data_8CK0 # _entry.id 8CK0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.369 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8CK0 pdb_00008ck0 10.2210/pdb8ck0/pdb WWPDB D_1292127614 ? ? EMDB EMD-16688 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Carin1 bacteriophage portal assembly' _pdbx_database_related.db_id EMD-16688 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8CK0 _pdbx_database_status.recvd_initial_deposition_date 2023-02-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID ;d'Acapito, A. ; 1 0000-0002-1534-4813 'Neumann, E.' 2 0000-0003-4100-5054 'Schoehn, G.' 3 0000-0002-1459-3201 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Virol. _citation.journal_id_ASTM JOVIAM _citation.journal_id_CSD 0825 _citation.journal_id_ISSN 1098-5514 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 97 _citation.language ? _citation.page_first e0024823 _citation.page_last e0024823 _citation.title 'Structural Study of the Cobetia marina Bacteriophage 1 (Carin-1) by Cryo-EM.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1128/jvi.00248-23 _citation.pdbx_database_id_PubMed 36943070 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary ;d'Acapito, A. ; 1 0000-0002-1534-4813 primary 'Roret, T.' 2 0000-0003-2528-5789 primary 'Zarkadas, E.' 3 0000-0002-9276-9831 primary 'Mocaer, P.Y.' 4 ? primary 'Lelchat, F.' 5 0000-0002-5544-0666 primary 'Baudoux, A.C.' 6 0000-0002-3117-4324 primary 'Schoehn, G.' 7 0000-0002-1459-3201 primary 'Neumann, E.' 8 0000-0003-4100-5054 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8CK0 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8CK0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description 'Portal protein' _entity.formula_weight 62227.227 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKVETKRQRYNKRLHALKTERSSWEGSWRDISDHIQPWRSRFCMSDSNKGNRHNKALVDDTPFKASRTLASGMMSGLTSP ARPWFKLAIDNPELMESAAVKQWLYLVTQRMQSVMSKSNLYNQLHQLYGELGTFGTSCILIVEDKEDVIRAIPMTVGTYY LATSSRGMVDTIYREMRKTVRQLVQEFGLKNCSNSVQTMYDNDNLEAWVEVVHLIEPNDERNEGKLDSKNKPYRSVYYES GCTEDKLLRESGFDEFPGVAPRWEVLGDDVYGYGPGHAALGPSRSLQVMQKKKAQAVEKQINPPMNVPSSSKSKPFSLLP GSLNYYDAAMGGQQMAQPSQSVNLNLNSIMEDIVAHQTSIKETFYADLFMMIANDQRSNITAREIQERHEEKLLALGPVV ERLDTEALDPMIDRVFGIMMRGGHLPPPPEEIQGVDLNVQYISVMAQAQKLVGIGAIERITSFVGNLAGADPSALDKLNI DQAIDQYSNSVSAPPDIIRTDDEVAEIRQARAQQQQQAQAMEMAQQAAQGAKLLSETDAGTGQNGLSAMMQQMGLA ; _entity_poly.pdbx_seq_one_letter_code_can ;MKVETKRQRYNKRLHALKTERSSWEGSWRDISDHIQPWRSRFCMSDSNKGNRHNKALVDDTPFKASRTLASGMMSGLTSP ARPWFKLAIDNPELMESAAVKQWLYLVTQRMQSVMSKSNLYNQLHQLYGELGTFGTSCILIVEDKEDVIRAIPMTVGTYY LATSSRGMVDTIYREMRKTVRQLVQEFGLKNCSNSVQTMYDNDNLEAWVEVVHLIEPNDERNEGKLDSKNKPYRSVYYES GCTEDKLLRESGFDEFPGVAPRWEVLGDDVYGYGPGHAALGPSRSLQVMQKKKAQAVEKQINPPMNVPSSSKSKPFSLLP GSLNYYDAAMGGQQMAQPSQSVNLNLNSIMEDIVAHQTSIKETFYADLFMMIANDQRSNITAREIQERHEEKLLALGPVV ERLDTEALDPMIDRVFGIMMRGGHLPPPPEEIQGVDLNVQYISVMAQAQKLVGIGAIERITSFVGNLAGADPSALDKLNI DQAIDQYSNSVSAPPDIIRTDDEVAEIRQARAQQQQQAQAMEMAQQAAQGAKLLSETDAGTGQNGLSAMMQQMGLA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 VAL n 1 4 GLU n 1 5 THR n 1 6 LYS n 1 7 ARG n 1 8 GLN n 1 9 ARG n 1 10 TYR n 1 11 ASN n 1 12 LYS n 1 13 ARG n 1 14 LEU n 1 15 HIS n 1 16 ALA n 1 17 LEU n 1 18 LYS n 1 19 THR n 1 20 GLU n 1 21 ARG n 1 22 SER n 1 23 SER n 1 24 TRP n 1 25 GLU n 1 26 GLY n 1 27 SER n 1 28 TRP n 1 29 ARG n 1 30 ASP n 1 31 ILE n 1 32 SER n 1 33 ASP n 1 34 HIS n 1 35 ILE n 1 36 GLN n 1 37 PRO n 1 38 TRP n 1 39 ARG n 1 40 SER n 1 41 ARG n 1 42 PHE n 1 43 CYS n 1 44 MET n 1 45 SER n 1 46 ASP n 1 47 SER n 1 48 ASN n 1 49 LYS n 1 50 GLY n 1 51 ASN n 1 52 ARG n 1 53 HIS n 1 54 ASN n 1 55 LYS n 1 56 ALA n 1 57 LEU n 1 58 VAL n 1 59 ASP n 1 60 ASP n 1 61 THR n 1 62 PRO n 1 63 PHE n 1 64 LYS n 1 65 ALA n 1 66 SER n 1 67 ARG n 1 68 THR n 1 69 LEU n 1 70 ALA n 1 71 SER n 1 72 GLY n 1 73 MET n 1 74 MET n 1 75 SER n 1 76 GLY n 1 77 LEU n 1 78 THR n 1 79 SER n 1 80 PRO n 1 81 ALA n 1 82 ARG n 1 83 PRO n 1 84 TRP n 1 85 PHE n 1 86 LYS n 1 87 LEU n 1 88 ALA n 1 89 ILE n 1 90 ASP n 1 91 ASN n 1 92 PRO n 1 93 GLU n 1 94 LEU n 1 95 MET n 1 96 GLU n 1 97 SER n 1 98 ALA n 1 99 ALA n 1 100 VAL n 1 101 LYS n 1 102 GLN n 1 103 TRP n 1 104 LEU n 1 105 TYR n 1 106 LEU n 1 107 VAL n 1 108 THR n 1 109 GLN n 1 110 ARG n 1 111 MET n 1 112 GLN n 1 113 SER n 1 114 VAL n 1 115 MET n 1 116 SER n 1 117 LYS n 1 118 SER n 1 119 ASN n 1 120 LEU n 1 121 TYR n 1 122 ASN n 1 123 GLN n 1 124 LEU n 1 125 HIS n 1 126 GLN n 1 127 LEU n 1 128 TYR n 1 129 GLY n 1 130 GLU n 1 131 LEU n 1 132 GLY n 1 133 THR n 1 134 PHE n 1 135 GLY n 1 136 THR n 1 137 SER n 1 138 CYS n 1 139 ILE n 1 140 LEU n 1 141 ILE n 1 142 VAL n 1 143 GLU n 1 144 ASP n 1 145 LYS n 1 146 GLU n 1 147 ASP n 1 148 VAL n 1 149 ILE n 1 150 ARG n 1 151 ALA n 1 152 ILE n 1 153 PRO n 1 154 MET n 1 155 THR n 1 156 VAL n 1 157 GLY n 1 158 THR n 1 159 TYR n 1 160 TYR n 1 161 LEU n 1 162 ALA n 1 163 THR n 1 164 