data_8DND # _entry.id 8DND # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.375 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8DND pdb_00008dnd 10.2210/pdb8dnd/pdb WWPDB D_1000266994 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'Same protein in native form' 2Q2J unspecified PDB 'Homologue protein with same inhibitor' 6PWH unspecified PDB 'Homologue protein with same inhibitor' 7LYE unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8DND _pdbx_database_status.recvd_initial_deposition_date 2022-07-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Salvador, G.H.M.' 1 0000-0001-7459-7637 'Fontes, M.R.M.' 2 0000-0002-4634-6221 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country FR _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biochimie _citation.journal_id_ASTM BICMBE _citation.journal_id_CSD 0466 _citation.journal_id_ISSN 0300-9084 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 207 _citation.language ? _citation.page_first 1 _citation.page_last 10 _citation.title 'Structural basis of the myotoxic inhibition of the Bothrops pirajai PrTX-I by the synthetic varespladib.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.biochi.2022.11.006 _citation.pdbx_database_id_PubMed 36403756 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Salvador, G.H.M.' 1 ? primary 'Pinto, E.K.R.' 2 ? primary 'Ortolani, P.L.' 3 ? primary 'Fortes-Dias, C.L.' 4 ? primary 'Cavalcante, W.L.G.' 5 ? primary 'Soares, A.M.' 6 ? primary 'Lomonte, B.' 7 ? primary 'Lewin, M.R.' 8 ? primary 'Fontes, M.R.M.' 9 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8DND _cell.details ? _cell.formula_units_Z ? _cell.length_a 69.748 _cell.length_a_esd ? _cell.length_b 72.660 _cell.length_b_esd ? _cell.length_c 44.280 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8DND _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Basic phospholipase A2 homolog piratoxin-1' 13754.101 2 ? ? ? ? 2 non-polymer syn '({3-[amino(oxo)acetyl]-1-benzyl-2-ethyl-1H-indol-4-yl}oxy)acetic acid' 380.394 3 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 4 water nat water 18.015 165 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'svPLA2 homolog,Myotoxin SIV-SP5,Piratoxin-I,PrTX-I' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SLFELGKMILQETGKNPAKSYGAYGCNCGVLGRGKPKDATDRCCYVHKCCYKKLTGCNPKKDRYSYSWKDKTIVCGENNP CLKELCECDKAVAICLRENLGTYNKLYRYHLKPFCKKADDC ; _entity_poly.pdbx_seq_one_letter_code_can ;SLFELGKMILQETGKNPAKSYGAYGCNCGVLGRGKPKDATDRCCYVHKCCYKKLTGCNPKKDRYSYSWKDKTIVCGENNP CLKELCECDKAVAICLRENLGTYNKLYRYHLKPFCKKADDC ; _entity_poly.pdbx_strand_id B,A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 LEU n 1 3 PHE n 1 4 GLU n 1 5 LEU n 1 6 GLY n 1 7 LYS n 1 8 MET n 1 9 ILE n 1 10 LEU n 1 11 GLN n 1 12 GLU n 1 13 THR n 1 14 GLY n 1 15 LYS n 1 16 ASN n 1 17 PRO n 1 18 ALA n 1 19 LYS n 1 20 SER n 1 21 TYR n 1 22 GLY n 1 23 ALA n 1 24 TYR n 1 25 GLY n 1 26 CYS n 1 27 ASN n 1 28 CYS n 1 29 GLY n 1 30 VAL n 1 31 LEU n 1 32 GLY n 1 33 ARG n 1 34 GLY n 1 35 LYS n 1 36 PRO n 1 37 LYS n 1 38 ASP n 1 39 ALA n 1 40 THR n 1 41 ASP n 1 42 ARG n 1 43 CYS n 1 44 CYS n 1 45 TYR n 1 46 VAL n 1 47 HIS n 1 48 LYS n 1 49 CYS n 1 50 CYS n 1 51 TYR n 1 52 LYS n 1 53 LYS n 1 54 LEU n 1 55 THR n 1 56 GLY n 1 57 CYS n 1 58 ASN n 1 59 PRO n 1 60 LYS n 1 61 LYS n 1 62 ASP n 1 63 ARG n 1 64 TYR n 1 65 SER n 1 66 TYR n 1 67 SER n 1 68 TRP n 1 69 LYS n 1 70 ASP n 1 71 LYS n 1 72 THR n 1 73 ILE n 1 74 VAL n 1 75 CYS n 1 76 GLY n 1 77 GLU n 1 78 ASN n 1 79 ASN n 1 80 PRO n 1 81 CYS n 1 82 LEU n 1 83 LYS n 1 84 GLU n 1 85 LEU n 1 86 CYS n 1 87 GLU n 1 88 CYS n 1 89 ASP n 1 90 LYS n 1 91 ALA n 1 92 VAL n 1 93 ALA n 1 94 ILE n 1 95 CYS n 1 96 LEU n 1 97 ARG n 1 98 GLU n 1 99 ASN n 1 100 LEU n 1 101 GLY n 1 102 THR n 1 103 TYR n 1 104 ASN n 1 105 LYS n 1 106 LEU n 1 107 TYR n 1 108 ARG n 1 109 TYR n 1 110 HIS n 1 111 LEU n 1 112 LYS n 1 113 PRO n 1 114 PHE n 1 115 CYS n 1 116 LYS n 1 117 LYS n 1 118 ALA n 1 119 ASP n 1 120 ASP n 1 121 CYS n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 121 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Bothrops pirajai' _entity_src_nat.pdbx_ncbi_taxonomy_id 113192 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue 'venom gland' _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PA2H1_BOTPI _struct_ref.pdbx_db_accession P58399 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SLFELGKMILQETGKNPAKSYGAYGCNCGVLGRGKPKDATDRCCYVHKCCYKKLTGCNPKKDRYSYSWKDKTIVCGENNP CLKELCECDKAVAICLRENLGTYNKLYRYHLKPFCKKADDC ; _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8DND B 1 ? 