data_8PIZ # _entry.id 8PIZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8PIZ pdb_00008piz 10.2210/pdb8piz/pdb WWPDB D_1292131425 ? ? EMDB EMD-17695 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8PIZ _pdbx_database_status.recvd_initial_deposition_date 2023-06-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type EMDB . EMD-17384 'other EM volume' EMDB 'Neisseria meningitidis Type IV pilus SB-DATDH variant' EMD-17695 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email guillaume.dumenil@pasteur.fr _pdbx_contact_author.name_first Guillaume _pdbx_contact_author.name_last Dumenil _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-9174-9110 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Fernandez-Martinez, D.' 1 0000-0002-4216-2345 'Dumenil, G.' 2 0000-0001-9174-9110 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 15 _citation.language ? _citation.page_first 2414 _citation.page_last 2414 _citation.title 'Cryo-EM structures of type IV pili complexed with nanobodies reveal immune escape mechanisms.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-024-46677-y _citation.pdbx_database_id_PubMed 38499587 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fernandez-Martinez, D.' 1 ? primary 'Kong, Y.' 2 ? primary 'Goussard, S.' 3 ? primary 'Zavala, A.' 4 0000-0003-1606-3244 primary 'Gastineau, P.' 5 0000-0001-6579-2756 primary 'Rey, M.' 6 0000-0002-7378-1106 primary 'Ayme, G.' 7 0000-0002-0438-8095 primary 'Chamot-Rooke, J.' 8 0000-0002-9427-543X primary 'Lafaye, P.' 9 0000-0002-5761-1342 primary 'Vos, M.' 10 ? primary 'Mechaly, A.' 11 ? primary 'Dumenil, G.' 12 0000-0001-9174-9110 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat Pilin 17067.182 1 ? ? ? ? 2 polymer man 'C24 nanobody' 16288.223 1 ? ? ? ? 3 non-polymer syn SN-GLYCEROL-3-PHOSPHATE 172.074 1 ? ? ? ? 4 non-polymer syn 2,4-bisacetamido-2,4,6-trideoxy-beta-D-glucopyranose 246.260 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGEWPGDNSSAGVATSADIKGKYVQSV TVANGVITAQMASSNVNNEIKSKKLSLWAKRQNGSVKWFCGQPVTRTTATATDVAAANGKTDDKINTKHLPSTCRDDSSA S ; ;FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGEWPGDNSSAGVATSADIKGKYVQSV TVANGVITAQMASSNVNNEIKSKKLSLWAKRQNGSVKWFCGQPVTRTTATATDVAAANGKTDDKINTKHLPSTCRDDSSA S ; A ? 2 'polypeptide(L)' no no ;MAQLQLVESGGGLVQPGGSLRLSCASSGFRSDYYAIVWFRQAPGKEREGVSCISTSGKTTIYADSVKGRFTISRDNAKNT VYLQMNSLKPEDTAVYYCAADFRGSRLSDVCSYSSMDYWGKGTLATVSSEPKTPKPQPAAALEHHHHHH ; ;MAQLQLVESGGGLVQPGGSLRLSCASSGFRSDYYAIVWFRQAPGKEREGVSCISTSGKTTIYADSVKGRFTISRDNAKNT VYLQMNSLKPEDTAVYYCAADFRGSRLSDVCSYSSMDYWGKGTLATVSSEPKTPKPQPAAALEHHHHHH ; B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 SN-GLYCEROL-3-PHOSPHATE G3P 4 2,4-bisacetamido-2,4,6-trideoxy-beta-D-glucopyranose B6D # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PHE n 1 2 THR n 1 3 LEU n 1 4 ILE n 1 5 GLU n 1 6 LEU n 1 7 MET n 1 8 ILE n 1 9 VAL n 1 10 ILE n 1 11 ALA n 1 12 ILE n 1 13 VAL n 1 14 GLY n 1 15 ILE n 1 16 LEU n 1 17 ALA n 1 18 ALA n 1 19 VAL n 1 20 ALA n 1 21 LEU n 1 22 PRO n 1 23 ALA n 1 24 TYR n 1 25 GLN n 1 26 ASP n 1 27 TYR n 1 28 THR n 1 29 ALA n 1 30 ARG n 1 31 ALA n 1 32 GLN n 1 33 VAL n 1 34 SER n 1 35 GLU n 1 36 ALA n 1 37 ILE n 1 38 LEU n 1 39 LEU n 1 40 ALA n 1 41 GLU n 1 42 GLY n 1 43 GLN n 1 44 LYS n 1 45 SER n 1 46 ALA n 1 47 VAL n 1 48 THR n 1 49 GLU n 1 50 TYR n 1 51 TYR n 1 52 LEU n 1 53 ASN n 1 54 HIS n 1 55 GLY n 1 56 GLU n 1 57 TRP n 1 58 PRO n 1 59 GLY n 1 60 ASP n 1 61 ASN n 1 62 SER n 1 63 SER n 1 64 ALA n 1 65 GLY n 1 66 VAL n 1 67 ALA n 1 68 THR n 1 69 SER n 1 70 ALA n 1 71 ASP n 1 72 ILE n 1 73 LYS n 1 74 GLY n 1 75 LYS n 1 76 TYR n 1 77 VAL n 1 78 GLN n 1 79 SER n 1 80 VAL n 1 81 THR n 1 82 VAL n 1 83 ALA n 1 84 ASN n 1 85 GLY n 1 86 VAL n 1 87 ILE n 1 88 THR n 1 89 ALA n 1 90 GLN n 1 91 MET n 1 92 ALA n 1 93 SER n 1 94 SER n 1 95 ASN n 1 96 VAL n 1 97 ASN n 1 98 ASN n 1 99 GLU n 1 100 ILE n 1 101 LYS n 1 102 SER n 1 103 LYS n 1 104 LYS n 1 105 LEU n 1 106 SER n 1 107 LEU n 1 108 TRP n 1 109 ALA n 1 110 LYS n 1 111 ARG n 1 112 GLN n 1 113 ASN n 1 114 GLY n 1 115 SER n 1 116 VAL n 1 117 LYS n 1 118 TRP n 1 119 PHE n 1 120 CYS n 1 121 GLY n 1 122 GLN n 1 123 PRO n 1 124 VAL n 1 125 THR n 1 126 ARG n 1 127 THR n 1 128 THR n 1 129 ALA n 1 130 THR n 1 131 ALA n 1 132 THR n 1 133 ASP n 1 134 VAL n 1 135 ALA n 1 136 ALA n 1 137 ALA n 1 138 ASN n 1 139 GLY n 1 140 LYS n 1 141 THR n 1 142 ASP n 1 143 ASP n 1 144 LYS n 1 145 ILE n 1 146 ASN n 1 147 THR n 1 148 LYS n 1 149 HIS n 1 150 LEU n 1 151 PRO n 1 152 SER n 1 153 THR n 1 154 CYS n 1 155 ARG n 1 156 ASP n 1 157 ASP n 1 158 SER n 1 159 SER n 1 160 ALA n 1 161 SER n 2 1 MET n 2 2 ALA n 2 3 GLN n 2 4 LEU n 2 5 GLN n 2 6 LEU n 2 7 VAL n 2 8 GLU n 2 9 SER n 2 10 GLY n 2 11 GLY n 2 12 GLY n 2 13 LEU n 2 14 VAL n 2 15 GLN n 2 16 PRO n 2 17 GLY n 2 18 GLY n 2 19 SER n 2 20 LEU n 2 21 ARG n 2 22 LEU n 2 23 SER n 2 24 CYS n 2 25 ALA n 2 26 SER n 2 