILE 222 222 222 ILE ILE A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 LEU 224 224 224 LEU LEU A . n A 1 225 ARG 225 225 225 ARG ARG A . n A 1 226 SER 226 226 226 SER SER A . n A 1 227 ARG 227 227 227 ARG ARG A . n A 1 228 ALA 228 228 228 ALA ALA A . n A 1 229 ILE 229 229 229 ILE ILE A . n A 1 230 PHE 230 230 230 PHE PHE A . n A 1 231 GLY 231 231 ? ? ? A . n A 1 232 GLU 232 232 ? ? ? A . n A 1 233 ALA 233 233 ? ? ? A . n A 1 234 GLU 234 234 ? ? ? A . n A 1 235 ALA 235 235 ? ? ? A . n A 1 236 PRO 236 236 ? ? ? A . n A 1 237 GLU 237 237 ? ? ? A . n A 1 238 PRO 238 238 ? ? ? A . n A 1 239 SER 239 239 ? ? ? A . n A 1 240 ALA 240 240 ? ? ? A . n A 1 241 GLY 241 241 ? ? ? A . n A 1 242 ASP 242 242 ? ? ? A . n A 1 243 GLY 243 243 ? ? ? A . n A 1 244 ALA 244 244 ? ? ? A . n A 1 245 ALA 245 245 ? ? ? A . n A 1 246 ALA 246 246 ? ? ? A . n A 1 247 THR 247 247 ? ? ? A . n A 1 248 SER 248 248 ? ? ? A . n A 1 249 ASP 249 249 ? ? ? A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email mizohata@chem.eng.osaka-u.ac.jp _pdbx_contact_author.name_first Eiichi _pdbx_contact_author.name_last Mizohata _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-5526-5343 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET 1 301 300 RET RET A . C 3 7YH 1 302 1 7YH UNL A . D 4 IOD 1 303 1 IOD IOD A . E 5 CPS 1 304 10 CPS CPS A . F 6 OCT 1 305 200 OCT OCT A . G 7 HP6 1 306 254 HP6 HP6 A . H 8 D12 1 307 256 D12 D12 A . I 9 R16 1 308 407 R16 R16 A . J 10 D10 1 309 408 D10 D10 A . K 9 R16 1 310 411 R16 R16 A . L 7 HP6 1 311 401 HP6 HP6 A . M 10 D10 1 312 250 D10 D10 A . N 7 HP6 1 313 251 HP6 HP6 A . O 7 HP6 1 314 252 HP6 HP6 A . P 11 DD9 1 315 253 DD9 DD9 A . Q 8 D12 1 316 255 D12 D12 A . R 8 D12 1 317 257 D12 D12 A . S 9 R16 1 318 259 R16 R16 A . T 7 HP6 1 319 260 HP6 HP6 A . U 6 OCT 1 320 261 OCT OCT A . V 12 HOH 1 401 533 HOH HOH A . V 12 HOH 2 402 401 HOH HOH A . V 12 HOH 3 403 402 HOH HOH A . V 12 HOH 4 404 400 HOH HOH A . V 12 HOH 5 405 403 HOH HOH A . V 12 HOH 6 406 548 HOH HOH A . V 12 HOH 7 407 419 HOH HOH A . V 12 HOH 8 408 423 HOH HOH A . V 12 HOH 9 409 545 HOH HOH A . V 12 HOH 10 410 549 HOH HOH A . V 12 HOH 11 411 537 HOH HOH A . V 12 HOH 12 412 418 HOH HOH A . V 12 HOH 13 413 532 HOH HOH A . V 12 HOH 14 414 501 HOH HOH A . V 12 HOH 15 415 530 HOH HOH A . V 12 HOH 16 416 527 HOH HOH A . V 12 HOH 17 417 404 HOH HOH A . V 12 HOH 18 418 529 HOH HOH A . V 12 HOH 19 419 531 HOH HOH A . V 12 HOH 20 420 542 HOH HOH A . V 12 HOH 21 421 522 HOH HOH A . V 12 HOH 22 422 526 HOH HOH A . V 12 HOH 23 423 543 HOH HOH A . V 12 HOH 24 424 523 HOH HOH A . V 12 HOH 25 425 546 HOH HOH A . V 12 HOH 26 426 535 HOH HOH A . V 12 HOH 27 427 429 HOH HOH A . V 12 HOH 28 428 528 HOH HOH A . V 12 HOH 29 429 524 HOH HOH A . V 12 HOH 30 430 539 HOH HOH A . V 12 HOH 31 431 540 HOH HOH A . V 12 HOH 32 432 547 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6140 ? 1 MORE -64 ? 1 'SSA (A^2)' 18850 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_565 x,-y+1,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 103.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 431 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id V _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-02-16 2 'Structure model' 1 1 2023-09-06 3 'Structure model' 1 2 2023-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' pdbx_related_exp_data_set 4 3 'Structure model' pdbx_initial_refinement_model # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0131 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? CrystFEL ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? CrystFEL ? ? ? . 3 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 4 # _pdbx_entry_details.entry_id 7VSO _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NZ A LYS 216 ? ? C15 A RET 301 ? ? 1.19 2 1 NZ A LYS 216 ? ? C14 A RET 301 ? ? 2.08 3 1 CE A LYS 216 ? ? C15 A RET 301 ? ? 2.14 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 85 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 85 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 85 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 125.08 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 6.78 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A RET 301 ? O1 ? B RET 1 O1 2 1 N 1 A CPS 304 ? C25 ? E CPS 1 C25 3 1 N 1 A CPS 304 ? C26 ? E CPS 1 C26 4 1 N 1 A CPS 304 ? C27 ? E CPS 1 C27 5 1 N 1 A CPS 304 ? C28 ? E CPS 1 C28 6 1 N 1 A CPS 304 ? C29 ? E CPS 1 C29 7 1 N 1 A CPS 304 ? C30 ? E CPS 1 C30 8 1 N 1 A CPS 304 ? C31 ? E CPS 1 C31 9 1 N 1 A CPS 304 ? C32 ? E CPS 1 C32 10 1 N 1 A CPS 304 ? N1 ? E CPS 1 N1 11 1 N 1 A CPS 304 ? N2 ? E CPS 1 N2 12 1 N 1 A CPS 304 ? O1 ? E CPS 1 O1 13 1 N 1 A CPS 304 ? O2S ? E CPS 1 O2S 14 1 N 1 A CPS 304 ? O3S ? E CPS 1 O3S 15 1 N 1 A CPS 304 ? O1S ? E CPS 1 O1S 16 1 N 1 A CPS 304 ? S ? E CPS 1 S # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 1 ? A GLN 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A GLN 3 ? A