121 ? P58399 1 ? 121 ? 1 133 2 1 8DND A 1 ? 121 ? P58399 1 ? 121 ? 1 133 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 VRD non-polymer . '({3-[amino(oxo)acetyl]-1-benzyl-2-ethyl-1H-indol-4-yl}oxy)acetic acid' Varespladib 'C21 H20 N2 O5' 380.394 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8DND _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.04 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 39.62 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '30% w/v PEG 4000, 0.1 M Tris HCl pH 8.5 and 0.2 M lithium sulfate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details mirrors _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 2M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-05-15 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.425 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'LNLS BEAMLINE W01B-MX2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.425 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline W01B-MX2 _diffrn_source.pdbx_synchrotron_site LNLS # _reflns.B_iso_Wilson_estimate 25.060 _reflns.entry_id 8DND _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.018 _reflns.d_resolution_low 50.320 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 15085 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.900 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.300 _reflns.pdbx_Rmerge_I_obs 0.109 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.600 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.119 _reflns.pdbx_Rpim_I_all 0.047 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? _reflns.pdbx_CC_split_method ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 2.020 2.130 ? ? 13759 ? ? ? 2188 100.000 ? ? ? ? 0.664 ? ? ? ? ? ? ? ? 6.300 ? ? ? 2.600 0.724 0.286 ? 1 1 0.826 ? ? ? ? ? ? ? ? ? ? 6.380 50.320 ? ? 3313 ? ? ? 557 99.700 ? ? ? ? 0.047 ? ? ? ? ? ? ? ? 5.900 ? ? ? 30.000 0.052 0.021 ? 2 1 0.999 ? ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 104.480 _refine.B_iso_mean 31.0594 _refine.B_iso_min 12.440 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8DND _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.0180 _refine.ls_d_res_low 50.3170 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 15050 _refine.ls_number_reflns_R_free 823 _refine.ls_number_reflns_R_work 14227 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.9400 _refine.ls_percent_reflns_R_free 5.4700 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1930 _refine.ls_R_factor_R_free 0.2171 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1916 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.350 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 2q2j _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 21.9100 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2000 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.0180 _refine_hist.d_res_low 50.3170 _refine_hist.number_atoms_solvent 165 _refine_hist.number_atoms_total 2135 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 242 _refine_hist.pdbx_B_iso_mean_ligand 46.71 _refine_hist.pdbx_B_iso_mean_solvent 34.86 _refine_hist.pdbx_number_atoms_protein 1866 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 104 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.0180 2.1444 . . 125 2355 100.0000 . . . 0.2746 0.0000 0.2388 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1444 2.3100 . . 120 2096 88.0000 . . . 0.2686 0.0000 0.2228 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3100 2.5424 . . 151 2376 100.0000 . . . 0.2588 0.0000 0.2084 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5424 2.9103 . . 154 2402 100.0000 . . . 0.2198 0.0000 0.2078 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9103 3.6665 . . 125 2443 100.0000 . . . 0.1909 0.0000 0.1778 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.6665 50.3170 . . 148 2555 100.0000 . . . 0.1944 0.0000 0.1711 . . . . . . . . . . . # _struct.entry_id 8DND _struct.title 'Crystal structure of Bothrops pirajai Piratoxin-I (PrTX-I) and synthetic inhibitor Varespladib (LY315920)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8DND _struct_keywords.text 'PrTX-I, varespladib, Bothrops pirajai, PLA2-like toxin, TOXIN, TOXIN-ANTITOXIN complex' _struct_keywords.pdbx_keywords TOXIN/ANTITOXIN # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 4 ? K N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 1 ? GLY A 14 ? SER B 1 GLY B 15 1 ? 