27 SER n 2 28 GLY n 2 29 PHE n 2 30 ARG n 2 31 SER n 2 32 ASP n 2 33 TYR n 2 34 TYR n 2 35 ALA n 2 36 ILE n 2 37 VAL n 2 38 TRP n 2 39 PHE n 2 40 ARG n 2 41 GLN n 2 42 ALA n 2 43 PRO n 2 44 GLY n 2 45 LYS n 2 46 GLU n 2 47 ARG n 2 48 GLU n 2 49 GLY n 2 50 VAL n 2 51 SER n 2 52 CYS n 2 53 ILE n 2 54 SER n 2 55 THR n 2 56 SER n 2 57 GLY n 2 58 LYS n 2 59 THR n 2 60 THR n 2 61 ILE n 2 62 TYR n 2 63 ALA n 2 64 ASP n 2 65 SER n 2 66 VAL n 2 67 LYS n 2 68 GLY n 2 69 ARG n 2 70 PHE n 2 71 THR n 2 72 ILE n 2 73 SER n 2 74 ARG n 2 75 ASP n 2 76 ASN n 2 77 ALA n 2 78 LYS n 2 79 ASN n 2 80 THR n 2 81 VAL n 2 82 TYR n 2 83 LEU n 2 84 GLN n 2 85 MET n 2 86 ASN n 2 87 SER n 2 88 LEU n 2 89 LYS n 2 90 PRO n 2 91 GLU n 2 92 ASP n 2 93 THR n 2 94 ALA n 2 95 VAL n 2 96 TYR n 2 97 TYR n 2 98 CYS n 2 99 ALA n 2 100 ALA n 2 101 ASP n 2 102 PHE n 2 103 ARG n 2 104 GLY n 2 105 SER n 2 106 ARG n 2 107 LEU n 2 108 SER n 2 109 ASP n 2 110 VAL n 2 111 CYS n 2 112 SER n 2 113 TYR n 2 114 SER n 2 115 SER n 2 116 MET n 2 117 ASP n 2 118 TYR n 2 119 TRP n 2 120 GLY n 2 121 LYS n 2 122 GLY n 2 123 THR n 2 124 LEU n 2 125 ALA n 2 126 THR n 2 127 VAL n 2 128 SER n 2 129 SER n 2 130 GLU n 2 131 PRO n 2 132 LYS n 2 133 THR n 2 134 PRO n 2 135 LYS n 2 136 PRO n 2 137 GLN n 2 138 PRO n 2 139 ALA n 2 140 ALA n 2 141 ALA n 2 142 LEU n 2 143 GLU n 2 144 HIS n 2 145 HIS n 2 146 HIS n 2 147 HIS n 2 148 HIS n 2 149 HIS n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 149 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vicugna pacos' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 30538 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ;Escherichia coli 'BL21-Gold(DE3)pLysS AG' ; _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 866768 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 161 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Neisseria meningitidis 8013' _entity_src_nat.pdbx_ncbi_taxonomy_id 604162 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 B6D 'D-saccharide, beta linking' . 2,4-bisacetamido-2,4,6-trideoxy-beta-D-glucopyranose ;2,4-bis(acetylamino)-2,4,6-trideoxy-beta-D-glucopyranose; 2,4-diacetamido-2,4,6-trideoxy-beta-D-glucopyranose; bacillosamine; 2,4-bisacetamido-2,4,6-trideoxy-beta-D-glucose; 2,4-bisacetamido-2,4,6-trideoxy-D-glucose; 2,4-bisacetamido-2,4,6-trideoxy-glucose ; 'C10 H18 N2 O5' 246.260 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G3P non-polymer . SN-GLYCEROL-3-PHOSPHATE ? 'C3 H9 O6 P' 172.074 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _pdbx_chem_comp_identifier.comp_id B6D _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1.0 _pdbx_chem_comp_identifier.identifier b-D-6-deoxy-GlcpNAc4NAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PHE 1 1 1 PHE PHE A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 MET 7 7 7 MET MET A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 PRO 22 22 22 PRO PRO A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 GLN 25 25 25 GLN GLN A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 TYR 27 27 27 TYR TYR A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 GLN 32 32 32 GLN GLN A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 GLN 43 43 43 GLN GLN A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 THR 48 48 48 THR THR A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 TYR 50 50 50 TYR TYR A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 HIS 54 54 54 HIS HIS A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 TRP 57 57 57 TRP TRP A . n A 1 58 PRO 58 58 58 PRO PRO A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 TYR 76 76 76 TYR TYR A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLN 78 78 78 GLN GLN A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 ASN 84 84 84 ASN ASN A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 ILE 87 87 87 ILE ILE A . n A 1 88 THR 88 88 88 THR THR A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 MET 91 91 91 MET MET A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 ASN 97 97 97 ASN ASN A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 GLU 99 99 99 GLU GLU A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 LYS 103 103 103 LYS LYS A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 TRP 108 108 108 TRP TRP A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 ARG 111 111 111 ARG ARG A . n A 1 112 GLN 112 112 112 GLN GLN A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 GLY 114 114 114 GLY GLY A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 TRP 118 118 118 TRP TRP A . n A 1 119 PHE 119 119 119 PHE PHE A . n A 1 120 CYS 120 120 120 CYS CYS A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 GLN 122 122 122 GLN GLN A . n A 1 123 PRO 123 123 123 PRO PRO A . n A 1 124 VAL 124 124 124 VAL VAL A . n A 1 125 THR 125 125 125 THR THR A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 THR 127 