data_7YR0 # _entry.id 7YR0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.361 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7YR0 pdb_00007yr0 10.2210/pdb7yr0/pdb WWPDB D_1300031465 ? ? EMDB EMD-34041 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'SARS-CoV-2 BA.2.75 S Trimer in complex with S309 (interface)' _pdbx_database_related.db_id EMD-34041 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7YR0 _pdbx_database_status.recvd_initial_deposition_date 2022-08-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Wang, L.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cell Host Microbe' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1934-6069 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 30 _citation.language ? _citation.page_first 1527 _citation.page_last ? _citation.title 'Characterization of the enhanced infectivity and antibody evasion of Omicron BA.2.75.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.chom.2022.09.018 _citation.pdbx_database_id_PubMed 36270286 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cao, Y.' 1 ? primary 'Song, W.' 2 ? primary 'Wang, L.' 3 ? primary 'Liu, P.' 4 ? primary 'Yue, C.' 5 ? primary 'Jian, F.' 6 ? primary 'Yu, Y.' 7 ? primary 'Yisimayi, A.' 8 ? primary 'Wang, P.' 9 ? primary 'Wang, Y.' 10 ? primary 'Zhu, Q.' 11 ? primary 'Deng, J.' 12 ? primary 'Fu, W.' 13 ? primary 'Yu, L.' 14 ? primary 'Zhang, N.' 15 ? primary 'Wang, J.' 16 ? primary 'Xiao, T.' 17 ? primary 'An, R.' 18 ? primary 'Wang, J.' 19 ? primary 'Liu, L.' 20 ? primary 'Yang, S.' 21 ? primary 'Niu, X.' 22 ? primary 'Gu, Q.' 23 ? primary 'Shao, F.' 24 ? primary 'Hao, X.' 25 ? primary 'Meng, B.' 26 ? primary 'Gupta, R.K.' 27 ? primary 'Jin, R.' 28 ? primary 'Wang, Y.' 29 ? primary 'Xie, X.S.' 30 ? primary 'Wang, X.' 31 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7YR0 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 7YR0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Spike protein S1' 22192.127 1 ? ? ? ? 2 polymer man 'Heavy chain of S309' 13918.448 1 ? ? ? ? 3 polymer man 'IGK@ protein' 23204.697 1 ? ? ? ? 4 branched man ;beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 732.682 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;ITNLCPFHEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIA PGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSKLKPFERDISTEIYQAGNKPCNGVAGFNCYFP LQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGP ; ;ITNLCPFHEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIA PGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSKLKPFERDISTEIYQAGNKPCNGVAGFNCYFP LQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGP ; A ? 2 'polypeptide(L)' no no ;QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGY MELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVS ; ;QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGY MELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVS ; C ? 3 'polypeptide(L)' no no ;EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLE PEDFAVYYCQQHDTSLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQ ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC ; ;EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLE PEDFAVYYCQQHDTSLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQ ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 THR n 1 3 ASN n 1 4 LEU n 1 5 CYS n 1 6 PRO n 1 7 PHE n 1 8 HIS n 1 9 GLU n 1 10 VAL n 1 11 PHE n 1 12 ASN n 1 13 ALA n 1 14 THR n 1 15 ARG n 1 16 PHE n 1 17 ALA n 1 18 SER n 1 19 VAL n 1 20 TYR n 1 21 ALA n 1 22 TRP n 1 23 ASN n 1 24 ARG n 1 25 LYS n 1 26 ARG n 1 27 ILE n 1 28 SER n 1 29 ASN n 1 30 CYS n 1 31 VAL n 1 32 ALA n 1 33 ASP n 1 34 TYR n 1 35 SER n 1 36 VAL n 1 37 LEU n 1 38 TYR n 1 39 ASN n 1 40 PHE n 1 41 ALA n 1 42 PRO n 1 43 PHE n 1 44 PHE n 1 45 ALA n 1 46 PHE n 1 47 LYS n 1 48 CYS n 1 49 TYR n 1 50 GLY n 1 51 VAL n 1 52 SER n 1 53 PRO n 1 54 THR n 1 55 LYS n 1 56 LEU n 1 57 ASN n 1 58 ASP n 1 59 LEU n 1 60 CYS n 1 61 PHE n 1 62 THR n 1 63 ASN n 1 64 VAL n 1 65 TYR n 1 66 ALA n 1 67 ASP n 1 68 SER n 1 69 PHE n 1 70 VAL n 1 71 ILE n 1 72 ARG n 1 73 GLY n 1 74 ASN n 1 75 GLU n 1 76 VAL n 1 77 SER n 1 78 GLN n 1 79 ILE n 1 80 ALA n 1 81 PRO n 1 82 GLY n 1 83 GLN n 1 84 THR n 1 85 GLY n 1 86 ASN n 1 87 ILE n 1 88 ALA n 1 89 ASP n 1 90 TYR n 1 91 ASN n 1 92 TYR n 1 93 LYS n 1 94 LEU n 1 95 PRO n 1 96 ASP n 1 97 ASP n 1 98 PHE n 1 99 THR n 1 100 GLY n 1 101 CYS n 1 102 VAL n 1 103 ILE n 1 104 ALA n 1 105 TRP n 1 106 ASN n 1 107 SER n 1 108 ASN n 1 109 LYS n 1 110 LEU n 1 111 ASP n 1 112 SER n 1 113 LYS n 1 114 VAL n 1 115 SER n 1 116 GLY n 1 117 ASN n 1 118 TYR n 1 119 ASN n 1 120 TYR n 1 121 LEU n 1 122 TYR n 1 123 ARG n 1 124 LEU n 1 125 PHE n 1 126 ARG n 1 127 LYS n 1 128 SER n 1 129 LYS n 1 130 LEU n 1 131 LYS n 1 132 PRO n 1 133 PHE n 1 134 GLU n 1 135 ARG n 1 136 ASP n 1 137 ILE n 1 138 SER n 1 139 THR n 1 140 GLU n 1 141 ILE n 1 142 TYR n 1 143 GLN n 1 144 ALA n 1 145 GLY n 1 146 ASN n 1 147 LYS n 1 148 PRO n 1 149 CYS n 1 150 ASN n 1 151 GLY n 1 152 VAL n 1 153 ALA n 1 154 GLY n 1 155 PHE n 1 156 ASN n 1 157 CYS n 1 158 TYR n 1 159 PHE n 1 160 PRO n 1 161 LEU n 1 162 GLN n 1 163 SER n 1 164 TYR n 1 165 GLY n 1 166 PHE n 1 167 ARG n 1 168 PRO n 1 169 THR n 1 170 TYR n 1 171 GLY n 1 172 VAL n 1 173 GLY n 1 174 HIS n 1 175 GLN n 1 176 PRO n 1 177 TYR n 1 178 ARG n 1 179 VAL n 1 180 VAL n 1 181 VAL n 1 