14 HELX_P HELX_P2 AA2 ASN A 16 ? GLY A 22 ? ASN B 17 GLY B 23 1 ? 7 HELX_P HELX_P3 AA3 ASP A 38 ? LYS A 53 ? ASP B 39 LYS B 57 1 ? 16 HELX_P HELX_P4 AA4 ASN A 79 ? ASN A 99 ? ASN B 88 ASN B 109 1 ? 21 HELX_P HELX_P5 AA5 LEU A 100 ? TYR A 103 ? LEU B 110 TYR B 113 5 ? 4 HELX_P HELX_P6 AA6 ASN A 104 ? ARG A 108 ? ASN B 114 ARG B 118 5 ? 5 HELX_P HELX_P7 AA7 LEU A 111 ? CYS A 115 ? LEU B 121 CYS B 126 5 ? 5 HELX_P HELX_P8 AA8 LEU B 2 ? GLY B 14 ? LEU A 2 GLY A 15 1 ? 13 HELX_P HELX_P9 AA9 ASN B 16 ? GLY B 22 ? ASN A 17 GLY A 23 1 ? 7 HELX_P HELX_P10 AB1 ASP B 38 ? LEU B 54 ? ASP A 39 LEU A 58 1 ? 17 HELX_P HELX_P11 AB2 ASN B 79 ? ASN B 99 ? ASN A 88 ASN A 109 1 ? 21 HELX_P HELX_P12 AB3 LEU B 100 ? TYR B 103 ? LEU A 110 TYR A 113 5 ? 4 HELX_P HELX_P13 AB4 ASN B 104 ? ARG B 108 ? ASN A 114 ARG A 118 5 ? 5 HELX_P HELX_P14 AB5 LEU B 111 ? CYS B 115 ? LEU A 121 CYS A 126 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 26 SG ? ? ? 1_555 A CYS 115 SG ? ? B CYS 27 B CYS 126 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf2 disulf ? ? A CYS 28 SG ? ? ? 1_555 A CYS 44 SG ? ? B CYS 29 B CYS 45 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf3 disulf ? ? A CYS 43 SG ? ? ? 1_555 A CYS 95 SG ? ? B CYS 44 B CYS 105 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf4 disulf ? ? A CYS 49 SG ? ? ? 1_555 A CYS 121 SG ? ? B CYS 50 B CYS 133 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf5 disulf ? ? A CYS 50 SG ? ? ? 1_555 A CYS 88 SG ? ? B CYS 51 B CYS 98 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf6 disulf ? ? A CYS 57 SG ? ? ? 1_555 A CYS 81 SG ? ? B CYS 61 B CYS 91 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf7 disulf ? ? A CYS 75 SG ? ? ? 1_555 A CYS 86 SG ? ? B CYS 84 B CYS 96 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf8 disulf ? ? B CYS 26 SG ? ? ? 1_555 B CYS 115 SG ? ? A CYS 27 A CYS 126 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf9 disulf ? ? B CYS 28 SG ? ? ? 1_555 B CYS 44 SG ? ? A CYS 29 A CYS 45 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf10 disulf ? ? B CYS 43 SG ? ? ? 1_555 B CYS 95 SG ? ? A CYS 44 A CYS 105 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf11 disulf ? ? B CYS 49 SG ? ? ? 1_555 B CYS 121 SG ? ? A CYS 50 A CYS 133 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf12 disulf ? ? B CYS 50 SG ? ? ? 1_555 B CYS 88 SG ? ? A CYS 51 A CYS 98 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf13 disulf ? ? B CYS 57 SG ? ? ? 1_555 B CYS 81 SG ? ? A CYS 61 A CYS 91 1_555 ? ? ? ? ? ? ? 2.016 ? ? disulf14 disulf ? ? B CYS 75 SG ? ? ? 1_555 B CYS 86 SG ? ? A CYS 84 A CYS 96 1_555 ? ? ? ? ? ? ? 2.031 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 67 ? TRP A 68 ? SER B 76 TRP B 77 AA1 2 ILE A 73 ? VAL A 74 ? ILE B 82 VAL B 83 AA2 1 TYR B 66 ? LYS B 69 ? TYR A 75 LYS A 78 AA2 2 THR B 72 ? CYS B 75 ? THR A 81 CYS A 84 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N SER A 67 ? N SER B 76 O VAL A 74 ? O VAL B 83 AA2 1 2 N SER B 67 ? N SER A 76 O VAL B 74 ? O VAL A 83 # _atom_sites.entry_id 8DND _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.014337 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013763 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022584 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 1 SER SER B . n A 1 2 LEU 2 2 2 LEU LEU B . n A 1 3 PHE 3 3 3 PHE PHE B . n A 1 4 GLU 4 4 4 GLU GLU B . n A 1 5 LEU 5 5 5 LEU LEU B . n A 1 6 GLY 6 6 6 GLY GLY B . n A 1 7 LYS 7 7 7 LYS LYS B . n A 1 8 MET 8 8 8 MET MET B . n A 1 9 ILE 9 9 9 ILE ILE B . n A 1 10 LEU 10 10 10 LEU LEU B . n A 1 11 GLN 11 11 11 GLN GLN B . n A 1 12 GLU 12 12 12 GLU GLU B . n A 1 13 THR 13 13 13 THR THR B . n A 1 14 GLY 14 15 15 GLY GLY B . n A 1 15 LYS 15 16 16 LYS LYS B . n A 1 16 ASN 16 17 17 ASN ASN B . n A 1 17 PRO 17 18 18 PRO PRO B . n A 1 18 ALA 18 19 19 ALA ALA B . n A 1 19 LYS 19 20 20 LYS LYS B . n A 1 20 SER 20 21 21 SER SER B . n A 1 21 TYR 21 22 22 TYR TYR B . n A 1 22 GLY 22 23 23 GLY GLY B . n A 1 23 ALA 23 24 24 ALA ALA B . n A 1 24 TYR 24 25 25 TYR TYR B . n A 1 25 GLY 25 26 26 GLY GLY B . n A 1 26 CYS 26 27 27 CYS CYS B . n A 1 27 ASN 27 28 28 ASN ASN B . n A 1 28 CYS 28 29 29 CYS CYS B . n A 1 29 GLY 29 30 30 GLY GLY B . n A 1 30 VAL 30 31 31 VAL VAL B . n A 