SER n 1 165 SER n 1 166 ARG n 1 167 GLY n 1 168 MET n 1 169 VAL n 1 170 ASP n 1 171 THR n 1 172 ILE n 1 173 TYR n 1 174 ARG n 1 175 GLU n 1 176 MET n 1 177 ARG n 1 178 LYS n 1 179 THR n 1 180 VAL n 1 181 ARG n 1 182 GLN n 1 183 LEU n 1 184 VAL n 1 185 GLN n 1 186 GLU n 1 187 PHE n 1 188 GLY n 1 189 LEU n 1 190 LYS n 1 191 ASN n 1 192 CYS n 1 193 SER n 1 194 ASN n 1 195 SER n 1 196 VAL n 1 197 GLN n 1 198 THR n 1 199 MET n 1 200 TYR n 1 201 ASP n 1 202 ASN n 1 203 ASP n 1 204 ASN n 1 205 LEU n 1 206 GLU n 1 207 ALA n 1 208 TRP n 1 209 VAL n 1 210 GLU n 1 211 VAL n 1 212 VAL n 1 213 HIS n 1 214 LEU n 1 215 ILE n 1 216 GLU n 1 217 PRO n 1 218 ASN n 1 219 ASP n 1 220 GLU n 1 221 ARG n 1 222 ASN n 1 223 GLU n 1 224 GLY n 1 225 LYS n 1 226 LEU n 1 227 ASP n 1 228 SER n 1 229 LYS n 1 230 ASN n 1 231 LYS n 1 232 PRO n 1 233 TYR n 1 234 ARG n 1 235 SER n 1 236 VAL n 1 237 TYR n 1 238 TYR n 1 239 GLU n 1 240 SER n 1 241 GLY n 1 242 CYS n 1 243 THR n 1 244 GLU n 1 245 ASP n 1 246 LYS n 1 247 LEU n 1 248 LEU n 1 249 ARG n 1 250 GLU n 1 251 SER n 1 252 GLY n 1 253 PHE n 1 254 ASP n 1 255 GLU n 1 256 PHE n 1 257 PRO n 1 258 GLY n 1 259 VAL n 1 260 ALA n 1 261 PRO n 1 262 ARG n 1 263 TRP n 1 264 GLU n 1 265 VAL n 1 266 LEU n 1 267 GLY n 1 268 ASP n 1 269 ASP n 1 270 VAL n 1 271 TYR n 1 272 GLY n 1 273 TYR n 1 274 GLY n 1 275 PRO n 1 276 GLY n 1 277 HIS n 1 278 ALA n 1 279 ALA n 1 280 LEU n 1 281 GLY n 1 282 PRO n 1 283 SER n 1 284 ARG n 1 285 SER n 1 286 LEU n 1 287 GLN n 1 288 VAL n 1 289 MET n 1 290 GLN n 1 291 LYS n 1 292 LYS n 1 293 LYS n 1 294 ALA n 1 295 GLN n 1 296 ALA n 1 297 VAL n 1 298 GLU n 1 299 LYS n 1 300 GLN n 1 301 ILE n 1 302 ASN n 1 303 PRO n 1 304 PRO n 1 305 MET n 1 306 ASN n 1 307 VAL n 1 308 PRO n 1 309 SER n 1 310 SER n 1 311 SER n 1 312 LYS n 1 313 SER n 1 314 LYS n 1 315 PRO n 1 316 PHE n 1 317 SER n 1 318 LEU n 1 319 LEU n 1 320 PRO n 1 321 GLY n 1 322 SER n 1 323 LEU n 1 324 ASN n 1 325 TYR n 1 326 TYR n 1 327 ASP n 1 328 ALA n 1 329 ALA n 1 330 MET n 1 331 GLY n 1 332 GLY n 1 333 GLN n 1 334 GLN n 1 335 MET n 1 336 ALA n 1 337 GLN n 1 338 PRO n 1 339 SER n 1 340 GLN n 1 341 SER n 1 342 VAL n 1 343 ASN n 1 344 LEU n 1 345 ASN n 1 346 LEU n 1 347 ASN n 1 348 SER n 1 349 ILE n 1 350 MET n 1 351 GLU n 1 352 ASP n 1 353 ILE n 1 354 VAL n 1 355 ALA n 1 356 HIS n 1 357 GLN n 1 358 THR n 1 359 SER n 1 360 ILE n 1 361 LYS n 1 362 GLU n 1 363 THR n 1 364 PHE n 1 365 TYR n 1 366 ALA n 1 367 ASP n 1 368 LEU n 1 369 PHE n 1 370 MET n 1 371 MET n 1 372 ILE n 1 373 ALA n 1 374 ASN n 1 375 ASP n 1 376 GLN n 1 377 ARG n 1 378 SER n 1 379 ASN n 1 380 ILE n 1 381 THR n 1 382 ALA n 1 383 ARG n 1 384 GLU n 1 385 ILE n 1 386 GLN n 1 387 GLU n 1 388 ARG n 1 389 HIS n 1 390 GLU n 1 391 GLU n 1 392 LYS n 1 393 LEU n 1 394 LEU n 1 395 ALA n 1 396 LEU n 1 397 GLY n 1 398 PRO n 1 399 VAL n 1 400 VAL n 1 401 GLU n 1 402 ARG n 1 403 LEU n 1 404 ASP n 1 405 THR n 1 406 GLU n 1 407 ALA n 1 408 LEU n 1 409 ASP n 1 410 PRO n 1 411 MET n 1 412 ILE n 1 413 ASP n 1 414 ARG n 1 415 VAL n 1 416 PHE n 1 417 GLY n 1 418 ILE n 1 419 MET n 1 420 MET n 1 421 ARG n 1 422 GLY n 1 423 GLY n 1 424 HIS n 1 425 LEU n 1 426 PRO n 1 427 PRO n 1 428 PRO n 1 429 PRO n 1 430 GLU n 1 431 GLU n 1 432 ILE n 1 433 GLN n 1 434 GLY n 1 435 VAL n 1 436 ASP n 1 437 LEU n 1 438 ASN n 1 439 VAL n 1 440 GLN n 1 441 TYR n 1 442 ILE n 1 443 SER n 1 444 VAL n 1 445 MET n 1 446 ALA n 1 447 GLN n 1 448 ALA n 1 449 GLN n 1 450 LYS n 1 451 LEU n 1 452 VAL n 1 453 GLY n 1 454 ILE n 1 455 GLY n 1 456 ALA n 1 457 ILE n 1 458 GLU n 1 459 ARG n 1 460 ILE n 1 461 THR n 1 462 SER n 1 463 PHE n 1 464 VAL n 1 465 GLY n 1 466 ASN n 1 467 LEU n 1 468 ALA n 1 469 GLY n 1 470 ALA n 1 471 ASP n 1 472 PRO n 1 473 SER n 1 474 ALA n 1 475 LEU n 1 476 ASP n 1 477 LYS n 1 478 LEU n 1 479 ASN n 1 480 ILE n 1 481 ASP n 1 482 GLN n 1 483 ALA n 1 484 ILE n 1 485 ASP n 1 486 GLN n 1 487 TYR n 1 488 SER n 1 489 ASN n 1 490 SER n 1 491 VAL n 1 492 SER n 1 493 ALA n 1 494 PRO n 1 495 PRO n 1 496 ASP n 1 497 ILE n 1 498 ILE n 1 499 ARG n 1 500 THR n 1 501 ASP n 1 502 ASP n 1 503 GLU n 1 504 VAL n 1 505 ALA n 1 506 GLU n 1 507 ILE n 1 508 ARG n 1 509 GLN n 1 510 ALA n 1 511 ARG n 1 512 ALA n 1 513 GLN n 1 514 GLN n 1 515 GLN n 1 516 GLN n 1 517 GLN n 1 518 ALA n 1 519 GLN n 1 520 ALA n 1 521 MET n 1 522 GLU n 1 523 MET n 1 524 ALA n 1 525 GLN n 1 526 GLN n 1 527 ALA n 1 528 ALA n 1 529 GLN n 1 530 GLY n 1 531 ALA n 1 532 LYS n 1 533 LEU n 1 534 LEU n 1 535 SER n 1 536 GLU n 1 537 THR n 1 538 ASP n 1 539 ALA n 1 540 GLY n 1 541 THR n 1 542 GLY n 1 543 GLN n 1 544 ASN n 1 545 GLY n 1 546 LEU n 1 547 SER n 1 548 ALA n 1 549 MET n 1 550 MET n 1 551 GLN n 1 552 GLN n 1 553 MET n 1 554 GLY n 1 555 LEU n 1 556 ALA n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 556 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Bacteriophage sp.' _entity_src_nat.pdbx_ncbi_taxonomy_id 3801 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details 'Cobetia Marina Virus 1' _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8CK0 _struct_ref.pdbx_db_accession 8CK0 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8CK0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 556 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 8CK0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 556 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 556 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8CK0 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 8CK0 _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.006 ? 