182 LEU n 1 183 SER n 1 184 PHE n 1 185 GLU n 1 186 LEU n 1 187 LEU n 1 188 HIS n 1 189 ALA n 1 190 PRO n 1 191 ALA n 1 192 THR n 1 193 VAL n 1 194 CYS n 1 195 GLY n 1 196 PRO n 2 1 GLN n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 VAL n 2 6 GLN n 2 7 SER n 2 8 GLY n 2 9 ALA n 2 10 GLU n 2 11 VAL n 2 12 LYS n 2 13 LYS n 2 14 PRO n 2 15 GLY n 2 16 ALA n 2 17 SER n 2 18 VAL n 2 19 LYS n 2 20 VAL n 2 21 SER n 2 22 CYS n 2 23 LYS n 2 24 ALA n 2 25 SER n 2 26 GLY n 2 27 TYR n 2 28 PRO n 2 29 PHE n 2 30 THR n 2 31 SER n 2 32 TYR n 2 33 GLY n 2 34 ILE n 2 35 SER n 2 36 TRP n 2 37 VAL n 2 38 ARG n 2 39 GLN n 2 40 ALA n 2 41 PRO n 2 42 GLY n 2 43 GLN n 2 44 GLY n 2 45 LEU n 2 46 GLU n 2 47 TRP n 2 48 MET n 2 49 GLY n 2 50 TRP n 2 51 ILE n 2 52 SER n 2 53 THR n 2 54 TYR n 2 55 ASN n 2 56 GLY n 2 57 ASN n 2 58 THR n 2 59 ASN n 2 60 TYR n 2 61 ALA n 2 62 GLN n 2 63 LYS n 2 64 PHE n 2 65 GLN n 2 66 GLY n 2 67 ARG n 2 68 VAL n 2 69 THR n 2 70 MET n 2 71 THR n 2 72 THR n 2 73 ASP n 2 74 THR n 2 75 SER n 2 76 THR n 2 77 THR n 2 78 THR n 2 79 GLY n 2 80 TYR n 2 81 MET n 2 82 GLU n 2 83 LEU n 2 84 ARG n 2 85 ARG n 2 86 LEU n 2 87 ARG n 2 88 SER n 2 89 ASP n 2 90 ASP n 2 91 THR n 2 92 ALA n 2 93 VAL n 2 94 TYR n 2 95 TYR n 2 96 CYS n 2 97 ALA n 2 98 ARG n 2 99 ASP n 2 100 TYR n 2 101 THR n 2 102 ARG n 2 103 GLY n 2 104 ALA n 2 105 TRP n 2 106 PHE n 2 107 GLY n 2 108 GLU n 2 109 SER n 2 110 LEU n 2 111 ILE n 2 112 GLY n 2 113 GLY n 2 114 PHE n 2 115 ASP n 2 116 ASN n 2 117 TRP n 2 118 GLY n 2 119 GLN n 2 120 GLY n 2 121 THR n 2 122 LEU n 2 123 VAL n 2 124 THR n 2 125 VAL n 2 126 SER n 3 1 GLU n 3 2 ILE n 3 3 VAL n 3 4 LEU n 3 5 THR n 3 6 GLN n 3 7 SER n 3 8 PRO n 3 9 GLY n 3 10 THR n 3 11 LEU n 3 12 SER n 3 13 LEU n 3 14 SER n 3 15 PRO n 3 16 GLY n 3 17 GLU n 3 18 ARG n 3 19 ALA n 3 20 THR n 3 21 LEU n 3 22 SER n 3 23 CYS n 3 24 ARG n 3 25 ALA n 3 26 SER n 3 27 GLN n 3 28 THR n 3 29 VAL n 3 30 SER n 3 31 SER n 3 32 THR n 3 33 SER n 3 34 LEU n 3 35 ALA n 3 36 TRP n 3 37 TYR n 3 38 GLN n 3 39 GLN n 3 40 LYS n 3 41 PRO n 3 42 GLY n 3 43 GLN n 3 44 ALA n 3 45 PRO n 3 46 ARG n 3 47 LEU n 3 48 LEU n 3 49 ILE n 3 50 TYR n 3 51 GLY n 3 52 ALA n 3 53 SER n 3 54 SER n 3 55 ARG n 3 56 ALA n 3 57 THR n 3 58 GLY n 3 59 ILE n 3 60 PRO n 3 61 ASP n 3 62 ARG n 3 63 PHE n 3 64 SER n 3 65 GLY n 3 66 SER n 3 67 GLY n 3 68 SER n 3 69 GLY n 3 70 THR n 3 71 ASP n 3 72 PHE n 3 73 THR n 3 74 LEU n 3 75 THR n 3 76 ILE n 3 77 SER n 3 78 ARG n 3 79 LEU n 3 80 GLU n 3 81 PRO n 3 82 GLU n 3 83 ASP n 3 84 PHE n 3 85 ALA n 3 86 VAL n 3 87 TYR n 3 88 TYR n 3 89 CYS n 3 90 GLN n 3 91 GLN n 3 92 HIS n 3 93 ASP n 3 94 THR n 3 95 SER n 3 96 LEU n 3 97 THR n 3 98 PHE n 3 99 GLY n 3 100 GLY n 3 101 GLY n 3 102 THR n 3 103 LYS n 3 104 VAL n 3 105 GLU n 3 106 ILE n 3 107 LYS n 3 108 ARG n 3 109 THR n 3 110 VAL n 3 111 ALA n 3 112 ALA n 3 113 PRO n 3 114 SER n 3 115 VAL n 3 116 PHE n 3 117 ILE n 3 118 PHE n 3 119 PRO n 3 120 PRO n 3 121 SER n 3 122 ASP n 3 123 GLU n 3 124 GLN n 3 125 LEU n 3 126 LYS n 3 127 SER n 3 128 GLY n 3 129 THR n 3 130 ALA n 3 131 SER n 3 132 VAL n 3 133 VAL n 3 134 CYS n 3 135 LEU n 3 136 LEU n 3 137 ASN n 3 138 ASN n 3 139 PHE n 3 140 TYR n 3 141 PRO n 3 142 ARG n 3 143 GLU n 3 144 ALA n 3 145 LYS n 3 146 VAL n 3 147 GLN n 3 148 TRP n 3 149 LYS n 3 150 VAL n 3 151 ASP n 3 152 ASN n 3 153 ALA n 3 154 LEU n 3 155 GLN n 3 156 SER n 3 157 GLY n 3 158 ASN n 3 159 SER n 3 160 GLN n 3 161 GLU n 3 162 SER n 3 163 VAL n 3 164 THR n 3 165 GLU n 3 166 GLN n 3 167 ASP n 3 168 SER n 3 169 LYS n 3 170 ASP n 3 171 SER n 3 172 THR n 3 173 TYR n 3 174 SER n 3 175 LEU n 3 176 SER n 3 177 SER n 3 178 THR n 3 179 LEU n 3 180 THR n 3 181 LEU n 3 182 SER n 3 183 LYS n 3 184 ALA n 3 185 ASP n 3 186 TYR n 3 187 GLU n 3 188 LYS n 3 189 HIS n 3 190 LYS n 3 191 VAL n 3 192 TYR n 3 193 ALA n 3 194 CYS n 3 195 GLU n 3 196 VAL n 3 197 THR n 3 198 HIS n 3 199 GLN n 3 200 GLY n 3 201 LEU n 3 202 SER n 3 203 SER n 3 204 PRO n 3 205 VAL n 3 206 THR n 3 207 LYS n 3 208 SER n 3 209 PHE n 3 210 ASN n 3 211 ARG n 3 212 GLY n 3 213 GLU n 3 214 CYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 196 ? ? 'S, 2' ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293 ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 126 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293 ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 214 human ? IGK@ ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293 ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SPIKE_SARS2 P0DTC2 ? 1 ;ITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIA PGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFP LQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP ; 332 2 PDB 7YR0 7YR0 ? 2 ? 1 3 PDB 7YR0 7YR0 ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7YR0 A 1 ? 196 ? P0DTC2 332 ? 527 ? 332 527 2 2 7YR0 C 1 ? 126 ? 7YR0 1 ? 126 ? 1 126 3 3 7YR0 B 1 ? 214 ? 7YR0 1 ? 214 ? 