127 127 THR THR A . n A 1 128 THR 128 128 128 THR THR A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 THR 130 130 130 THR THR A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 THR 132 132 132 THR THR A . n A 1 133 ASP 133 133 133 ASP ASP A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 ALA 135 135 135 ALA ALA A . n A 1 136 ALA 136 136 136 ALA ALA A . n A 1 137 ALA 137 137 137 ALA ALA A . n A 1 138 ASN 138 138 138 ASN ASN A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 LYS 140 140 140 LYS LYS A . n A 1 141 THR 141 141 141 THR THR A . n A 1 142 ASP 142 142 142 ASP ASP A . n A 1 143 ASP 143 143 143 ASP ASP A . n A 1 144 LYS 144 144 144 LYS LYS A . n A 1 145 ILE 145 145 145 ILE ILE A . n A 1 146 ASN 146 146 146 ASN ASN A . n A 1 147 THR 147 147 147 THR THR A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 HIS 149 149 149 HIS HIS A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 PRO 151 151 151 PRO PRO A . n A 1 152 SER 152 152 152 SER SER A . n A 1 153 THR 153 153 153 THR THR A . n A 1 154 CYS 154 154 154 CYS CYS A . n A 1 155 ARG 155 155 155 ARG ARG A . n A 1 156 ASP 156 156 156 ASP ASP A . n A 1 157 ASP 157 157 157 ASP ASP A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 SER 159 159 159 SER SER A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 SER 161 161 161 SER SER A . n B 2 1 MET 1 1 ? ? ? B . n B 2 2 ALA 2 2 2 ALA ALA B . n B 2 3 GLN 3 3 3 GLN GLN B . n B 2 4 LEU 4 4 4 LEU LEU B . n B 2 5 GLN 5 5 5 GLN GLN B . n B 2 6 LEU 6 6 6 LEU LEU B . n B 2 7 VAL 7 7 7 VAL VAL B . n B 2 8 GLU 8 8 8 GLU GLU B . n B 2 9 SER 9 9 9 SER SER B . n B 2 10 GLY 10 10 10 GLY GLY B . n B 2 11 GLY 11 11 11 GLY GLY B . n B 2 12 GLY 12 12 12 GLY GLY B . n B 2 13 LEU 13 13 13 LEU LEU B . n B 2 14 VAL 14 14 14 VAL VAL B . n B 2 15 GLN 15 15 15 GLN GLN B . n B 2 16 PRO 16 16 16 PRO PRO B . n B 2 17 GLY 17 17 17 GLY GLY B . n B 2 18 GLY 18 18 18 GLY GLY B . n B 2 19 SER 19 19 19 SER SER B . n B 2 20 LEU 20 20 20 LEU LEU B . n B 2 21 ARG 21 21 21 ARG ARG B . n B 2 22 LEU 22 22 22 LEU LEU B . n B 2 23 SER 23 23 23 SER SER B . n B 2 24 CYS 24 24 24 CYS CYS B . n B 2 25 ALA 25 25 25 ALA ALA B . n B 2 26 SER 26 26 26 SER SER B . n B 2 27 SER 27 27 27 SER SER B . n B 2 28 GLY 28 28 28 GLY GLY B . n B 2 29 PHE 29 29 29 PHE PHE B . n B 2 30 ARG 30 30 30 ARG ARG B . n B 2 31 SER 31 31 31 SER SER B . n B 2 32 ASP 32 32 32 ASP ASP B . n B 2 33 TYR 33 33 33 TYR TYR B . n B 2 34 TYR 34 34 34 TYR TYR B . n B 2 35 ALA 35 35 35 ALA ALA B . n B 2 36 ILE 36 36 36 ILE ILE B . n B 2 37 VAL 37 37 37 VAL VAL B . n B 2 38 TRP 38 38 38 TRP TRP B . n B 2 39 PHE 39 39 39 PHE PHE B . n B 2 40 ARG 40 40 40 ARG ARG B . n B 2 41 GLN 41 41 41 GLN GLN B . n B 2 42 ALA 42 42 42 ALA ALA B . n B 2 43 PRO 43 43 43 PRO PRO B . n B 2 44 GLY 44 44 44 GLY GLY B . n B 2 45 LYS 45 45 45 LYS LYS B . n B 2 46 GLU 46 46 46 GLU GLU B . n B 2 47 ARG 47 47 47 ARG ARG B . n B 2 48 GLU 48 48 48 GLU GLU B . n B 2 49 GLY 49 49 49 GLY GLY B . n B 2 50 VAL 50 50 50 VAL VAL B . n B 2 51 SER 51 51 51 SER SER B . n B 2 52 CYS 52 52 52 CYS CYS B . n B 2 53 ILE 53 53 53 ILE ILE B . n B 2 54 SER 54 54 54 SER SER B . n B 2 55 THR 55 55 55 THR THR B . n B 2 56 SER 56 56 56 SER SER B . n B 2 57 GLY 57 57 57 GLY GLY B . n B 2 58 LYS 58 58 58 LYS LYS B . n B 2 59 THR 59 59 59 THR THR B . n B 2 60 THR 60 60 60 THR THR B . n B 2 61 ILE 61 61 61 ILE ILE B . n B 2 62 TYR 62 62 62 TYR TYR B . n B 2 63 ALA 63 63 63 ALA ALA B . n B 2 64 ASP 64 64 64 ASP ASP B . n B 2 65 SER 65 65 65 SER SER B . n B 2 66 VAL 66 66 66 VAL VAL B . n B 2 67 LYS 67 67 67 LYS LYS B . n B 2 68 GLY 68 68 68 GLY GLY B . n B 2 69 ARG 69 69 69 ARG ARG B . n B 2 70 PHE 70 70 70 PHE PHE B . n B 2 71 THR 71 71 71 THR THR B . n B 2 72 ILE 72 72 72 ILE ILE B . n B 2 73 SER 73 73 73 SER SER B . n B 2 74 ARG 74 74 74 ARG ARG B . n B 2 75 ASP 75 75 75 ASP ASP B . n B 2 76 ASN 76 76 76 ASN ASN B . n B 2 77 ALA 77 77 77 ALA ALA B . n B 2 78 LYS 78 78 78 LYS LYS B . n B 2 79 ASN 79 79 79 ASN ASN B . n B 2 80 THR 80 80 80 THR THR B . n B 2 81 VAL 81 81 81 VAL VAL B . n B 2 82 TYR 82 82 82 TYR TYR B . n B 2 83 LEU 83 83 83 LEU LEU B . n B 2 84 GLN 84 84 84 GLN GLN B . n B 2 85 MET 85 85 85 MET MET B . n B 2 86 ASN 86 86 86 ASN ASN B . n B 2 87 SER 87 87 87 SER SER B . n B 2 88 LEU 88 88 88 LEU LEU B . n B 2 89 LYS 89 89 89 LYS LYS B . n B 2 90 PRO 90 90 90 PRO PRO B . n B 2 91 GLU 91 91 91 GLU GLU B . n B 2 92 ASP 92 92 92 ASP ASP B . n B 2 93 THR 93 93 93 THR THR B . n B 2 94 ALA 94 94 94 ALA ALA B . n B 2 95 VAL 95 95 95 VAL VAL B . n B 2 96 TYR 96 96 96 TYR TYR B . n B 2 97 TYR 97 97 97 TYR TYR B . n B 2 98 CYS 98 98 98 CYS CYS B . n B 2 99 ALA 99 99 99 ALA ALA B . n B 2 100 ALA 100 100 100 ALA ALA B . n B 2 101 ASP 101 101 101 ASP ASP B . n B 2 102 PHE 102 102 102 PHE PHE B . n B 2 103 ARG 103 103 103 ARG ARG B . n B 2 104 GLY 104 104 104 GLY GLY B . n B 2 105 SER 105 105 