18108 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.996 ? 24557 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 4.818 ? 2484 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.046 ? 2687 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.008 ? 3228 ? f_plane_restr ? ? # _struct.entry_id 8CK0 _struct.title 'Carin1 bacteriophage portal assembly' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8CK0 _struct_keywords.text 'Bacteriophages; virus structure, Cryo-EM, marine podovirus, portal protein, tail, VIRUS' _struct_keywords.pdbx_keywords VIRUS # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 5 ? SER A 22 ? THR A 5 SER A 22 1 ? 18 HELX_P HELX_P2 AA2 TRP A 24 ? ILE A 35 ? TRP A 24 ILE A 35 1 ? 12 HELX_P HELX_P3 AA3 ASP A 60 ? THR A 78 ? ASP A 60 THR A 78 1 ? 19 HELX_P HELX_P4 AA4 ASN A 91 ? SER A 97 ? ASN A 91 SER A 97 1 ? 7 HELX_P HELX_P5 AA5 SER A 97 ? SER A 118 ? SER A 97 SER A 118 1 ? 22 HELX_P HELX_P6 AA6 ASN A 119 ? GLY A 135 ? ASN A 119 GLY A 135 1 ? 17 HELX_P HELX_P7 AA7 VAL A 180 ? PHE A 187 ? VAL A 180 PHE A 187 1 ? 8 HELX_P HELX_P8 AA8 GLY A 188 ? CYS A 192 ? GLY A 188 CYS A 192 5 ? 5 HELX_P HELX_P9 AA9 SER A 193 ? ASN A 202 ? SER A 193 ASN A 202 1 ? 10 HELX_P HELX_P10 AB1 GLY A 274 ? ASN A 302 ? GLY A 274 ASN A 302 1 ? 29 HELX_P HELX_P11 AB2 LYS A 314 ? LEU A 318 ? LYS A 314 LEU A 318 5 ? 5 HELX_P HELX_P12 AB3 ASN A 345 ? PHE A 364 ? ASN A 345 PHE A 364 1 ? 20 HELX_P HELX_P13 AB4 GLU A 401 ? GLU A 406 ? GLU A 401 GLU A 406 1 ? 6 HELX_P HELX_P14 AB5 LEU A 408 ? GLY A 422 ? LEU A 408 GLY A 422 1 ? 15 HELX_P HELX_P15 AB6 GLN A 447 ? LEU A 467 ? GLN A 447 LEU A 467 1 ? 21 HELX_P HELX_P16 AB7 ALA A 468 ? ALA A 470 ? ALA A 468 ALA A 470 5 ? 3 HELX_P HELX_P17 AB8 ASP A 471 ? LYS A 477 ? ASP A 471 LYS A 477 5 ? 7 HELX_P HELX_P18 AB9 ASN A 479 ? SER A 492 ? ASN A 479 SER A 492 1 ? 14 HELX_P HELX_P19 AC1 PRO A 494 ? ILE A 498 ? PRO A 494 ILE A 498 5 ? 5 HELX_P HELX_P20 AC2 THR A 500 ? MET A 523 ? THR A 500 MET A 523 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 3 ? AA3 ? 5 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 86 ? ALA A 88 ? LYS A 86 ALA A 88 AA1 2 ASN A 438 ? GLN A 440 ? ASN A 438 GLN A 440 AA2 1 ILE A 149 ? MET A 154 ? ILE A 149 MET A 154 AA2 2 CYS A 138 ? GLU A 143 ? CYS A 138 GLU A 143 AA2 3 GLY A 258 ? VAL A 259 ? GLY A 258 VAL A 259 AA3 1 TYR A 159 ? THR A 163 ? TYR A 159 THR A 163 AA3 2 VAL A 169 ? THR A 179 ? VAL A 169 THR A 179 AA3 3 TRP A 208 ? PRO A 217 ? TRP A 208 PRO A 217 AA3 4 TYR A 233 ? TYR A 238 ? TYR A 233 TYR A 238 AA3 5 ARG A 249 ? PHE A 253 ? ARG A 249 PHE A 253 AA4 1 MET A 305 ? ASN A 306 ? MET A 305 ASN A 306 AA4 2 GLN A 337 ? PRO A 338 ? GLN A 337 PRO A 338 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 86 ? N LYS A 86 O GLN A 440 ? O GLN A 440 AA2 1 2 O ILE A 152 ? O ILE A 152 N LEU A 140 ? N LEU A 140 AA2 2 3 N ILE A 139 ? N ILE A 139 O VAL A 259 ? O VAL A 259 AA3 1 2 N TYR A 160 ? N TYR A 160 O TYR A 173 ? O TYR A 173 AA3 2 3 N ILE A 172 ? N ILE A 172 O ILE A 215 ? O ILE A 215 AA3 3 4 N VAL A 212 ? N VAL A 212 O TYR A 238 ? O TYR A 238 AA3 4 5 N TYR A 233 ? N TYR A 233 O PHE A 253 ? O PHE A 253 AA4 1 2 N ASN A 306 ? N ASN A 306 O GLN A 337 ? O GLN A 337 # _atom_sites.entry_id 8CK0 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 LYS 2 2 ? ? ? A . n A 1 3 VAL 3 3 ? ? ? A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 ARG 7 7 7 ARG ARG A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 ARG 9 9 9 ARG ARG A . n A 1 10 TYR 10 10 10 TYR TYR A . n A 1 11 ASN 11 11 11 ASN ASN A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 HIS 15 15 15 HIS HIS A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 THR 19 19 19 THR THR A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 TRP 24 24 24 TRP TRP A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 TRP 28 28 28 TRP TRP A . n A 1 29 ARG 29 29 29 ARG ARG A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 HIS 34 34 34 HIS HIS A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 GLN 36 36 36 GLN GLN A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 TRP 38 38 38 TRP TRP A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 CYS 43 43 43 CYS CYS A . n A 1 44 MET 44 44 44 MET MET A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 ASN 48 48 48 ASN ASN A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 HIS 53 53 53 HIS HIS A . n A 1 54 ASN 54 54 54 ASN ASN A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 ARG 67 67 67 ARG ARG A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 MET 73 73 73 MET MET A . n A 1 74 MET 74 74 74 MET MET A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 PRO 80 80 80 PRO PRO A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 PRO 83 83 83 PRO PRO A . n A 1 84 TRP 84 84 84 TRP TRP A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 LYS 86 86 86 LYS LYS A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 ASN 91 91 91 ASN ASN A . n A 1 92 PRO 92 92 92 PRO PRO A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 MET 95 95 95 MET MET A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 GLN 102 102 102 GLN GLN A . n A 1 103 TRP 103 103 103 TRP TRP A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 TYR 105 105 105 TYR TYR A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 VAL 107 107 107 VAL VAL A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 GLN 109 109 109 GLN GLN A . n A 1 110 ARG 110 110 110 ARG ARG A . n A 1 111 MET 111 111 111 MET MET A . n A 1 112 GLN 112 112 112 GLN GLN A . n A 1 113 SER 113 113 113 SER SER A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 MET 115 115 115 MET MET A . n A 1 116 SER 116 116 116 SER SER A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 ASN 119 119 119 ASN ASN A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 TYR 121 121 121 TYR TYR A . n A 1 122 ASN 122 122 122 ASN ASN A . n A 1 123 GLN 123 123 123 GLN GLN A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 HIS 125 125 125 HIS HIS A . n A 1 126 GLN 126 126 126 GLN GLN A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 TYR 128 128 128 TYR TYR A . n A 1 129 GLY 129 129 129 GLY GLY A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 LEU 131 131 131 LEU LEU A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 THR 133 133 133 THR THR A . n A 1 134 PHE 134 134 134 PHE PHE A . n A 1 135 GLY 135 135 135 GLY GLY A . n A 1 136 THR 136 136 136 THR THR A . n A 1 137 SER 137 137 137 SER SER A . n A 1 138 CYS 138 138 138 CYS CYS A . n A 1 139 ILE 139 139 139 ILE ILE A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 ILE 141 141 141 ILE ILE A . n A 1 142 VAL 142 142 142 VAL VAL A . n A 1 143 GLU 143 143 143 GLU GLU A . n A 1 144 ASP 144 144 144 ASP ASP A . n A 1 145 LYS 145 145 145 LYS LYS A . n A 1 146 GLU 146 146 146 GLU GLU A . n A 1 147 ASP 147 147 147 ASP ASP A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 ILE 149 149 149 ILE ILE A . n A 1 150 ARG 150 150 150 ARG ARG A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 ILE 152 152 152 ILE ILE A . n A 1 153 PRO 153 153 153 PRO PRO A . n A 1 154 MET 154 154 154 MET MET A . n A 1 155 THR 155 155 155 THR THR A . n A 1 156 VAL 156 156 156 VAL VAL A . n A 1 157 GLY 157 157 157 GLY GLY A . n A 1 158 THR 158 158 158 THR THR A . n A 1 159 TYR 159 159 159 TYR TYR A . n A 1 160 TYR 160 160 160 TYR TYR A . n A 1 161 LEU 161 161 161 LEU LEU A . n A 1 162 ALA 162 162 162 ALA ALA A . n A 1 163 THR 163 163 163 THR THR A . n A 1 164 SER 164 164 164 SER SER A . n A 1 165 SER 165 165 165 SER SER A . n A 1 166 ARG 166 166 166 ARG ARG A . n A 1 167 GLY 167 167 167 GLY GLY A . n A 1 168 MET 168 168 168 MET MET A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 ASP 170 170 170 ASP ASP A . n A 1 171 THR 171 171 171 THR THR A . n A 1 172 ILE 172 172 172 ILE ILE A . n A 1 173 TYR 173 173 173 TYR TYR A . n A 1 174 ARG 174 174 174 ARG ARG A . n A 1 175 GLU 175 175 175 GLU GLU A . n A 1 176 MET 176 176 176 MET MET A . n A 1 177 ARG 177 177 177 ARG ARG A . n A 1 178 LYS 178 178 178 LYS LYS A . n A 1 179 THR 179 179 179 THR THR A . n A 1 180 VAL 180 180 180 VAL VAL A . n A 1 181 ARG 181 181 181 ARG ARG A . n A 1 182 GLN 182 182 182 GLN GLN A . n A 1 183 LEU 183 183 183 LEU LEU A . n A 1 184 VAL 184 184 184 VAL VAL A . n A 1 185 GLN 185 185 185 GLN GLN A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 PHE 187 187 187 PHE PHE A . n A 1 188 GLY 188 188 188 GLY GLY A . n A 1 189 LEU 189 189 189 LEU LEU A . n A 1 190 LYS 190 190 190 LYS LYS A . n A 1 191 ASN 191 191 191 ASN ASN A . n A 1 192 CYS 192 192 192 CYS CYS A . n A 1 193 SER 193 193 193 SER SER A . n A 1 194 ASN 194 194 194 ASN ASN A . n A 1 195 SER 195 195 195 SER SER A . n A 1 196 VAL 196 196 196 VAL VAL A . n A 1 197 GLN 197 197 197 GLN GLN A . n A 1 198 THR 198 198 198 THR THR A . n A 1 199 MET 199 199 199 MET MET A . n A 1 200 TYR 200 200 200 TYR TYR A . n A 1 201 ASP 201 201 201 ASP ASP A . n A 1 202 ASN 202 202 202 ASN ASN A . n A 1 203 ASP 203 203 203 ASP ASP A . n A 1 204 ASN 204 204 204 ASN ASN A . n A 1 205 LEU 205 205 205 LEU LEU A . n A 1 206 GLU 206 206 206 GLU GLU A . n A 1 207 ALA 207 207 207 ALA ALA A . n A 1 208 TRP 208 208 208 TRP TRP A . n A 1 209 VAL 209 209 209 VAL VAL A . n A 1 210 GLU 210 210 210 GLU GLU A . n A 1 211 VAL 211 211 211 VAL VAL A . n A 1 212 VAL 212 212 212 VAL VAL A . n A 1 213 HIS 213 213 213 HIS HIS A . n A 1 214 LEU 214 214 214 LEU LEU A . n A 1 215 ILE 215 215 215 ILE ILE A . n A 1 216 GLU 216 216 216 GLU GLU A . n A 1 217 PRO 217 217 217 PRO PRO A . n A 1 218 ASN 218 218 218 ASN ASN A . n A 1 219 ASP 219 219 ? ? ? A . n A 1 220 GLU 220 220 ? ? ? A . n A 1 221 ARG 221 221 ? ? ? A . n A 1 222 ASN 222 222 ? ? ? A . n A 1 223 GLU 223 223 ? ? ? A . n A 1 224 GLY 224 224 ? ? ? A . n A 1 225 LYS 225 225 ? ? ? A . n A 1 226 LEU 226 226 ? ? ? A . n A 1 227 ASP 227 227 ? ? ? A . n A 1 228 SER 228 228 ? ? ? A . n A 1 229 LYS 229 229 ? ? ? A . n A 1 230 ASN 230 230 ? ? ? A . n A 1 231 LYS 231 231 231 LYS LYS A . n A 1 232 PRO 232 232 232 PRO PRO A . n A 1 233 TYR 233 233 233 TYR TYR A . n A 1 234 ARG 234 234 234 ARG ARG A . n A 1 235 SER 235 235 235 SER SER A . n A 1 236 VAL 236 236 236 VAL VAL A . n A 1 237 TYR 237 237 237 TYR TYR A . n A 1 238 TYR 238 238 238 TYR TYR A . n A 1 239 GLU 239 239 239 GLU GLU A . n A 1 240 SER 240 240 240 SER SER A . n A 1 241 GLY 241 241 241 GLY GLY A . n A 1 242 CYS 242 242 242 CYS CYS A . n A 1 243 THR 243 243 243 THR THR A . n A 1 244 GLU 244 244 244 GLU GLU A . n A 1 245 ASP 245 245 245 ASP ASP A . n A 1 246 LYS 246 246 246 LYS LYS A . n A 1 247 LEU 247 247 247 LEU LEU A . n A 1 248 LEU 248 248 248 LEU LEU A . n A 1 249 ARG 249 249 249 ARG ARG A . n A 1 250 GLU 250 250 250 GLU GLU A . n A 1 251 SER 251 251 251 SER SER A . n A 1 252 GLY 252 252 252 GLY GLY A . n A 1 253 PHE 253 253 253 PHE PHE A . n A 1 254 ASP 254 254 254 ASP ASP A . n A 1 255 GLU 255 255 255 GLU GLU A . n A 1 256 PHE 256 256 256 PHE PHE A . n A 1 257 PRO 257 257 257 PRO PRO A . n A 1 258 GLY 258 258 258 GLY GLY A . n A 1 259 VAL 259 259 259 VAL VAL A . n A 1 260 ALA 260 260 260 ALA ALA A . n A 1 261 PRO 261 261 261 PRO PRO A . n A 1 262 ARG 262 262 262 ARG ARG A . n A 1 263 TRP 263 263 263 TRP TRP A . n A 1 264 GLU 264 264 264 GLU GLU A . n A 1 265 VAL 265 265 265 VAL VAL A . n A 1 266 LEU 266 266 266 LEU LEU A . n A 1 267 GLY 267 267 267 GLY GLY A . n A 1 268 ASP 268 268 268 ASP ASP A . n A 1 269 ASP 269 269 269 ASP ASP A . n A 1 270 VAL 270 270 270 VAL VAL A . n A 1 271 TYR 271 271 271 TYR TYR A . n A 1 272 GLY 272 272 272 GLY GLY A . n A 1 273 TYR 273 273 273 TYR TYR A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 PRO 275 275 275 PRO PRO A . n A 1 276 GLY 276 276 276 GLY GLY A . n A 1 277 HIS 277 277 277 HIS HIS A . n A 1 278 ALA 278 278 278 ALA ALA A . n A 1 279 ALA 279 279 279 ALA ALA A . n A 1 280 LEU 280 280 280 LEU LEU A . n A 1 281 GLY 281 281 281 GLY GLY A . n A 1 282 PRO 282 282 282 PRO PRO A . n A 1 283 SER 283 283 283 SER SER A . n A 1 284 ARG 284 284 284 ARG ARG A . n A 1 285 SER 285 285 285 SER SER A . n A 1 286 LEU 286 286 286 LEU LEU A . n A 1 287 GLN 287 287 287 GLN GLN A . n A 1 288 VAL 288 288 288 VAL VAL A . n A 1 289 MET 289 289 289 MET MET A . n A 1 290 GLN 290 290 290 GLN GLN A . n A 1 291 LYS 291 291 291 LYS LYS A . n A 1 292 LYS 292 292 292 LYS LYS A . n A 1 293 LYS 293 293 293 LYS LYS A . n A 1 294 ALA 294 294 294 ALA ALA A . n A 1 295 GLN 295 295 295 GLN GLN A . n A 1 296 ALA 296 296 296 ALA ALA A . n A 1 297 VAL 297 297 297 VAL VAL A . n A 1 298 GLU 298 298 298 GLU GLU A . n A 1 299 LYS 299 299 299 LYS LYS A . n A 1 300 GLN 300 300 300 GLN GLN A . n A 1 301 ILE 301 301 301 ILE ILE A . n A 1 302 ASN 302 302 302 ASN ASN A . n A 1 303 PRO 303 303 303 PRO PRO A . n A 1 304 PRO 304 304 304 PRO PRO A . n A 1 305 MET 305 305 305 MET MET A . n A 1 306 ASN 306 306 306 ASN ASN A . n A 1 307 VAL 307 307 307 VAL VAL A . n A 1 308 PRO 308 308 308 PRO PRO A . n A 1 309 SER 309 309 309 SER SER A . n A 1 310 SER 310 310 310 SER SER A . n A 1 311 SER 311 311 311 SER SER A . n A 1 312 LYS 312 312 312 LYS LYS A . n A 1 313 SER 313 313 313 SER SER A . n A 1 314 LYS 314 314 314 LYS LYS A . n A 1 315 PRO 315 315 315 PRO PRO A . n A 1 316 PHE 316 316 316 PHE PHE A . n A 1 317 SER 317 317 317 SER SER A . n A 1 318 LEU 318 318 318 LEU LEU A . n A 1 319 LEU 319 319 319 LEU LEU A . n A 1 320 PRO 320 320 320 PRO PRO A . n A 1 321 GLY 321 321 321 GLY GLY A . n A 1 322 SER 322 322 322 SER SER A . n A 1 323 LEU 323 323 323 LEU LEU A . n A 1 324 ASN 324 324 324 ASN ASN A . n A 1 325 TYR 325 325 325 TYR TYR A . n A 1 326 TYR 326 326 326 TYR TYR A . n A 1 327 ASP 327 327 327 ASP ASP A . n A 1 328 ALA 328 328 328 ALA ALA A . n A 1 329 ALA 329 329 329 ALA ALA A . n A 1 330 MET 330 330 330 MET MET A . n A 1 331 GLY 331 331 331 GLY GLY A . n A 1 332 GLY 332 332 332 GLY GLY A . n A 1 333 GLN 333 333 333 GLN GLN A . n A 1 334 GLN 334 334 334 GLN GLN A . n A 1 335 MET 335 