GLN 3 4 1 Y 1 A ILE 4 ? A ILE 4 5 1 Y 1 A THR 5 ? A THR 5 6 1 Y 1 A GLY 6 ? A GLY 6 7 1 Y 1 A GLY 231 ? A GLY 231 8 1 Y 1 A GLU 232 ? A GLU 232 9 1 Y 1 A ALA 233 ? A ALA 233 10 1 Y 1 A GLU 234 ? A GLU 234 11 1 Y 1 A ALA 235 ? A ALA 235 12 1 Y 1 A PRO 236 ? A PRO 236 13 1 Y 1 A GLU 237 ? A GLU 237 14 1 Y 1 A PRO 238 ? A PRO 238 15 1 Y 1 A SER 239 ? A SER 239 16 1 Y 1 A ALA 240 ? A ALA 240 17 1 Y 1 A GLY 241 ? A GLY 241 18 1 Y 1 A ASP 242 ? A ASP 242 19 1 Y 1 A GLY 243 ? A GLY 243 20 1 Y 1 A ALA 244 ? A ALA 244 21 1 Y 1 A ALA 245 ? A ALA 245 22 1 Y 1 A ALA 246 ? A ALA 246 23 1 Y 1 A THR 247 ? A THR 247 24 1 Y 1 A SER 248 ? A SER 248 25 1 Y 1 A ASP 249 ? A ASP 249 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 7YH O14 O N N 1 7YH P13 P N N 2 7YH O15 O N N 3 7YH O16 O N N 4 7YH C17 C N N 5 7YH C18 C N N 6 7YH N19 N N N 7 7YH C22 C N N 8 7YH C21 C N N 9 7YH C20 C N N 10 7YH O12 O N N 11 7YH C11 C N N 12 7YH C10 C N R 13 7YH O9 O N N 14 7YH C7 C N N 15 7YH O8 O N N 16 7YH C6 C Y N 17 7YH C5 C Y N 18 7YH C4 C Y N 19 7YH BR1 BR N N 20 7YH C3 C Y N 21 7YH C1 C Y N 22 7YH C2 C Y N 23 7YH I1 I N N 24 7YH C23 C N N 25 7YH O24 O N N 26 7YH C25 C N N 27 7YH O26 O N N 28 7YH C27 C N N 29 7YH C28 C N N 30 7YH C29 C N N 31 7YH C30 C N N 32 7YH C31 C N N 33 7YH C32 C N N 34 7YH C33 C N N 35 7YH C34 C N N 36 7YH C35 C N N 37 7YH C36 C N N 38 7YH C37 C N N 39 7YH C38 C N N 40 7YH C39 C N N 41 7YH H1 H N N 42 7YH H2 H N N 43 7YH H3 H N N 44 7YH H4 H N N 45 7YH H5 H N N 46 7YH H6 H N N 47 7YH H7 H N N 48 7YH H8 H N N 49 7YH H9 H N N 50 7YH H10 H N N 51 7YH H11 H N N 52 7YH H12 H N N 53 7YH H13 H N N 54 7YH H14 H N N 55 7YH H15 H N N 56 7YH H16 H N N 57 7YH H17 H N N 58 7YH H18 H N N 59 7YH H19 H N N 60 7YH H20 H N N 61 7YH H21 H N N 62 7YH H22 H N N 63 7YH H23 H N N 64 7YH H24 H N N 65 7YH H25 H N N 66 7YH H26 H N N 67 7YH H27 H N N 68 7YH H28 H N N 69 7YH H29 H N N 70 7YH H30 H N N 71 7YH H31 H N N 72 7YH H32 H N N 73 7YH H33 H N N 74 7YH H34 H N N 75 7YH H35 H N N 76 7YH H36 H N N 77 7YH H37 H N N 78 7YH H38 H N N 79 7YH H39 H N N 80 7YH H40 H N N 81 7YH H41 H N N 82 7YH H42 H N N 83 7YH H43 H N N 84 7YH H44 H N N 85 7YH H45 H N N 86 7YH H46 H N N 87 7YH H47 H N N 88 7YH H48 H N N 89 7YH H49 H N N 90 ALA N N N N 91 ALA CA C N S 92 ALA C C N N 93 ALA O O N N 94 ALA CB C N N 95 ALA OXT O N N 96 ALA H H N N 97 ALA H2 H N N 98 ALA HA H N N 99 ALA HB1 H N N 100 ALA HB2 H N N 101 ALA HB3 H N N 102 ALA HXT H N N 103 ARG N N N N 104 ARG CA C N S 105 ARG C C N N 106 ARG O O N N 107 ARG CB C N N 108 ARG CG C N N 109 ARG CD C N N 110 ARG NE N N N 111 ARG CZ C N N 112 ARG NH1 N N N 113 ARG NH2 N N N 114 ARG OXT O N N 115 ARG H H N N 116 ARG H2 H N N 117 ARG HA H N N 118 ARG HB2 H N N 119 ARG HB3 H N N 120 ARG HG2 H N N 121 ARG HG3 H N N 122 ARG HD2 H N N 123 ARG HD3 H N N 124 ARG HE H N N 125 ARG HH11 H N N 126 ARG HH12 H N N 127 ARG HH21 H N N 128 ARG HH22 H N N 129 ARG HXT H N N 130 ASN N N N N 131 ASN CA C N S 132 ASN C C N N 133 ASN O O N N 134 ASN CB C N N 135 ASN CG C N N 136 ASN OD1 O N N 137 ASN ND2 N N N 138 ASN OXT O N N 139 ASN H H N N 140 ASN H2 H N N 141 ASN HA H N N 142 ASN HB2 H N N 143 ASN HB3 H N N 144 ASN HD21 H N N 145 ASN HD22 H N N 146 ASN HXT H N N 147 ASP N N N N 148 ASP CA C N S 149 ASP C C N N 150 ASP O O N N 151 ASP CB C N N 152 ASP CG C N N 153 ASP OD1 O N N 154 ASP OD2 O N N 155 ASP OXT O N N 156 ASP H H N N 157 ASP H2 H N N 158 ASP HA H N N 159 ASP HB2 H N N 160 ASP HB3 H N N 161 ASP HD2 H N N 162 ASP HXT H N N 163 CPS C1 C N N 164 CPS C2 C N S 165 CPS C3 C N N 166 CPS C4 C N S 167 CPS C5 C N R 168 CPS C6 C N S 169 CPS C7 C N N 170 CPS C8 C N N 171 CPS C9 C N R 172 CPS C10 C N N 173 CPS C11 C N N 174 CPS C12 C N N 175 CPS C13 C N R 176 CPS C14 C N N 177 CPS C15 C N S 178 CPS C16 C N N 179 CPS C17 C N R 180 CPS C18 C N R 181 CPS C19 C N S 182 CPS C20 C N R 183 CPS C21 C N N 184 CPS C22 C N N 185 CPS C23 C N N 186 CPS C24 C N N 187 CPS C25 C N N 188 CPS C26 C N N 189 CPS C27 C N N 190 CPS C28 C N N 191 CPS C29 C N N 192 CPS C30 C N N 193 CPS C31 C N N 194 CPS C32 C N N 195 CPS N1 N N N 196 CPS N2 N N N 197 CPS O1 O N N 198 CPS O2 O N N 199 CPS O3 O N N 200 CPS O4 O N N 201 CPS O2S O N N 202 CPS O3S O N N 203 CPS O1S O N N 204 CPS S S N N 205 CPS H1 H N N 206 CPS H1A H N N 207 CPS H3 H N N 208 CPS H3A H N N 209 CPS H4 H N N 210 CPS H6 H N N 211 CPS H7 H N N 212 CPS H7A H N N 213 CPS H8 H N N 214 CPS H8A H N N 215 CPS H9 H N N 216 CPS H10 H N N 217 CPS H10A H N N 218 CPS H10B H N N 219 CPS H11 H N N 220 CPS H11A H N N 221 CPS H11B H N N 222 CPS H12 H N N 223 CPS H12A H N N 224 CPS H13 H N N 225 CPS H14 H N N 226 CPS H14A H N N 227 CPS H15 H N N 228 CPS H16 H N N 229 CPS H16A H N N 230 CPS H17 H N N 231 CPS H18 H N N 232 CPS H19 H N N 233 CPS H20 H N N 234 CPS H21 H N N 235 CPS H21A H N N 236 CPS H21B H N N 237 CPS H22 H N N 238 CPS H22A H N N 239 CPS H23 H N N 240 CPS H23A H N N 241 CPS H25 H N N 242 CPS H25A H N N 243 CPS H261 H N N 244 CPS H271 H N N 245 CPS