105 SER SER B . n B 2 106 ARG 106 106 106 ARG ARG B . n B 2 107 LEU 107 107 107 LEU LEU B . n B 2 108 SER 108 108 108 SER SER B . n B 2 109 ASP 109 109 109 ASP ASP B . n B 2 110 VAL 110 110 110 VAL VAL B . n B 2 111 CYS 111 111 111 CYS CYS B . n B 2 112 SER 112 112 112 SER SER B . n B 2 113 TYR 113 113 113 TYR TYR B . n B 2 114 SER 114 114 114 SER SER B . n B 2 115 SER 115 115 115 SER SER B . n B 2 116 MET 116 116 116 MET MET B . n B 2 117 ASP 117 117 117 ASP ASP B . n B 2 118 TYR 118 118 118 TYR TYR B . n B 2 119 TRP 119 119 119 TRP TRP B . n B 2 120 GLY 120 120 120 GLY GLY B . n B 2 121 LYS 121 121 121 LYS LYS B . n B 2 122 GLY 122 122 122 GLY GLY B . n B 2 123 THR 123 123 123 THR THR B . n B 2 124 LEU 124 124 124 LEU LEU B . n B 2 125 ALA 125 125 125 ALA ALA B . n B 2 126 THR 126 126 126 THR THR B . n B 2 127 VAL 127 127 127 VAL VAL B . n B 2 128 SER 128 128 128 SER SER B . n B 2 129 SER 129 129 ? ? ? B . n B 2 130 GLU 130 130 ? ? ? B . n B 2 131 PRO 131 131 ? ? ? B . n B 2 132 LYS 132 132 ? ? ? B . n B 2 133 THR 133 133 ? ? ? B . n B 2 134 PRO 134 134 ? ? ? B . n B 2 135 LYS 135 135 ? ? ? B . n B 2 136 PRO 136 136 ? ? ? B . n B 2 137 GLN 137 137 ? ? ? B . n B 2 138 PRO 138 138 ? ? ? B . n B 2 139 ALA 139 139 ? ? ? B . n B 2 140 ALA 140 140 ? ? ? B . n B 2 141 ALA 141 141 ? ? ? B . n B 2 142 LEU 142 142 ? ? ? B . n B 2 143 GLU 143 143 ? ? ? B . n B 2 144 HIS 144 144 ? ? ? B . n B 2 145 HIS 145 145 ? ? ? B . n B 2 146 HIS 146 146 ? ? ? B . n B 2 147 HIS 147 147 ? ? ? B . n B 2 148 HIS 148 148 ? ? ? B . n B 2 149 HIS 149 149 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 G3P 1 201 162 G3P G3P A . D 4 B6D 1 202 163 B6D DAT A . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8PIZ _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8PIZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8PIZ _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 51.34 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8PIZ _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high . _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.0018 ? 2223 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.4444 ? 3015 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.0384 ? 348 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.0028 ? 383 ? f_plane_restr ? ? 'ELECTRON MICROSCOPY' ? 3.5694 ? 326 ? f_dihedral_angle_d ? ? # _struct.entry_id 8PIZ _struct.title 'Neisseria meningitidis Type IV pilus SB-DATDH variant bound to the C24 nanobody' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8PIZ _struct_keywords.text 'Pilin, Extracellular, Adhesion, Aggregation, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP A0A1I9GEU1_NEIME A0A1I9GEU1 ? 1 ;FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGEWPGDNSSAGVATSADIKGKYVQSV TVANGVITAQMASSNVNNEIKSKKLSLWAKRQNGSVKWFCGQPVTRTTATATDVAAANGKTDDKINTKHLPSTCRDDSSA S ; 1 2 PDB 8PIZ 8PIZ ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8PIZ A 1 ? 161 ? A0A1I9GEU1 1 ? 161 ? 1 161 2 2 8PIZ B 1 ? 149 ? 8PIZ 1 ? 149 ? 1 149 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 2 ? ALA A 18 ? THR A 2 ALA A 18 1 ? 17 HELX_P HELX_P2 AA2 ALA A 23 ? GLN A 43 ? ALA A 23 GLN A 43 1 ? 21 HELX_P HELX_P3 AA3 GLN A 43 ? GLY A 55 ? GLN A 43 GLY A 55 1 ? 13 HELX_P HELX_P4 AA4 ASP A 60 ? GLY A 65 ? ASP A 60 GLY A 65 1 ? 6 HELX_P HELX_P5 AA5 THR A 68 ? ILE A 72 ? THR A 68 ILE A 72 5 ? 5 HELX_P HELX_P6 AA6 ASN A 97 ? LYS A 101 ? ASN A 97 LYS A 101 5 ? 5 HELX_P HELX_P7 AA7 ASN A 146 ? LEU A 150 ? ASN A 146 LEU A 150 5 ? 5 HELX_P HELX_P8 AA8 ARG B 30 ? ASP B 32 ? ARG B 30 ASP B 32 5 ? 3 HELX_P HELX_P9 AA9 LYS B 89 ? THR B 93 ? LYS B 89 THR B 93 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 120 SG ? ? ? 1_555 A CYS 154 SG ? ? A CYS 120 A CYS 154 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf2 disulf ? ? B CYS 24 SG ? ? ? 1_555 B CYS 98 SG ? ? B CYS 24 B CYS 98 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? B CYS 52 SG ? ? ? 1_555 B CYS 111 SG ? ? B CYS 52 B CYS 111 1_555 ? ? ? ? ? ? ? 2.029 ? ? covale1 covale one ? A SER 63 OG ? ? ? 1_555 D B6D . C1 ? ? A SER 63 A B6D 202 1_555 ? ? ? ? ? ? ? 1.437 ? O-Glycosylation covale2 covale none ? A SER 69 CB ? ? ? 1_555 C G3P . O4P ? ? A SER 69 A G3P 201 1_555 ? ? ? ? ? ? ? 1.400 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? AA3 ? 4 ? AA4 ? 