1 31 LEU 31 32 32 LEU LEU B . n A 1 32 GLY 32 33 33 GLY GLY B . n A 1 33 ARG 33 34 34 ARG ARG B . n A 1 34 GLY 34 35 35 GLY GLY B . n A 1 35 LYS 35 36 36 LYS LYS B . n A 1 36 PRO 36 37 37 PRO PRO B . n A 1 37 LYS 37 38 38 LYS LYS B . n A 1 38 ASP 38 39 39 ASP ASP B . n A 1 39 ALA 39 40 40 ALA ALA B . n A 1 40 THR 40 41 41 THR THR B . n A 1 41 ASP 41 42 42 ASP ASP B . n A 1 42 ARG 42 43 43 ARG ARG B . n A 1 43 CYS 43 44 44 CYS CYS B . n A 1 44 CYS 44 45 45 CYS CYS B . n A 1 45 TYR 45 46 46 TYR TYR B . n A 1 46 VAL 46 47 47 VAL VAL B . n A 1 47 HIS 47 48 48 HIS HIS B . n A 1 48 LYS 48 49 49 LYS LYS B . n A 1 49 CYS 49 50 50 CYS CYS B . n A 1 50 CYS 50 51 51 CYS CYS B . n A 1 51 TYR 51 52 52 TYR TYR B . n A 1 52 LYS 52 53 53 LYS LYS B . n A 1 53 LYS 53 57 57 LYS LYS B . n A 1 54 LEU 54 58 58 LEU LEU B . n A 1 55 THR 55 59 59 THR THR B . n A 1 56 GLY 56 60 60 GLY GLY B . n A 1 57 CYS 57 61 61 CYS CYS B . n A 1 58 ASN 58 67 67 ASN ASN B . n A 1 59 PRO 59 68 68 PRO PRO B . n A 1 60 LYS 60 69 69 LYS LYS B . n A 1 61 LYS 61 70 70 LYS LYS B . n A 1 62 ASP 62 71 71 ASP ASP B . n A 1 63 ARG 63 72 72 ARG ARG B . n A 1 64 TYR 64 73 73 TYR TYR B . n A 1 65 SER 65 74 74 SER SER B . n A 1 66 TYR 66 75 75 TYR TYR B . n A 1 67 SER 67 76 76 SER SER B . n A 1 68 TRP 68 77 77 TRP TRP B . n A 1 69 LYS 69 78 78 LYS LYS B . n A 1 70 ASP 70 79 79 ASP ASP B . n A 1 71 LYS 71 80 80 LYS LYS B . n A 1 72 THR 72 81 81 THR THR B . n A 1 73 ILE 73 82 82 ILE ILE B . n A 1 74 VAL 74 83 83 VAL VAL B . n A 1 75 CYS 75 84 84 CYS CYS B . n A 1 76 GLY 76 85 85 GLY GLY B . n A 1 77 GLU 77 86 86 GLU GLU B . n A 1 78 ASN 78 87 87 ASN ASN B . n A 1 79 ASN 79 88 88 ASN ASN B . n A 1 80 PRO 80 90 90 PRO PRO B . n A 1 81 CYS 81 91 91 CYS CYS B . n A 1 82 LEU 82 92 92 LEU LEU B . n A 1 83 LYS 83 93 93 LYS LYS B . n A 1 84 GLU 84 94 94 GLU GLU B . n A 1 85 LEU 85 95 95 LEU LEU B . n A 1 86 CYS 86 96 96 CYS CYS B . n A 1 87 GLU 87 97 97 GLU GLU B . n A 1 88 CYS 88 98 98 CYS CYS B . n A 1 89 ASP 89 99 99 ASP ASP B . n A 1 90 LYS 90 100 100 LYS LYS B . n A 1 91 ALA 91 101 101 ALA ALA B . n A 1 92 VAL 92 102 102 VAL VAL B . n A 1 93 ALA 93 103 103 ALA ALA B . n A 1 94 ILE 94 104 104 ILE ILE B . n A 1 95 CYS 95 105 105 CYS CYS B . n A 1 96 LEU 96 106 106 LEU LEU B . n A 1 97 ARG 97 107 107 ARG ARG B . n A 1 98 GLU 98 108 108 GLU GLU B . n A 1 99 ASN 99 109 109 ASN ASN B . n A 1 100 LEU 100 110 110 LEU LEU B . n A 1 101 GLY 101 111 111 GLY GLY B . n A 1 102 THR 102 112 112 THR THR B . n A 1 103 TYR 103 113 113 TYR TYR B . n A 1 104 ASN 104 114 114 ASN ASN B . n A 1 105 LYS 105 115 115 LYS LYS B . n A 1 106 LEU 106 116 116 LEU LEU B . n A 1 107 TYR 107 117 117 TYR TYR B . n A 1 108 ARG 108 118 118 ARG ARG B . n A 1 109 TYR 109 119 119 TYR TYR B . n A 1 110 HIS 110 120 120 HIS HIS B . n A 1 111 LEU 111 121 121 LEU LEU B . n A 1 112 LYS 112 122 122 LYS LYS B . n A 1 113 PRO 113 123 123 PRO PRO B . n A 1 114 PHE 114 125 125 PHE PHE B . n A 1 115 CYS 115 126 126 CYS CYS B . n A 1 116 LYS 116 127 127 LYS LYS B . n A 1 117 LYS 117 129 129 LYS LYS B . n A 1 118 ALA 118 130 130 ALA ALA B . n A 1 119 ASP 119 131 131 ASP ASP B . n A 1 120 ASP 120 132 132 ASP ASP B . n A 1 121 CYS 121 133 133 CYS CYS B . n B 1 1 SER 1 1 1 SER SER A . n B 1 2 LEU 2 2 2 LEU LEU A . n B 1 3 PHE 3 3 3 PHE PHE A . n B 1 4 GLU 4 4 4 GLU GLU A . n B 1 5 LEU 5 5 5 LEU LEU A . n B 1 6 GLY 6 6 6 GLY GLY A . n B 1 7 LYS 7 7 7 LYS LYS A . n B 1 8 MET 8 8 8 MET MET A . n B 1 9 ILE 9 9 9 ILE ILE A . n B 1 10 LEU 10 10 10 LEU LEU A . n B 1 11 GLN 11 11 11 GLN GLN A . n B 1 12 GLU 12 12 12 GLU GLU A . n B 1 13 THR 13 13 13 THR THR A . n B 1 14 GLY 14 15 15 GLY GLY A . n B 1 15 LYS 15 16 16 LYS LYS A . n B 1 16 ASN 16 17 17 ASN ASN A . n B 1 17 PRO 17 18 18 PRO PRO A . n B 1 18 ALA 18 19 19 ALA ALA A . n B 1 19 LYS 19 20 20 LYS LYS A . n B 1 20 SER 20 21 21 SER SER A . n B 1 21 TYR 21 22 22 TYR TYR A . n B 1 22 GLY 22 23 23 GLY GLY A . n B 1 23 ALA 23 24 24 ALA ALA A . n B 1 24 TYR 24 25 25 TYR TYR A . n B 1 25 GLY 25 26 26 GLY GLY A . n B 1 26 CYS 26 27 27 CYS CYS A . n B 1 27 ASN 27 28 28 ASN ASN A . n B 1 28 CYS 28 29 29 CYS CYS A . n B 1 29 GLY 29 30 30 GLY GLY A . n B 1 30 VAL 30 31 31 VAL VAL A . n B 1 31 LEU 31 32 32 LEU LEU A . n B 1 32 GLY 32 33 33 GLY GLY A . n B 1 33 ARG 33 34 34 ARG ARG A . n B 1 34 GLY 34 35 35 GLY GLY A . n B 1 35 LYS 35 36 36 LYS LYS A . n B 1 36 PRO 36 37 37 PRO PRO A . n B 1 37 LYS 37 38 38 LYS LYS A . n B 1 38 ASP 38 39 39 ASP ASP A . n B 1 39 ALA 39 40 40 ALA ALA A . n B 1 40 THR 40 41 41 THR THR A . n B 1 41 ASP 41 42 42 ASP ASP A . n B 1 42 ARG 42 43 43 ARG ARG A . n B 1 43 CYS 43 44 44 CYS CYS A . n B 1 44 CYS 44 45 45 CYS CYS A . n B 1 45 TYR 45 46 46 TYR TYR A . n B 1 46 VAL 46 47 47 VAL VAL A . n B 1 47 HIS 47 48 48 HIS HIS A . n B 1 48 LYS 48 49 49 LYS LYS A . n B 1 49 CYS 49 50 50 CYS CYS A . n B 1 50 CYS 50 51 51 CYS CYS A . n B 1 51 TYR 51 52 52 TYR TYR A . n B 1 52 LYS 52 53 53 LYS LYS A . n B 1 53 LYS 53 57 57 LYS LYS A . n B 1 54 LEU 54 58 58 LEU LEU A . n B 1 55 THR 55 59 59 THR THR A . n B 1 56 GLY 56 60 60 GLY GLY A . n B 1 57 CYS 57 61 61 CYS CYS A . n B 1 58 ASN 58 67 67 ASN ASN A . n B 1 59 PRO 59 68 68 PRO PRO A . n B 1 60 LYS 60 69 69 LYS LYS A . n B 1 61 LYS 61 70 70 LYS LYS A . n B 1 62 ASP 62 71 71 ASP ASP A . n B 1 63 ARG 63 72 72 ARG ARG A . n B 1 64 TYR 64 73 73 TYR TYR A . n B 1 65 SER 65 74 74 SER SER A . n B 1 66 TYR 66 75 75 TYR TYR A . n B 1 67 SER 67 76 76 SER SER A . n B 1 68 TRP 68 77 77 TRP TRP A . n B 1 69 LYS 69 78 78 LYS LYS A . n B 1 70 ASP 70 79 79 ASP ASP A . n B 1 71 LYS 71 80 80 LYS LYS A . n B 1 72 THR 72 81 81 THR THR A . n B 1 73 ILE 73 82 82 ILE ILE A . n B 1 74 VAL 74 83 83 VAL VAL A . n B 1 75 CYS 75 84 84 CYS CYS A . n B 1 76 GLY 76 85 85 GLY GLY A . n B 1 77 GLU 77 86 86 GLU GLU A . n B 1 78 ASN 78 87 87 ASN ASN A . n B 1 79 ASN 79 88 88 ASN ASN A . n B 1 80 PRO 80 90 90 PRO PRO A . n B 1 81 CYS 81 91 91 CYS CYS A . n B 1 82 LEU 82 92 92 LEU LEU A . n B 1 83 LYS 83 93 93 LYS LYS A . n B 1 84 GLU 84 94 94 GLU GLU A . n B 1 85 LEU 85 95 95 LEU LEU A . n B 1 86 CYS 86 96 96 CYS CYS A . n B 1 87 GLU 87 97 97 GLU GLU A . n B 1 88 CYS 88 98 98 CYS CYS A . n B 1 89 ASP 89 99 99 ASP ASP A . n B 1 90 LYS 90 100 100 LYS LYS A . n B 1 91 ALA 91 101 101 ALA ALA A . n B 1 92 VAL 92 102 102 VAL VAL A . n B 1 93 ALA 93 103 103 ALA ALA A . n B 1 94 ILE 94 104 104 ILE ILE A . n B 1 95 CYS 95 105 105 CYS CYS A . n B 1 96 LEU 96 106 106 LEU LEU A . n B 1 97 ARG 97 107 107 ARG ARG A . n B 1 98 GLU 98 108 108 GLU GLU A . n B 1 99 ASN 99 109 109 ASN ASN A . n B 1 100 LEU 100 110 110 LEU LEU A . n B 1 101 GLY 101 111 111 GLY GLY A . n B 1 102 THR 102 112 112 THR THR A . n B 1 103 TYR 103 113 113 TYR TYR A . n B 1 104 ASN 104 114 114 ASN ASN A . n B 1 105 LYS 105 115 115 LYS LYS A . n B 1 106 LEU 106 116 116 LEU LEU A . n B 1 107 TYR 107 117 117 TYR TYR A . n B 1 108 ARG 108 118 118 ARG ARG A . n B 1 109 TYR 109 119 119 TYR TYR A . n B 1 110 HIS 110 120 120 HIS HIS A . n B 1 111 LEU 111 121 121 LEU LEU A . n B 1 112 LYS 112 122 122 LYS LYS A . n B 1 113 PRO 113 123 123 PRO PRO A . n B 1 114 PHE 114 125 125 PHE PHE A . n B 1 115 CYS 115 126 126 CYS CYS A . n B 1 116 LYS 116 127 127 LYS LYS A . n B 1 117 LYS 117 129 129 LYS LYS A . n B 1 118 ALA 118 130 130 ALA ALA A . n B 1 119 ASP 119 131 131 ASP ASP A . n B 1 120 ASP 120 132 132 ASP ASP A . n B 1 121 CYS 121 133 133 CYS CYS A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email marcos.fontes@unesp.br _pdbx_contact_author.name_first Marcos _pdbx_contact_author.name_last Fontes _pdbx_contact_author.name_mi R.M. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-4634-6221 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 VRD 1 201 2 VRD VRD B . D 2 VRD 1 202 3 VRD VRD B . E 3 SO4 1 203 1 SO4 SO4 B . F 2 VRD 1 201 1 VRD VRD A . G 3 SO4 1 202 2 SO4 SO4 A . H 3 SO4 1 203 3 SO4 SO4 A . I 3 SO4 1 204 4 SO4 SO4 A . J 4 HOH 1 301 134 HOH HOH B . J 4 HOH 2 302 57 HOH HOH B . J 4 HOH 3 303 164 HOH HOH B . J 4 HOH 4 304 80 HOH HOH B . J 4 HOH 5 305 67 HOH HOH B . J 4 HOH 6 306 157 HOH HOH B . J 4 HOH 7 307 16 HOH HOH B . J 4 HOH 8 308 10 HOH HOH B . J 4 HOH 9 309 123 HOH HOH B . J 4 HOH 10 310 13 HOH HOH B . J 4 HOH 11 311 6 HOH HOH B . J 4 HOH 12 312 53 HOH HOH B . J 4 HOH 13 313 63 HOH HOH B . J 4 HOH 14 314 22 HOH HOH B . J 4 HOH 15 315 12 HOH HOH B . J 4 HOH 16 316 118 HOH HOH B . J 4 HOH 17 317 14 HOH HOH B . J 4 HOH 18 318 1 HOH HOH B . J 4 HOH 19 319 121 HOH HOH B . J 4 HOH 20 320 30 HOH HOH B . J 4 HOH 21 321 9 HOH HOH B . J 4 HOH 22 322 141 HOH HOH B . J 4 HOH 23 323 5 HOH HOH B . J 4 HOH 24 324 25 HOH HOH B . J 4 HOH 25 325 52 HOH HOH B . J 4 HOH 26 326 24 HOH HOH B . J 4 HOH 27 327 20 HOH HOH B . J 4 HOH 28 328 26 HOH HOH B . J 4 HOH 29 329 49 HOH HOH B . J 4 HOH 30 330 18 HOH HOH B . J 4 HOH 31 331 91 HOH HOH B . J 4 HOH 32 332 109 HOH HOH B . J 4 HOH 33 333 117 HOH HOH B . J 4 HOH 34 334 31 HOH HOH B . J 4 HOH 35 335 28 HOH HOH B . J 4 HOH 36 336 46 HOH HOH B . J 4 HOH 37 337 17 HOH HOH B . J 4 HOH 38 338 149 HOH HOH B . J 4 HOH 39 339 111 HOH HOH B . J 4 HOH 40 340 38 HOH HOH B . J 4 HOH 41 341 106 HOH HOH B . J 4 HOH 42 342 62 HOH HOH B . J 4 HOH 43 343 95 HOH HOH B . J 4 HOH 44 344 69 HOH HOH B . J 4 HOH 45 345 27 HOH HOH B . J 4 HOH 46 346 126 HOH HOH B . J 4 HOH 47 347 66 HOH HOH B . J 4 HOH 48 348 116 HOH HOH B . J 4 HOH 49 349 139 HOH HOH B . J 4 HOH 50 350 34 HOH HOH B . J 4 HOH 51 351 70 HOH HOH B . J 4 HOH 52 352 90 HOH HOH B . J 4 HOH 53 353 113 HOH HOH B . J 4 HOH 54 354 115 HOH HOH B . J 4 HOH 55 355 68 HOH HOH B . J 4 HOH 56 356 85 HOH HOH B . J 4 HOH 57 357 87 HOH HOH B . J 4 HOH 58 358 42 HOH HOH B . J 4 HOH 59 359 120 HOH HOH B . J 4 HOH 60 360 147 HOH HOH B . J 4 HOH 61 361 89 HOH HOH B . J 4 HOH 62 362 86 HOH HOH B . J 4 HOH 63 363 97 HOH HOH B . J 4 HOH 64 364 84 HOH HOH B . J 4 HOH 65 365 96 HOH HOH B . J 4 HOH 66 366 78 HOH HOH B . J 4 HOH 67 367 61 HOH HOH B . J 4 HOH 68 368 33 HOH HOH B . J 4 HOH 69 369 55 HOH HOH B . J 4 HOH 70 370 36 HOH HOH B . J 4 HOH 71 371 152 HOH HOH B . J 4 HOH 72 372 144 HOH HOH B . J 4 HOH 73 373 100 HOH HOH B . J 4 HOH 74 374 83 HOH HOH B . J 4 HOH 75 375 146 HOH HOH B . J 4 HOH 76 376 153 HOH HOH B . J 4 HOH 77 377 140 HOH HOH B . J 4 HOH 78 378 135 HOH HOH B . J 4 HOH 79 379 130 HOH HOH B . J 4 HOH 80 380 39 HOH HOH B . J 4 HOH 81 381 93 HOH HOH B . J 4 HOH 82 382 161 HOH HOH B . K 4 HOH 1 301 154 HOH HOH A . K 4 HOH 2 302 110 HOH HOH A . K 4 HOH 3 303 143 HOH HOH A . K 4 HOH 4 304 94 HOH HOH A . K 4 HOH 5 305 163 HOH HOH A . K 4 HOH 6 306 11 HOH HOH A . K 4 HOH 7 307 159 HOH HOH A . K 4 HOH 8 308 77 HOH HOH A . K 4 HOH 9 309 4 HOH HOH A . K 4 HOH 10 310 56 HOH HOH A . K 4 HOH 11 311 125 HOH HOH A . K 4 HOH 12 312 35 HOH HOH A . K 4 HOH 13 313 104 HOH HOH A . K 4 HOH 14 314 138 HOH HOH A . K 4 HOH 15 315 7 HOH HOH A . K 4 HOH 16 316 45 HOH HOH A . K 4 HOH 17 317 2 HOH HOH A . K 4 HOH 18 318 15 HOH HOH A . K 4 HOH 19 319 41 HOH HOH A . K 4 HOH 20 320 131 HOH HOH A . K 4 HOH 21 321 73 HOH HOH A . K 4 HOH 22 322 58 HOH HOH A . K 4 HOH 23 323 54 HOH HOH A . K 4 HOH 24 324 47 HOH HOH A . K 4 HOH 25 325 98 HOH HOH A . K 4 HOH 26 326 48 HOH HOH A . K 4 HOH 27 327 64 HOH HOH A . K 4 HOH 28 328 107 HOH HOH A . K 4 HOH 29 329 19 HOH HOH A . K 4 HOH 30 330 32 HOH HOH A . K 4 HOH 31 331 101 HOH HOH A . K 4 HOH 32 332 158 HOH HOH A . K 4 HOH 33 333 37 HOH HOH A . K 4 HOH 34 334 44 HOH HOH A . K 4 HOH 35 335 127 HOH HOH A . K 4 HOH 36 336 8 HOH HOH A . K 4 HOH 37 337 82 HOH HOH A . K 4 HOH 38 338 162 HOH HOH A . K 4 HOH 39 339 3 HOH HOH A . K 4 HOH 40 340 133 HOH HOH A . K 4 HOH 41 341 29 HOH HOH A . K 4 HOH 42 342 148 HOH HOH A . K 4 HOH 43 343 114 HOH HOH A . K 4 HOH 44 344 137 HOH HOH A . K 4 HOH 45 345 102 HOH HOH A . K 4 HOH 46 346 75 HOH HOH A . K 4 HOH 47 347 105 HOH HOH A . K 4 HOH 48 348 23 HOH HOH A . K 4 HOH 49 349 128 HOH HOH A . K 4 HOH 50 350 59 HOH HOH A . K 4 HOH 51 351 119 HOH HOH A . K 4 HOH 52 352 71 HOH HOH A . K 4 HOH 53 353 145 HOH HOH A . K 4 HOH 54 354 50 HOH HOH A . K 4 HOH 55 355 136 HOH HOH A . K 4 HOH 56 356 150 HOH HOH A . K 4 HOH 57 357 99 HOH HOH A . K 4 HOH 58 358 43 HOH HOH A . K 4 HOH 59 359 151 HOH HOH A . K 4 HOH 60 360 103 HOH HOH A . K 4 HOH 61 361 92 HOH HOH A . K 4 HOH 62 362 88 HOH HOH A . K 4 HOH 63 363 124 HOH HOH A . K 4 HOH 64 364 142 HOH HOH A . K 4 HOH 65 365 108 HOH HOH A . K 4 HOH 66 366 129 HOH HOH A . K 4 HOH 67 367 122 HOH HOH A . K 4 HOH 68 368 160 HOH HOH A . K 4 HOH 69 369 132 HOH HOH A . K 4 HOH 70 370 165 HOH HOH A . K 4 HOH 71 371 65 HOH HOH A . K 4 HOH 72 372 21 HOH HOH A . K 4 HOH 73 373 81 HOH HOH A . K 4 HOH 74 374 74 HOH HOH A . K 4 HOH 75 375 79 HOH HOH A . K 4 HOH 76 376 72 HOH HOH A . K 4 HOH 77 377 60 HOH HOH A . K 4 HOH 78 378 156 HOH HOH A . K 4 HOH 79 379 112 HOH HOH A . K 4 HOH 80 380 40 HOH HOH A . K 4 HOH 81 381 76 HOH HOH A . K 4 HOH 82 382 51 HOH HOH A . K 4 HOH 83 383 155 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2230 ? 1 MORE -64 ? 1 'SSA (A^2)' 11750 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 323 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id J _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-08-02 2 'Structure model' 1 1 2023-08-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -29.2189 6.6474 -15.5947 0.1502 ? -0.0088 ? 0.0118 ? 0.2084 ? 0.0228 ? 0.2036 ? 1.1862 ? 0.3488 ? -0.3527 ? 7.4772 ? 2.8694 ? 3.3677 ? -0.0836 ? -0.0288 ? 0.1761 ? 0.0122 ? 0.0278 ? 0.6308 ? -0.1260 ? -0.2184 ? 0.0560 ? 2 'X-RAY DIFFRACTION' ? refined -24.0116 -1.6071 -12.8334 0.2528 ? 0.0057 ? 0.0209 ? 0.1964 ? 0.0150 ? 0.2036 ? 6.6859 ? -0.3488 ? 2.9805 ? 3.2998 ? 1.9530 ? 8.0390 ? 0.1304 ? -0.0895 ? -0.5468 ? 0.7150 ? 0.3284 ? 0.0058 ? 0.3103 ? 0.0638 ? -0.3862 ? 3 'X-RAY DIFFRACTION' ? refined -11.3244 4.1519 -16.2247 0.2481 ? 0.0083 ? -0.0493 ? 0.4204 ? -0.0849 ? 0.4144 ? 3.2536 ? 0.6601 ? 0.1704 ? 5.1917 ? 1.1123 ? 2.8506 ? 0.1533 ? -0.4556 ? 0.4732 ? 0.4223 ? 0.0431 ? -0.9709 ? 0.0743 ? 0.8987 ? -0.1865 ? 4 'X-RAY DIFFRACTION' ? refined -15.3613 9.7187 -21.3608 0.1782 ? -0.0248 ? 0.0036 ? 0.2159 ? -0.0225 ? 0.2704 ? 3.1606 ? -2.3174 ? -0.1628 ? 8.0741 ? -0.5227 ? 2.6803 ? -0.1216 ? 0.0708 ? 0.2975 ? 0.0583 ? 0.1483 ? -0.6671 ? -0.1442 ? 0.4175 ? -0.0011 ? 5 'X-RAY DIFFRACTION' ? refined -30.3525 14.0450 -18.4862 0.2336 ? 0.0249 ? 0.0250 ? 0.1977 ? -0.0170 ? 0.3056 ? 3.4357 ? 2.1941 ? -1.0806 ? 5.2834 ? -0.8383 ? 1.4068 ? 0.0279 ? -0.1581 ? 0.5625 ? 0.0533 ? -0.0266 ? 0.7589 ? -0.4188 ? -0.1622 ? 0.0113 ? 6 'X-RAY DIFFRACTION' ? refined -33.2293 19.8173 -22.2658 0.2175 ? 0.0351 ? 0.0121 ? 0.2684 ? -0.0333 ? 0.5719 ? 0.6361 ? -1.3724 ? -0.5038 ? 4.5424 ? -0.0579 ? 1.2283 ? 0.2031 ? -0.4808 ? 1.3402 ? -0.0197 ? -0.3635 ? 0.2953 ? -0.3591 ? 0.1176 ? 0.2945 ? 7 'X-RAY DIFFRACTION' ? refined -25.4764 11.5593 -23.0764 0.1631 ? -0.0154 ? 0.0277 ? 0.1587 ? -0.0072 ? 0.2148 ? 1.5253 ? -0.2992 ? -0.2084 ? 2.6356 ? -0.0470 ? 1.2827 ? 0.0734 ? 0.0903 ? 0.2178 ? -0.2636 ? -0.1093 ? -0.1693 ? -0.1848 ? -0.1055 ? -0.0158 ? 8 'X-RAY DIFFRACTION' ? refined -16.3518 -6.1610 -19.6950 0.3157 ? 0.0129 ? -0.0242 ? 0.2088 ? -0.0190 ? 0.1862 ? 7.0340 ? -0.4989 ? 1.4979 ? 3.9240 ? -0.5952 ? 5.8655 ? -0.0147 ? -0.3417 ? -0.1710 ? 0.4082 ? -0.1780 ? -0.4071 ? 0.6707 ? 0.4258 ? 0.1548 ? 9 'X-RAY DIFFRACTION' ? refined -9.0000 -1.1073 -10.4839 0.5994 ? 0.2527 ? -0.0737 ? 0.7901 ? 0.1368 ? 0.5206 ? 2.0756 ? 0.3122 ? -0.5496 ? 7.5036 ? 2.6515 ? 1.1480 ? -0.2036 ? -0.4690 ? 0.4274 ? 0.5097 ? 0.4169 ? -1.0683 ? 0.1002 ? 0.0826 ? 0.0030 ? 10 'X-RAY DIFFRACTION' ? refined -4.7004 10.6648 -21.1291 0.2505 ? -0.0423 ? -0.0735 ? 0.5323 ? -0.0782 ? 0.6569 ? 3.5948 ? -0.3330 ? -0.1599 ? 2.0594 ? -0.1238 ? 3.0853 ? 0.1043 ? -0.1808 ? -0.2897 ? 0.0452 ? -0.2253 ? -0.5873 ? -0.3891 ? 0.8078 ? 0.2525 ? 11 'X-RAY DIFFRACTION' ? refined -16.2550 7.3636 2.8167 0.2276 ? -0.0073 ? -0.0266 ? 0.2076 ? 0.0134 ? 0.1894 ? 3.1712 ? 0.4498 ? 0.1891 ? 2.3653 ? 0.5084 ? 2.4297 ? -0.1138 ? 0.2211 ? 0.0774 ? -0.1529 ? -0.0309 ? -0.0201 ? -0.1474 ? 0.1670 ? 0.1008 ? 12 'X-RAY DIFFRACTION' ? refined -8.4716 20.3405 -1.8621 0.6804 ? -0.2018 ? -0.2285 ? 0.4521 ? 0.1935 ? 0.4772 ? 3.7438 ? 0.2109 ? 1.0260 ? 1.5693 ? -1.1389 ? 3.2452 ? -0.7003 ? 0.7114 ? 0.6064 ? -0.2188 ? 0.2069 ? -0.0159 ? -0.9712 ? 0.3477 ? 0.1418 ? 13 'X-RAY DIFFRACTION' ? refined -5.0685 10.8991 7.2616 0.2042 ? -0.0283 ? -0.0217 ? 0.2769 ? 0.0016 ? 0.1960 ? 2.5649 ? 1.9940 ? -0.2630 ? 5.1643 ? -0.7383 ? 1.9761 ? -0.3409 ? 0.1842 ? 0.0206 ? -0.1363 ? 0.2456 ? -0.3806 ? -0.1263 ? 0.5036 ? 0.1045 ? 14 'X-RAY DIFFRACTION' ? refined -26.8448 4.0644 2.7232 0.2001 ? -0.0123 ? 0.0110 ? 0.1657 ? -0.0224 ? 0.1258 ? 4.9276 ? 1.3813 ? 0.4847 ? 1.0931 ? -0.9333 ? 2.9963 ? 0.0272 ? 0.1361 ? 0.1008 ? -0.2497 ? -0.0746 ? 0.4029 ? 0.1119 ? -0.2030 ? 0.1088 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? B 1 ? ? ? B 13 ? ? ;chain 'B' and (resid 1 through 13 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? B 15 ? ? ? B 22 ? ? ;chain 'B' and (resid 15 through 22 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? B 23 ? ? ? B 39 ? ? ;chain 'B' and (resid 23 through 39 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? B 40 ? ? ? B 57 ? ? ;chain 'B' and (resid 40 through 57 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? B 58 ? ? ? B 82 ? ? ;chain 'B' and (resid 58 through 82 ) ; 6 'X-RAY DIFFRACTION' 6 ? ? B 83 ? ? ? B 88 ? ? ;chain 'B' and (resid 83 through 88 ) ; 7 'X-RAY DIFFRACTION' 7 ? ? B 90 ? ? ? B 108 ? ? ;chain 'B' and (resid 90 through 108 ) ; 8 'X-RAY DIFFRACTION' 8 ? ? B 109 ? ? ? B 117 ? ? ;chain 'B' and (resid 109 through 117 ) ; 9 'X-RAY DIFFRACTION' 9 ? ? B 118 ? ? ? B 125 ? ? ;chain 'B' and (resid 118 through 125 ) ; 10 'X-RAY DIFFRACTION' 10 ? ? B 126 ? ? ? B 133 ? ? ;chain 'B' and (resid 126 through 133 ) ; 11 'X-RAY DIFFRACTION' 11 ? ? A 1 ? ? ? A 57 ? ? ;chain 'A' and (resid 1 through 57 ) ; 12 'X-RAY DIFFRACTION' 12 ? ? A 58 ? ? ? A 74 ? ? ;chain 'A' and (resid 58 through 74 ) ; 13 'X-RAY DIFFRACTION' 13 ? ? A 75 ? ? ? A 112 ? ? ;chain 'A' and (resid 75 through 112 ) ; 14 'X-RAY DIFFRACTION' 14 ? ? A 113 ? ? ? A 133 ? ? ;chain 'A' and (resid 113 through 133 ) ; # _pdbx_phasing_MR.entry_id 8DND _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 3.700 _pdbx_phasing_MR.d_res_low_rotation 50.320 _pdbx_phasing_MR.d_res_high_translation 3.700 _pdbx_phasing_MR.d_res_low_translation 50.320 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.13_2998 1 ? 'data reduction' ? ? 'Wolfgang Kabsch' Wolfgang.Kabsch@mpimf-heidelberg.mpg.de ? ? ? ? ? http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/ ? XDS ? ? package . 2 ? 'data scaling' ? ? 'Phil Evans' ? 15/01/18 ? ? ? ? http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html ? Aimless ? ? program 0.6.2 3 ? phasing ? ? 'Randy J. Read' cimr-phaser@lists.cam.ac.uk 'Sat Jul 8 01:26:46 2017 (svn 8200) (git 7250, 5e21953... )' ? ? ? ? http://www-structmed.cimr.cam.ac.uk/phaser/ ? PHASER ? ? program 2.8.0 4 ? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'Oct. 31, 2020' ? ? ? C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.27 5 # _pdbx_entry_details.entry_id 8DND _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 306 ? ? O B HOH 357 ? ? 2.07 2 1 O B HOH 355 ? ? O B HOH 365 ? ? 2.12 3 1 NZ A LYS 127 ? ? O A HOH 301 ? ? 2.13 4 1 N A ASP 131 ? ? O A HOH 302 ? ? 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU B 32 ? ? 99.88 14.64 2 1 ALA A 24 ? ? -149.29 29.06 3 1 LEU A 32 ? ? 73.32 40.26 4 1 LEU A 58 ? ? -65.80 80.43 5 1 CYS A 61 ? ? -159.68 -155.71 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? B HOH 382 ? 5.89 . 2 1 O ? A HOH 383 ? 6.24 . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 B LYS 7 ? NZ ? A LYS 7 NZ 2 1 Y 1 B LYS 36 ? CG ? A LYS 35 CG 3 1 Y 1 B LYS 36 ? CD ? A LYS 35 CD 4 1 Y 1 B LYS 36 ? CE ? A LYS 35 CE 5 1 Y 1 B LYS 36 ? NZ ? A LYS 35 NZ 6 1 Y 1 B LYS 57 ? CG ? A LYS 53 CG 7 1 Y 1 B LYS 57 ? CD ? A LYS 53 CD 8 1 Y 1 B LYS 57 ? CE ? A LYS 53 CE 9 1 Y 1 B LYS 57 ? NZ ? A LYS 53 NZ 10 1 Y 1 B LYS 70 ? CB ? A LYS 61 CB 11 1 Y 1 B LYS 70 ? CG ? A LYS 61 CG 12 1 Y 1 B LYS 70 ? CD ? A LYS 61 CD 13 1 Y 1 B LYS 70 ? CE ? A LYS 61 CE 14 1 Y 1 B LYS 70 ? NZ ? A LYS 61 NZ 15 1 Y 1 B LYS 78 ? NZ ? A LYS 69 NZ 16 1 Y 1 B LEU 116 ? CG ? A LEU 106 CG 17 1 Y 1 B LEU 116 ? CD1 ? A LEU 106 CD1 18 1 Y 1 B LEU 116 ? CD2 ? A LEU 106 CD2 19 1 Y 0 B TYR 119 ? CG ? A TYR 109 CG 20 1 Y 0 B TYR 119 ? OH ? A TYR 109 OH 21 1 Y 0 B PHE 125 ? CZ ? A PHE 114 CZ 22 1 Y 1 B LYS 127 ? CG ? A LYS 116 CG 23 1 Y 1 B LYS 127 ? CD ? A LYS 116 CD 24 1 Y 1 B LYS 127 ? CE ? A LYS 116 CE 25 1 Y 1 B LYS 127 ? NZ ? A LYS 116 NZ 26 1 Y 1 B LYS 129 ? CG ? A LYS 117 CG 27 1 Y 1 B LYS 129 ? CD ? A LYS 117 CD 28 1 Y 1 B LYS 129 ? CE ? A LYS 117 CE 29 1 Y 1 B LYS 129 ? NZ ? A LYS 117 NZ 30 1 Y 0 B ASP 132 ? OD1 ? A ASP 120 OD1 31 1 Y 0 A ARG 43 ? CZ ? B ARG 42 CZ 32 1 Y 1 A LYS 57 ? CG ? B LYS 53 CG 33 1 Y 1 A LYS 57 ? CD ? B LYS 53 CD 34 1 Y 1 A LYS 57 ? CE ? B LYS 53 CE 35 1 Y 1 A LYS 57 ? NZ ? B LYS 53 NZ 36 1 Y 0 A ASN 67 ? CG ? B ASN 58 CG 37 1 Y 0 A ARG 72 ? CZ ? B ARG 63 CZ 38 1 Y 1 A LYS 78 ? CG ? B LYS 69 CG 39 1 Y 1 A LYS 78 ? CD ? B LYS 69 CD 40 1 Y 1 A LYS 78 ? CE ? B LYS 69 CE 41 1 Y 1 A LYS 78 ? NZ ? B LYS 69 NZ 42 1 Y 1 A LEU 116 ? CG ? B LEU 106 CG 43 1 Y 1 A LEU 116 ? CD1 ? B LEU 106 CD1 44 1 Y 1 A LEU 116 ? CD2 ? B LEU 106 CD2 45 1 Y 1 A LYS 129 ? CG ? B LYS 117 CG 46 1 Y 1 A LYS 129 ? CD ? B LYS 117 CD 47 1 Y 1 A LYS 129 ? CE ? B LYS 117 CE 48 1 Y 1 A LYS 129 ? NZ ? B LYS 117 NZ 49 1 Y 0 A ASP 132 ? CG ? B ASP 120 CG # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Sao Paulo Research Foundation (FAPESP)' Brazil 2020/10143-7 1 'Brazilian National Council for Scientific and Technological Development (CNPq)' Brazil ? 2 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id VRD _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id VRD _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '({3-[amino(oxo)acetyl]-1-benzyl-2-ethyl-1H-indol-4-yl}oxy)acetic acid' VRD 3 'SULFATE ION' SO4 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'light scattering' _pdbx_struct_assembly_auth_evidence.details ? #