H28 H N N 246 CPS H28A H N N 247 CPS H28B H N N 248 CPS H29 H N N 249 CPS H29A H N N 250 CPS H29B H N N 251 CPS H30 H N N 252 CPS H30A H N N 253 CPS H31 H N N 254 CPS H31A H N N 255 CPS H32 H N N 256 CPS H32A H N N 257 CPS HN1 H N N 258 CPS HO2 H N N 259 CPS HO3 H N N 260 CPS HO4 H N N 261 CPS H272 H N N 262 CPS H262 H N N 263 D10 C1 C N N 264 D10 C2 C N N 265 D10 C3 C N N 266 D10 C4 C N N 267 D10 C5 C N N 268 D10 C6 C N N 269 D10 C7 C N N 270 D10 C8 C N N 271 D10 C9 C N N 272 D10 C10 C N N 273 D10 H11 H N N 274 D10 H12 H N N 275 D10 H13 H N N 276 D10 H21 H N N 277 D10 H22 H N N 278 D10 H31 H N N 279 D10 H32 H N N 280 D10 H41 H N N 281 D10 H42 H N N 282 D10 H51 H N N 283 D10 H52 H N N 284 D10 H61 H N N 285 D10 H62 H N N 286 D10 H71 H N N 287 D10 H72 H N N 288 D10 H81 H N N 289 D10 H82 H N N 290 D10 H91 H N N 291 D10 H92 H N N 292 D10 H101 H N N 293 D10 H102 H N N 294 D10 H103 H N N 295 D12 C1 C N N 296 D12 C2 C N N 297 D12 C3 C N N 298 D12 C4 C N N 299 D12 C5 C N N 300 D12 C6 C N N 301 D12 C7 C N N 302 D12 C8 C N N 303 D12 C9 C N N 304 D12 C10 C N N 305 D12 C11 C N N 306 D12 C12 C N N 307 D12 H11 H N N 308 D12 H12 H N N 309 D12 H13 H N N 310 D12 H21 H N N 311 D12 H22 H N N 312 D12 H31 H N N 313 D12 H32 H N N 314 D12 H41 H N N 315 D12 H42 H N N 316 D12 H51 H N N 317 D12 H52 H N N 318 D12 H61 H N N 319 D12 H62 H N N 320 D12 H71 H N N 321 D12 H72 H N N 322 D12 H81 H N N 323 D12 H82 H N N 324 D12 H91 H N N 325 D12 H92 H N N 326 D12 H101 H N N 327 D12 H102 H N N 328 D12 H111 H N N 329 D12 H112 H N N 330 D12 H121 H N N 331 D12 H122 H N N 332 D12 H123 H N N 333 DD9 C1 C N N 334 DD9 C2 C N N 335 DD9 C3 C N N 336 DD9 C4 C N N 337 DD9 C5 C N N 338 DD9 C6 C N N 339 DD9 C7 C N N 340 DD9 C8 C N N 341 DD9 C9 C N N 342 DD9 H1 H N N 343 DD9 H1A H N N 344 DD9 H1B H N N 345 DD9 H2 H N N 346 DD9 H2A H N N 347 DD9 H3 H N N 348 DD9 H3A H N N 349 DD9 H4 H N N 350 DD9 H4A H N N 351 DD9 H5 H N N 352 DD9 H5A H N N 353 DD9 H6 H N N 354 DD9 H6A H N N 355 DD9 H7 H N N 356 DD9 H7A H N N 357 DD9 H8 H N N 358 DD9 H8A H N N 359 DD9 H9 H N N 360 DD9 H9A H N N 361 DD9 H9B H N N 362 GLN N N N N 363 GLN CA C N S 364 GLN C C N N 365 GLN O O N N 366 GLN CB C N N 367 GLN CG C N N 368 GLN CD C N N 369 GLN OE1 O N N 370 GLN NE2 N N N 371 GLN OXT O N N 372 GLN H H N N 373 GLN H2 H N N 374 GLN HA H N N 375 GLN HB2 H N N 376 GLN HB3 H N N 377 GLN HG2 H N N 378 GLN HG3 H N N 379 GLN HE21 H N N 380 GLN HE22 H N N 381 GLN HXT H N N 382 GLU N N N N 383 GLU CA C N S 384 GLU C C N N 385 GLU O O N N 386 GLU CB C N N 387 GLU CG C N N 388 GLU CD C N N 389 GLU OE1 O N N 390 GLU OE2 O N N 391 GLU OXT O N N 392 GLU H H N N 393 GLU H2 H N N 394 GLU HA H N N 395 GLU HB2 H N N 396 GLU HB3 H N N 397 GLU HG2 H N N 398 GLU HG3 H N N 399 GLU HE2 H N N 400 GLU HXT H N N 401 GLY N N N N 402 GLY CA C N N 403 GLY C C N N 404 GLY O O N N 405 GLY OXT O N N 406 GLY H H N N 407 GLY H2 H N N 408 GLY HA2 H N N 409 GLY HA3 H N N 410 GLY HXT H N N 411 HOH O O N N 412 HOH H1 H N N 413 HOH H2 H N N 414 HP6 C20 C N N 415 HP6 C21 C N N 416 HP6 C22 C N N 417 HP6 C23 C N N 418 HP6 C24 C N N 419 HP6 C25 C N N 420 HP6 C26 C N N 421 HP6 H201 H N N 422 HP6 H202 H N N 423 HP6 H203 H N N 424 HP6 H211 H N N 425 HP6 H212 H N N 426 HP6 H221 H N N 427 HP6 H222 H N N 428 HP6 H231 H N N 429 HP6 H232 H N N 430 HP6 H241 H N N 431 HP6 H242 H N N 432 HP6 H251 H N N 433 HP6 H252 H N N 434 HP6 H261 H N N 435 HP6 H262 H N N 436 HP6 H263 H N N 437 ILE N N N N 438 ILE CA C N S 439 ILE C C N N 440 ILE O O N N 441 ILE CB C N S 442 ILE CG1 C N N 443 ILE CG2 C N N 444 ILE CD1 C N N 445 ILE OXT O N N 446 ILE H H N N 447 ILE H2 H N N 448 ILE HA H N N 449 ILE HB H N N 450 ILE HG12 H N N 451 ILE HG13 H N N 452 ILE HG21 H N N 453 ILE HG22 H N N 454 ILE HG23 H N N 455 ILE HD11 H N N 456 ILE HD12 H N N 457 ILE HD13 H N N 458 ILE HXT H N N 459 IOD I I N N 460 LEU N N N N 461 LEU CA C N S 462 LEU C C N N 463 LEU O O N N 464 LEU CB C N N 465 LEU CG C N N 466 LEU CD1 C N N 467 LEU CD2 C N N 468 LEU OXT O N N 469 LEU H H N N 470 LEU H2 H N N 471 LEU HA H N N 472 LEU HB2 H N N 473 LEU HB3 H N N 474 LEU HG H N N 475 LEU HD11 H N N 476 LEU HD12 H N N 477 LEU HD13 H N N 478 LEU HD21 H N N 479 LEU HD22 H N N 480 LEU HD23 H N N 481 LEU HXT H N N 482 LYS N N N N 483 LYS CA C N S 484 LYS C C N N 485 LYS O O N N 486 LYS CB C N N 487 LYS CG C N N 488 LYS CD C N N 489 LYS CE C N N 490 LYS NZ N N N 491 LYS OXT O N N 492 LYS H H N N 493 LYS H2 H N N 494 LYS HA H N N 495 LYS HB2 H N N 496 LYS HB3 H N N 497 LYS HG2 H N N 498 LYS HG3 H N N 499 LYS HD2 H N N 500 LYS HD3 H N N 501 LYS HE2 H N N 502 LYS HE3 H N N 503 LYS HZ1 H N N 504 LYS HZ2 H N N 505 LYS HZ3 H N N 506 LYS HXT H N N 507 MET N N N N 508 MET CA C N S 509 MET C C N N 510 MET O O N N 511 MET CB C N N 512 MET CG C N N 513 MET SD S N N 514 MET CE C N N 515 MET OXT O N N 516 MET H H N N 517 MET H2 H N N 518 MET HA H N N 519 MET HB2 H N N 520 MET HB3 H N N 521 MET HG2 H N N 522 MET HG3 H N N 523 MET HE1 H N N 524 MET HE2 H N N 525 MET