6 ? AA5 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel AA4 5 6 ? anti-parallel AA5 1 2 ? parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 77 ? ALA A 83 ? VAL A 77 ALA A 83 AA1 2 VAL A 86 ? MET A 91 ? VAL A 86 MET A 91 AA1 3 LYS A 104 ? ARG A 111 ? LYS A 104 ARG A 111 AA1 4 VAL A 116 ? GLY A 121 ? VAL A 116 GLY A 121 AA2 1 VAL A 124 ? THR A 125 ? VAL A 124 THR A 125 AA2 2 ALA A 135 ? ALA A 136 ? ALA A 135 ALA A 136 AA3 1 LEU B 4 ? SER B 9 ? LEU B 4 SER B 9 AA3 2 SER B 19 ? GLY B 28 ? SER B 19 GLY B 28 AA3 3 THR B 80 ? ASN B 86 ? THR B 80 ASN B 86 AA3 4 PHE B 70 ? ASP B 75 ? PHE B 70 ASP B 75 AA4 1 LEU B 13 ? VAL B 14 ? LEU B 13 VAL B 14 AA4 2 THR B 123 ? VAL B 127 ? THR B 123 VAL B 127 AA4 3 ALA B 94 ? PHE B 102 ? ALA B 94 PHE B 102 AA4 4 TYR B 34 ? GLN B 41 ? TYR B 34 GLN B 41 AA4 5 GLU B 48 ? ILE B 53 ? GLU B 48 ILE B 53 AA4 6 THR B 60 ? TYR B 62 ? THR B 60 TYR B 62 AA5 1 LEU B 13 ? VAL B 14 ? LEU B 13 VAL B 14 AA5 2 THR B 123 ? VAL B 127 ? THR B 123 VAL B 127 AA5 3 ALA B 94 ? PHE B 102 ? ALA B 94 PHE B 102 AA5 4 TYR B 118 ? TRP B 119 ? TYR B 118 TRP B 119 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 81 ? N THR A 81 O THR A 88 ? O THR A 88 AA1 2 3 N ILE A 87 ? N ILE A 87 O LEU A 107 ? O LEU A 107 AA1 3 4 N TRP A 108 ? N TRP A 108 O PHE A 119 ? O PHE A 119 AA2 1 2 N THR A 125 ? N THR A 125 O ALA A 135 ? O ALA A 135 AA3 1 2 N GLN B 5 ? N GLN B 5 O SER B 27 ? O SER B 27 AA3 2 3 N CYS B 24 ? N CYS B 24 O VAL B 81 ? O VAL B 81 AA3 3 4 O GLN B 84 ? O GLN B 84 N THR B 71 ? N THR B 71 AA4 1 2 N VAL B 14 ? N VAL B 14 O THR B 126 ? O THR B 126 AA4 2 3 O THR B 123 ? O THR B 123 N TYR B 96 ? N TYR B 96 AA4 3 4 O TYR B 97 ? O TYR B 97 N PHE B 39 ? N PHE B 39 AA4 4 5 N ARG B 40 ? N ARG B 40 O GLU B 48 ? O GLU B 48 AA4 5 6 N CYS B 52 ? N CYS B 52 O ILE B 61 ? O ILE B 61 AA5 1 2 N VAL B 14 ? N VAL B 14 O THR B 126 ? O THR B 126 AA5 2 3 O THR B 123 ? O THR B 123 N TYR B 96 ? N TYR B 96 AA5 3 4 N ALA B 100 ? N ALA B 100 O TYR B 118 ? O TYR B 118 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 18 ? ? -96.31 30.97 2 1 LYS A 140 ? ? 48.12 -118.34 3 1 ALA B 94 ? ? -161.91 -169.39 # _space_group_symop.id 1 _space_group_symop.operation_xyz x,y,z # _pdbx_entry_details.entry_id 8PIZ _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8PIZ _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol 'FLEXIBLE FIT' # _em_3d_reconstruction.entry_id 8PIZ _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.75 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 249060 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type HELICAL # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.4 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source NATURAL _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Neisseria meningitidis PilE, SB-DATDH variant, bound to the C24 nanobody' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2' # _em_imaging.entry_id 8PIZ _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 600 _em_imaging.nominal_defocus_max 3000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 8PIZ _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8PIZ _em_experiment.id 1 _em_experiment.reconstruction_method HELICAL _em_experiment.aggregation_state FILAMENT _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B MET 1 ? B MET 1 2 1 Y 1 B SER 129 ? B SER 129 3 1 Y 1 B GLU 130 ? B GLU 130 4 1 Y 1 B PRO 131 ? B PRO 131 5 1 Y 1 B LYS 132 ? B LYS 132 6 1 Y 1 B THR 133 ? B THR 133 7 1 Y 1 B PRO 134 ? B PRO 134 8 1 Y 1 B LYS 135 ? B LYS 135 9 1 Y 1 B PRO 136 ? B PRO 136 10 1 Y 1 B GLN 137 ? B GLN 137 11 1 Y 1 B PRO 138 ? B PRO 138 12 1 Y 1 B ALA 139 ? B ALA 139 13 1 Y 1 B ALA 140 ? B ALA 140 14 1 Y 1 B ALA 141 ? B ALA 141 15 1 Y 1 B LEU 142 ? B LEU 142 16 1 Y 1 B GLU 143 ? B GLU 143 17 1 Y 1 B HIS 144 ? B HIS 144 18 1 Y 1 B HIS 145 ? B HIS 145 19 1 Y 1 B HIS 146 ? B HIS 146 20 1 Y 1 B HIS 147 ? B HIS 147 21 1 Y 1 B HIS 148 ? B HIS 148 22 1 Y 1 B HIS 149 ? B HIS 149 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 B6D C1 C N R 74 B6D N2 N N N 75 B6D C3 C N S 76 B6D C4 C N S 77 B6D C5 C N R 78 B6D C6 C N N 79 B6D C7 C N N 80 B6D C8 C N N 81 B6D C9 C N N 82 B6D C2 C N R 83 B6D O7 O N N 84 B6D N4 N N N 85 B6D C10 C N N 86 B6D O10 O N N 87 B6D O5 O N N 88 B6D O3 O N N 89 B6D H2 H N N 90 B6D H1 H N N 91 B6D H3 H N N 92 B6D HN2 H N N 93 B6D H5 H N N 94 B6D H81 H N N 95 B6D H83 H N N 96 B6D H82 H N N 97 B6D H4 H N N 98 B6D HN4 H N N 99 B6D H9 H N N 100 B6D H9A H N N 101 B6D H9B H N N 102 B6D H62 H N N 103 B6D H6A H N N 104 B6D H61 H N N 105 B6D O1 O N N 106 B6D HO3 H N N 107 B6D HO1 H N N 108 CYS N N N N 109 CYS CA C N R 110 CYS C C N N 111 CYS O O N N 112 CYS CB C N N 113 CYS SG S N N 114 CYS OXT O N N 115 CYS H H N N 116 CYS H2 H N N 117 CYS HA H N N 118 CYS HB2 H N N 119 CYS HB3 H N N 120 CYS HG H N N 121 CYS HXT H N N 122 G3P O1 O N N 123 G3P C1 C N N 124 G3P C2 C N R 125 G3P O2 O N N 126 G3P C3 C N N 127 G3P O1P O N N 128 G3P O4P O N N 129 G3P O2P O N N 130 G3P O3P O N N 131 G3P P P N N 132 G3P HO1 H N N 133 G3P H11 H N N 134 G3P H12 H N N 135 G3P H2 H N N 136 G3P HO2 H N N 137 G3P H31 H N N 138 G3P H32 H N N 139 G3P HOP3 H N N 140 G3P HOP4 H N N 141 GLN N N N N 142 GLN CA C N S 143 GLN C C N N 144 GLN O O N N 145 GLN CB C N N 146 GLN CG C N N 147 GLN CD C N N 148 GLN OE1 O N N 149 GLN NE2 N N N 150 GLN OXT O N N 151 GLN H H N N 152 GLN H2 H N N 153 GLN HA H N N 154 GLN HB2 H N N 155 GLN HB3 H N N 156 GLN HG2 H N N 157 