1 214 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7YR0 HIS A 8 ? UNP P0DTC2 GLY 339 variant 339 1 1 7YR0 PHE A 40 ? UNP P0DTC2 SER 371 variant 371 2 1 7YR0 PRO A 42 ? UNP P0DTC2 SER 373 variant 373 3 1 7YR0 PHE A 44 ? UNP P0DTC2 SER 375 variant 375 4 1 7YR0 ALA A 45 ? UNP P0DTC2 THR 376 variant 376 5 1 7YR0 ASN A 74 ? UNP P0DTC2 ASP 405 variant 405 6 1 7YR0 SER A 77 ? UNP P0DTC2 ARG 408 variant 408 7 1 7YR0 ASN A 86 ? UNP P0DTC2 LYS 417 variant 417 8 1 7YR0 LYS A 109 ? UNP P0DTC2 ASN 440 variant 440 9 1 7YR0 SER A 115 ? UNP P0DTC2 GLY 446 variant 446 10 1 7YR0 LYS A 129 ? UNP P0DTC2 ASN 460 variant 460 11 1 7YR0 ASN A 146 ? UNP P0DTC2 SER 477 variant 477 12 1 7YR0 LYS A 147 ? UNP P0DTC2 THR 478 variant 478 13 1 7YR0 ALA A 153 ? UNP P0DTC2 GLU 484 variant 484 14 1 7YR0 ARG A 167 ? UNP P0DTC2 GLN 498 variant 498 15 1 7YR0 TYR A 170 ? UNP P0DTC2 ASN 501 variant 501 16 1 7YR0 HIS A 174 ? UNP P0DTC2 TYR 505 variant 505 17 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7YR0 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 7YR0 _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.003 ? 3474 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.601 ? 4723 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 4.722 ? 505 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.046 ? 516 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.004 ? 605 ? f_plane_restr ? ? # _struct.entry_id 7YR0 _struct.title 'SARS-CoV-2 BA.2.75 S Trimer in complex with S309 (interface)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7YR0 _struct_keywords.text 'spike, VIRALPROTEIN, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 6 ? PHE A 11 ? PRO A 337 PHE A 342 1 ? 6 HELX_P HELX_P2 AA2 TYR A 34 ? ASN A 39 ? TYR A 365 ASN A 370 1 ? 6 HELX_P HELX_P3 AA3 SER A 52 ? LEU A 56 ? SER A 383 LEU A 387 5 ? 5 HELX_P HELX_P4 AA4 GLU A 75 ? ILE A 79 ? GLU A 406 ILE A 410 5 ? 5 HELX_P HELX_P5 AA5 ALA B 61 ? GLN B 65 ? ALA C 61 GLN C 65 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 5 SG ? ? ? 1_555 A CYS 30 SG ? ? A CYS 336 A CYS 361 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf2 disulf ? ? A CYS 60 SG ? ? ? 1_555 A CYS 194 SG ? ? A CYS 391 A CYS 525 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf3 disulf ? ? A CYS 149 SG ? ? ? 1_555 A CYS 157 SG ? ? A CYS 480 A CYS 488 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf4 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG ? ? C CYS 22 C CYS 96 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf5 disulf ? ? C CYS 23 SG ? ? ? 1_555 C CYS 89 SG ? ? B CYS 23 B CYS 89 1_555 ? ? ? ? ? ? ? 2.034 ? ? covale1 covale one ? A ASN 12 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 343 D NAG 1 1_555 ? ? ? ? ? ? ? 1.466 ? N-Glycosylation covale2 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? D NAG 1 D NAG 2 1_555 ? ? ? ? ? ? ? 1.444 ? ? covale3 covale both ? D NAG . O6 ? ? ? 1_555 D FUC . C1 ? ? D NAG 1 D FUC 4 1_555 ? ? ? ? ? ? ? 1.442 ? ? covale4 covale both ? D NAG . O4 ? ? ? 1_555 D BMA . C1 ? ? D NAG 2 D BMA 3 1_555 ? ? ? ? ? ? ? 1.443 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? AA3 ? 4 ? AA4 ? 4 ? AA5 ? 4 ? AA6 ? 2 ? AA7 ? 3 ? AA8 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASN A 23 ? ILE A 27 ? ASN A 354 ILE A 358 AA1 2 VAL A 64 ? ILE A 71 ? VAL A 395 ILE A 402 AA1 3 TYR A 177 ? SER A 183 ? TYR A 508 SER A 514 AA1 4 GLY A 100 ? ASN A 106 ? GLY A 431 ASN A 437 AA2 1 LEU A 121 ? ARG A 123 ? LEU A 452 ARG A 454 AA2 2 LEU A 161 ? SER A 163 ? LEU A 492 SER A 494 AA3 1 GLN B 3 ? GLN B 6 ? GLN C 3 GLN C 6 AA3 2 VAL B 18 ? SER B 25 ? VAL C 18 SER C 25 AA3 3 THR B 78 ? LEU B 83 ? THR C 78 LEU C 83 AA3 4 MET B 70 ? ASP B 73 ? MET C 70 ASP C 73 AA4 1 GLY B 49 ? ILE B 51 ? GLY C 49 ILE C 51 AA4 2 GLY B 33 ? GLN B 39 ? GLY C 33 GLN C 39 AA4 3 VAL B 93 ? ASP B 99 ? VAL C 93 ASP C 99 AA4 4 PHE B 114 ? TRP B 117 ? PHE C 114 TRP C 117 AA5 1 GLY B 49 ? ILE B 51 ? GLY C 49 ILE C 51 AA5 2 GLY B 33 ? GLN B 39 ? GLY C 33 GLN C 39 AA5 3 VAL B 93 ? ASP B 99 ? VAL C 93 ASP C 99 AA5 4 THR B 121 ? LEU B 122 ? THR C 121 LEU C 122 AA6 1 THR C 10 ? LEU C 11 ? THR B 10 LEU B 11 AA6 2 LYS C 103 ? VAL C 104 ? LYS B 103 VAL B 104 AA7 1 ALA C 19 ? SER C 22 ? ALA B 19 SER B 22 AA7 2 ASP C 71 ? ILE C 76 ? ASP B 71 ILE B 76 AA7 3 SER C 64 ? SER C 68 ? SER B 64 SER B 68 AA8 1 ARG C 46 ? LEU C 47 ? ARG B 46 LEU B 47 AA8 2 LEU C 34 ? GLN C 39 ? LEU B 34 GLN B 39 AA8 3 VAL C 86 ? GLN C 91 ? VAL B 86 GLN B 91 AA8 4 THR C 97 ? PHE C 98 ? THR B 97 PHE B 98 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 25 ? N LYS A 356 O ALA A 66 ? O ALA A 397 AA1 2 3 N ASP A 67 ? N ASP A 398 O VAL A 181 ? O VAL A 512 AA1 3 4 O LEU A 182 ? O LEU A 513 N CYS A 101 ? N CYS A 432 AA2 1 2 N TYR A 122 ? N TYR A 453 O GLN A 162 ? O GLN A 493 AA3 1 2 N GLN B 3 ? N GLN C 3 O SER B 25 ? O SER C 25 AA3 2 3 N VAL B 20 ? N VAL C 20 O MET B 81 ? O MET C 81 AA3 3 4 O TYR B 80 ? O TYR C 80 N THR B 71 ? N THR C 71 AA4 1 2 O ILE B 51 ? O ILE C 51 N ILE B 34 ? N ILE C 34 AA4 2 3 N VAL B 37 ? N VAL C 37 O TYR B 95 ? O TYR C 95 AA4 3 4 N ARG B 98 ? N ARG C 98 O ASN B 116 ? O ASN C 116 AA5 1 2 O ILE B 51 ? O ILE C 51 N ILE B 34 ? N ILE C 34 AA5 2 3 N VAL B 37 ? N VAL C 37 O TYR B 95 ? O TYR C 95 AA5 3 4 N TYR B 94 ? N TYR C 94 O THR B 121 ? O THR C 121 AA6 1 2 N LEU C 11 ? N LEU B 11 O LYS C 103 ? O LYS B 103 AA7 1 2 N ALA C 19 ? N ALA B 19 O ILE C 76 ? O ILE B 76 AA7 2 3 O THR C 73 ? O THR B 73 N SER C 66 ? N SER B 66 AA8 1 2 O ARG C 46 ? O ARG B 46 N GLN C 38 ? N GLN B 38 AA8 2 3 N GLN C 39 ? N GLN B 39 O VAL C 86 ? O VAL B 86 AA8 3 4 N GLN C 91 ? N GLN B 91 O THR C 97 ? O THR B 97 # _atom_sites.entry_id 7YR0 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 332 332 ILE ILE A . n A 1 2 THR 2 333 333 THR THR A . n A 1 3 ASN 3 334 334 ASN ASN A . n A 1 4 LEU 4 335 335 LEU LEU A . n A 1 5 CYS 5 336 336 CYS CYS A . n A 1 6 PRO 6 337 337 