HE3 H N N 526 MET HXT H N N 527 OCT C1 C N N 528 OCT C2 C N N 529 OCT C3 C N N 530 OCT C4 C N N 531 OCT C5 C N N 532 OCT C6 C N N 533 OCT C7 C N N 534 OCT C8 C N N 535 OCT H11 H N N 536 OCT H12 H N N 537 OCT H13 H N N 538 OCT H21 H N N 539 OCT H22 H N N 540 OCT H31 H N N 541 OCT H32 H N N 542 OCT H41 H N N 543 OCT H42 H N N 544 OCT H51 H N N 545 OCT H52 H N N 546 OCT H61 H N N 547 OCT H62 H N N 548 OCT H71 H N N 549 OCT H72 H N N 550 OCT H81 H N N 551 OCT H82 H N N 552 OCT H83 H N N 553 PHE N N N N 554 PHE CA C N S 555 PHE C C N N 556 PHE O O N N 557 PHE CB C N N 558 PHE CG C Y N 559 PHE CD1 C Y N 560 PHE CD2 C Y N 561 PHE CE1 C Y N 562 PHE CE2 C Y N 563 PHE CZ C Y N 564 PHE OXT O N N 565 PHE H H N N 566 PHE H2 H N N 567 PHE HA H N N 568 PHE HB2 H N N 569 PHE HB3 H N N 570 PHE HD1 H N N 571 PHE HD2 H N N 572 PHE HE1 H N N 573 PHE HE2 H N N 574 PHE HZ H N N 575 PHE HXT H N N 576 PRO N N N N 577 PRO CA C N S 578 PRO C C N N 579 PRO O O N N 580 PRO CB C N N 581 PRO CG C N N 582 PRO CD C N N 583 PRO OXT O N N 584 PRO H H N N 585 PRO HA H N N 586 PRO HB2 H N N 587 PRO HB3 H N N 588 PRO HG2 H N N 589 PRO HG3 H N N 590 PRO HD2 H N N 591 PRO HD3 H N N 592 PRO HXT H N N 593 R16 C27 C N N 594 R16 C28 C N N 595 R16 C29 C N N 596 R16 C30 C N N 597 R16 C31 C N N 598 R16 C32 C N N 599 R16 C33 C N N 600 R16 C34 C N N 601 R16 C35 C N N 602 R16 C36 C N N 603 R16 C37 C N N 604 R16 C38 C N N 605 R16 C39 C N N 606 R16 C40 C N N 607 R16 C41 C N N 608 R16 C42 C N N 609 R16 H271 H N N 610 R16 H272 H N N 611 R16 H273 H N N 612 R16 H281 H N N 613 R16 H282 H N N 614 R16 H291 H N N 615 R16 H292 H N N 616 R16 H301 H N N 617 R16 H302 H N N 618 R16 H311 H N N 619 R16 H312 H N N 620 R16 H321 H N N 621 R16 H322 H N N 622 R16 H331 H N N 623 R16 H332 H N N 624 R16 H341 H N N 625 R16 H342 H N N 626 R16 H351 H N N 627 R16 H352 H N N 628 R16 H361 H N N 629 R16 H362 H N N 630 R16 H371 H N N 631 R16 H372 H N N 632 R16 H381 H N N 633 R16 H382 H N N 634 R16 H391 H N N 635 R16 H392 H N N 636 R16 H401 H N N 637 R16 H402 H N N 638 R16 H411 H N N 639 R16 H412 H N N 640 R16 H421 H N N 641 R16 H422 H N N 642 R16 H423 H N N 643 RET C1 C N N 644 RET C2 C N N 645 RET C3 C N N 646 RET C4 C N N 647 RET C5 C N N 648 RET C6 C N N 649 RET C7 C N N 650 RET C8 C N N 651 RET C9 C N N 652 RET C10 C N N 653 RET C11 C N N 654 RET C12 C N N 655 RET C13 C N N 656 RET C14 C N N 657 RET C15 C N N 658 RET O1 O N N 659 RET C16 C N N 660 RET C17 C N N 661 RET C18 C N N 662 RET C19 C N N 663 RET C20 C N N 664 RET H21 H N N 665 RET H22 H N N 666 RET H31 H N N 667 RET H32 H N N 668 RET H41 H N N 669 RET H42 H N N 670 RET H7 H N N 671 RET H8 H N N 672 RET H10 H N N 673 RET H11 H N N 674 RET H12 H N N 675 RET H14 H N N 676 RET H15 H N N 677 RET H161 H N N 678 RET H162 H N N 679 RET H163 H N N 680 RET H171 H N N 681 RET H172 H N N 682 RET H173 H N N 683 RET H181 H N N 684 RET H182 H N N 685 RET H183 H N N 686 RET H191 H N N 687 RET H192 H N N 688 RET H193 H N N 689 RET H201 H N N 690 RET H202 H N N 691 RET H203 H N N 692 SER N N N N 693 SER CA C N S 694 SER C C N N 695 SER O O N N 696 SER CB C N N 697 SER OG O N N 698 SER OXT O N N 699 SER H H N N 700 SER H2 H N N 701 SER HA H N N 702 SER HB2 H N N 703 SER HB3 H N N 704 SER HG H N N 705 SER HXT H N N 706 THR N N N N 707 THR CA C N S 708 THR C C N N 709 THR O O N N 710 THR CB C N R 711 THR OG1 O N N 712 THR CG2 C N N 713 THR OXT O N N 714 THR H H N N 715 THR H2 H N N 716 THR HA H N N 717 THR HB H N N 718 THR HG1 H N N 719 THR HG21 H N N 720 THR HG22 H N N 721 THR HG23 H N N 722 THR HXT H N N 723 TRP N N N N 724 TRP CA C N S 725 TRP C C N N 726 TRP O O N N 727 TRP CB C N N 728 TRP CG C Y N 729 TRP CD1 C Y N 730 TRP CD2 C Y N 731 TRP NE1 N Y N 732 TRP CE2 C Y N 733 TRP CE3 C Y N 734 TRP CZ2 C Y N 735 TRP CZ3 C Y N 736 TRP CH2 C Y N 737 TRP OXT O N N 738 TRP H H N N 739 TRP H2 H N N 740 TRP HA H N N 741 TRP HB2 H N N 742 TRP HB3 H N N 743 TRP HD1 H N N 744 TRP HE1 H N N 745 TRP HE3 H N N 746 TRP HZ2 H N N 747 TRP HZ3 H N N 748 TRP HH2 H N N 749 TRP HXT H N N 750 TYR N N N N 751 TYR CA C N S 752 TYR C C N N 753 TYR O O N N 754 TYR CB C N N 755 TYR CG C Y N 756 TYR CD1 C Y N 757 TYR CD2 C Y N 758 TYR CE1 C Y N 759 TYR CE2 C Y N 760 TYR CZ C Y N 761 TYR OH O N N 762 TYR OXT O N N 763 TYR H H N N 764 TYR H2 H N N 765 TYR HA H N N 766 TYR HB2 H N N 767 TYR HB3 H N N 768 TYR HD1 H N N 769 TYR HD2 H N N 770 TYR HE1 H N N 771 TYR HE2 H N N 772 TYR HH H N N 773 TYR HXT H N N 774 VAL N N N N 775 VAL CA C N S 776 VAL C C N N 777 VAL O O N N 778 VAL CB C N N 779 VAL CG1 C N N 780 VAL CG2 C N N 781 VAL OXT O N N 782 VAL H H N N 783 VAL H2 H N N 784 VAL HA H N N 785 VAL HB H N N 786 VAL HG11 H N N 787 VAL HG12 H N N 788 VAL HG13 H N N 789 VAL HG21 H N N 790 VAL HG22 H N N 791 VAL HG23 H N N 792 VAL HXT H N N 793 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7YH C39 C38 sing N N 1 7YH C38 C37 sing N N 2 7YH C37 C36 sing N N 3 7YH C36 C35 sing N N 4 7YH C35 C34 sing N N 5 7YH C34 C33 sing N N 6 