GLN HG3 H N N 158 GLN HE21 H N N 159 GLN HE22 H N N 160 GLN HXT H N N 161 GLU N N N N 162 GLU CA C N S 163 GLU C C N N 164 GLU O O N N 165 GLU CB C N N 166 GLU CG C N N 167 GLU CD C N N 168 GLU OE1 O N N 169 GLU OE2 O N N 170 GLU OXT O N N 171 GLU H H N N 172 GLU H2 H N N 173 GLU HA H N N 174 GLU HB2 H N N 175 GLU HB3 H N N 176 GLU HG2 H N N 177 GLU HG3 H N N 178 GLU HE2 H N N 179 GLU HXT H N N 180 GLY N N N N 181 GLY CA C N N 182 GLY C C N N 183 GLY O O N N 184 GLY OXT O N N 185 GLY H H N N 186 GLY H2 H N N 187 GLY HA2 H N N 188 GLY HA3 H N N 189 GLY HXT H N N 190 HIS N N N N 191 HIS CA C N S 192 HIS C C N N 193 HIS O O N N 194 HIS CB C N N 195 HIS CG C Y N 196 HIS ND1 N Y N 197 HIS CD2 C Y N 198 HIS CE1 C Y N 199 HIS NE2 N Y N 200 HIS OXT O N N 201 HIS H H N N 202 HIS H2 H N N 203 HIS HA H N N 204 HIS HB2 H N N 205 HIS HB3 H N N 206 HIS HD1 H N N 207 HIS HD2 H N N 208 HIS HE1 H N N 209 HIS HE2 H N N 210 HIS HXT H N N 211 ILE N N N N 212 ILE CA C N S 213 ILE C C N N 214 ILE O O N N 215 ILE CB C N S 216 ILE CG1 C N N 217 ILE CG2 C N N 218 ILE CD1 C N N 219 ILE OXT O N N 220 ILE H H N N 221 ILE H2 H N N 222 ILE HA H N N 223 ILE HB H N N 224 ILE HG12 H N N 225 ILE HG13 H N N 226 ILE HG21 H N N 227 ILE HG22 H N N 228 ILE HG23 H N N 229 ILE HD11 H N N 230 ILE HD12 H N N 231 ILE HD13 H N N 232 ILE HXT H N N 233 LEU N N N N 234 LEU CA C N S 235 LEU C C N N 236 LEU O O N N 237 LEU CB C N N 238 LEU CG C N N 239 LEU CD1 C N N 240 LEU CD2 C N N 241 LEU OXT O N N 242 LEU H H N N 243 LEU H2 H N N 244 LEU HA H N N 245 LEU HB2 H N N 246 LEU HB3 H N N 247 LEU HG H N N 248 LEU HD11 H N N 249 LEU HD12 H N N 250 LEU HD13 H N N 251 LEU HD21 H N N 252 LEU HD22 H N N 253 LEU HD23 H N N 254 LEU HXT H N N 255 LYS N N N N 256 LYS CA C N S 257 LYS C C N N 258 LYS O O N N 259 LYS CB C N N 260 LYS CG C N N 261 LYS CD C N N 262 LYS CE C N N 263 LYS NZ N N N 264 LYS OXT O N N 265 LYS H H N N 266 LYS H2 H N N 267 LYS HA H N N 268 LYS HB2 H N N 269 LYS HB3 H N N 270 LYS HG2 H N N 271 LYS HG3 H N N 272 LYS HD2 H N N 273 LYS HD3 H N N 274 LYS HE2 H N N 275 LYS HE3 H N N 276 LYS HZ1 H N N 277 LYS HZ2 H N N 278 LYS HZ3 H N N 279 LYS HXT H N N 280 MET N N N N 281 MET CA C N S 282 MET C C N N 283 MET O O N N 284 MET CB C N N 285 MET CG C N N 286 MET SD S N N 287 MET CE C N N 288 MET OXT O N N 289 MET H H N N 290 MET H2 H N N 291 MET HA H N N 292 MET HB2 H N N 293 MET HB3 H N N 294 MET HG2 H N N 295 MET HG3 H N N 296 MET HE1 H N N 297 MET HE2 H N N 298 MET HE3 H N N 299 MET HXT H N N 300 PHE N N N N 301 PHE CA C N S 302 PHE C C N N 303 PHE O O N N 304 PHE CB C N N 305 PHE CG C Y N 306 PHE CD1 C Y N 307 PHE CD2 C Y N 308 PHE CE1 C Y N 309 PHE CE2 C Y N 310 PHE CZ C Y N 311 PHE OXT O N N 312 PHE H H N N 313 PHE H2 H N N 314 PHE HA H N N 315 PHE HB2 H N N 316 PHE HB3 H N N 317 PHE HD1 H N N 318 PHE HD2 H N N 319 PHE HE1 H N N 320 PHE HE2 H N N 321 PHE HZ H N N 322 PHE HXT H N N 323 PRO N N N N 324 PRO CA C N S 325 PRO C C N N 326 PRO O O N N 327 PRO CB C N N 328 PRO CG C N N 329 PRO CD C N N 330 PRO OXT O N N 331 PRO H H N N 332 PRO HA H N N 333 PRO HB2 H N N 334 PRO HB3 H N N 335 PRO HG2 H N N 336 PRO HG3 H N N 337 PRO HD2 H N N 338 PRO HD3 H N N 339 PRO HXT H N N 340 SER N N N N 341 SER CA C N S 342 SER C C N N 343 SER O O N N 344 SER CB C N N 345 SER OG O N N 346 SER OXT O N N 347 SER H H N N 348 SER H2 H N N 349 SER HA H N N 350 SER HB2 H N N 351 SER HB3 H N N 352 SER HG H N N 353 SER HXT H N N 354 THR N N N N 355 THR CA C N S 356 THR C C N N 357 THR O O N N 358 THR CB C N R 359 THR OG1 O N N 360 THR CG2 C N N 361 THR OXT O N N 362 THR H H N N 363 THR H2 H N N 364 THR HA H N N 365 THR HB H N N 366 THR HG1 H N N 367 THR HG21 H N N 368 THR HG22 H N N 369 THR HG23 H N N 370 THR HXT H N N 371 TRP N N N N 372 TRP CA C N S 373 TRP C C N N 374 TRP O O N N 375 TRP CB C N N 376 TRP CG C Y N 377 TRP CD1 C Y N 378 TRP CD2 C Y N 379 TRP NE1 N Y N 380 TRP CE2 C Y N 381 TRP CE3 C Y N 382 TRP CZ2 C Y N 383 TRP CZ3 C Y N 384 TRP CH2 C Y N 385 TRP OXT O N N 386 TRP H H N N 387 TRP H2 H N N 388 TRP HA H N N 389 TRP HB2 H N N 390 TRP HB3 H N N 391 TRP HD1 H N N 392 TRP HE1 H N N 393 TRP HE3 H N N 394 TRP HZ2 H N N 395 TRP HZ3 H N N 396 TRP HH2 H N N 397 TRP HXT H N N 398 TYR N N N N 399 TYR CA C N S 400 TYR C C N N 401 TYR O O N N 402 TYR CB C N N 403 TYR CG C Y N 404 TYR CD1 C Y N 405 TYR CD2 C Y N 406 TYR CE1 C Y N 407 TYR CE2 C Y N 408 TYR CZ C Y N 409 TYR OH O N N 410 TYR OXT O N N 411 TYR H H N N 412 TYR H2 H N N 413 TYR HA H N N 414 TYR HB2 H N N 415 TYR HB3 H N N 416 TYR HD1 H N N 417 TYR HD2 H N N 418 TYR HE1 H N N 419 TYR HE2 H N N 420 TYR HH H N N 421 TYR HXT H N N 422 VAL N N N N 423 VAL CA C N S 424 VAL C C N N 425 VAL O O N N 426 VAL CB C N N 427 VAL CG1 C N N 428 VAL CG2 C N N 429 VAL OXT O N N 430 VAL H H N N 431 VAL H2 H N N 432 VAL HA H N N 433 VAL HB H N N 434 VAL HG11 H N N 435 VAL HG12 H N N 436 VAL HG13 H N N 437 VAL HG21 H N N 438 VAL HG22 H N N 439 VAL HG23 H N N 440 VAL HXT H N N 441 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 B6D C1 C2 sing N N 70 B6D C1 O1 sing N N 71 B6D N2 C7 sing N N 72 B6D C3 O3 sing N N 73 B6D C3 C2 sing N N 74 B6D C4 C3 sing N N 75 B6D C4 H4 sing N N 76 B6D C5 C4 sing N N 77 B6D C5 O5 sing N N 78 B6D C6 C5 sing N N 79 B6D C6 H61 sing N N 80 B6D C7 O7 doub N N 81 B6D C7 C8 sing N N 82 B6D C8 H81 sing N N 83 B6D C8 H82 sing N N 84 B6D C9 H9A sing N N 85 B6D C9 C10 sing N N 86 B6D C2 N2 sing N N 87 B6D C2 H2 sing N N 88 B6D N4 C4 sing N N 89 B6D C10 N4 sing N N 90 B6D C10 O10 doub N N 91 B6D O5 C1 sing N N 92 B6D O3 HO3 sing N N 93 B6D H1 C1 sing N N 94 B6D H3 C3 sing N N 95 B6D HN2 N2 sing N N 96 B6D H5 C5 sing N N 97 B6D H83 C8 sing N N 98 B6D HN4 N4 sing N N 99 B6D H9 C9 sing N N 100 B6D H9B C9 sing N N 101 B6D H62 C6 sing N N 102 B6D H6A C6 sing N N 103 B6D O1 HO1 sing N N 104 CYS N CA sing N N 105 CYS N H sing N N 106 CYS N H2 sing N N 107 CYS CA C sing N N 108 CYS CA CB sing N N 109 CYS CA HA sing N N 110 CYS C O doub N N 111 CYS C OXT sing N N 112 CYS CB SG sing N N 113 CYS CB HB2 sing N N 114 CYS CB HB3 sing N N 115 CYS SG HG sing N N 116 CYS OXT HXT sing N N 117 G3P O1 C1 sing N N 118 G3P C1 C2 sing N N 119 G3P C2 O2 sing N N 120 G3P C2 C3 sing N N 121 G3P C3 O1P sing N N 122 G3P O1P P sing N N 123 G3P O4P P sing N N 124 G3P O2P P doub N N 125 G3P O3P P sing N N 126 G3P O1 HO1 sing N N 127 G3P C1 H11 sing N N 128 G3P C1 H12 sing N N 129 G3P C2 H2 sing N N 130 G3P O2 HO2 sing N N 131 G3P C3 H31 sing N N 132 G3P C3 H32 sing N N 133 G3P O3P HOP3 sing N N 134 G3P O4P HOP4 sing N N 135 GLN N CA sing N N 136 GLN N H sing N N 137 GLN N H2 sing N N 138 GLN CA C sing N N 139 GLN CA CB sing N N 140 GLN CA HA sing N N 141 GLN C O doub N N 142 GLN C OXT sing N N 143 GLN CB CG sing N N 144 GLN CB HB2 sing N N 145 GLN CB HB3 sing N N 146 GLN CG CD sing N N 147 GLN CG HG2 sing N N 148 GLN CG HG3 sing N N 149 GLN CD OE1 doub N N 150 GLN CD NE2 sing N N 151 GLN NE2 HE21 sing N N 152 GLN NE2 HE22 sing N N 153 GLN OXT HXT sing N N 154 GLU N CA sing N N 155 GLU N H sing N N 156 GLU N H2 sing N N 157 GLU CA C sing N N 158 GLU CA CB sing N N 159 GLU CA HA sing N N 160 GLU C O doub N N 161 GLU C OXT sing N N 162 GLU CB CG sing N N 163 GLU CB HB2 sing N N 164 GLU CB HB3 sing N N 165 GLU CG CD sing N N 166 GLU CG HG2 sing N N 167 GLU CG HG3 sing N N 168 GLU CD OE1 doub N N 169 GLU CD OE2 sing N N 170 GLU OE2 HE2 sing N N 171 GLU OXT HXT sing N N 172 GLY N CA sing N N 173 GLY N H sing N N 174 GLY N H2 sing N N 175 GLY CA C sing N N 176 GLY CA HA2 sing N N 177 GLY CA HA3 sing N N 178 GLY C O doub N N 179 GLY C OXT sing N N 180 GLY OXT HXT sing N N 181 HIS N CA sing N N 182 HIS N H sing N N 183 HIS N H2 sing N N 184 HIS CA C sing N N 185 HIS CA CB sing N N 186 HIS CA HA sing N N 187 HIS C O doub N N 188 HIS C OXT sing N N 189 HIS CB CG sing N N 190 HIS CB HB2 sing N N 191 HIS CB HB3 sing N N 192 HIS CG ND1 sing Y N 193 HIS CG CD2 doub Y N 194 HIS ND1 CE1 doub Y N 195 HIS ND1 HD1 sing N N 196 HIS CD2 NE2 sing Y N 197 HIS CD2 HD2 sing N N 198 HIS CE1 NE2 sing Y N 199 HIS CE1 HE1 sing N N 200 HIS NE2 HE2 sing N N 201 HIS OXT HXT sing N N 202 ILE N CA sing N N 203 ILE N H sing N N 204 ILE N H2 sing N N 205 ILE CA C sing N N 206 ILE CA CB sing N N 207 ILE CA HA sing N N 208 ILE C O doub N N 209 ILE C OXT sing N N 210 ILE CB CG1 sing N N 211 ILE CB CG2 sing N N 212 ILE CB HB sing N N 213 ILE CG1 CD1 sing N N 214 ILE CG1 HG12 sing N N 215 ILE CG1 HG13 sing N N 216 ILE CG2 HG21 sing N N 217 ILE CG2 HG22 sing N N 218 ILE CG2 HG23 sing N N 219 ILE CD1 HD11 sing N N 220 ILE CD1 HD12 sing N N 221 ILE CD1 HD13 sing N N 222 ILE OXT HXT sing N N 223 LEU N CA sing N N 224 LEU N H sing N N 225 LEU N H2 sing N N 226 LEU CA C sing N N 227 LEU CA CB sing N N 228 LEU CA HA sing N N 229 LEU C O doub N N 230 LEU C OXT sing N N 231 LEU CB CG sing N N 232 LEU CB HB2 sing N N 233 LEU CB HB3 sing N N 234 LEU CG CD1 sing N N 235 LEU CG CD2 sing N N 236 LEU CG HG sing N N 237 LEU CD1 HD11 sing N N 238 LEU CD1 HD12 sing N N 239 LEU CD1 HD13 sing N N 240 LEU CD2 HD21 sing N N 241 LEU CD2 HD22 sing N N 242 LEU CD2 HD23 sing N N 243 LEU OXT HXT sing N N 244 LYS N CA sing N N 245 LYS N H sing N N 246 LYS N H2 sing N N 247 LYS CA C sing N N 248 LYS CA CB sing N N 249 LYS CA HA sing N N 250 LYS C O doub N N 251 LYS C OXT sing N N 252 LYS CB CG sing N N 253 LYS CB HB2 sing N N 254 LYS CB HB3 sing N N 255 LYS CG CD sing N N 256 LYS CG HG2 sing N N 257 LYS CG HG3 sing N N 258 LYS CD CE sing N N 259 LYS CD HD2 sing N N 260 LYS CD HD3 sing N N 261 LYS CE NZ sing N N 262 LYS CE HE2 sing N N 263 LYS CE HE3 sing N N 264 LYS NZ HZ1 sing N N 265 LYS NZ HZ2 sing N N 266 LYS NZ HZ3 sing N N 267 LYS OXT HXT sing N N 268 MET N CA sing N N 269 MET N H sing N N 270 MET N H2 sing N N 271 MET CA C sing N N 272 MET CA CB sing N N 273 MET