PRO PRO A . n A 1 7 PHE 7 338 338 PHE PHE A . n A 1 8 HIS 8 339 339 HIS HIS A . n A 1 9 GLU 9 340 340 GLU GLU A . n A 1 10 VAL 10 341 341 VAL VAL A . n A 1 11 PHE 11 342 342 PHE PHE A . n A 1 12 ASN 12 343 343 ASN ASN A . n A 1 13 ALA 13 344 344 ALA ALA A . n A 1 14 THR 14 345 345 THR THR A . n A 1 15 ARG 15 346 346 ARG ARG A . n A 1 16 PHE 16 347 347 PHE PHE A . n A 1 17 ALA 17 348 348 ALA ALA A . n A 1 18 SER 18 349 349 SER SER A . n A 1 19 VAL 19 350 350 VAL VAL A . n A 1 20 TYR 20 351 351 TYR TYR A . n A 1 21 ALA 21 352 352 ALA ALA A . n A 1 22 TRP 22 353 353 TRP TRP A . n A 1 23 ASN 23 354 354 ASN ASN A . n A 1 24 ARG 24 355 355 ARG ARG A . n A 1 25 LYS 25 356 356 LYS LYS A . n A 1 26 ARG 26 357 357 ARG ARG A . n A 1 27 ILE 27 358 358 ILE ILE A . n A 1 28 SER 28 359 359 SER SER A . n A 1 29 ASN 29 360 360 ASN ASN A . n A 1 30 CYS 30 361 361 CYS CYS A . n A 1 31 VAL 31 362 362 VAL VAL A . n A 1 32 ALA 32 363 363 ALA ALA A . n A 1 33 ASP 33 364 364 ASP ASP A . n A 1 34 TYR 34 365 365 TYR TYR A . n A 1 35 SER 35 366 366 SER SER A . n A 1 36 VAL 36 367 367 VAL VAL A . n A 1 37 LEU 37 368 368 LEU LEU A . n A 1 38 TYR 38 369 369 TYR TYR A . n A 1 39 ASN 39 370 370 ASN ASN A . n A 1 40 PHE 40 371 371 PHE PHE A . n A 1 41 ALA 41 372 372 ALA ALA A . n A 1 42 PRO 42 373 373 PRO PRO A . n A 1 43 PHE 43 374 374 PHE PHE A . n A 1 44 PHE 44 375 375 PHE PHE A . n A 1 45 ALA 45 376 376 ALA ALA A . n A 1 46 PHE 46 377 377 PHE PHE A . n A 1 47 LYS 47 378 378 LYS LYS A . n A 1 48 CYS 48 379 379 CYS CYS A . n A 1 49 TYR 49 380 380 TYR TYR A . n A 1 50 GLY 50 381 381 GLY GLY A . n A 1 51 VAL 51 382 382 VAL VAL A . n A 1 52 SER 52 383 383 SER SER A . n A 1 53 PRO 53 384 384 PRO PRO A . n A 1 54 THR 54 385 385 THR THR A . n A 1 55 LYS 55 386 386 LYS LYS A . n A 1 56 LEU 56 387 387 LEU LEU A . n A 1 57 ASN 57 388 388 ASN ASN A . n A 1 58 ASP 58 389 389 ASP ASP A . n A 1 59 LEU 59 390 390 LEU LEU A . n A 1 60 CYS 60 391 391 CYS CYS A . n A 1 61 PHE 61 392 392 PHE PHE A . n A 1 62 THR 62 393 393 THR THR A . n A 1 63 ASN 63 394 394 ASN ASN A . n A 1 64 VAL 64 395 395 VAL VAL A . n A 1 65 TYR 65 396 396 TYR TYR A . n A 1 66 ALA 66 397 397 ALA ALA A . n A 1 67 ASP 67 398 398 ASP ASP A . n A 1 68 SER 68 399 399 SER SER A . n A 1 69 PHE 69 400 400 PHE PHE A . n A 1 70 VAL 70 401 401 VAL VAL A . n A 1 71 ILE 71 402 402 ILE ILE A . n A 1 72 ARG 72 403 403 ARG ARG A . n A 1 73 GLY 73 404 404 GLY GLY A . n A 1 74 ASN 74 405 405 ASN ASN A . n A 1 75 GLU 75 406 406 GLU GLU A . n A 1 76 VAL 76 407 407 VAL VAL A . n A 1 77 SER 77 408 408 SER SER A . n A 1 78 GLN 78 409 409 GLN GLN A . n A 1 79 ILE 79 410 410 ILE ILE A . n A 1 80 ALA 80 411 411 ALA ALA A . n A 1 81 PRO 81 412 412 PRO PRO A . n A 1 82 GLY 82 413 413 GLY GLY A . n A 1 83 GLN 83 414 414 GLN GLN A . n A 1 84 THR 84 415 415 THR THR A . n A 1 85 GLY 85 416 416 GLY GLY A . n A 1 86 ASN 86 417 417 ASN ASN A . n A 1 87 ILE 87 418 418 ILE ILE A . n A 1 88 ALA 88 419 419 ALA ALA A . n A 1 89 ASP 89 420 420 ASP ASP A . n A 1 90 TYR 90 421 421 TYR TYR A . n A 1 91 ASN 91 422 422 ASN ASN A . n A 1 92 TYR 92 423 423 TYR TYR A . n A 1 93 LYS 93 424 424 LYS LYS A . n A 1 94 LEU 94 425 425 LEU LEU A . n A 1 95 PRO 95 426 426 PRO PRO A . n A 1 96 ASP 96 427 427 ASP ASP A . n A 1 97 ASP 97 428 428 ASP ASP A . n A 1 98 PHE 98 429 429 PHE PHE A . n A 1 99 THR 99 430 430 THR THR A . n A 1 100 GLY 100 431 431 GLY GLY A . n A 1 101 CYS 101 432 432 CYS CYS A . n A 1 102 VAL 102 433 433 VAL VAL A . n A 1 103 ILE 103 434 434 ILE ILE A . n A 1 104 ALA 104 435 435 ALA ALA A . n A 1 105 TRP 105 436 436 TRP TRP A . n A 1 106 ASN 106 437 437 ASN ASN A . n A 1 107 SER 107 438 438 SER SER A . n A 1 108 ASN 108 439 439 ASN ASN A . n A 1 109 LYS 109 440 440 LYS LYS A . n A 1 110 LEU 110 441 441 LEU LEU A . n A 1 111 ASP 111 442 442 ASP ASP A . n A 1 112 SER 112 443 443 SER SER A . n A 1 113 LYS 113 444 444 LYS LYS A . n A 1 114 VAL 114 445 445 VAL VAL A . n A 1 115 SER 115 446 446 SER SER A . n A 1 116 GLY 116 447 447 GLY GLY A . n A 1 117 ASN 117 448 448 ASN ASN A . n A 1 118 TYR 118 449 449 TYR TYR A . n A 1 119 ASN 119 450 450 ASN ASN A . n A 1 120 TYR 120 451 451 TYR TYR A . n A 1 121 LEU 121 452 452 LEU LEU A . n A 1 122 TYR 122 453 453 TYR TYR A . n A 1 123 ARG 123 454 454 ARG ARG A . n A 1 124 LEU 124 455 455 LEU LEU A . n A 1 125 PHE 125 456 456 PHE PHE A . n A 1 126 ARG 126 457 457 ARG ARG A . n A 1 127 LYS 127 458 458 LYS LYS A . n A 1 128 SER 128 459 459 SER SER A . n A 1 129 LYS 129 460 460 LYS LYS A . n A 1 130 LEU 130 461 461 LEU LEU A . n A 1 131 LYS 131 462 462 LYS LYS A . n A 1 132 PRO 132 463 463 PRO PRO A . n A 1 133 PHE 133 464 464 PHE PHE A . n A 1 134 GLU 134 465 465 GLU GLU A . n A 1 135 ARG 135 466 466 ARG ARG A . n A 1 136 ASP 136 467 467 ASP ASP A . n A 1 137 ILE 137 468 468 ILE ILE A . n A 1 138 SER 138 469 469 SER SER A . n A 1 139 THR 139 470 470 THR THR A . n A 1 140 GLU 140 471 471 GLU GLU A . n A 1 141 ILE 141 472 472 ILE ILE A . n A 1 142 TYR 142 473 473 TYR TYR A . n A 1 143 GLN 143 474 474 GLN GLN A . n A 1 144 ALA 144 475 475 ALA ALA A . n A 1 145 GLY 145 476 476 GLY GLY A . n A 1 146 ASN 146 477 477 ASN ASN A . n A 1 147 LYS 147 478 478 LYS LYS A . n A 1 148 PRO 148 479 479 PRO PRO A . n A 1 149 CYS 149 480 480 CYS CYS A . n A 1 150 ASN 150 481 481 ASN ASN A . n A 1 151 GLY 151 482 482 GLY GLY A . n A 1 152 VAL 152 483 483 VAL VAL A . n A 1 153 ALA 