7YH C33 C32 sing N N 7 7YH C32 C31 sing N N 8 7YH C31 C30 sing N N 9 7YH C30 C29 sing N N 10 7YH C29 C28 sing N N 11 7YH BR1 C4 sing N N 12 7YH C27 C28 sing N N 13 7YH C27 C25 sing N N 14 7YH C3 C4 doub Y N 15 7YH C3 C2 sing Y N 16 7YH C4 C5 sing Y N 17 7YH I1 C2 sing N N 18 7YH C2 C1 doub Y N 19 7YH C25 O26 doub N N 20 7YH C25 O24 sing N N 21 7YH C5 C6 doub Y N 22 7YH C1 C6 sing Y N 23 7YH C6 C7 sing N N 24 7YH O24 C23 sing N N 25 7YH C7 O9 sing N N 26 7YH C7 O8 doub N N 27 7YH O9 C10 sing N N 28 7YH C23 C10 sing N N 29 7YH C10 C11 sing N N 30 7YH C11 O12 sing N N 31 7YH O12 P13 sing N N 32 7YH O14 P13 doub N N 33 7YH P13 O15 sing N N 34 7YH P13 O16 sing N N 35 7YH O16 C17 sing N N 36 7YH C17 C18 sing N N 37 7YH C20 N19 sing N N 38 7YH C18 N19 sing N N 39 7YH N19 C22 sing N N 40 7YH N19 C21 sing N N 41 7YH O15 H1 sing N N 42 7YH C17 H2 sing N N 43 7YH C17 H3 sing N N 44 7YH C18 H4 sing N N 45 7YH C18 H5 sing N N 46 7YH C22 H6 sing N N 47 7YH C22 H7 sing N N 48 7YH C22 H8 sing N N 49 7YH C21 H9 sing N N 50 7YH C21 H10 sing N N 51 7YH C21 H11 sing N N 52 7YH C20 H12 sing N N 53 7YH C20 H13 sing N N 54 7YH C20 H14 sing N N 55 7YH C11 H15 sing N N 56 7YH C11 H16 sing N N 57 7YH C10 H17 sing N N 58 7YH C5 H18 sing N N 59 7YH C3 H19 sing N N 60 7YH C1 H20 sing N N 61 7YH C23 H21 sing N N 62 7YH C23 H22 sing N N 63 7YH C27 H23 sing N N 64 7YH C27 H24 sing N N 65 7YH C28 H25 sing N N 66 7YH C28 H26 sing N N 67 7YH C29 H27 sing N N 68 7YH C29 H28 sing N N 69 7YH C30 H29 sing N N 70 7YH C30 H30 sing N N 71 7YH C31 H31 sing N N 72 7YH C31 H32 sing N N 73 7YH C32 H33 sing N N 74 7YH C32 H34 sing N N 75 7YH C33 H35 sing N N 76 7YH C33 H36 sing N N 77 7YH C34 H37 sing N N 78 7YH C34 H38 sing N N 79 7YH C35 H39 sing N N 80 7YH C35 H40 sing N N 81 7YH C36 H41 sing N N 82 7YH C36 H42 sing N N 83 7YH C37 H43 sing N N 84 7YH C37 H44 sing N N 85 7YH C38 H45 sing N N 86 7YH C38 H46 sing N N 87 7YH C39 H47 sing N N 88 7YH C39 H48 sing N N 89 7YH C39 H49 sing N N 90 ALA N CA sing N N 91 ALA N H sing N N 92 ALA N H2 sing N N 93 ALA CA C sing N N 94 ALA CA CB sing N N 95 ALA CA HA sing N N 96 ALA C O doub N N 97 ALA C OXT sing N N 98 ALA CB HB1 sing N N 99 ALA CB HB2 sing N N 100 ALA CB HB3 sing N N 101 ALA OXT HXT sing N N 102 ARG N CA sing N N 103 ARG N H sing N N 104 ARG N H2 sing N N 105 ARG CA C sing N N 106 ARG CA CB sing N N 107 ARG CA HA sing N N 108 ARG C O doub N N 109 ARG C OXT sing N N 110 ARG CB CG sing N N 111 ARG CB HB2 sing N N 112 ARG CB HB3 sing N N 113 ARG CG CD sing N N 114 ARG CG HG2 sing N N 115 ARG CG HG3 sing N N 116 ARG CD NE sing N N 117 ARG CD HD2 sing N N 118 ARG CD HD3 sing N N 119 ARG NE CZ sing N N 120 ARG NE HE sing N N 121 ARG CZ NH1 sing N N 122 ARG CZ NH2 doub N N 123 ARG NH1 HH11 sing N N 124 ARG NH1 HH12 sing N N 125 ARG NH2 HH21 sing N N 126 ARG NH2 HH22 sing N N 127 ARG OXT HXT sing N N 128 ASN N CA sing N N 129 ASN N H sing N N 130 ASN N H2 sing N N 131 ASN CA C sing N N 132 ASN CA CB sing N N 133 ASN CA HA sing N N 134 ASN C O doub N N 135 ASN C OXT sing N N 136 ASN CB CG sing N N 137 ASN CB HB2 sing N N 138 ASN CB HB3 sing N N 139 ASN CG OD1 doub N N 140 ASN CG ND2 sing N N 141 ASN ND2 HD21 sing N N 142 ASN ND2 HD22 sing N N 143 ASN OXT HXT sing N N 144 ASP N CA sing N N 145 ASP N H sing N N 146 ASP N H2 sing N N 147 ASP CA C sing N N 148 ASP CA CB sing N N 149 ASP CA HA sing N N 150 ASP C O doub N N 151 ASP C OXT sing N N 152 ASP CB CG sing N N 153 ASP CB HB2 sing N N 154 ASP CB HB3 sing N N 155 ASP CG OD1 doub N N 156 ASP CG OD2 sing N N 157 ASP OD2 HD2 sing N N 158 ASP OXT HXT sing N N 159 CPS C1 C2 sing N N 160 CPS C1 C12 sing N N 161 CPS C2 C11 sing N N 162 CPS C2 C15 sing N N 163 CPS C2 C19 sing N N 164 CPS C3 C4 sing N N 165 CPS C3 C19 sing N N 166 CPS C4 C5 sing N N 167 CPS C4 O4 sing N N 168 CPS C5 C6 sing N N 169 CPS C5 C9 sing N N 170 CPS C5 C10 sing N N 171 CPS C6 C7 sing N N 172 CPS C6 C18 sing N N 173 CPS C7 C8 sing N N 174 CPS C8 C9 sing N N 175 CPS C9 C20 sing N N 176 CPS C12 C13 sing N N 177 CPS C13 C14 sing N N 178 CPS C13 O2 sing N N 179 CPS C14 C15 sing N N 180 CPS C15 C16 sing N N 181 CPS C16 C17 sing N N 182 CPS C17 C18 sing N N 183 CPS C17 O3 sing N N 184 CPS C18 C19 sing N N 185 CPS C20 C21 sing N N 186 CPS C20 C22 sing N N 187 CPS C22 C23 sing N N 188 CPS C23 C24 sing N N 189 CPS C24 N1 sing N N 190 CPS C24 O1 doub N N 191 CPS C25 C26 sing N N 192 CPS C25 N1 sing N N 193 CPS C26 C27 sing N N 194 CPS C27 N2 sing N N 195 CPS C28 N2 sing N N 196 CPS C29 N2 sing N N 197 CPS C30 C31 sing N N 198 CPS C30 N2 sing N N 199 CPS C31 C32 sing N N 200 CPS C32 S sing N N 201 CPS O2S S sing N N 202 CPS O3S S doub N N 203 CPS O1S S doub N N 204 CPS C1 H1 sing N N 205 CPS C1 H1A sing N N 206 CPS C3 H3 sing N N 207 CPS C3 H3A sing N N 208 CPS C4 H4 sing N N 209 CPS C6 H6 sing N N 210 CPS C7 H7 sing N N 211 CPS C7 H7A sing N N 212 CPS C8 H8 sing N N 213 CPS C8 H8A sing N N 214 CPS C9 H9 sing N N 215 CPS C10 H10 sing N N 216 CPS C10 H10A