335 335 MET MET A . n A 1 336 ALA 336 336 336 ALA ALA A . n A 1 337 GLN 337 337 337 GLN GLN A . n A 1 338 PRO 338 338 338 PRO PRO A . n A 1 339 SER 339 339 339 SER SER A . n A 1 340 GLN 340 340 340 GLN GLN A . n A 1 341 SER 341 341 341 SER SER A . n A 1 342 VAL 342 342 342 VAL VAL A . n A 1 343 ASN 343 343 343 ASN ASN A . n A 1 344 LEU 344 344 344 LEU LEU A . n A 1 345 ASN 345 345 345 ASN ASN A . n A 1 346 LEU 346 346 346 LEU LEU A . n A 1 347 ASN 347 347 347 ASN ASN A . n A 1 348 SER 348 348 348 SER SER A . n A 1 349 ILE 349 349 349 ILE ILE A . n A 1 350 MET 350 350 350 MET MET A . n A 1 351 GLU 351 351 351 GLU GLU A . n A 1 352 ASP 352 352 352 ASP ASP A . n A 1 353 ILE 353 353 353 ILE ILE A . n A 1 354 VAL 354 354 354 VAL VAL A . n A 1 355 ALA 355 355 355 ALA ALA A . n A 1 356 HIS 356 356 356 HIS HIS A . n A 1 357 GLN 357 357 357 GLN GLN A . n A 1 358 THR 358 358 358 THR THR A . n A 1 359 SER 359 359 359 SER SER A . n A 1 360 ILE 360 360 360 ILE ILE A . n A 1 361 LYS 361 361 361 LYS LYS A . n A 1 362 GLU 362 362 362 GLU GLU A . n A 1 363 THR 363 363 363 THR THR A . n A 1 364 PHE 364 364 364 PHE PHE A . n A 1 365 TYR 365 365 365 TYR TYR A . n A 1 366 ALA 366 366 366 ALA ALA A . n A 1 367 ASP 367 367 367 ASP ASP A . n A 1 368 LEU 368 368 368 LEU LEU A . n A 1 369 PHE 369 369 ? ? ? A . n A 1 370 MET 370 370 ? ? ? A . n A 1 371 MET 371 371 ? ? ? A . n A 1 372 ILE 372 372 ? ? ? A . n A 1 373 ALA 373 373 ? ? ? A . n A 1 374 ASN 374 374 ? ? ? A . n A 1 375 ASP 375 375 ? ? ? A . n A 1 376 GLN 376 376 ? ? ? A . n A 1 377 ARG 377 377 ? ? ? A . n A 1 378 SER 378 378 ? ? ? A . n A 1 379 ASN 379 379 ? ? ? A . n A 1 380 ILE 380 380 ? ? ? A . n A 1 381 THR 381 381 ? ? ? A . n A 1 382 ALA 382 382 ? ? ? A . n A 1 383 ARG 383 383 ? ? ? A . n A 1 384 GLU 384 384 ? ? ? A . n A 1 385 ILE 385 385 ? ? ? A . n A 1 386 GLN 386 386 ? ? ? A . n A 1 387 GLU 387 387 ? ? ? A . n A 1 388 ARG 388 388 ? ? ? A . n A 1 389 HIS 389 389 ? ? ? A . n A 1 390 GLU 390 390 ? ? ? A . n A 1 391 GLU 391 391 ? ? ? A . n A 1 392 LYS 392 392 ? ? ? A . n A 1 393 LEU 393 393 ? ? ? A . n A 1 394 LEU 394 394 ? ? ? A . n A 1 395 ALA 395 395 ? ? ? A . n A 1 396 LEU 396 396 ? ? ? A . n A 1 397 GLY 397 397 ? ? ? A . n A 1 398 PRO 398 398 ? ? ? A . n A 1 399 VAL 399 399 399 VAL VAL A . n A 1 400 VAL 400 400 400 VAL VAL A . n A 1 401 GLU 401 401 401 GLU GLU A . n A 1 402 ARG 402 402 402 ARG ARG A . n A 1 403 LEU 403 403 403 LEU LEU A . n A 1 404 ASP 404 404 404 ASP ASP A . n A 1 405 THR 405 405 405 THR THR A . n A 1 406 GLU 406 406 406 GLU GLU A . n A 1 407 ALA 407 407 407 ALA ALA A . n A 1 408 LEU 408 408 408 LEU LEU A . n A 1 409 ASP 409 409 409 ASP ASP A . n A 1 410 PRO 410 410 410 PRO PRO A . n A 1 411 MET 411 411 411 MET MET A . n A 1 412 ILE 412 412 412 ILE ILE A . n A 1 413 ASP 413 413 413 ASP ASP A . n A 1 414 ARG 414 414 414 ARG ARG A . n A 1 415 VAL 415 415 415 VAL VAL A . n A 1 416 PHE 416 416 416 PHE PHE A . n A 1 417 GLY 417 417 417 GLY GLY A . n A 1 418 ILE 418 418 418 ILE ILE A . n A 1 419 MET 419 419 419 MET MET A . n A 1 420 MET 420 420 420 MET MET A . n A 1 421 ARG 421 421 421 ARG ARG A . n A 1 422 GLY 422 422 422 GLY GLY A . n A 1 423 GLY 423 423 423 GLY GLY A . n A 1 424 HIS 424 424 424 HIS HIS A . n A 1 425 LEU 425 425 425 LEU LEU A . n A 1 426 PRO 426 426 426 PRO PRO A . n A 1 427 PRO 427 427 427 PRO PRO A . n A 1 428 PRO 428 428 428 PRO PRO A . n A 1 429 PRO 429 429 429 PRO PRO A . n A 1 430 GLU 430 430 430 GLU GLU A . n A 1 431 GLU 431 431 431 GLU GLU A . n A 1 432 ILE 432 432 432 ILE ILE A . n A 1 433 GLN 433 433 433 GLN GLN A . n A 1 434 GLY 434 434 434 GLY GLY A . n A 1 435 VAL 435 435 435 VAL VAL A . n A 1 436 ASP 436 436 436 ASP ASP A . n A 1 437 LEU 437 437 437 LEU LEU A . n A 1 438 ASN 438 438 438 ASN ASN A . n A 1 439 VAL 439 439 439 VAL VAL A . n A 1 440 GLN 440 440 440 GLN GLN A . n A 1 441 TYR 441 441 441 TYR TYR A . n A 1 442 ILE 442 442 442 ILE ILE A . n A 1 443 SER 443 443 443 SER SER A . n A 1 444 VAL 444 444 444 VAL VAL A . n A 1 445 MET 445 445 445 MET MET A . n A 1 446 ALA 446 446 446 ALA ALA A . n A 1 447 GLN 447 447 447 GLN GLN A . n A 1 448 ALA 448 448 448 ALA ALA A . n A 1 449 GLN 449 449 449 GLN GLN A . n A 1 450 LYS 450 450 450 LYS LYS A . n A 1 451 LEU 451 451 451 LEU LEU A . n A 1 452 VAL 452 452 452 VAL VAL A . n A 1 453 GLY 453 453 453 GLY GLY A . n A 1 454 ILE 454 454 454 ILE ILE A . n A 1 455 GLY 455 455 455 GLY GLY A . n A 1 456 ALA 456 456 456 ALA ALA A . n A 1 457 ILE 457 457 457 ILE ILE A . n A 1 458 GLU 458 458 458 GLU GLU A . n A 1 459 ARG 459 459 459 ARG ARG A . n A 1 460 ILE 460 460 460 ILE ILE A . n A 1 461 THR 461 461 461 THR THR A . n A 1 462 SER 462 462 462 SER SER A . n A 1 463 PHE 463 463 463 PHE PHE A . n A 1 464 VAL 464 464 464 VAL VAL A . n A 1 465 GLY 465 465 465 GLY GLY A . n A 1 466 ASN 466 466 466 ASN ASN A . n A 1 467 LEU 467 467 467 LEU LEU A . n A 1 468 ALA 468 468 468 ALA ALA A . n A 1 469 GLY 469 469 469 GLY GLY A . n A 1 470 ALA 470 470 470 ALA ALA A . n A 1 471 ASP 471 471 471 ASP ASP A . n A 1 472 PRO 472 472 472 PRO PRO A . n A 1 473 SER 473 473 473 SER SER A . n A 1 474 ALA 474 474 474 ALA ALA A . n A 1 475 LEU 475 475 475 LEU LEU A . n A 1 476 ASP 476 476 476 ASP ASP A . n A 1 477 LYS 477 477 477 LYS LYS A . n A 1 478 LEU 478 478 478 LEU LEU A . n A 1 479 ASN 479 479 479 ASN ASN A . n A 1 480 ILE 480 480 480 ILE ILE A . n A 1 481 ASP 481 481 481 ASP ASP A . n A 1 482 GLN 482 482 482 GLN GLN A . n A 1 483 ALA 483 483 483 ALA ALA A . n A 1 484 ILE 484 484 484 ILE ILE A . n A 1 485 ASP 485 485 485 ASP ASP A . n A 1 486 GLN 486 486 486 GLN GLN A . n A 1 487 TYR 487 487 487 TYR TYR A . n A 1 488 SER 488 488 488 SER SER A . n A 1 489 ASN 489 489 489 ASN ASN A . n A 1 490 SER 490 490 490 SER SER A . n A 1 491 VAL 491 491 491 VAL VAL A . n A 1 492 SER 492 492 492 SER SER A . n A 1 493 ALA 493 493 493 ALA ALA A . n A 1 494 PRO 494 494 494 PRO PRO A . n A 1 495 PRO 495 495 495 PRO PRO A . n A 1 496 ASP 496 496 496 ASP ASP A . n A 1 497 ILE 497 497 497 ILE ILE A . n A 1 498 ILE 498 498 498 ILE ILE A . n A 1 499 ARG 499 499 499 ARG ARG A . n A 1 500 THR 500 500 500 THR THR A . n A 1 501 ASP 501 501 501 ASP ASP A . n A 1 502 ASP 502 502 502 ASP ASP A . n A 1 503 GLU 503 503 503 GLU GLU A . n A 1 504 VAL 504 504 504 VAL VAL A . n A 1 505 ALA 505 505 505 ALA ALA A . n A 1 506 GLU 506 506 506 GLU GLU A . n A 1 507 ILE 507 507 507 ILE ILE A . n A 1 508 ARG 508 508 508 ARG ARG A . n A 1 509 GLN 509 509 509 GLN GLN A . n A 1 510 ALA 510 510 510 ALA ALA A . n A 1 511 ARG 511 511 511 ARG ARG A . n A 1 512 ALA 512 512 512 ALA ALA A . n A 1 513 GLN 513 513 513 GLN GLN A . n A 1 514 GLN 514 514 514 GLN GLN A . n A 1 515 GLN 515 515 515 GLN GLN A . n A 1 516 GLN 516 516 516 GLN GLN A . n A 1 517 GLN 517 517 517 GLN GLN A . n A 1 518 ALA 518 518 518 ALA ALA A . n A 1 519 GLN 519 519 519 GLN GLN A . n A 1 520 ALA 520 520 520 ALA ALA A . n A 1 521 MET 521 521 521 MET MET A . n A 1 522 GLU 522 522 522 GLU GLU A . n A 1 523 MET 523 523 523 MET MET A . n A 1 524 ALA 524 524 ? ? ? A . n A 1 525 GLN 525 525 ? ? ? A . n A 1 526 GLN 526 526 ? ? ? A . n A 1 527 ALA 527 527 ? ? ? A . n A 1 528 ALA 528 528 ? ? ? A . n A 1 529 GLN 529 529 ? ? ? A . n A 1 530 GLY 530 530 ? ? ? A . n A 1 531 ALA 531 531 ? ? ? A . n A 1 532 LYS 532 532 ? ? ? A . n A 1 533 LEU 533 533 ? ? ? A . n A 1 534 LEU 534 534 ? ? ? A . n A 1 535 SER 535 535 ? ? ? A . n A 1 536 GLU 536 536 ? ? ? A . n A 1 537 THR 537 537 ? ? ? A . n A 1 538 ASP 538 538 ? ? ? A . n A 1 539 ALA 539 539 ? ? ? A . n A 1 540 GLY 540 540 ? ? ? A . n A 1 541 THR 541 541 ? ? ? A . n A 1 542 GLY 542 542 ? ? ? A . n A 1 543 GLN 543 543 ? ? ? A . n A 1 544 ASN 544 544 ? ? ? A . n A 1 545 GLY 545 545 ? ? ? A . n A 1 546 LEU 546 546 ? ? ? A . n A 1 547 SER 547 547 ? ? ? A . n A 1 548 ALA 548 548 ? ? ? A . n A 1 549 MET 549 549 ? ? ? A . n A 1 550 MET 550 550 ? ? ? A . n A 1 551 GLN 551 551 ? ? ? A . n A 1 552 GLN 552 552 ? ? ? A . n A 1 553 MET 553 553 ? ? ? A . n A 1 554 GLY 554 554 ? ? ? A . n A 1 555 LEU 555 555 ? ? ? A . n A 1 556 ALA 556 556 ? ? ? A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email guy.schoehn@ibs.fr _pdbx_contact_author.name_first Guy _pdbx_contact_author.name_last Schoehn _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-1459-3201 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 27550 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-03-15 2 'Structure model' 1 1 2023-04-05 3 'Structure model' 1 2 2023-05-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_citation_author.identifier_ORCID' 13 3 'Structure model' '_citation.journal_volume' # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version 1.20.1_4487: _software.pdbx_ordinal 1 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8CK0 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8CK0 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.8 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 11395 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source NATURAL _em_entity_assembly.type VIRUS _em_entity_assembly.name 'Bacteriophage sp. Cobetia Marina Virus Carin1' _em_entity_assembly.details 'Cobetia Marina Virus Carin1' _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 8CK0 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode OTHER _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 700 _em_imaging.nominal_defocus_max 4000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 36000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER/RHODIUM _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details 25mA _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_virus_entity.id 1 _em_virus_entity.virus_host_category ? _em_virus_entity.virus_type VIRION _em_virus_entity.virus_isolate OTHER _em_virus_entity.entity_assembly_id 1 _em_virus_entity.enveloped NO _em_virus_entity.empty NO _em_virus_entity.details ? # _em_vitrification.entry_id 8CK0 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 293.15 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8CK0 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8CK0 _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C12 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 SER _pdbx_validate_rmsd_angle.auth_seq_id_1 79 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 80 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CD _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 80 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 115.55 _pdbx_validate_rmsd_angle.angle_target_value 128.40 _pdbx_validate_rmsd_angle.angle_deviation -12.85 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.10 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 35 ? ? -127.69 -55.81 2 1 ARG A 39 ? ? -98.88 -79.14 3 1 ASN A 48 ? ? 72.24 -4.70 4 1 ARG A 52 ? ? 35.59 47.50 5 1 PRO A 80 ? ? -67.84 0.60 6 1 ASP A 90 ? ? -82.85 49.39 7 1 ASN A 91 ? ? -160.06 110.40 8 1 PHE A 316 ? ? -98.37 56.04 9 1 SER A 443 ? ? -59.91 -70.66 10 1 MET A 445 ? ? -175.54 134.98 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A LYS 2 ? A LYS 2 3 1 Y 1 A VAL 3 ? A VAL 3 4 1 Y 1 A ASP 219 ? A ASP 219 5 1 Y 1 A GLU 220 ? A GLU 220 6 1 Y 1 A ARG 221 ? A ARG 221 7 1 Y 1 A ASN 222 ? A ASN 222 8 1 Y 1 A GLU 223 ? A GLU 223 9 1 Y 1 A GLY 224 ? A GLY 224 10 1 Y 1 A LYS 225 ? A LYS 225 11 1 Y 1 A LEU 226 ? A LEU 226 12 1 Y 1 A ASP 227 ? A ASP 227 13 1 Y 1 A SER 228 ? A SER 228 14 1 Y 1 A LYS 229 ? A LYS 229 15 1 Y 1 A ASN 230 ? A ASN 230 16 1 Y 1 A PHE 369 ? A PHE 369 17 1 Y 1 A MET 370 ? A MET 370 18 1 Y 1 A MET 371 ? A MET 371 19 1 Y 1 A ILE 372 ? A ILE 372 20 1 Y 1 A ALA 373 ? A ALA 373 21 1 Y 1 A ASN 374 ? A ASN 374 22 1 Y 1 A ASP 375 ? A ASP 375 23 1 Y 1 A GLN 376 ? A GLN 376 24 1 Y 1 A ARG 377 ? A ARG 377 25 1 Y 1 A SER 378 ? A SER 378 26 1 Y 1 A ASN 379 ? A ASN 379 27 1 Y 1 A ILE 380 ? A ILE 380 28 1 Y 1 A THR 381 ? A THR 381 29 1 Y 1 A ALA 382 ? A ALA 382 30 1 Y 1 A ARG 383 ? A ARG 383 31 1 Y 1 A GLU 384 ? A GLU 384 32 1 Y 1 A ILE 385 ? A ILE 385 33 1 Y 1 A GLN 386 ? A GLN 386 34 1 Y 1 A GLU 387 ? A GLU 387 35 1 Y 1 A ARG 388 ? A ARG 388 36 1 Y 1 A HIS 389 ? A HIS 389 37 1 Y 1 A GLU 390 ? A GLU 390 38 1 Y 1 A GLU 391 ? A GLU 391 39 1 Y 1 A LYS 392 ? A LYS 392 40 1 Y 1 A LEU 393 ? A LEU 393 41 1 Y 1 A LEU 394 ? A LEU 394 42 1 Y 1 A ALA 395 ? A ALA 395 43 1 Y 1 A LEU 396 ? A LEU 396 44 1 Y 1 A GLY 397 ? A GLY 397 45 1 Y 1 A PRO 398 ? A PRO 398 46 1 Y 1 A ALA 524 ? A ALA 524 47 1 Y 1 A GLN 525 ? A GLN 525 48 1 Y 1 A GLN 526 ? A GLN 526 49 1 Y 1 A ALA 527 ? A ALA 527 50 1 Y 1 A ALA 528 ? A ALA 528 51 1 Y 1 A GLN 529 ? A GLN 529 52 1 Y 1 A GLY 530 ? A GLY 530 53 1 Y 1 A ALA 531 ? A ALA 531 54 1 Y 1 A LYS 532 ? A LYS 532 55 1 Y 1 A LEU 533 ? A LEU 533 56 1 Y 1 A LEU 534 ? A LEU 534 57 1 Y 1 A SER 535 ? A SER 535 58 1 Y 1 A GLU 536 ? A GLU 536 59 1 Y 1 A THR 537 ? A THR 537 60 1 Y 1 A ASP 538 ? A ASP 538 61 1 Y 1 A ALA 539 ? A ALA 539 62 1 Y 1 A GLY 540 ? A GLY 540 63 1 Y 1 A THR 541 ? A THR 541 64 1 Y 1 A GLY 542 ? A GLY 542 65 1 Y 1 A GLN 543 ? A GLN 543 66 1 Y 1 A ASN 544 ? A ASN 544 67 1 Y 1 A GLY 545 ? A GLY 545 68 1 Y 1 A LEU 546 ? A LEU 546 69 1 Y 1 A SER 547 ? A SER 547 70 1 Y 1 A ALA 548 ? A ALA 548 71 1 Y 1 A MET 549 ? A MET 549 72 1 Y 1 A MET 550 ? A MET 550 73 1 Y 1 A GLN 551 ? A GLN 551 74 1 Y 1 A GLN 552 ? A GLN 552 75 1 Y 1 A MET 553 ? A MET 553 76 1 Y 1 A GLY 554 ? A GLY 554 77 1 Y 1 A LEU 555 ? A LEU 555 78 1 Y 1 A ALA 556 ? A ALA 556 # _em_buffer_component.buffer_id 1 _em_buffer_component.concentration 1 _em_buffer_component.concentration_units x _em_buffer_component.formula ? _em_buffer_component.id 1 _em_buffer_component.name PBS # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 3801 _em_entity_assembly_naturalsource.organism 'Bacteriophage sp.' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 30 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? RELION ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? RELION ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? RELION 3.1 # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _em_virus_natural_host.entity_assembly_id 1 _em_virus_natural_host.id 1 _em_virus_natural_host.ncbi_tax_id 28258 _em_virus_natural_host.organism 'Cobetia marina' _em_virus_natural_host.strain 'DSM 4741' # _em_virus_shell.diameter 700 _em_virus_shell.entity_assembly_id 1 _em_virus_shell.id 1 _em_virus_shell.name 'Icosahedral capsid' _em_virus_shell.triangulation 7 # _pdbx_audit_support.funding_organization 'Centre National de la Recherche Scientifique (CNRS)' _pdbx_audit_support.country France _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ? #