153 484 484 ALA ALA A . n A 1 154 GLY 154 485 485 GLY GLY A . n A 1 155 PHE 155 486 486 PHE PHE A . n A 1 156 ASN 156 487 487 ASN ASN A . n A 1 157 CYS 157 488 488 CYS CYS A . n A 1 158 TYR 158 489 489 TYR TYR A . n A 1 159 PHE 159 490 490 PHE PHE A . n A 1 160 PRO 160 491 491 PRO PRO A . n A 1 161 LEU 161 492 492 LEU LEU A . n A 1 162 GLN 162 493 493 GLN GLN A . n A 1 163 SER 163 494 494 SER SER A . n A 1 164 TYR 164 495 495 TYR TYR A . n A 1 165 GLY 165 496 496 GLY GLY A . n A 1 166 PHE 166 497 497 PHE PHE A . n A 1 167 ARG 167 498 498 ARG ARG A . n A 1 168 PRO 168 499 499 PRO PRO A . n A 1 169 THR 169 500 500 THR THR A . n A 1 170 TYR 170 501 501 TYR TYR A . n A 1 171 GLY 171 502 502 GLY GLY A . n A 1 172 VAL 172 503 503 VAL VAL A . n A 1 173 GLY 173 504 504 GLY GLY A . n A 1 174 HIS 174 505 505 HIS HIS A . n A 1 175 GLN 175 506 506 GLN GLN A . n A 1 176 PRO 176 507 507 PRO PRO A . n A 1 177 TYR 177 508 508 TYR TYR A . n A 1 178 ARG 178 509 509 ARG ARG A . n A 1 179 VAL 179 510 510 VAL VAL A . n A 1 180 VAL 180 511 511 VAL VAL A . n A 1 181 VAL 181 512 512 VAL VAL A . n A 1 182 LEU 182 513 513 LEU LEU A . n A 1 183 SER 183 514 514 SER SER A . n A 1 184 PHE 184 515 515 PHE PHE A . n A 1 185 GLU 185 516 516 GLU GLU A . n A 1 186 LEU 186 517 517 LEU LEU A . n A 1 187 LEU 187 518 518 LEU LEU A . n A 1 188 HIS 188 519 519 HIS HIS A . n A 1 189 ALA 189 520 520 ALA ALA A . n A 1 190 PRO 190 521 521 PRO PRO A . n A 1 191 ALA 191 522 522 ALA ALA A . n A 1 192 THR 192 523 523 THR THR A . n A 1 193 VAL 193 524 524 VAL VAL A . n A 1 194 CYS 194 525 525 CYS CYS A . n A 1 195 GLY 195 526 526 GLY GLY A . n A 1 196 PRO 196 527 527 PRO PRO A . n B 2 1 GLN 1 1 1 GLN GLN C . n B 2 2 VAL 2 2 2 VAL VAL C . n B 2 3 GLN 3 3 3 GLN GLN C . n B 2 4 LEU 4 4 4 LEU LEU C . n B 2 5 VAL 5 5 5 VAL VAL C . n B 2 6 GLN 6 6 6 GLN GLN C . n B 2 7 SER 7 7 7 SER SER C . n B 2 8 GLY 8 8 8 GLY GLY C . n B 2 9 ALA 9 9 9 ALA ALA C . n B 2 10 GLU 10 10 10 GLU GLU C . n B 2 11 VAL 11 11 11 VAL VAL C . n B 2 12 LYS 12 12 12 LYS LYS C . n B 2 13 LYS 13 13 13 LYS LYS C . n B 2 14 PRO 14 14 14 PRO PRO C . n B 2 15 GLY 15 15 15 GLY GLY C . n B 2 16 ALA 16 16 16 ALA ALA C . n B 2 17 SER 17 17 17 SER SER C . n B 2 18 VAL 18 18 18 VAL VAL C . n B 2 19 LYS 19 19 19 LYS LYS C . n B 2 20 VAL 20 20 20 VAL VAL C . n B 2 21 SER 21 21 21 SER SER C . n B 2 22 CYS 22 22 22 CYS CYS C . n B 2 23 LYS 23 23 23 LYS LYS C . n B 2 24 ALA 24 24 24 ALA ALA C . n B 2 25 SER 25 25 25 SER SER C . n B 2 26 GLY 26 26 26 GLY GLY C . n B 2 27 TYR 27 27 27 TYR TYR C . n B 2 28 PRO 28 28 28 PRO PRO C . n B 2 29 PHE 29 29 29 PHE PHE C . n B 2 30 THR 30 30 30 THR THR C . n B 2 31 SER 31 31 31 SER SER C . n B 2 32 TYR 32 32 32 TYR TYR C . n B 2 33 GLY 33 33 33 GLY GLY C . n B 2 34 ILE 34 34 34 ILE ILE C . n B 2 35 SER 35 35 35 SER SER C . n B 2 36 TRP 36 36 36 TRP TRP C . n B 2 37 VAL 37 37 37 VAL VAL C . n B 2 38 ARG 38 38 38 ARG ARG C . n B 2 39 GLN 39 39 39 GLN GLN C . n B 2 40 ALA 40 40 40 ALA ALA C . n B 2 41 PRO 41 41 41 PRO PRO C . n B 2 42 GLY 42 42 42 GLY GLY C . n B 2 43 GLN 43 43 43 GLN GLN C . n B 2 44 GLY 44 44 44 GLY GLY C . n B 2 45 LEU 45 45 45 LEU LEU C . n B 2 46 GLU 46 46 46 GLU GLU C . n B 2 47 TRP 47 47 47 TRP TRP C . n B 2 48 MET 48 48 48 MET MET C . n B 2 49 GLY 49 49 49 GLY GLY C . n B 2 50 TRP 50 50 50 TRP TRP C . n B 2 51 ILE 51 51 51 ILE ILE C . n B 2 52 SER 52 52 52 SER SER C . n B 2 53 THR 53 53 53 THR THR C . n B 2 54 TYR 54 54 54 TYR TYR C . n B 2 55 ASN 55 55 55 ASN ASN C . n B 2 56 GLY 56 56 56 GLY GLY C . n B 2 57 ASN 57 57 57 ASN ASN C . n B 2 58 THR 58 58 58 THR THR C . n B 2 59 ASN 59 59 59 ASN ASN C . n B 2 60 TYR 60 60 60 TYR TYR C . n B 2 61 ALA 61 61 61 ALA ALA C . n B 2 62 GLN 62 62 62 GLN GLN C . n B 2 63 LYS 63 63 63 LYS LYS C . n B 2 64 PHE 64 64 64 PHE PHE C . n B 2 65 GLN 65 65 65 GLN GLN C . n B 2 66 GLY 66 66 66 GLY GLY C . n B 2 67 ARG 67 67 67 ARG ARG C . n B 2 68 VAL 68 68 68 VAL VAL C . n B 2 69 THR 69 69 69 THR THR C . n B 2 70 MET 70 70 70 MET MET C . n B 2 71 THR 71 71 71 THR THR C . n B 2 72 THR 72 72 72 THR THR C . n B 2 73 ASP 73 73 73 ASP ASP C . n B 2 74 THR 74 74 74 THR THR C . n B 2 75 SER 75 75 75 SER SER C . n B 2 76 THR 76 76 76 THR THR C . n B 2 77 THR 77 77 77 THR THR C . n B 2 78 THR 78 78 78 THR THR C . n B 2 79 GLY 79 79 79 GLY GLY C . n B 2 80 TYR 80 80 80 TYR TYR C . n B 2 81 MET 81 81 81 MET MET C . n B 2 82 GLU 82 82 82 GLU GLU C . n B 2 83 LEU 83 83 83 LEU LEU C . n B 2 84 ARG 84 84 84 ARG ARG C . n B 2 85 ARG 85 85 85 ARG ARG C . n B 2 86 LEU 86 86 86 LEU LEU C . n B 2 87 ARG 87 87 87 ARG ARG C . n B 2 88 SER 88 88 88 SER SER C . n B 2 89 ASP 89 89 89 ASP ASP C . n B 2 90 ASP 90 90 90 ASP ASP C . n B 2 91 THR 91 91 91 THR THR C . n B 2 92 ALA 92 92 92 ALA ALA C . n B 2 93 VAL 93 93 93 VAL VAL C . n B 2 94 TYR 94 94 94 TYR TYR C . n B 2 95 TYR 95 95 95 TYR TYR C . n B 2 96 CYS 96 96 96 CYS CYS C . n B 2 97 ALA 97 97 97 ALA ALA C . n B 2 98 ARG 98 98 98 ARG ARG C . n B 2 99 ASP 99 99 99 ASP ASP C . n B 2 100 TYR 100 100 100 TYR TYR C . n B 2 101 THR 101 101 101 THR THR C . n B 2 102 ARG 102 102 102 ARG ARG C . n B 2 103 GLY 103 103 103 GLY GLY C . n B 2 104 ALA 104 104 104 ALA ALA C . n B 2 105 TRP 105 105 105 TRP TRP C . n B 2 106 PHE 106 106 106 PHE PHE C . n B 2 107 GLY 107 107 107 GLY GLY C . n B 2 108 GLU 108 108 108 GLU GLU C . n B 2 109 SER 109 109 109 SER SER C . n B 2 110 LEU 110 