sing N N 217 CPS C10 H10B sing N N 218 CPS C11 H11 sing N N 219 CPS C11 H11A sing N N 220 CPS C11 H11B sing N N 221 CPS C12 H12 sing N N 222 CPS C12 H12A sing N N 223 CPS C13 H13 sing N N 224 CPS C14 H14 sing N N 225 CPS C14 H14A sing N N 226 CPS C15 H15 sing N N 227 CPS C16 H16 sing N N 228 CPS C16 H16A sing N N 229 CPS C17 H17 sing N N 230 CPS C18 H18 sing N N 231 CPS C19 H19 sing N N 232 CPS C20 H20 sing N N 233 CPS C21 H21 sing N N 234 CPS C21 H21A sing N N 235 CPS C21 H21B sing N N 236 CPS C22 H22 sing N N 237 CPS C22 H22A sing N N 238 CPS C23 H23 sing N N 239 CPS C23 H23A sing N N 240 CPS C25 H25 sing N N 241 CPS C25 H25A sing N N 242 CPS C26 H261 sing N N 243 CPS C27 H271 sing N N 244 CPS C28 H28 sing N N 245 CPS C28 H28A sing N N 246 CPS C28 H28B sing N N 247 CPS C29 H29 sing N N 248 CPS C29 H29A sing N N 249 CPS C29 H29B sing N N 250 CPS C30 H30 sing N N 251 CPS C30 H30A sing N N 252 CPS C31 H31 sing N N 253 CPS C31 H31A sing N N 254 CPS C32 H32 sing N N 255 CPS C32 H32A sing N N 256 CPS N1 HN1 sing N N 257 CPS O2 HO2 sing N N 258 CPS O3 HO3 sing N N 259 CPS O4 HO4 sing N N 260 CPS C26 H262 sing N N 261 CPS C27 H272 sing N N 262 D10 C1 C2 sing N N 263 D10 C1 H11 sing N N 264 D10 C1 H12 sing N N 265 D10 C1 H13 sing N N 266 D10 C2 C3 sing N N 267 D10 C2 H21 sing N N 268 D10 C2 H22 sing N N 269 D10 C3 C4 sing N N 270 D10 C3 H31 sing N N 271 D10 C3 H32 sing N N 272 D10 C4 C5 sing N N 273 D10 C4 H41 sing N N 274 D10 C4 H42 sing N N 275 D10 C5 C6 sing N N 276 D10 C5 H51 sing N N 277 D10 C5 H52 sing N N 278 D10 C6 C7 sing N N 279 D10 C6 H61 sing N N 280 D10 C6 H62 sing N N 281 D10 C7 C8 sing N N 282 D10 C7 H71 sing N N 283 D10 C7 H72 sing N N 284 D10 C8 C9 sing N N 285 D10 C8 H81 sing N N 286 D10 C8 H82 sing N N 287 D10 C9 C10 sing N N 288 D10 C9 H91 sing N N 289 D10 C9 H92 sing N N 290 D10 C10 H101 sing N N 291 D10 C10 H102 sing N N 292 D10 C10 H103 sing N N 293 D12 C1 C2 sing N N 294 D12 C1 H11 sing N N 295 D12 C1 H12 sing N N 296 D12 C1 H13 sing N N 297 D12 C2 C3 sing N N 298 D12 C2 H21 sing N N 299 D12 C2 H22 sing N N 300 D12 C3 C4 sing N N 301 D12 C3 H31 sing N N 302 D12 C3 H32 sing N N 303 D12 C4 C5 sing N N 304 D12 C4 H41 sing N N 305 D12 C4 H42 sing N N 306 D12 C5 C6 sing N N 307 D12 C5 H51 sing N N 308 D12 C5 H52 sing N N 309 D12 C6 C7 sing N N 310 D12 C6 H61 sing N N 311 D12 C6 H62 sing N N 312 D12 C7 C8 sing N N 313 D12 C7 H71 sing N N 314 D12 C7 H72 sing N N 315 D12 C8 C9 sing N N 316 D12 C8 H81 sing N N 317 D12 C8 H82 sing N N 318 D12 C9 C10 sing N N 319 D12 C9 H91 sing N N 320 D12 C9 H92 sing N N 321 D12 C10 C11 sing N N 322 D12 C10 H101 sing N N 323 D12 C10 H102 sing N N 324 D12 C11 C12 sing N N 325 D12 C11 H111 sing N N 326 D12 C11 H112 sing N N 327 D12 C12 H121 sing N N 328 D12 C12 H122 sing N N 329 D12 C12 H123 sing N N 330 DD9 C2 C1 sing N N 331 DD9 C1 H1 sing N N 332 DD9 C1 H1A sing N N 333 DD9 C1 H1B sing N N 334 DD9 C3 C2 sing N N 335 DD9 C2 H2 sing N N 336 DD9 C2 H2A sing N N 337 DD9 C4 C3 sing N N 338 DD9 C3 H3 sing N N 339 DD9 C3 H3A sing N N 340 DD9 C5 C4 sing N N 341 DD9 C4 H4 sing N N 342 DD9 C4 H4A sing N N 343 DD9 C6 C5 sing N N 344 DD9 C5 H5 sing N N 345 DD9 C5 H5A sing N N 346 DD9 C7 C6 sing N N 347 DD9 C6 H6 sing N N 348 DD9 C6 H6A sing N N 349 DD9 C8 C7 sing N N 350 DD9 C7 H7 sing N N 351 DD9 C7 H7A sing N N 352 DD9 C9 C8 sing N N 353 DD9 C8 H8 sing N N 354 DD9 C8 H8A sing N N 355 DD9 C9 H9 sing N N 356 DD9 C9 H9A sing N N 357 DD9 C9 H9B sing N N 358 GLN N CA sing N N 359 GLN N H sing N N 360 GLN N H2 sing N N 361 GLN CA C sing N N 362 GLN CA CB sing N N 363 GLN CA HA sing N N 364 GLN C O doub N N 365 GLN C OXT sing N N 366 GLN CB CG sing N N 367 GLN CB HB2 sing N N 368 GLN CB HB3 sing N N 369 GLN CG CD sing N N 370 GLN CG HG2 sing N N 371 GLN CG HG3 sing N N 372 GLN CD OE1 doub N N 373 GLN CD NE2 sing N N 374 GLN NE2 HE21 sing N N 375 GLN NE2 HE22 sing N N 376 GLN OXT HXT sing N N 377 GLU N CA sing N N 378 GLU N H sing N N 379 GLU N H2 sing N N 380 GLU CA C sing N N 381 GLU CA CB sing N N 382 GLU CA HA sing N N 383 GLU C O doub N N 384 GLU C OXT sing N N 385 GLU CB CG sing N N 386 GLU CB HB2 sing N N 387 GLU CB HB3 sing N N 388 GLU CG CD sing N N 389 GLU CG HG2 sing N N 390 GLU CG HG3 sing N N 391 GLU CD OE1 doub N N 392 GLU CD OE2 sing N N 393 GLU OE2 HE2 sing N N 394 GLU OXT HXT sing N N 395 GLY N CA sing N N 396 GLY N H sing N N 397 GLY N H2 sing N N 398 GLY CA C sing N N 399 GLY CA HA2 sing N N 400 GLY CA HA3 sing N N 401 GLY C O doub N N 402 GLY C OXT sing N N 403 GLY OXT HXT sing N N 404 HOH O H1 sing N N 405 HOH O H2 sing N N 406 HP6 C20 C21 sing N N 407 HP6 C20 H201 sing N N 408 HP6 C20 H202 sing N N 409 HP6 C20 H203 sing N N 410 HP6 C21 C22 sing N N 411 HP6 C21 H211 sing N N 412 HP6 C21 H212 sing N N 413 HP6 C22 C23 sing N N 414 HP6 C22 H221 sing N N 415 HP6 C22 H222 sing N N 416 HP6 C23 C24 sing N N 417 HP6 C23 H231 sing N N 418 HP6 C23 H232 sing N N 419 HP6 C24 C25 sing N N 420 HP6 C24 H241 sing N N 421 HP6 C24 