CA HA sing N N 274 MET C O doub N N 275 MET C OXT sing N N 276 MET CB CG sing N N 277 MET CB HB2 sing N N 278 MET CB HB3 sing N N 279 MET CG SD sing N N 280 MET CG HG2 sing N N 281 MET CG HG3 sing N N 282 MET SD CE sing N N 283 MET CE HE1 sing N N 284 MET CE HE2 sing N N 285 MET CE HE3 sing N N 286 MET OXT HXT sing N N 287 PHE N CA sing N N 288 PHE N H sing N N 289 PHE N H2 sing N N 290 PHE CA C sing N N 291 PHE CA CB sing N N 292 PHE CA HA sing N N 293 PHE C O doub N N 294 PHE C OXT sing N N 295 PHE CB CG sing N N 296 PHE CB HB2 sing N N 297 PHE CB HB3 sing N N 298 PHE CG CD1 doub Y N 299 PHE CG CD2 sing Y N 300 PHE CD1 CE1 sing Y N 301 PHE CD1 HD1 sing N N 302 PHE CD2 CE2 doub Y N 303 PHE CD2 HD2 sing N N 304 PHE CE1 CZ doub Y N 305 PHE CE1 HE1 sing N N 306 PHE CE2 CZ sing Y N 307 PHE CE2 HE2 sing N N 308 PHE CZ HZ sing N N 309 PHE OXT HXT sing N N 310 PRO N CA sing N N 311 PRO N CD sing N N 312 PRO N H sing N N 313 PRO CA C sing N N 314 PRO CA CB sing N N 315 PRO CA HA sing N N 316 PRO C O doub N N 317 PRO C OXT sing N N 318 PRO CB CG sing N N 319 PRO CB HB2 sing N N 320 PRO CB HB3 sing N N 321 PRO CG CD sing N N 322 PRO CG HG2 sing N N 323 PRO CG HG3 sing N N 324 PRO CD HD2 sing N N 325 PRO CD HD3 sing N N 326 PRO OXT HXT sing N N 327 SER N CA sing N N 328 SER N H sing N N 329 SER N H2 sing N N 330 SER CA C sing N N 331 SER CA CB sing N N 332 SER CA HA sing N N 333 SER C O doub N N 334 SER C OXT sing N N 335 SER CB OG sing N N 336 SER CB HB2 sing N N 337 SER CB HB3 sing N N 338 SER OG HG sing N N 339 SER OXT HXT sing N N 340 THR N CA sing N N 341 THR N H sing N N 342 THR N H2 sing N N 343 THR CA C sing N N 344 THR CA CB sing N N 345 THR CA HA sing N N 346 THR C O doub N N 347 THR C OXT sing N N 348 THR CB OG1 sing N N 349 THR CB CG2 sing N N 350 THR CB HB sing N N 351 THR OG1 HG1 sing N N 352 THR CG2 HG21 sing N N 353 THR CG2 HG22 sing N N 354 THR CG2 HG23 sing N N 355 THR OXT HXT sing N N 356 TRP N CA sing N N 357 TRP N H sing N N 358 TRP N H2 sing N N 359 TRP CA C sing N N 360 TRP CA CB sing N N 361 TRP CA HA sing N N 362 TRP C O doub N N 363 TRP C OXT sing N N 364 TRP CB CG sing N N 365 TRP CB HB2 sing N N 366 TRP CB HB3 sing N N 367 TRP CG CD1 doub Y N 368 TRP CG CD2 sing Y N 369 TRP CD1 NE1 sing Y N 370 TRP CD1 HD1 sing N N 371 TRP CD2 CE2 doub Y N 372 TRP CD2 CE3 sing Y N 373 TRP NE1 CE2 sing Y N 374 TRP NE1 HE1 sing N N 375 TRP CE2 CZ2 sing Y N 376 TRP CE3 CZ3 doub Y N 377 TRP CE3 HE3 sing N N 378 TRP CZ2 CH2 doub Y N 379 TRP CZ2 HZ2 sing N N 380 TRP CZ3 CH2 sing Y N 381 TRP CZ3 HZ3 sing N N 382 TRP CH2 HH2 sing N N 383 TRP OXT HXT sing N N 384 TYR N CA sing N N 385 TYR N H sing N N 386 TYR N H2 sing N N 387 TYR CA C sing N N 388 TYR CA CB sing N N 389 TYR CA HA sing N N 390 TYR C O doub N N 391 TYR C OXT sing N N 392 TYR CB CG sing N N 393 TYR CB HB2 sing N N 394 TYR CB HB3 sing N N 395 TYR CG CD1 doub Y N 396 TYR CG CD2 sing Y N 397 TYR CD1 CE1 sing Y N 398 TYR CD1 HD1 sing N N 399 TYR CD2 CE2 doub Y N 400 TYR CD2 HD2 sing N N 401 TYR CE1 CZ doub Y N 402 TYR CE1 HE1 sing N N 403 TYR CE2 CZ sing Y N 404 TYR CE2 HE2 sing N N 405 TYR CZ OH sing N N 406 TYR OH HH sing N N 407 TYR OXT HXT sing N N 408 VAL N CA sing N N 409 VAL N H sing N N 410 VAL N H2 sing N N 411 VAL CA C sing N N 412 VAL CA CB sing N N 413 VAL CA HA sing N N 414 VAL C O doub N N 415 VAL C OXT sing N N 416 VAL CB CG1 sing N N 417 VAL CB CG2 sing N N 418 VAL CB HB sing N N 419 VAL CG1 HG11 sing N N 420 VAL CG1 HG12 sing N N 421 VAL CG1 HG13 sing N N 422 VAL CG2 HG21 sing N N 423 VAL CG2 HG22 sing N N 424 VAL CG2 HG23 sing N N 425 VAL OXT HXT sing N N 426 # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 604162 _em_entity_assembly_naturalsource.organism 'Neisseria meningitidis 8013' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.details ? _em_helical_entity.axial_symmetry C1 _em_helical_entity.angular_rotation_per_subunit 100.700 _em_helical_entity.axial_rise_per_subunit 10.449 # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 40 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON IV (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? ? ? OTHER ? 8 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 9 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? CLASSIFICATION ? 11 1 ? ? ? ? RECONSTRUCTION ? 12 1 ? ? ? ? 'MODEL REFINEMENT' ? 13 ? 1 ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Agence Nationale de la Recherche (ANR)' _pdbx_audit_support.country France _pdbx_audit_support.grant_number 'ANR 18 CE11 0022' _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 B6D ? ? B6D ? ? 'SUBJECT OF INVESTIGATION' ? 2 G3P ? ? G3P ? ? 'SUBJECT OF INVESTIGATION' ? # _space_group.crystal_system triclinic _space_group.name_H-M_alt 'P 1' _space_group.IT_number 1 _space_group.name_Hall 'P 1' _space_group.id 1 # _atom_sites.entry_id 8PIZ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_