110 110 LEU LEU C . n B 2 111 ILE 111 111 111 ILE ILE C . n B 2 112 GLY 112 112 112 GLY GLY C . n B 2 113 GLY 113 113 113 GLY GLY C . n B 2 114 PHE 114 114 114 PHE PHE C . n B 2 115 ASP 115 115 115 ASP ASP C . n B 2 116 ASN 116 116 116 ASN ASN C . n B 2 117 TRP 117 117 117 TRP TRP C . n B 2 118 GLY 118 118 118 GLY GLY C . n B 2 119 GLN 119 119 119 GLN GLN C . n B 2 120 GLY 120 120 120 GLY GLY C . n B 2 121 THR 121 121 121 THR THR C . n B 2 122 LEU 122 122 122 LEU LEU C . n B 2 123 VAL 123 123 123 VAL VAL C . n B 2 124 THR 124 124 ? ? ? C . n B 2 125 VAL 125 125 ? ? ? C . n B 2 126 SER 126 126 ? ? ? C . n C 3 1 GLU 1 1 1 GLU GLU B . n C 3 2 ILE 2 2 2 ILE ILE B . n C 3 3 VAL 3 3 3 VAL VAL B . n C 3 4 LEU 4 4 4 LEU LEU B . n C 3 5 THR 5 5 5 THR THR B . n C 3 6 GLN 6 6 6 GLN GLN B . n C 3 7 SER 7 7 7 SER SER B . n C 3 8 PRO 8 8 8 PRO PRO B . n C 3 9 GLY 9 9 9 GLY GLY B . n C 3 10 THR 10 10 10 THR THR B . n C 3 11 LEU 11 11 11 LEU LEU B . n C 3 12 SER 12 12 12 SER SER B . n C 3 13 LEU 13 13 13 LEU LEU B . n C 3 14 SER 14 14 14 SER SER B . n C 3 15 PRO 15 15 15 PRO PRO B . n C 3 16 GLY 16 16 16 GLY GLY B . n C 3 17 GLU 17 17 17 GLU GLU B . n C 3 18 ARG 18 18 18 ARG ARG B . n C 3 19 ALA 19 19 19 ALA ALA B . n C 3 20 THR 20 20 20 THR THR B . n C 3 21 LEU 21 21 21 LEU LEU B . n C 3 22 SER 22 22 22 SER SER B . n C 3 23 CYS 23 23 23 CYS CYS B . n C 3 24 ARG 24 24 24 ARG ARG B . n C 3 25 ALA 25 25 25 ALA ALA B . n C 3 26 SER 26 26 26 SER SER B . n C 3 27 GLN 27 27 27 GLN GLN B . n C 3 28 THR 28 28 28 THR THR B . n C 3 29 VAL 29 29 29 VAL VAL B . n C 3 30 SER 30 30 30 SER SER B . n C 3 31 SER 31 31 31 SER SER B . n C 3 32 THR 32 32 32 THR THR B . n C 3 33 SER 33 33 33 SER SER B . n C 3 34 LEU 34 34 34 LEU LEU B . n C 3 35 ALA 35 35 35 ALA ALA B . n C 3 36 TRP 36 36 36 TRP TRP B . n C 3 37 TYR 37 37 37 TYR TYR B . n C 3 38 GLN 38 38 38 GLN GLN B . n C 3 39 GLN 39 39 39 GLN GLN B . n C 3 40 LYS 40 40 40 LYS LYS B . n C 3 41 PRO 41 41 41 PRO PRO B . n C 3 42 GLY 42 42 42 GLY GLY B . n C 3 43 GLN 43 43 43 GLN GLN B . n C 3 44 ALA 44 44 44 ALA ALA B . n C 3 45 PRO 45 45 45 PRO PRO B . n C 3 46 ARG 46 46 46 ARG ARG B . n C 3 47 LEU 47 47 47 LEU LEU B . n C 3 48 LEU 48 48 48 LEU LEU B . n C 3 49 ILE 49 49 49 ILE ILE B . n C 3 50 TYR 50 50 50 TYR TYR B . n C 3 51 GLY 51 51 51 GLY GLY B . n C 3 52 ALA 52 52 52 ALA ALA B . n C 3 53 SER 53 53 53 SER SER B . n C 3 54 SER 54 54 54 SER SER B . n C 3 55 ARG 55 55 55 ARG ARG B . n C 3 56 ALA 56 56 56 ALA ALA B . n C 3 57 THR 57 57 57 THR THR B . n C 3 58 GLY 58 58 58 GLY GLY B . n C 3 59 ILE 59 59 59 ILE ILE B . n C 3 60 PRO 60 60 60 PRO PRO B . n C 3 61 ASP 61 61 61 ASP ASP B . n C 3 62 ARG 62 62 62 ARG ARG B . n C 3 63 PHE 63 63 63 PHE PHE B . n C 3 64 SER 64 64 64 SER SER B . n C 3 65 GLY 65 65 65 GLY GLY B . n C 3 66 SER 66 66 66 SER SER B . n C 3 67 GLY 67 67 67 GLY GLY B . n C 3 68 SER 68 68 68 SER SER B . n C 3 69 GLY 69 69 69 GLY GLY B . n C 3 70 THR 70 70 70 THR THR B . n C 3 71 ASP 71 71 71 ASP ASP B . n C 3 72 PHE 72 72 72 PHE PHE B . n C 3 73 THR 73 73 73 THR THR B . n C 3 74 LEU 74 74 74 LEU LEU B . n C 3 75 THR 75 75 75 THR THR B . n C 3 76 ILE 76 76 76 ILE ILE B . n C 3 77 SER 77 77 77 SER SER B . n C 3 78 ARG 78 78 78 ARG ARG B . n C 3 79 LEU 79 79 79 LEU LEU B . n C 3 80 GLU 80 80 80 GLU GLU B . n C 3 81 PRO 81 81 81 PRO PRO B . n C 3 82 GLU 82 82 82 GLU GLU B . n C 3 83 ASP 83 83 83 ASP ASP B . n C 3 84 PHE 84 84 84 PHE PHE B . n C 3 85 ALA 85 85 85 ALA ALA B . n C 3 86 VAL 86 86 86 VAL VAL B . n C 3 87 TYR 87 87 87 TYR TYR B . n C 3 88 TYR 88 88 88 TYR TYR B . n C 3 89 CYS 89 89 89 CYS CYS B . n C 3 90 GLN 90 90 90 GLN GLN B . n C 3 91 GLN 91 91 91 GLN GLN B . n C 3 92 HIS 92 92 92 HIS HIS B . n C 3 93 ASP 93 93 93 ASP ASP B . n C 3 94 THR 94 94 94 THR THR B . n C 3 95 SER 95 95 95 SER SER B . n C 3 96 LEU 96 96 96 LEU LEU B . n C 3 97 THR 97 97 97 THR THR B . n C 3 98 PHE 98 98 98 PHE PHE B . n C 3 99 GLY 99 99 99 GLY GLY B . n C 3 100 GLY 100 100 100 GLY GLY B . n C 3 101 GLY 101 101 101 GLY GLY B . n C 3 102 THR 102 102 102 THR THR B . n C 3 103 LYS 103 103 103 LYS LYS B . n C 3 104 VAL 104 104 104 VAL VAL B . n C 3 105 GLU 105 105 105 GLU GLU B . n C 3 106 ILE 106 106 106 ILE ILE B . n C 3 107 LYS 107 107 107 LYS LYS B . n C 3 108 ARG 108 108 108 ARG ARG B . n C 3 109 THR 109 109 ? ? ? B . n C 3 110 VAL 110 110 ? ? ? B . n C 3 111 ALA 111 111 ? ? ? B . n C 3 112 ALA 112 112 ? ? ? B . n C 3 113 PRO 113 113 ? ? ? B . n C 3 114 SER 114 114 ? ? ? B . n C 3 115 VAL 115 115 ? ? ? B . n C 3 116 PHE 116 116 ? ? ? B . n C 3 117 ILE 117 117 ? ? ? B . n C 3 118 PHE 118 118 ? ? ? B . n C 3 119 PRO 119 119 ? ? ? B . n C 3 120 PRO 120 120 ? ? ? B . n C 3 121 SER 121 121 ? ? ? B . n C 3 122 ASP 122 122 ? ? ? B . n C 3 123 GLU 123 123 ? ? ? B . n C 3 124 GLN 124 124 ? ? ? B . n C 3 125 LEU 125 125 ? ? ? B . n C 3 126 LYS 126 126 ? ? ? B . n C 3 127 SER 127 127 ? ? ? B . n C 3 128 GLY 128 128 ? ? ? B . n C 3 129 THR 129 129 ? ? ? B . n C 3 130 ALA 130 130 ? ? ? B . n C 3 131 SER 131 131 ? ? ? B . n C 3 132 VAL 132 132 ? ? ? B . n C 3 133 VAL 133 133 ? ? ? B . n C 3 134 CYS 134 134 ? ? ? B . n C 3 135 LEU 135 135 ? ? ? B . n C 3 136 LEU 136 136 ? ? ? B . n C 3 137 ASN 137 137 ? ? ? B . n C 3 138 ASN 138 138 ? ? ? B . n C 3 139 PHE 139 139 ? ? ? B . n C 3 140 TYR 140 140 ? ? ? B . n C 3 141 PRO 141 141 ? ? ? B . n C 3 142 ARG 142 142 ? ? ? B . n C 3 143 GLU 