H242 sing N N 422 HP6 C25 C26 sing N N 423 HP6 C25 H251 sing N N 424 HP6 C25 H252 sing N N 425 HP6 C26 H261 sing N N 426 HP6 C26 H262 sing N N 427 HP6 C26 H263 sing N N 428 ILE N CA sing N N 429 ILE N H sing N N 430 ILE N H2 sing N N 431 ILE CA C sing N N 432 ILE CA CB sing N N 433 ILE CA HA sing N N 434 ILE C O doub N N 435 ILE C OXT sing N N 436 ILE CB CG1 sing N N 437 ILE CB CG2 sing N N 438 ILE CB HB sing N N 439 ILE CG1 CD1 sing N N 440 ILE CG1 HG12 sing N N 441 ILE CG1 HG13 sing N N 442 ILE CG2 HG21 sing N N 443 ILE CG2 HG22 sing N N 444 ILE CG2 HG23 sing N N 445 ILE CD1 HD11 sing N N 446 ILE CD1 HD12 sing N N 447 ILE CD1 HD13 sing N N 448 ILE OXT HXT sing N N 449 LEU N CA sing N N 450 LEU N H sing N N 451 LEU N H2 sing N N 452 LEU CA C sing N N 453 LEU CA CB sing N N 454 LEU CA HA sing N N 455 LEU C O doub N N 456 LEU C OXT sing N N 457 LEU CB CG sing N N 458 LEU CB HB2 sing N N 459 LEU CB HB3 sing N N 460 LEU CG CD1 sing N N 461 LEU CG CD2 sing N N 462 LEU CG HG sing N N 463 LEU CD1 HD11 sing N N 464 LEU CD1 HD12 sing N N 465 LEU CD1 HD13 sing N N 466 LEU CD2 HD21 sing N N 467 LEU CD2 HD22 sing N N 468 LEU CD2 HD23 sing N N 469 LEU OXT HXT sing N N 470 LYS N CA sing N N 471 LYS N H sing N N 472 LYS N H2 sing N N 473 LYS CA C sing N N 474 LYS CA CB sing N N 475 LYS CA HA sing N N 476 LYS C O doub N N 477 LYS C OXT sing N N 478 LYS CB CG sing N N 479 LYS CB HB2 sing N N 480 LYS CB HB3 sing N N 481 LYS CG CD sing N N 482 LYS CG HG2 sing N N 483 LYS CG HG3 sing N N 484 LYS CD CE sing N N 485 LYS CD HD2 sing N N 486 LYS CD HD3 sing N N 487 LYS CE NZ sing N N 488 LYS CE HE2 sing N N 489 LYS CE HE3 sing N N 490 LYS NZ HZ1 sing N N 491 LYS NZ HZ2 sing N N 492 LYS NZ HZ3 sing N N 493 LYS OXT HXT sing N N 494 MET N CA sing N N 495 MET N H sing N N 496 MET N H2 sing N N 497 MET CA C sing N N 498 MET CA CB sing N N 499 MET CA HA sing N N 500 MET C O doub N N 501 MET C OXT sing N N 502 MET CB CG sing N N 503 MET CB HB2 sing N N 504 MET CB HB3 sing N N 505 MET CG SD sing N N 506 MET CG HG2 sing N N 507 MET CG HG3 sing N N 508 MET SD CE sing N N 509 MET CE HE1 sing N N 510 MET CE HE2 sing N N 511 MET CE HE3 sing N N 512 MET OXT HXT sing N N 513 OCT C1 C2 sing N N 514 OCT C1 H11 sing N N 515 OCT C1 H12 sing N N 516 OCT C1 H13 sing N N 517 OCT C2 C3 sing N N 518 OCT C2 H21 sing N N 519 OCT C2 H22 sing N N 520 OCT C3 C4 sing N N 521 OCT C3 H31 sing N N 522 OCT C3 H32 sing N N 523 OCT C4 C5 sing N N 524 OCT C4 H41 sing N N 525 OCT C4 H42 sing N N 526 OCT C5 C6 sing N N 527 OCT C5 H51 sing N N 528 OCT C5 H52 sing N N 529 OCT C6 C7 sing N N 530 OCT C6 H61 sing N N 531 OCT C6 H62 sing N N 532 OCT C7 C8 sing N N 533 OCT C7 H71 sing N N 534 OCT C7 H72 sing N N 535 OCT C8 H81 sing N N 536 OCT C8 H82 sing N N 537 OCT C8 H83 sing N N 538 PHE N CA sing N N 539 PHE N H sing N N 540 PHE N H2 sing N N 541 PHE CA C sing N N 542 PHE CA CB sing N N 543 PHE CA HA sing N N 544 PHE C O doub N N 545 PHE C OXT sing N N 546 PHE CB CG sing N N 547 PHE CB HB2 sing N N 548 PHE CB HB3 sing N N 549 PHE CG CD1 doub Y N 550 PHE CG CD2 sing Y N 551 PHE CD1 CE1 sing Y N 552 PHE CD1 HD1 sing N N 553 PHE CD2 CE2 doub Y N 554 PHE CD2 HD2 sing N N 555 PHE CE1 CZ doub Y N 556 PHE CE1 HE1 sing N N 557 PHE CE2 CZ sing Y N 558 PHE CE2 HE2 sing N N 559 PHE CZ HZ sing N N 560 PHE OXT HXT sing N N 561 PRO N CA sing N N 562 PRO N CD sing N N 563 PRO N H sing N N 564 PRO CA C sing N N 565 PRO CA CB sing N N 566 PRO CA HA sing N N 567 PRO C O doub N N 568 PRO C OXT sing N N 569 PRO CB CG sing N N 570 PRO CB HB2 sing N N 571 PRO CB HB3 sing N N 572 PRO CG CD sing N N 573 PRO CG HG2 sing N N 574 PRO CG HG3 sing N N 575 PRO CD HD2 sing N N 576 PRO CD HD3 sing N N 577 PRO OXT HXT sing N N 578 R16 C27 C28 sing N N 579 R16 C27 H271 sing N N 580 R16 C27 H272 sing N N 581 R16 C27 H273 sing N N 582 R16 C28 C29 sing N N 583 R16 C28 H281 sing N N 584 R16 C28 H282 sing N N 585 R16 C29 C30 sing N N 586 R16 C29 H291 sing N N 587 R16 C29 H292 sing N N 588 R16 C30 C31 sing N N 589 R16 C30 H301 sing N N 590 R16 C30 H302 sing N N 591 R16 C31 C32 sing N N 592 R16 C31 H311 sing N N 593 R16 C31 H312 sing N N 594 R16 C32 C33 sing N N 595 R16 C32 H321 sing N N 596 R16 C32 H322 sing N N 597 R16 C33 C34 sing N N 598 R16 C33 H331 sing N N 599 R16 C33 H332 sing N N 600 R16 C34 C35 sing N N 601 R16 C34 H341 sing N N 602 R16 C34 H342 sing N N 603 R16 C35 C36 sing N N 604 R16 C35 H351 sing N N 605 R16 C35 H352 sing N N 606 R16 C36 C37 sing N N 607 R16 C36 H361 sing N N 608 R16 C36 H362 sing N N 609 R16 C37 C38 sing N N 610 R16 C37 H371 sing N N 611 R16 C37 H372 sing N N 612 R16 C38 C39 sing N N 613 R16 C38 H381 sing N N 614 R16 C38 H382 sing N N 615 R16 C39 C40 sing N N 616 R16 C39 H391 sing N N 617 R16 C39 H392 sing N N 618 R16 C40 C41 sing N N 619 R16 C40 H401 sing N N 620 R16 C40 H402 sing N N 621 R16 C41 C42 sing N N 622 R16 C41 H411 sing N N 623 R16 C41 H412 sing N N 624 R16 C42 H421 sing N N 625 R16 C42 H422 sing N N 626 R16 C42 H423 sing