143 143 ? ? ? B . n C 3 144 ALA 144 144 ? ? ? B . n C 3 145 LYS 145 145 ? ? ? B . n C 3 146 VAL 146 146 ? ? ? B . n C 3 147 GLN 147 147 ? ? ? B . n C 3 148 TRP 148 148 ? ? ? B . n C 3 149 LYS 149 149 ? ? ? B . n C 3 150 VAL 150 150 ? ? ? B . n C 3 151 ASP 151 151 ? ? ? B . n C 3 152 ASN 152 152 ? ? ? B . n C 3 153 ALA 153 153 ? ? ? B . n C 3 154 LEU 154 154 ? ? ? B . n C 3 155 GLN 155 155 ? ? ? B . n C 3 156 SER 156 156 ? ? ? B . n C 3 157 GLY 157 157 ? ? ? B . n C 3 158 ASN 158 158 ? ? ? B . n C 3 159 SER 159 159 ? ? ? B . n C 3 160 GLN 160 160 ? ? ? B . n C 3 161 GLU 161 161 ? ? ? B . n C 3 162 SER 162 162 ? ? ? B . n C 3 163 VAL 163 163 ? ? ? B . n C 3 164 THR 164 164 ? ? ? B . n C 3 165 GLU 165 165 ? ? ? B . n C 3 166 GLN 166 166 ? ? ? B . n C 3 167 ASP 167 167 ? ? ? B . n C 3 168 SER 168 168 ? ? ? B . n C 3 169 LYS 169 169 ? ? ? B . n C 3 170 ASP 170 170 ? ? ? B . n C 3 171 SER 171 171 ? ? ? B . n C 3 172 THR 172 172 ? ? ? B . n C 3 173 TYR 173 173 ? ? ? B . n C 3 174 SER 174 174 ? ? ? B . n C 3 175 LEU 175 175 ? ? ? B . n C 3 176 SER 176 176 ? ? ? B . n C 3 177 SER 177 177 ? ? ? B . n C 3 178 THR 178 178 ? ? ? B . n C 3 179 LEU 179 179 ? ? ? B . n C 3 180 THR 180 180 ? ? ? B . n C 3 181 LEU 181 181 ? ? ? B . n C 3 182 SER 182 182 ? ? ? B . n C 3 183 LYS 183 183 ? ? ? B . n C 3 184 ALA 184 184 ? ? ? B . n C 3 185 ASP 185 185 ? ? ? B . n C 3 186 TYR 186 186 ? ? ? B . n C 3 187 GLU 187 187 ? ? ? B . n C 3 188 LYS 188 188 ? ? ? B . n C 3 189 HIS 189 189 ? ? ? B . n C 3 190 LYS 190 190 ? ? ? B . n C 3 191 VAL 191 191 ? ? ? B . n C 3 192 TYR 192 192 ? ? ? B . n C 3 193 ALA 193 193 ? ? ? B . n C 3 194 CYS 194 194 ? ? ? B . n C 3 195 GLU 195 195 ? ? ? B . n C 3 196 VAL 196 196 ? ? ? B . n C 3 197 THR 197 197 ? ? ? B . n C 3 198 HIS 198 198 ? ? ? B . n C 3 199 GLN 199 199 ? ? ? B . n C 3 200 GLY 200 200 ? ? ? B . n C 3 201 LEU 201 201 ? ? ? B . n C 3 202 SER 202 202 ? ? ? B . n C 3 203 SER 203 203 ? ? ? B . n C 3 204 PRO 204 204 ? ? ? B . n C 3 205 VAL 205 205 ? ? ? B . n C 3 206 THR 206 206 ? ? ? B . n C 3 207 LYS 207 207 ? ? ? B . n C 3 208 SER 208 208 ? ? ? B . n C 3 209 PHE 209 209 ? ? ? B . n C 3 210 ASN 210 210 ? ? ? B . n C 3 211 ARG 211 211 ? ? ? B . n C 3 212 GLY 212 212 ? ? ? B . n C 3 213 GLU 213 213 ? ? ? B . n C 3 214 CYS 214 214 ? ? ? B . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email xiangxixx@ibp.ac.cn _pdbx_contact_author.name_first Xiangxi _pdbx_contact_author.name_last Wang _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-4669-0575 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-10-19 2 'Structure model' 1 1 2022-11-02 3 'Structure model' 1 2 2022-11-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_PubMed' 2 2 'Structure model' '_citation.title' 3 3 'Structure model' '_citation.journal_volume' 4 3 'Structure model' '_citation.page_first' # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version 1.19.2_4158: _software.pdbx_ordinal 1 # _pdbx_entry_details.entry_id 7YR0 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _em_3d_fitting.entry_id 7YR0 _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol ? _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 7YR0 _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 647807 _em_3d_reconstruction.resolution 3.98 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7.4 _em_buffer.specimen_id 1 _em_buffer.name ? # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.details _em_entity_assembly.name _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.entity_id_list _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details 1 0 ? 'BA.2.75 S trimer in complex with S309' RECOMBINANT COMPLEX '1, 2, 3' ? ? 2 1 ? 'BA.2.75 S trimer' RECOMBINANT COMPLEX 1 ? ? 3 1 ? S309 RECOMBINANT COMPLEX 2 ? ? 4 1 ? Ig@protein RECOMBINANT COMPLEX 3 ? ? # _em_imaging.id 1 _em_imaging.entry_id 7YR0 _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max 1800 _em_imaging.nominal_defocus_min 1200 _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.entry_id 7YR0 _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7YR0 _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OG1 _pdbx_validate_close_contact.auth_asym_id_1 C _pdbx_validate_close_contact.auth_comp_id_1 THR _pdbx_validate_close_contact.auth_seq_id_1 69 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OE2 _pdbx_validate_close_contact.auth_asym_id_2 C _pdbx_validate_close_contact.auth_comp_id_2 GLU _pdbx_validate_close_contact.auth_seq_id_2 82 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.16 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 359 ? ? -122.80 -167.13 2 1 VAL A 382 ? ? 61.94 -151.68 3 1 ALA A 411 ? ? -170.87 144.50 4 1 ASP A 428 ? ? -96.75 31.88 5 1 ASP C 89 ? ? -98.86 35.69 6 1 THR B 32 ? ? -92.75 48.55 7 1 SER B 53 ? ? -140.24 13.10 8 1 ILE B 59 ? ? 43.04 74.53 9 1 PHE B 84 ? ? 35.29 47.91 10 1 SER B 95 ? ? 56.58 -122.91 11 1 LYS B 107 ? ? 60.17 65.04 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 378 ? CG ? A LYS 47 CG 2 1 Y 1 A LYS 378 ? CD ? A LYS 47 CD 3 1 Y 1 A LYS 378 ? CE ? A LYS 47 CE 4 1 Y 1 A LYS 378 ? NZ ? A LYS 47 NZ 5 1 Y 1 A LYS 386 ? CG ? A LYS 55 CG 6 1 Y 1 A LYS 386 ? CD ? A LYS 55 CD 7 1 Y 1 A LYS 386 ? CE ? A LYS 55 CE 8 1 Y 1 A LYS 386 ? NZ ? A LYS 55 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C THR 124 ? B THR 124 2 1 Y 1 C VAL 125 ? B VAL 125 3 1 Y 1 C SER 126 ? B SER 126 4 1 Y 1 B THR 109 ? C THR 109 5 1 Y 1 B VAL 110 ? C VAL 110 6 1 Y 1 B ALA 111 ? C ALA 111 7 1 Y 1 B ALA 112 ? C ALA 112 8 1 Y 1 B PRO 113 ? C PRO 113 9 1 Y 1 B SER 114 ? C SER 114 10 1 Y 1 B VAL 115 ? C VAL 115 11 1 Y 1 B PHE 116 ? C PHE 116 12 1 Y 1 B ILE 117 ? C ILE 117 13 1 Y 1 B PHE 118 ? C PHE 118 14 1 Y 1 B PRO 119 ? C PRO 119 15 1 Y 1 B PRO 120 ? C PRO 120 16 1 Y 1 B SER 121 ? C SER 121 17 1 Y 1 B ASP 122 ? C ASP 122 18 1 Y 1 B GLU 123 ? C GLU 123 19 1 Y 1 B GLN 124 ? C GLN 124 20 1 Y 1 B LEU 125 ? C LEU 125 21 1 Y 1 B LYS 126 ? C LYS 126 22 1 Y 1 B SER 127 ? C SER 127 23 1 Y 1 B GLY 128 ? C GLY 128 24 1 Y 1 B THR 129 ? C THR 129 25 1 Y 1 B ALA 130 ? C ALA 130 26 1 Y 1 B SER 131 ? C SER 131 27 1 Y 1 B VAL 132 ? C VAL 132 28 1 Y 1 B VAL 133 ? C VAL 133 29 1 Y 1 B CYS 134 ? C CYS 134 30 1 Y 1 B LEU 135 ? C LEU 135 31 1 Y 1 B LEU 136 ? C LEU 136 32 1 Y 1 B ASN 137 ? C ASN 137 33 1 Y 1 B ASN 138 ? C ASN 138 34 1 Y 1 B PHE 139 ? C PHE 139 35 1 Y 1 B TYR 140 ? C TYR 140 36 1 Y 1 B PRO 141 ? C PRO 141 37 1 Y 1 B ARG 142 ? C ARG 142 38 1 Y 1 B GLU 143 ? C GLU 143 39 1 Y 1 B ALA 144 ? C ALA 144 40 1 Y 1 B LYS 145 ? C LYS 145 41 1 Y 1 B VAL 146 ? C VAL 146 42 1 Y 1 B GLN 147 ? C GLN 147 43 1 Y 1 B TRP 148 ? C TRP 148 44 1 Y 1 B LYS 149 ? C LYS 149 45 1 Y 1 B VAL 150 ? C VAL 150 46 1 Y 1 B ASP 151 ? C ASP 151 47 1 Y 1 B ASN 152 ? C ASN 152 48 1 Y 1 B ALA 153 ? C ALA 153 49 1 Y 1 B LEU 154 ? C LEU 154 50 1 Y 1 B GLN 155 ? C GLN 155 51 1 Y 1 B SER 156 ? C SER 156 52 1 Y 1 B GLY 157 ? C GLY 157 53 1 Y 1 B ASN 158 ? C ASN 158 54 1 Y 1 B SER 159 ? C SER 159 55 1 Y 1 B GLN 160 ? C GLN 160 56 1 Y 1 B GLU 161 ? C GLU 161 57 1 Y 1 B SER 162 ? C SER 162 58 1 Y 1 B VAL 163 ? C VAL 163 59 1 Y 1 B THR 164 ? C THR 164 60 1 Y 1 B GLU 165 ? C GLU 165 61 1 Y 1 B GLN 166 ? C GLN 166 62 1 Y 1 B ASP 167 ? C ASP 167 63 1 Y 1 B SER 168 ? C SER 168 64 1 Y 1 B LYS 169 ? C LYS 169 65 1 Y 1 B ASP 170 ? C ASP 170 66 1 Y 1 B SER 171 ? C SER 171 67 1 Y 1 B THR 172 ? C THR 172 68 1 Y 1 B TYR 173 ? C TYR 173 69 1 Y 1 B SER 174 ? C SER 174 70 1 Y 1 B LEU 175 ? C LEU 175 71 1 Y 1 B SER 176 ? C SER 176 72 1 Y 1 B SER 177 ? C SER 177 73 1 Y 1 B THR 178 ? C THR 178 74 1 Y 1 B LEU 179 ? C LEU 179 75 1 Y 1 B THR 180 ? C THR 180 76 1 Y 1 B LEU 181 ? C LEU 181 77 1 Y 1 B SER 182 ? C SER 182 78 1 Y 1 B LYS 183 ? C LYS 183 79 1 Y 1 B ALA 184 ? C ALA 184 80 1 Y 1 B ASP 185 ? C ASP 185 81 1 Y 1 B TYR 186 ? C TYR 186 82 1 Y 1 B GLU 187 ? C GLU 187 83 1 Y 1 B LYS 188 ? C LYS 188 84 1 Y 1 B HIS 189 ? C HIS 189 85 1 Y 1 B LYS 190 ? C LYS 190 86 1 Y 1 B VAL 191 ? C VAL 191 87 1 Y 1 B TYR 192 ? C TYR 192 88 1 Y 1 B ALA 193 ? C ALA 193 89 1 Y 1 B CYS 194 ? C CYS 194 90 1 Y 1 B GLU 195 ? C GLU 195 91 1 Y 1 B VAL 196 ? C VAL 196 92 1 Y 1 B THR 197 ? C THR 197 93 1 Y 1 B HIS 198 ? C HIS 198 94 1 Y 1 B GLN 199 ? C GLN 199 95 1 Y 1 B GLY 200 ? C GLY 200 96 1 Y 1 B LEU 201 ? C LEU 201 97 1 Y 1 B SER 202 ? C SER 202 98 1 Y 1 B SER 203 ? C SER 203 99 1 Y 1 B PRO 204 ? C PRO 204 100 1 Y 1 B VAL 205 ? C VAL 205 101 1 Y 1 B THR 206 ? C THR 206 102 1 Y 1 B LYS 207 ? C LYS 207 103 1 Y 1 B SER 208 ? C SER 208 104 1 Y 1 B PHE 209 ? C PHE 209 105 1 Y 1 B ASN 210 ? C ASN 210 106 1 Y 1 B ARG 211 ? C ARG 211 107 1 Y 1 B GLY 212 ? C GLY 212 108 1 Y 1 B GLU 213 ? C GLU 213 109 1 Y 1 B CYS 214 ? C CYS 214 # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type NONE _em_ctf_correction.details ? # loop_ _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue 2 1 ? ? 9606 ? ? 'Severe acute respiratory syndrome coronavirus 2' ? ? 3 2 ? ? 9606 ? ? 'Homo sapiens' ? ? 4 3 ? ? 9606 ? ? 'Homo sapiens' ? ? # loop_ _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain 2 1 ? 9606 'Homo sapiens' ? ? 3 2 ? 9606 'Homo sapiens' ? ? 4 3 ? 9606 'Homo sapiens' ? ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 60 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? _em_image_recording.avg_electron_dose_per_subtomogram ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? ? ? 1 ? ? 2 'IMAGE ACQUISITION' ? ? ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? ? ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? ? ? ? ? ? 8 'MODEL REFINEMENT' ? ? ? ? ? ? 9 OTHER ? ? ? ? ? ? 10 'INITIAL EULER ASSIGNMENT' ? ? ? 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? ? ? 1 ? ? 12 CLASSIFICATION ? ? ? 1 ? ? 13 RECONSTRUCTION ? ? ? 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero D 4 NAG 1 D NAG 1 A NAG 528 n D 4 NAG 2 D NAG 2 A NAG 530 n D 4 BMA 3 D BMA 3 A BMA 531 n D 4 FUC 4 D FUC 4 A FUC 529 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 4 'DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-ROH' 'Glycam Condensed Sequence' GMML 1.0 2 4 'WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1221m-1a_1-5]/1-1-2-3/a4-b1_a6-d1_b4-c1' WURCS PDB2Glycan 1.1.0 3 4 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}[(6+1)][a-L-Fucp]{}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 4 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 4 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 4 4 FUC C1 O1 1 NAG O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 4 NAG 1 n 4 NAG 2 n 4 BMA 3 n 4 FUC 4 n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 BMA ? ? BMA ? ? 'SUBJECT OF INVESTIGATION' ? 2 FUC ? ? FUC ? ? 'SUBJECT OF INVESTIGATION' ? 3 NAG ? ? NAG ? ? 'SUBJECT OF INVESTIGATION' ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ? #