N N 627 RET C1 C2 sing N N 628 RET C1 C6 sing N N 629 RET C1 C16 sing N N 630 RET C1 C17 sing N N 631 RET C2 C3 sing N N 632 RET C2 H21 sing N N 633 RET C2 H22 sing N N 634 RET C3 C4 sing N N 635 RET C3 H31 sing N N 636 RET C3 H32 sing N N 637 RET C4 C5 sing N N 638 RET C4 H41 sing N N 639 RET C4 H42 sing N N 640 RET C5 C6 doub N N 641 RET C5 C18 sing N N 642 RET C6 C7 sing N N 643 RET C7 C8 doub N E 644 RET C7 H7 sing N N 645 RET C8 C9 sing N N 646 RET C8 H8 sing N N 647 RET C9 C10 doub N E 648 RET C9 C19 sing N N 649 RET C10 C11 sing N N 650 RET C10 H10 sing N N 651 RET C11 C12 doub N E 652 RET C11 H11 sing N N 653 RET C12 C13 sing N N 654 RET C12 H12 sing N N 655 RET C13 C14 doub N E 656 RET C13 C20 sing N N 657 RET C14 C15 sing N N 658 RET C14 H14 sing N N 659 RET C15 O1 doub N N 660 RET C15 H15 sing N N 661 RET C16 H161 sing N N 662 RET C16 H162 sing N N 663 RET C16 H163 sing N N 664 RET C17 H171 sing N N 665 RET C17 H172 sing N N 666 RET C17 H173 sing N N 667 RET C18 H181 sing N N 668 RET C18 H182 sing N N 669 RET C18 H183 sing N N 670 RET C19 H191 sing N N 671 RET C19 H192 sing N N 672 RET C19 H193 sing N N 673 RET C20 H201 sing N N 674 RET C20 H202 sing N N 675 RET C20 H203 sing N N 676 SER N CA sing N N 677 SER N H sing N N 678 SER N H2 sing N N 679 SER CA C sing N N 680 SER CA CB sing N N 681 SER CA HA sing N N 682 SER C O doub N N 683 SER C OXT sing N N 684 SER CB OG sing N N 685 SER CB HB2 sing N N 686 SER CB HB3 sing N N 687 SER OG HG sing N N 688 SER OXT HXT sing N N 689 THR N CA sing N N 690 THR N H sing N N 691 THR N H2 sing N N 692 THR CA C sing N N 693 THR CA CB sing N N 694 THR CA HA sing N N 695 THR C O doub N N 696 THR C OXT sing N N 697 THR CB OG1 sing N N 698 THR CB CG2 sing N N 699 THR CB HB sing N N 700 THR OG1 HG1 sing N N 701 THR CG2 HG21 sing N N 702 THR CG2 HG22 sing N N 703 THR CG2 HG23 sing N N 704 THR OXT HXT sing N N 705 TRP N CA sing N N 706 TRP N H sing N N 707 TRP N H2 sing N N 708 TRP CA C sing N N 709 TRP CA CB sing N N 710 TRP CA HA sing N N 711 TRP C O doub N N 712 TRP C OXT sing N N 713 TRP CB CG sing N N 714 TRP CB HB2 sing N N 715 TRP CB HB3 sing N N 716 TRP CG CD1 doub Y N 717 TRP CG CD2 sing Y N 718 TRP CD1 NE1 sing Y N 719 TRP CD1 HD1 sing N N 720 TRP CD2 CE2 doub Y N 721 TRP CD2 CE3 sing Y N 722 TRP NE1 CE2 sing Y N 723 TRP NE1 HE1 sing N N 724 TRP CE2 CZ2 sing Y N 725 TRP CE3 CZ3 doub Y N 726 TRP CE3 HE3 sing N N 727 TRP CZ2 CH2 doub Y N 728 TRP CZ2 HZ2 sing N N 729 TRP CZ3 CH2 sing Y N 730 TRP CZ3 HZ3 sing N N 731 TRP CH2 HH2 sing N N 732 TRP OXT HXT sing N N 733 TYR N CA sing N N 734 TYR N H sing N N 735 TYR N H2 sing N N 736 TYR CA C sing N N 737 TYR CA CB sing N N 738 TYR CA HA sing N N 739 TYR C O doub N N 740 TYR C OXT sing N N 741 TYR CB CG sing N N 742 TYR CB HB2 sing N N 743 TYR CB HB3 sing N N 744 TYR CG CD1 doub Y N 745 TYR CG CD2 sing Y N 746 TYR CD1 CE1 sing Y N 747 TYR CD1 HD1 sing N N 748 TYR CD2 CE2 doub Y N 749 TYR CD2 HD2 sing N N 750 TYR CE1 CZ doub Y N 751 TYR CE1 HE1 sing N N 752 TYR CE2 CZ sing Y N 753 TYR CE2 HE2 sing N N 754 TYR CZ OH sing N N 755 TYR OH HH sing N N 756 TYR OXT HXT sing N N 757 VAL N CA sing N N 758 VAL N H sing N N 759 VAL N H2 sing N N 760 VAL CA C sing N N 761 VAL CA CB sing N N 762 VAL CA HA sing N N 763 VAL C O doub N N 764 VAL C OXT sing N N 765 VAL CB CG1 sing N N 766 VAL CB CG2 sing N N 767 VAL CB HB sing N N 768 VAL CG1 HG11 sing N N 769 VAL CG1 HG12 sing N N 770 VAL CG1 HG13 sing N N 771 VAL CG2 HG21 sing N N 772 VAL CG2 HG22 sing N N 773 VAL CG2 HG23 sing N N 774 VAL OXT HXT sing N N 775 # _pdbx_audit_support.funding_organization 'Japan Science and Technology' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number JPMJPR17GB _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 CPS ? ? CPS ? ? 'SUBJECT OF INVESTIGATION' ? 2 D10 ? ? D10 ? ? 'SUBJECT OF INVESTIGATION' ? 3 D12 ? ? D12 ? ? 'SUBJECT OF INVESTIGATION' ? 4 DD9 ? ? DD9 ? ? 'SUBJECT OF INVESTIGATION' ? 5 HP6 ? ? HP6 ? ? 'SUBJECT OF INVESTIGATION' ? 6 IOD ? ? IOD ? ? 'SUBJECT OF INVESTIGATION' ? 7 OCT ? ? OCT ? ? 'SUBJECT OF INVESTIGATION' ? 8 R16 ? ? R16 ? ? 'SUBJECT OF INVESTIGATION' ? 9 RET ? ? RET ? ? 'SUBJECT OF INVESTIGATION' ? 10 7YH ? ? 7YH ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 RETINAL RET 3 '2-[[(2R)-2-(3-bromanyl-5-iodanyl-phenyl)carbonyloxy-3-tetradecanoyloxy-propoxy]-oxidanyl-phosphoryl]oxyethyl-trimethyl-azanium' 7YH 4 'IODIDE ION' IOD 5 '3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE' CPS 6 N-OCTANE OCT 7 HEPTANE HP6 8 DODECANE D12 9 HEXADECANE R16 10 DECANE D10 11 nonane DD9 12 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5B35 _pdbx_initial_refinement_model.details ? # _pdbx_related_exp_data_set.ordinal 1 _pdbx_related_exp_data_set.data_set_type 'diffraction image data' _pdbx_related_exp_data_set.data_reference 10.11577/1834012 _pdbx_related_exp_data_set.metadata_reference ? _pdbx_related_exp_data_set.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #