data_8PM4 # _entry.id 8PM4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.390 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8PM4 pdb_00008pm4 10.2210/pdb8pm4/pdb WWPDB D_1292131451 ? ? EMDB EMD-17757 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-02-07 2 'Structure model' 1 1 2024-02-14 3 'Structure model' 1 2 2024-04-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' entity 2 2 'Structure model' entity_name_com 3 3 'Structure model' citation 4 3 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_entity.details' 2 3 'Structure model' '_citation.journal_volume' 3 3 'Structure model' '_citation.page_first' 4 3 'Structure model' '_citation.page_last' 5 3 'Structure model' '_citation_author.identifier_ORCID' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8PM4 _pdbx_database_status.recvd_initial_deposition_date 2023-06-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of the Cas12m-crRNA-target DNA complex' _pdbx_database_related.db_id EMD-17757 _pdbx_database_related.content_type 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 tautvydas.karvelis@bti.vu.lt Tautvydas Karvelis ? 'principal investigator/group leader' 0000-0002-0685-2947 3 siksnys@ibt.lt Virginijus Siksnys ? 'principal investigator/group leader' 0000-0003-1983-2096 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Sasnauskas, G.' 1 0000-0002-3185-2682 'Tamulaitiene, G.' 2 0000-0002-9794-3544 'Karvelis, T.' 3 0000-0002-0685-2947 'Bigelyte, G.' 4 0000-0002-1432-1433 'Siksnys, V.' 5 0000-0003-1983-2096 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 52 _citation.language ? _citation.page_first 3234 _citation.page_last 3248 _citation.title 'Innate programmable DNA binding by CRISPR-Cas12m effectors enable efficient base editing.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkae016 _citation.pdbx_database_id_PubMed 38261981 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bigelyte, G.' 1 ? primary 'Duchovska, B.' 2 ? primary 'Zedaveinyte, R.' 3 ? primary 'Sasnauskas, G.' 4 ? primary 'Sinkunas, T.' 5 ? primary 'Dalgediene, I.' 6 ? primary 'Tamulaitiene, G.' 7 ? primary 'Silanskas, A.' 8 ? primary 'Kazlauskas, D.' 9 ? primary 'Valancauskas, L.' 10 ? primary 'Madariaga-Marcos, J.' 11 ? primary 'Seidel, R.' 12 ? primary 'Siksnys, V.' 13 ? primary 'Karvelis, T.' 14 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Transposase 68223.586 1 ? ? ? 'Cas12m protein' 2 polymer syn 'crRNA, chain B' 18751.240 1 ? ? ? ? 3 polymer syn 'DNA oligoduplex, target strand, chain C' 13556.727 1 ? ? ? ? 4 polymer syn 'DNA oligoduplex, non-target strand, chain D' 13543.744 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Cas12m protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SNAGGGGMTRVTVQTAGVHYKWQMPDQLTQQLRLAHDLREDLVTLEYEYEDAVKAVWSSYPAVAALEAQVAELDERASEL ASTVKEEKSRQRTKRPSHPAVAQLAETRAQLKAAKASRREAIASVRDEATERLRTISDERYAAQKQLYRDYCTDGLLYWA TFNAVLDHHKTAVKRIAAHRKQGRAAQLRHHRWDGTGTISVQLQRQATDPARTPAIIADADTGKWRSSLIVPWVNPDVWD TMDRASRRKAGRVVIRMRCGSSRNPDGTKTSEWIDVPVQQHRMLPADADITAAQLTVRREGADLRATIGITAKIPDQGEV DEGPTIAVHLGWRSSDHGTVVATWRSTEPLDIPETLRGVITTQSAERTVGSIVVPHRIEQRVHHHATVASHRDLAVDSIR DTLVAWLTEHGPQPHPYDGDPITAASVQRWKAPRRFAWLALQWRDTPPPEGADIAETLEAWRRADKKLWLESEHGRGRAL RHRTDLHRQVAAYFAGVAGRIVVDDSDIAQIAGTAKHSELLTDVDRQIARRRAIAAPGMLRAAIVAAATRDEVPTTTVSH TGLSRVHAACGHENPADDRYLMQPVLCDGCGRTYDTDLSATILMLQRASAATSN ; ;SNAGGGGMTRVTVQTAGVHYKWQMPDQLTQQLRLAHDLREDLVTLEYEYEDAVKAVWSSYPAVAALEAQVAELDERASEL ASTVKEEKSRQRTKRPSHPAVAQLAETRAQLKAAKASRREAIASVRDEATERLRTISDERYAAQKQLYRDYCTDGLLYWA TFNAVLDHHKTAVKRIAAHRKQGRAAQLRHHRWDGTGTISVQLQRQATDPARTPAIIADADTGKWRSSLIVPWVNPDVWD TMDRASRRKAGRVVIRMRCGSSRNPDGTKTSEWIDVPVQQHRMLPADADITAAQLTVRREGADLRATIGITAKIPDQGEV DEGPTIAVHLGWRSSDHGTVVATWRSTEPLDIPETLRGVITTQSAERTVGSIVVPHRIEQRVHHHATVASHRDLAVDSIR DTLVAWLTEHGPQPHPYDGDPITAASVQRWKAPRRFAWLALQWRDTPPPEGADIAETLEAWRRADKKLWLESEHGRGRAL RHRTDLHRQVAAYFAGVAGRIVVDDSDIAQIAGTAKHSELLTDVDRQIARRRAIAAPGMLRAAIVAAATRDEVPTTTVSH TGLSRVHAACGHENPADDRYLMQPVLCDGCGRTYDTDLSATILMLQRASAATSN ; A ? 2 polyribonucleotide no no GGGUGUCAACGCCAGCGCGGAGGCGUCAAAUCCGCGACAGUUGACCCAACGUCGCCGG GGGUGUCAACGCCAGCGCGGAGGCGUCAAAUCCGCGACAGUUGACCCAACGUCGCCGG B ? 3 polydeoxyribonucleotide no no ;(DC)(DC)(DG)(DG)(DC)(DG)(DA)(DC)(DG)(DT)(DT)(DG)(DG)(DG)(DT)(DC)(DA)(DA)(DC)(DT) (DG)(DA)(DA)(DA)(DT)(DG)(DT)(DC)(DT)(DG)(DT)(DT)(DT)(DC)(DT)(DC)(DA)(DA)(DC)(DA) (DA)(DA)(DA)(DA) ; CCGGCGACGTTGGGTCAACTGAAATGTCTGTTTCTCAACAAAAA C ? 4 polydeoxyribonucleotide no no ;(DC)(DC)(DG)(DG)(DC)(DG)(DA)(DC)(DG)(DT)(DT)(DG)(DG)(DG)(DT)(DC)(DA)(DA)(DC)(DT) (DG)(DA)(DA)(DA)(DC)(DA)(DG)(DA)(DC)(DA)(DT)(DT)(DT)(DC)(DT)(DC)(DA)(DA)(DC)(DA) (DA)(DA)(DA)(DA) ; CCGGCGACGTTGGGTCAACTGAAACAGACATTTCTCAACAAAAA D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 GLY n 1 5 GLY n 1 6 GLY n 1 7 GLY n 1 8 MET n 1 9 THR n 1 10 ARG n 1 11 VAL n 1 12 THR n 1 13 VAL n 1 14 GLN n 1 15 THR n 1 16 ALA n 1 17 GLY n 1 18 VAL n 1 19 HIS n 1 20 TYR n 1 21 LYS n 1 22 TRP n 1 23 GLN n 1 24 MET n 1 25 PRO n 1 26 ASP n 1 27 GLN n 1 28 LEU n 1 29 THR n 1 30 GLN n 1 31 GLN n 1 32 LEU n 1 33 ARG n 1 34 LEU n 1 35 ALA n 1 36 HIS n 1 37 ASP n 1 38 LEU n 1 39 ARG n 1 40 GLU n 1 41 ASP n 1 42 LEU n 1 43 VAL n 1 44 THR n 1 45 LEU n 1 46 GLU n 1 47 TYR n 1 48 GLU n 1 49 TYR n 1 50 GLU n 1 51 ASP n 1 52 ALA n 1 53 VAL n 1 54 LYS n 1 55 ALA n 1 56 VAL n 1 57 TRP n 1 58 SER n 1 59 SER n 1 60 TYR n 1 61 PRO n 1 62 ALA n 1 63 VAL n 1 64 ALA n 1 65 ALA n 1 66 LEU n 1 67 GLU n 1 68 ALA n 1 69 GLN n 1 70 VAL n 1 71 ALA n 1 72 GLU n 1 73 LEU n 1 74 ASP n 1 75 GLU n 1 76 ARG n 1 77 ALA n 1 78 SER n 1 79 GLU n 1 80 LEU n 1 81 ALA n 1 82 SER n 1 83 THR n 1 84 VAL n 1 85 LYS n 1 86 GLU n 1 87 GLU n 1 88 LYS n 1 89 SER n 1 90 ARG n 1 91 GLN n 1 92 ARG n 1 93 THR n 1 94 LYS n 1 95 ARG n 1 96 PRO n 1 97 SER n 1 98 HIS n 1 99 PRO n 1 100 ALA n 1 101 VAL n 1 102 ALA n 1 103 GLN n 1 104 LEU n 1 105 ALA n 1 106 GLU n 1 107 THR n 1 108 ARG n 1 109 ALA n 1 110 GLN n 1 111 LEU n 1 112 LYS n 1 113 ALA n 1 114 ALA n 1 115 LYS n 1 116 ALA n 1 117 SER n 1 118 ARG n 1 119 ARG n 1 120 GLU n 1 121 ALA n 1 122 ILE n 1 123 ALA n 1 124 SER n 1 125 VAL n 1 126 ARG n 1 127 ASP n 1 128 GLU n 1 129 ALA n 1 130 THR n 1 131 GLU n 1 132 ARG n 1 133 LEU n 1 134 ARG n 1 135 THR n 1 136 ILE n 1 137 SER n 1 138 ASP n 1 139 GLU n 1 140 ARG n 1 141 TYR n 1 142 ALA n 1 143 ALA n 1 144 GLN n 1 145 LYS n 1 146 GLN n 1 147 LEU n 1 148 TYR n 1 149 ARG n 1 150 ASP n 1 151 TYR n 1 152 CYS n 1 153 THR n 1 154 ASP n 1 155 GLY n 1 156 LEU n 1 157 LEU n 1 158 TYR n 1 159 TRP n 1 160 ALA n 1 161 THR n 1 162 PHE n 1 163 ASN n 1 164 ALA n 1 165 VAL n 1 166 LEU n 1 167 ASP n 1 168 HIS n 1 169 HIS n 1 170 LYS n 1 171 THR n 1 172 ALA n 1 173 VAL n 1 174 LYS n 1 175 ARG n 1 176 ILE n 1 177 ALA n 1 178 ALA n 1 179 HIS n 1 180 ARG n 1 181 LYS n 1 182 GLN n 1 183 GLY n 1 184 ARG n 1 185 ALA n 1 186 ALA n 1 187 GLN n 1 188 LEU n 1 189 ARG n 1 190 HIS n 1 191 HIS n 1 192 ARG n 1 193 TRP n 1 194 ASP n 1 195 GLY n 1 196 THR n 1 197 GLY n 1 198 THR n 1 199 ILE n 1 200 SER n 1 201 VAL n 1 202 GLN n 1 203 LEU n 1 204 GLN n 1 205 ARG n 1 206 GLN n 1 207 ALA n 1 208 THR n 1 209 ASP n 1 210 PRO n 1 211 ALA n 1 212 ARG n 1 213 THR n 1 214 PRO n 1 215 ALA n 1 216 ILE n 1 217 ILE n 1 218 ALA n 1 219 ASP n 1 220 ALA n 1 221 ASP n 1 222 THR n 1 223 GLY n 1 224 LYS n 1 225 TRP n 1 226 ARG n 1 227 SER n 1 228 SER n 1 229 LEU n 1 230 ILE n 1 231 VAL n 1 232 PRO n 1 233 TRP n 1 234 VAL n 1 235 ASN n 1 236 PRO n 1 237 ASP n 1 238 VAL n 1 239 TRP n 1 240 ASP n 1 241 THR n 1 242 MET n 1 243 ASP n 1 244 ARG n 1 245 ALA n 1 246 SER n 1 247 ARG n 1 248 ARG n 1 249 LYS n 1 250 ALA n 1 251 GLY n 1 252 ARG n 1 253 VAL n 1 254 VAL n 1 255 ILE n 1 256 ARG n 1 257 MET n 1 258 ARG n 1 259 CYS n 1 260 GLY n 1 261 SER n 1 262 SER n 1 263 ARG n 1 264 ASN n 1 265 PRO n 1 266 ASP n 1 267 GLY n 1 268 THR n 1 269 LYS n 1 270 THR n 1 271 SER n 1 272 GLU n 1 273 TRP n 1 274 ILE n 1 275 ASP n 1 276 VAL n 1 277 PRO n 1 278 VAL n 1 279 GLN n 1 280 GLN n 1 281 HIS n 1 282 ARG n 1 283 MET n 1 284 LEU n 1 285 PRO n 1 286 ALA n 1 287 ASP n 1 288 ALA n 1 289 ASP n 1 290 ILE n 1 291 THR n 1 292 ALA n 1 293 ALA n 1 294 GLN n 1 295 LEU n 1 296 THR n 1 297 VAL n 1 298 ARG n 1 299 ARG n 1 300 GLU n 1 301 GLY n 1 302 ALA n 1 303 ASP n 1 304 LEU n 1 305 ARG n 1 306 ALA n 1 307 THR n 1 308 ILE n 1 309 GLY n 1 310 ILE n 1 311 THR n 1 312 ALA n 1 313 LYS n 1 314 ILE n 1 315 PRO n 1 316 ASP n 1 317 GLN n 1 318 GLY n 1 319 GLU n 1 320 VAL n 1 321 ASP n 1 322 GLU n 1 323 GLY n 1 324 PRO n 1 325 THR n 1 326 ILE n 1 327 ALA n 1 328 VAL n 1 329 HIS n 1 330 LEU n 1 331 GLY n 1 332 TRP n 1 333 ARG n 1 334 SER n 1 335 SER n 1 336 ASP n 1 337 HIS n 1 338 GLY n 1 339 THR n 1 340 VAL n 1 341 VAL n 1 342 ALA n 1 343 THR n 1 344 TRP n 1 345 ARG n 1 346 SER n 1 347 THR n 1 348 GLU n 1 349 PRO n 1 350 LEU n 1 351 ASP n 1 352 ILE n 1 353 PRO n 1 354 GLU n 1 355 THR n 1 356 LEU n 1 357 ARG n 1 358 GLY n 1 359 VAL n 1 360 ILE n 1 361 THR n 1 362 THR n 1 363 GLN n 1 364 SER n 1 365 ALA n 1 366 GLU n 1 367 ARG n 1 368 THR n 1 369 VAL n 1 370 GLY n 1 371 SER n 1 372 ILE n 1 373 VAL n 1 374 VAL n 1 375 PRO n 1 376 HIS n 1 377 ARG n 1 378 ILE n 1 379 GLU n 1 380 GLN n 1 381 ARG n 1 382 VAL n 1 383 HIS n 1 384 HIS n 1 385 HIS n 1 386 ALA n 1 387 THR n 1 388 VAL n 1 389 ALA n 1 390 SER n 1 391 HIS n 1 392 ARG n 1 393 ASP n 1 394 LEU n 1 395 ALA n 1 396 VAL n 1 397 ASP n 1 398 SER n 1 399 ILE n 1 400 ARG n 1 401 ASP n 1 402 THR n 1 403 LEU n 1 404 VAL n 1 405 ALA n 1 406 TRP n 1 407 LEU n 1 408 THR n 1 409 GLU n 1 410 HIS n 1 411 GLY n 1 412 PRO n 1 413 GLN n 1 414 PRO n 1 415 HIS n 1 416 PRO n 1 417 TYR n 1 418 ASP n 1 419 GLY n 1 420 ASP n 1 421 PRO n 1 422 ILE n 1 423 THR n 1 424 ALA n 1 425 ALA n 1 426 SER n 1 427 VAL n 1 428 GLN n 1 429 ARG n 1 430 TRP n 1 431 LYS n 1 432 ALA n 1 433 PRO n 1 434 ARG n 1 435 ARG n 1 436 PHE n 1 437 ALA n 1 438 TRP n 1 439 LEU n 1 440 ALA n 1 441 LEU n 1 442 GLN n 1 443 TRP n 1 444 ARG n 1 445 ASP n 1 446 THR n 1 447 PRO n 1 448 PRO n 1 449 PRO n 1 450 GLU n 1 451 GLY n 1 452 ALA n 1 453 ASP n 1 454 ILE n 1 455 ALA n 1 456 GLU n 1 457 THR n 1 458 LEU n 1 459 GLU n 1 460 ALA n 1 461 TRP n 1 462 ARG n 1 463 ARG n 1 464 ALA n 1 465 ASP n 1 466 LYS n 1 467 LYS n 1 468 LEU n 1 469 TRP n 1 470 LEU n 1 471 GLU n 1 472 SER n 1 473 GLU n 1 474 HIS n 1 475 GLY n 1 476 ARG n 1 477 GLY n 1 478 ARG n 1 479 ALA n 1 480 LEU n 1 481 ARG n 1 482 HIS n 1 483 ARG n 1 484 THR n 1 485 ASP n 1 486 LEU n 1 487 HIS n 1 488 ARG n 1 489 GLN n 1 490 VAL n 1 491 ALA n 1 492 ALA n 1 493 TYR n 1 494 PHE n 1 495 ALA n 1 496 GLY n 1 497 VAL n 1 498 ALA n 1 499 GLY n 1 500 ARG n 1 501 ILE n 1 502 VAL n 1 503 VAL n 1 504 ASP n 1 505 ASP n 1 506 SER n 1 507 ASP n 1 508 ILE n 1 509 ALA n 1 510 GLN n 1 511 ILE n 1 512 ALA n 1 513 GLY n 1 514 THR n 1 515 ALA n 1 516 LYS n 1 517 HIS n 1 518 SER n 1 519 GLU n 1 520 LEU n 1 521 LEU n 1 522 THR n 1 523 ASP n 1 524 VAL n 1 525 ASP n 1 526 ARG n 1 527 GLN n 1 528 ILE n 1 529 ALA n 1 530 ARG n 1 531 ARG n 1 532 ARG n 1 533 ALA n 1 534 ILE n 1 535 ALA n 1 536 ALA n 1 537 PRO n 1 538 GLY n 1 539 MET n 1 540 LEU n 1 541 ARG n 1 542 ALA n 1 543 ALA n 1 544 ILE n 1 545 VAL n 1 546 ALA n 1 547 ALA n 1 548 ALA n 1 549 THR n 1 550 ARG n 1 551 ASP n 1 552 GLU n 1 553 VAL n 1 554 PRO n 1 555 THR n 1 556 THR n 1 557 THR n 1 558 VAL n 1 559 SER n 1 560 HIS n 1 561 THR n 1 562 GLY n 1 563 LEU n 1 564 SER n 1 565 ARG n 1 566 VAL n 1 567 HIS n 1 568 ALA n 1 569 ALA n 1 570 CYS n 1 571 GLY n 1 572 HIS n 1 573 GLU n 1 574 ASN n 1 575 PRO n 1 576 ALA n 1 577 ASP n 1 578 ASP n 1 579 ARG n 1 580 TYR n 1 581 LEU n 1 582 MET n 1 583 GLN n 1 584 PRO n 1 585 VAL n 1 586 LEU n 1 587 CYS n 1 588 ASP n 1 589 GLY n 1 590 CYS n 1 591 GLY n 1 592 ARG n 1 593 THR n 1 594 TYR n 1 595 ASP n 1 596 THR n 1 597 ASP n 1 598 LEU n 1 599 SER n 1 600 ALA n 1 601 THR n 1 602 ILE n 1 603 LEU n 1 604 MET n 1 605 LEU n 1 606 GLN n 1 607 ARG n 1 608 ALA n 1 609 SER n 1 610 ALA n 1 611 ALA n 1 612 THR n 1 613 SER n 1 614 ASN n 2 1 G n 2 2 G n 2 3 G n 2 4 U n 2 5 G n 2 6 U n 2 7 C n 2 8 A n 2 9 A n 2 10 C n 2 11 G n 2 12 C n 2 13 C n 2 14 A n 2 15 G n 2 16 C n 2 17 G n 2 18 C n 2 19 G n 2 20 G n 2 21 A n 2 22 G n 2 23 G n 2 24 C n 2 25 G n 2 26 U n 2 27 C n 2 28 A n 2 29 A n 2 30 A n 2 31 U n 2 32 C n 2 33 C n 2 34 G n 2 35 C n 2 36 G n 2 37 A n 2 38 C n 2 39 A n 2 40 G n 2 41 U n 2 42 U n 2 43 G n 2 44 A n 2 45 C n 2 46 C n 2 47 C n 2 48 A n 2 49 A n 2 50 C n 2 51 G n 2 52 U n 2 53 C n 2 54 G n 2 55 C n 2 56 C n 2 57 G n 2 58 G n 3 1 DC n 3 2 DC n 3 3 DG n 3 4 DG n 3 5 DC n 3 6 DG n 3 7 DA n 3 8 DC n 3 9 DG n 3 10 DT n 3 11 DT n 3 12 DG n 3 13 DG n 3 14 DG n 3 15 DT n 3 16 DC n 3 17 DA n 3 18 DA n 3 19 DC n 3 20 DT n 3 21 DG n 3 22 DA n 3 23 DA n 3 24 DA n 3 25 DT n 3 26 DG n 3 27 DT n 3 28 DC n 3 29 DT n 3 30 DG n 3 31 DT n 3 32 DT n 3 33 DT n 3 34 DC n 3 35 DT n 3 36 DC n 3 37 DA n 3 38 DA n 3 39 DC n 3 40 DA n 3 41 DA n 3 42 DA n 3 43 DA n 3 44 DA n 4 1 DC n 4 2 DC n 4 3 DG n 4 4 DG n 4 5 DC n 4 6 DG n 4 7 DA n 4 8 DC n 4 9 DG n 4 10 DT n 4 11 DT n 4 12 DG n 4 13 DG n 4 14 DG n 4 15 DT n 4 16 DC n 4 17 DA n 4 18 DA n 4 19 DC n 4 20 DT n 4 21 DG n 4 22 DA n 4 23 DA n 4 24 DA n 4 25 DC n 4 26 DA n 4 27 DG n 4 28 DA n 4 29 DC n 4 30 DA n 4 31 DT n 4 32 DT n 4 33 DT n 4 34 DC n 4 35 DT n 4 36 DC n 4 37 DA n 4 38 DA n 4 39 DC n 4 40 DA n 4 41 DA n 4 42 DA n 4 43 DA n 4 44 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 614 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene GOOTI_202_00040 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Gordonia otitidis NBRC 100426' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1108044 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli str. K-12 substr. DH10B' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 316385 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 58 'Gordonia otitidis NBRC 100426' ? 1108044 ? 3 1 sample 1 44 'synthetic construct' ? 32630 ? 4 1 sample 1 44 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -6 ? ? ? A . n A 1 2 ASN 2 -5 ? ? ? A . n A 1 3 ALA 3 -4 ? ? ? A . n A 1 4 GLY 4 -3 ? ? ? A . n A 1 5 GLY 5 -2 ? ? ? A . n A 1 6 GLY 6 -1 ? ? ? A . n A 1 7 GLY 7 0 ? ? ? A . n A 1 8 MET 8 1 1 MET MET A . n A 1 9 THR 9 2 2 THR THR A . n A 1 10 ARG 10 3 3 ARG ARG A . n A 1 11 VAL 11 4 4 VAL VAL A . n A 1 12 THR 12 5 5 THR THR A . n A 1 13 VAL 13 6 6 VAL VAL A . n A 1 14 GLN 14 7 7 GLN GLN A . n A 1 15 THR 15 8 8 THR THR A . n A 1 16 ALA 16 9 9 ALA ALA A . n A 1 17 GLY 17 10 10 GLY GLY A . n A 1 18 VAL 18 11 11 VAL VAL A . n A 1 19 HIS 19 12 12 HIS HIS A . n A 1 20 TYR 20 13 13 TYR TYR A . n A 1 21 LYS 21 14 14 LYS LYS A . n A 1 22 TRP 22 15 15 TRP TRP A . n A 1 23 GLN 23 16 16 GLN GLN A . n A 1 24 MET 24 17 17 MET MET A . n A 1 25 PRO 25 18 18 PRO PRO A . n A 1 26 ASP 26 19 19 ASP ASP A . n A 1 27 GLN 27 20 20 GLN GLN A . n A 1 28 LEU 28 21 21 LEU LEU A . n A 1 29 THR 29 22 22 THR THR A . n A 1 30 GLN 30 23 23 GLN GLN A . n A 1 31 GLN 31 24 24 GLN GLN A . n A 1 32 LEU 32 25 25 LEU LEU A . n A 1 33 ARG 33 26 26 ARG ARG A . n A 1 34 LEU 34 27 27 LEU LEU A . n A 1 35 ALA 35 28 28 ALA ALA A . n A 1 36 HIS 36 29 29 HIS HIS A . n A 1 37 ASP 37 30 30 ASP ASP A . n A 1 38 LEU 38 31 31 LEU LEU A . n A 1 39 ARG 39 32 32 ARG ARG A . n A 1 40 GLU 40 33 33 GLU GLU A . n A 1 41 ASP 41 34 34 ASP ASP A . n A 1 42 LEU 42 35 35 LEU LEU A . n A 1 43 VAL 43 36 36 VAL VAL A . n A 1 44 THR 44 37 37 THR THR A . n A 1 45 LEU 45 38 38 LEU LEU A . n A 1 46 GLU 46 39 39 GLU GLU A . n A 1 47 TYR 47 40 40 TYR TYR A . n A 1 48 GLU 48 41 41 GLU GLU A . n A 1 49 TYR 49 42 42 TYR TYR A . n A 1 50 GLU 50 43 43 GLU GLU A . n A 1 51 ASP 51 44 44 ASP ASP A . n A 1 52 ALA 52 45 45 ALA ALA A . n A 1 53 VAL 53 46 46 VAL VAL A . n A 1 54 LYS 54 47 47 LYS LYS A . n A 1 55 ALA 55 48 48 ALA ALA A . n A 1 56 VAL 56 49 49 VAL VAL A . n A 1 57 TRP 57 50 50 TRP TRP A . n A 1 58 SER 58 51 51 SER SER A . n A 1 59 SER 59 52 52 SER SER A . n A 1 60 TYR 60 53 53 TYR TYR A . n A 1 61 PRO 61 54 54 PRO PRO A . n A 1 62 ALA 62 55 55 ALA ALA A . n A 1 63 VAL 63 56 56 VAL VAL A . n A 1 64 ALA 64 57 57 ALA ALA A . n A 1 65 ALA 65 58 58 ALA ALA A . n A 1 66 LEU 66 59 59 LEU LEU A . n A 1 67 GLU 67 60 60 GLU GLU A . n A 1 68 ALA 68 61 61 ALA ALA A . n A 1 69 GLN 69 62 62 GLN GLN A . n A 1 70 VAL 70 63 63 VAL VAL A . n A 1 71 ALA 71 64 64 ALA ALA A . n A 1 72 GLU 72 65 65 GLU GLU A . n A 1 73 LEU 73 66 66 LEU LEU A . n A 1 74 ASP 74 67 67 ASP ASP A . n A 1 75 GLU 75 68 68 GLU GLU A . n A 1 76 ARG 76 69 69 ARG ARG A . n A 1 77 ALA 77 70 70 ALA ALA A . n A 1 78 SER 78 71 71 SER SER A . n A 1 79 GLU 79 72 72 GLU GLU A . n A 1 80 LEU 80 73 73 LEU LEU A . n A 1 81 ALA 81 74 74 ALA ALA A . n A 1 82 SER 82 75 75 SER SER A . n A 1 83 THR 83 76 76 THR THR A . n A 1 84 VAL 84 77 77 VAL VAL A . n A 1 85 LYS 85 78 78 LYS LYS A . n A 1 86 GLU 86 79 79 GLU GLU A . n A 1 87 GLU 87 80 80 GLU GLU A . n A 1 88 LYS 88 81 81 LYS LYS A . n A 1 89 SER 89 82 82 SER SER A . n A 1 90 ARG 90 83 83 ARG ARG A . n A 1 91 GLN 91 84 84 GLN GLN A . n A 1 92 ARG 92 85 85 ARG ARG A . n A 1 93 THR 93 86 86 THR THR A . n A 1 94 LYS 94 87 87 LYS LYS A . n A 1 95 ARG 95 88 88 ARG ARG A . n A 1 96 PRO 96 89 89 PRO PRO A . n A 1 97 SER 97 90 90 SER SER A . n A 1 98 HIS 98 91 91 HIS HIS A . n A 1 99 PRO 99 92 92 PRO PRO A . n A 1 100 ALA 100 93 93 ALA ALA A . n A 1 101 VAL 101 94 94 VAL VAL A . n A 1 102 ALA 102 95 95 ALA ALA A . n A 1 103 GLN 103 96 96 GLN GLN A . n A 1 104 LEU 104 97 97 LEU LEU A . n A 1 105 ALA 105 98 98 ALA ALA A . n A 1 106 GLU 106 99 99 GLU GLU A . n A 1 107 THR 107 100 100 THR THR A . n A 1 108 ARG 108 101 101 ARG ARG A . n A 1 109 ALA 109 102 102 ALA ALA A . n A 1 110 GLN 110 103 103 GLN GLN A . n A 1 111 LEU 111 104 104 LEU LEU A . n A 1 112 LYS 112 105 105 LYS LYS A . n A 1 113 ALA 113 106 106 ALA ALA A . n A 1 114 ALA 114 107 107 ALA ALA A . n A 1 115 LYS 115 108 108 LYS LYS A . n A 1 116 ALA 116 109 109 ALA ALA A . n A 1 117 SER 117 110 110 SER SER A . n A 1 118 ARG 118 111 111 ARG ARG A . n A 1 119 ARG 119 112 112 ARG ARG A . n A 1 120 GLU 120 113 113 GLU GLU A . n A 1 121 ALA 121 114 114 ALA ALA A . n A 1 122 ILE 122 115 115 ILE ILE A . n A 1 123 ALA 123 116 116 ALA ALA A . n A 1 124 SER 124 117 117 SER SER A . n A 1 125 VAL 125 118 118 VAL VAL A . n A 1 126 ARG 126 119 119 ARG ARG A . n A 1 127 ASP 127 120 120 ASP ASP A . n A 1 128 GLU 128 121 121 GLU GLU A . n A 1 129 ALA 129 122 122 ALA ALA A . n A 1 130 THR 130 123 123 THR THR A . n A 1 131 GLU 131 124 124 GLU GLU A . n A 1 132 ARG 132 125 125 ARG ARG A . n A 1 133 LEU 133 126 126 LEU LEU A . n A 1 134 ARG 134 127 127 ARG ARG A . n A 1 135 THR 135 128 128 THR THR A . n A 1 136 ILE 136 129 129 ILE ILE A . n A 1 137 SER 137 130 130 SER SER A . n A 1 138 ASP 138 131 131 ASP ASP A . n A 1 139 GLU 139 132 132 GLU GLU A . n A 1 140 ARG 140 133 133 ARG ARG A . n A 1 141 TYR 141 134 134 TYR TYR A . n A 1 142 ALA 142 135 135 ALA ALA A . n A 1 143 ALA 143 136 136 ALA ALA A . n A 1 144 GLN 144 137 137 GLN GLN A . n A 1 145 LYS 145 138 138 LYS LYS A . n A 1 146 GLN 146 139 139 GLN GLN A . n A 1 147 LEU 147 140 140 LEU LEU A . n A 1 148 TYR 148 141 141 TYR TYR A . n A 1 149 ARG 149 142 142 ARG ARG A . n A 1 150 ASP 150 143 143 ASP ASP A . n A 1 151 TYR 151 144 144 TYR TYR A . n A 1 152 CYS 152 145 145 CYS CYS A . n A 1 153 THR 153 146 146 THR THR A . n A 1 154 ASP 154 147 147 ASP ASP A . n A 1 155 GLY 155 148 148 GLY GLY A . n A 1 156 LEU 156 149 149 LEU LEU A . n A 1 157 LEU 157 150 150 LEU LEU A . n A 1 158 TYR 158 151 151 TYR TYR A . n A 1 159 TRP 159 152 152 TRP TRP A . n A 1 160 ALA 160 153 153 ALA ALA A . n A 1 161 THR 161 154 154 THR THR A . n A 1 162 PHE 162 155 155 PHE PHE A . n A 1 163 ASN 163 156 156 ASN ASN A . n A 1 164 ALA 164 157 157 ALA ALA A . n A 1 165 VAL 165 158 158 VAL VAL A . n A 1 166 LEU 166 159 159 LEU LEU A . n A 1 167 ASP 167 160 160 ASP ASP A . n A 1 168 HIS 168 161 161 HIS HIS A . n A 1 169 HIS 169 162 162 HIS HIS A . n A 1 170 LYS 170 163 163 LYS LYS A . n A 1 171 THR 171 164 164 THR THR A . n A 1 172 ALA 172 165 165 ALA ALA A . n A 1 173 VAL 173 166 166 VAL VAL A . n A 1 174 LYS 174 167 167 LYS LYS A . n A 1 175 ARG 175 168 168 ARG ARG A . n A 1 176 ILE 176 169 169 ILE ILE A . n A 1 177 ALA 177 170 170 ALA ALA A . n A 1 178 ALA 178 171 171 ALA ALA A . n A 1 179 HIS 179 172 172 HIS HIS A . n A 1 180 ARG 180 173 173 ARG ARG A . n A 1 181 LYS 181 174 174 LYS LYS A . n A 1 182 GLN 182 175 175 GLN GLN A . n A 1 183 GLY 183 176 176 GLY GLY A . n A 1 184 ARG 184 177 177 ARG ARG A . n A 1 185 ALA 185 178 178 ALA ALA A . n A 1 186 ALA 186 179 179 ALA ALA A . n A 1 187 GLN 187 180 180 GLN GLN A . n A 1 188 LEU 188 181 181 LEU LEU A . n A 1 189 ARG 189 182 182 ARG ARG A . n A 1 190 HIS 190 183 183 HIS HIS A . n A 1 191 HIS 191 184 184 HIS HIS A . n A 1 192 ARG 192 185 185 ARG ARG A . n A 1 193 TRP 193 186 186 TRP TRP A . n A 1 194 ASP 194 187 187 ASP ASP A . n A 1 195 GLY 195 188 188 GLY GLY A . n A 1 196 THR 196 189 189 THR THR A . n A 1 197 GLY 197 190 190 GLY GLY A . n A 1 198 THR 198 191 191 THR THR A . n A 1 199 ILE 199 192 192 ILE ILE A . n A 1 200 SER 200 193 193 SER SER A . n A 1 201 VAL 201 194 194 VAL VAL A . n A 1 202 GLN 202 195 195 GLN GLN A . n A 1 203 LEU 203 196 196 LEU LEU A . n A 1 204 GLN 204 197 197 GLN GLN A . n A 1 205 ARG 205 198 198 ARG ARG A . n A 1 206 GLN 206 199 199 GLN GLN A . n A 1 207 ALA 207 200 200 ALA ALA A . n A 1 208 THR 208 201 201 THR THR A . n A 1 209 ASP 209 202 202 ASP ASP A . n A 1 210 PRO 210 203 203 PRO PRO A . n A 1 211 ALA 211 204 204 ALA ALA A . n A 1 212 ARG 212 205 205 ARG ARG A . n A 1 213 THR 213 206 206 THR THR A . n A 1 214 PRO 214 207 207 PRO PRO A . n A 1 215 ALA 215 208 208 ALA ALA A . n A 1 216 ILE 216 209 209 ILE ILE A . n A 1 217 ILE 217 210 210 ILE ILE A . n A 1 218 ALA 218 211 211 ALA ALA A . n A 1 219 ASP 219 212 212 ASP ASP A . n A 1 220 ALA 220 213 213 ALA ALA A . n A 1 221 ASP 221 214 214 ASP ASP A . n A 1 222 THR 222 215 215 THR THR A . n A 1 223 GLY 223 216 216 GLY GLY A . n A 1 224 LYS 224 217 217 LYS LYS A . n A 1 225 TRP 225 218 218 TRP TRP A . n A 1 226 ARG 226 219 219 ARG ARG A . n A 1 227 SER 227 220 220 SER SER A . n A 1 228 SER 228 221 221 SER SER A . n A 1 229 LEU 229 222 222 LEU LEU A . n A 1 230 ILE 230 223 223 ILE ILE A . n A 1 231 VAL 231 224 224 VAL VAL A . n A 1 232 PRO 232 225 225 PRO PRO A . n A 1 233 TRP 233 226 226 TRP TRP A . n A 1 234 VAL 234 227 227 VAL VAL A . n A 1 235 ASN 235 228 228 ASN ASN A . n A 1 236 PRO 236 229 229 PRO PRO A . n A 1 237 ASP 237 230 230 ASP ASP A . n A 1 238 VAL 238 231 231 VAL VAL A . n A 1 239 TRP 239 232 232 TRP TRP A . n A 1 240 ASP 240 233 233 ASP ASP A . n A 1 241 THR 241 234 234 THR THR A . n A 1 242 MET 242 235 235 MET MET A . n A 1 243 ASP 243 236 236 ASP ASP A . n A 1 244 ARG 244 237 237 ARG ARG A . n A 1 245 ALA 245 238 238 ALA ALA A . n A 1 246 SER 246 239 239 SER SER A . n A 1 247 ARG 247 240 240 ARG ARG A . n A 1 248 ARG 248 241 241 ARG ARG A . n A 1 249 LYS 249 242 242 LYS LYS A . n A 1 250 ALA 250 243 243 ALA ALA A . n A 1 251 GLY 251 244 244 GLY GLY A . n A 1 252 ARG 252 245 245 ARG ARG A . n A 1 253 VAL 253 246 246 VAL VAL A . n A 1 254 VAL 254 247 247 VAL VAL A . n A 1 255 ILE 255 248 248 ILE ILE A . n A 1 256 ARG 256 249 249 ARG ARG A . n A 1 257 MET 257 250 250 MET MET A . n A 1 258 ARG 258 251 251 ARG ARG A . n A 1 259 CYS 259 252 252 CYS CYS A . n A 1 260 GLY 260 253 253 GLY GLY A . n A 1 261 SER 261 254 254 SER SER A . n A 1 262 SER 262 255 255 SER SER A . n A 1 263 ARG 263 256 256 ARG ARG A . n A 1 264 ASN 264 257 257 ASN ASN A . n A 1 265 PRO 265 258 258 PRO PRO A . n A 1 266 ASP 266 259 259 ASP ASP A . n A 1 267 GLY 267 260 260 GLY GLY A . n A 1 268 THR 268 261 261 THR THR A . n A 1 269 LYS 269 262 262 LYS LYS A . n A 1 270 THR 270 263 263 THR THR A . n A 1 271 SER 271 264 264 SER SER A . n A 1 272 GLU 272 265 265 GLU GLU A . n A 1 273 TRP 273 266 266 TRP TRP A . n A 1 274 ILE 274 267 267 ILE ILE A . n A 1 275 ASP 275 268 268 ASP ASP A . n A 1 276 VAL 276 269 269 VAL VAL A . n A 1 277 PRO 277 270 270 PRO PRO A . n A 1 278 VAL 278 271 271 VAL VAL A . n A 1 279 GLN 279 272 272 GLN GLN A . n A 1 280 GLN 280 273 273 GLN GLN A . n A 1 281 HIS 281 274 274 HIS HIS A . n A 1 282 ARG 282 275 275 ARG ARG A . n A 1 283 MET 283 276 276 MET MET A . n A 1 284 LEU 284 277 277 LEU LEU A . n A 1 285 PRO 285 278 278 PRO PRO A . n A 1 286 ALA 286 279 279 ALA ALA A . n A 1 287 ASP 287 280 280 ASP ASP A . n A 1 288 ALA 288 281 281 ALA ALA A . n A 1 289 ASP 289 282 282 ASP ASP A . n A 1 290 ILE 290 283 283 ILE ILE A . n A 1 291 THR 291 284 284 THR THR A . n A 1 292 ALA 292 285 285 ALA ALA A . n A 1 293 ALA 293 286 286 ALA ALA A . n A 1 294 GLN 294 287 287 GLN GLN A . n A 1 295 LEU 295 288 288 LEU LEU A . n A 1 296 THR 296 289 289 THR THR A . n A 1 297 VAL 297 290 290 VAL VAL A . n A 1 298 ARG 298 291 291 ARG ARG A . n A 1 299 ARG 299 292 292 ARG ARG A . n A 1 300 GLU 300 293 293 GLU GLU A . n A 1 301 GLY 301 294 294 GLY GLY A . n A 1 302 ALA 302 295 295 ALA ALA A . n A 1 303 ASP 303 296 296 ASP ASP A . n A 1 304 LEU 304 297 297 LEU LEU A . n A 1 305 ARG 305 298 298 ARG ARG A . n A 1 306 ALA 306 299 299 ALA ALA A . n A 1 307 THR 307 300 300 THR THR A . n A 1 308 ILE 308 301 301 ILE ILE A . n A 1 309 GLY 309 302 302 GLY GLY A . n A 1 310 ILE 310 303 303 ILE ILE A . n A 1 311 THR 311 304 304 THR THR A . n A 1 312 ALA 312 305 305 ALA ALA A . n A 1 313 LYS 313 306 306 LYS LYS A . n A 1 314 ILE 314 307 307 ILE ILE A . n A 1 315 PRO 315 308 308 PRO PRO A . n A 1 316 ASP 316 309 309 ASP ASP A . n A 1 317 GLN 317 310 310 GLN GLN A . n A 1 318 GLY 318 311 311 GLY GLY A . n A 1 319 GLU 319 312 312 GLU GLU A . n A 1 320 VAL 320 313 313 VAL VAL A . n A 1 321 ASP 321 314 314 ASP ASP A . n A 1 322 GLU 322 315 315 GLU GLU A . n A 1 323 GLY 323 316 316 GLY GLY A . n A 1 324 PRO 324 317 317 PRO PRO A . n A 1 325 THR 325 318 318 THR THR A . n A 1 326 ILE 326 319 319 ILE ILE A . n A 1 327 ALA 327 320 320 ALA ALA A . n A 1 328 VAL 328 321 321 VAL VAL A . n A 1 329 HIS 329 322 322 HIS HIS A . n A 1 330 LEU 330 323 323 LEU LEU A . n A 1 331 GLY 331 324 324 GLY GLY A . n A 1 332 TRP 332 325 325 TRP TRP A . n A 1 333 ARG 333 326 326 ARG ARG A . n A 1 334 SER 334 327 327 SER SER A . n A 1 335 SER 335 328 328 SER SER A . n A 1 336 ASP 336 329 329 ASP ASP A . n A 1 337 HIS 337 330 330 HIS HIS A . n A 1 338 GLY 338 331 331 GLY GLY A . n A 1 339 THR 339 332 332 THR THR A . n A 1 340 VAL 340 333 333 VAL VAL A . n A 1 341 VAL 341 334 334 VAL VAL A . n A 1 342 ALA 342 335 335 ALA ALA A . n A 1 343 THR 343 336 336 THR THR A . n A 1 344 TRP 344 337 337 TRP TRP A . n A 1 345 ARG 345 338 338 ARG ARG A . n A 1 346 SER 346 339 339 SER SER A . n A 1 347 THR 347 340 340 THR THR A . n A 1 348 GLU 348 341 341 GLU GLU A . n A 1 349 PRO 349 342 342 PRO PRO A . n A 1 350 LEU 350 343 343 LEU LEU A . n A 1 351 ASP 351 344 344 ASP ASP A . n A 1 352 ILE 352 345 345 ILE ILE A . n A 1 353 PRO 353 346 346 PRO PRO A . n A 1 354 GLU 354 347 347 GLU GLU A . n A 1 355 THR 355 348 348 THR THR A . n A 1 356 LEU 356 349 349 LEU LEU A . n A 1 357 ARG 357 350 350 ARG ARG A . n A 1 358 GLY 358 351 351 GLY GLY A . n A 1 359 VAL 359 352 352 VAL VAL A . n A 1 360 ILE 360 353 353 ILE ILE A . n A 1 361 THR 361 354 354 THR THR A . n A 1 362 THR 362 355 355 THR THR A . n A 1 363 GLN 363 356 356 GLN GLN A . n A 1 364 SER 364 357 357 SER SER A . n A 1 365 ALA 365 358 358 ALA ALA A . n A 1 366 GLU 366 359 359 GLU GLU A . n A 1 367 ARG 367 360 360 ARG ARG A . n A 1 368 THR 368 361 361 THR THR A . n A 1 369 VAL 369 362 362 VAL VAL A . n A 1 370 GLY 370 363 363 GLY GLY A . n A 1 371 SER 371 364 364 SER SER A . n A 1 372 ILE 372 365 365 ILE ILE A . n A 1 373 VAL 373 366 366 VAL VAL A . n A 1 374 VAL 374 367 367 VAL VAL A . n A 1 375 PRO 375 368 368 PRO PRO A . n A 1 376 HIS 376 369 369 HIS HIS A . n A 1 377 ARG 377 370 370 ARG ARG A . n A 1 378 ILE 378 371 371 ILE ILE A . n A 1 379 GLU 379 372 372 GLU GLU A . n A 1 380 GLN 380 373 373 GLN GLN A . n A 1 381 ARG 381 374 374 ARG ARG A . n A 1 382 VAL 382 375 375 VAL VAL A . n A 1 383 HIS 383 376 376 HIS HIS A . n A 1 384 HIS 384 377 377 HIS HIS A . n A 1 385 HIS 385 378 378 HIS HIS A . n A 1 386 ALA 386 379 379 ALA ALA A . n A 1 387 THR 387 380 380 THR THR A . n A 1 388 VAL 388 381 381 VAL VAL A . n A 1 389 ALA 389 382 382 ALA ALA A . n A 1 390 SER 390 383 383 SER SER A . n A 1 391 HIS 391 384 384 HIS HIS A . n A 1 392 ARG 392 385 385 ARG ARG A . n A 1 393 ASP 393 386 386 ASP ASP A . n A 1 394 LEU 394 387 387 LEU LEU A . n A 1 395 ALA 395 388 388 ALA ALA A . n A 1 396 VAL 396 389 389 VAL VAL A . n A 1 397 ASP 397 390 390 ASP ASP A . n A 1 398 SER 398 391 391 SER SER A . n A 1 399 ILE 399 392 392 ILE ILE A . n A 1 400 ARG 400 393 393 ARG ARG A . n A 1 401 ASP 401 394 394 ASP ASP A . n A 1 402 THR 402 395 395 THR THR A . n A 1 403 LEU 403 396 396 LEU LEU A . n A 1 404 VAL 404 397 397 VAL VAL A . n A 1 405 ALA 405 398 398 ALA ALA A . n A 1 406 TRP 406 399 399 TRP TRP A . n A 1 407 LEU 407 400 400 LEU LEU A . n A 1 408 THR 408 401 401 THR THR A . n A 1 409 GLU 409 402 402 GLU GLU A . n A 1 410 HIS 410 403 403 HIS HIS A . n A 1 411 GLY 411 404 404 GLY GLY A . n A 1 412 PRO 412 405 405 PRO PRO A . n A 1 413 GLN 413 406 406 GLN GLN A . n A 1 414 PRO 414 407 407 PRO PRO A . n A 1 415 HIS 415 408 408 HIS HIS A . n A 1 416 PRO 416 409 409 PRO PRO A . n A 1 417 TYR 417 410 410 TYR TYR A . n A 1 418 ASP 418 411 411 ASP ASP A . n A 1 419 GLY 419 412 412 GLY GLY A . n A 1 420 ASP 420 413 413 ASP ASP A . n A 1 421 PRO 421 414 414 PRO PRO A . n A 1 422 ILE 422 415 415 ILE ILE A . n A 1 423 THR 423 416 416 THR THR A . n A 1 424 ALA 424 417 417 ALA ALA A . n A 1 425 ALA 425 418 418 ALA ALA A . n A 1 426 SER 426 419 419 SER SER A . n A 1 427 VAL 427 420 420 VAL VAL A . n A 1 428 GLN 428 421 421 GLN GLN A . n A 1 429 ARG 429 422 422 ARG ARG A . n A 1 430 TRP 430 423 423 TRP TRP A . n A 1 431 LYS 431 424 424 LYS LYS A . n A 1 432 ALA 432 425 425 ALA ALA A . n A 1 433 PRO 433 426 426 PRO PRO A . n A 1 434 ARG 434 427 427 ARG ARG A . n A 1 435 ARG 435 428 428 ARG ARG A . n A 1 436 PHE 436 429 429 PHE PHE A . n A 1 437 ALA 437 430 430 ALA ALA A . n A 1 438 TRP 438 431 431 TRP TRP A . n A 1 439 LEU 439 432 432 LEU LEU A . n A 1 440 ALA 440 433 433 ALA ALA A . n A 1 441 LEU 441 434 434 LEU LEU A . n A 1 442 GLN 442 435 435 GLN GLN A . n A 1 443 TRP 443 436 436 TRP TRP A . n A 1 444 ARG 444 437 437 ARG ARG A . n A 1 445 ASP 445 438 438 ASP ASP A . n A 1 446 THR 446 439 439 THR THR A . n A 1 447 PRO 447 440 440 PRO PRO A . n A 1 448 PRO 448 441 441 PRO PRO A . n A 1 449 PRO 449 442 442 PRO PRO A . n A 1 450 GLU 450 443 443 GLU GLU A . n A 1 451 GLY 451 444 444 GLY GLY A . n A 1 452 ALA 452 445 445 ALA ALA A . n A 1 453 ASP 453 446 446 ASP ASP A . n A 1 454 ILE 454 447 447 ILE ILE A . n A 1 455 ALA 455 448 448 ALA ALA A . n A 1 456 GLU 456 449 449 GLU GLU A . n A 1 457 THR 457 450 450 THR THR A . n A 1 458 LEU 458 451 451 LEU LEU A . n A 1 459 GLU 459 452 452 GLU GLU A . n A 1 460 ALA 460 453 453 ALA ALA A . n A 1 461 TRP 461 454 454 TRP TRP A . n A 1 462 ARG 462 455 455 ARG ARG A . n A 1 463 ARG 463 456 456 ARG ARG A . n A 1 464 ALA 464 457 457 ALA ALA A . n A 1 465 ASP 465 458 458 ASP ASP A . n A 1 466 LYS 466 459 459 LYS LYS A . n A 1 467 LYS 467 460 460 LYS LYS A . n A 1 468 LEU 468 461 461 LEU LEU A . n A 1 469 TRP 469 462 462 TRP TRP A . n A 1 470 LEU 470 463 463 LEU LEU A . n A 1 471 GLU 471 464 464 GLU GLU A . n A 1 472 SER 472 465 465 SER SER A . n A 1 473 GLU 473 466 466 GLU GLU A . n A 1 474 HIS 474 467 467 HIS HIS A . n A 1 475 GLY 475 468 468 GLY GLY A . n A 1 476 ARG 476 469 469 ARG ARG A . n A 1 477 GLY 477 470 470 GLY GLY A . n A 1 478 ARG 478 471 471 ARG ARG A . n A 1 479 ALA 479 472 472 ALA ALA A . n A 1 480 LEU 480 473 473 LEU LEU A . n A 1 481 ARG 481 474 474 ARG ARG A . n A 1 482 HIS 482 475 475 HIS HIS A . n A 1 483 ARG 483 476 476 ARG ARG A . n A 1 484 THR 484 477 477 THR THR A . n A 1 485 ASP 485 478 478 ASP ASP A . n A 1 486 LEU 486 479 479 LEU LEU A . n A 1 487 HIS 487 480 480 HIS HIS A . n A 1 488 ARG 488 481 481 ARG ARG A . n A 1 489 GLN 489 482 482 GLN GLN A . n A 1 490 VAL 490 483 483 VAL VAL A . n A 1 491 ALA 491 484 484 ALA ALA A . n A 1 492 ALA 492 485 485 ALA ALA A . n A 1 493 TYR 493 486 486 TYR TYR A . n A 1 494 PHE 494 487 487 PHE PHE A . n A 1 495 ALA 495 488 488 ALA ALA A . n A 1 496 GLY 496 489 489 GLY GLY A . n A 1 497 VAL 497 490 490 VAL VAL A . n A 1 498 ALA 498 491 491 ALA ALA A . n A 1 499 GLY 499 492 492 GLY GLY A . n A 1 500 ARG 500 493 493 ARG ARG A . n A 1 501 ILE 501 494 494 ILE ILE A . n A 1 502 VAL 502 495 495 VAL VAL A . n A 1 503 VAL 503 496 496 VAL VAL A . n A 1 504 ASP 504 497 497 ASP ASP A . n A 1 505 ASP 505 498 498 ASP ASP A . n A 1 506 SER 506 499 499 SER SER A . n A 1 507 ASP 507 500 500 ASP ASP A . n A 1 508 ILE 508 501 501 ILE ILE A . n A 1 509 ALA 509 502 502 ALA ALA A . n A 1 510 GLN 510 503 503 GLN GLN A . n A 1 511 ILE 511 504 504 ILE ILE A . n A 1 512 ALA 512 505 505 ALA ALA A . n A 1 513 GLY 513 506 506 GLY GLY A . n A 1 514 THR 514 507 507 THR THR A . n A 1 515 ALA 515 508 508 ALA ALA A . n A 1 516 LYS 516 509 509 LYS LYS A . n A 1 517 HIS 517 510 510 HIS HIS A . n A 1 518 SER 518 511 511 SER SER A . n A 1 519 GLU 519 512 512 GLU GLU A . n A 1 520 LEU 520 513 513 LEU LEU A . n A 1 521 LEU 521 514 514 LEU LEU A . n A 1 522 THR 522 515 515 THR THR A . n A 1 523 ASP 523 516 516 ASP ASP A . n A 1 524 VAL 524 517 517 VAL VAL A . n A 1 525 ASP 525 518 518 ASP ASP A . n A 1 526 ARG 526 519 519 ARG ARG A . n A 1 527 GLN 527 520 520 GLN GLN A . n A 1 528 ILE 528 521 521 ILE ILE A . n A 1 529 ALA 529 522 522 ALA ALA A . n A 1 530 ARG 530 523 523 ARG ARG A . n A 1 531 ARG 531 524 524 ARG ARG A . n A 1 532 ARG 532 525 525 ARG ARG A . n A 1 533 ALA 533 526 526 ALA ALA A . n A 1 534 ILE 534 527 527 ILE ILE A . n A 1 535 ALA 535 528 528 ALA ALA A . n A 1 536 ALA 536 529 529 ALA ALA A . n A 1 537 PRO 537 530 530 PRO PRO A . n A 1 538 GLY 538 531 531 GLY GLY A . n A 1 539 MET 539 532 532 MET MET A . n A 1 540 LEU 540 533 533 LEU LEU A . n A 1 541 ARG 541 534 534 ARG ARG A . n A 1 542 ALA 542 535 535 ALA ALA A . n A 1 543 ALA 543 536 536 ALA ALA A . n A 1 544 ILE 544 537 537 ILE ILE A . n A 1 545 VAL 545 538 538 VAL VAL A . n A 1 546 ALA 546 539 539 ALA ALA A . n A 1 547 ALA 547 540 540 ALA ALA A . n A 1 548 ALA 548 541 541 ALA ALA A . n A 1 549 THR 549 542 542 THR THR A . n A 1 550 ARG 550 543 543 ARG ARG A . n A 1 551 ASP 551 544 544 ASP ASP A . n A 1 552 GLU 552 545 545 GLU GLU A . n A 1 553 VAL 553 546 546 VAL VAL A . n A 1 554 PRO 554 547 547 PRO PRO A . n A 1 555 THR 555 548 548 THR THR A . n A 1 556 THR 556 549 549 THR THR A . n A 1 557 THR 557 550 550 THR THR A . n A 1 558 VAL 558 551 551 VAL VAL A . n A 1 559 SER 559 552 552 SER SER A . n A 1 560 HIS 560 553 553 HIS HIS A . n A 1 561 THR 561 554 554 THR THR A . n A 1 562 GLY 562 555 555 GLY GLY A . n A 1 563 LEU 563 556 556 LEU LEU A . n A 1 564 SER 564 557 557 SER SER A . n A 1 565 ARG 565 558 558 ARG ARG A . n A 1 566 VAL 566 559 559 VAL VAL A . n A 1 567 HIS 567 560 560 HIS HIS A . n A 1 568 ALA 568 561 561 ALA ALA A . n A 1 569 ALA 569 562 562 ALA ALA A . n A 1 570 CYS 570 563 563 CYS CYS A . n A 1 571 GLY 571 564 564 GLY GLY A . n A 1 572 HIS 572 565 565 HIS HIS A . n A 1 573 GLU 573 566 566 GLU GLU A . n A 1 574 ASN 574 567 567 ASN ASN A . n A 1 575 PRO 575 568 568 PRO PRO A . n A 1 576 ALA 576 569 569 ALA ALA A . n A 1 577 ASP 577 570 570 ASP ASP A . n A 1 578 ASP 578 571 571 ASP ASP A . n A 1 579 ARG 579 572 572 ARG ARG A . n A 1 580 TYR 580 573 573 TYR TYR A . n A 1 581 LEU 581 574 574 LEU LEU A . n A 1 582 MET 582 575 575 MET MET A . n A 1 583 GLN 583 576 576 GLN GLN A . n A 1 584 PRO 584 577 577 PRO PRO A . n A 1 585 VAL 585 578 578 VAL VAL A . n A 1 586 LEU 586 579 579 LEU LEU A . n A 1 587 CYS 587 580 580 CYS CYS A . n A 1 588 ASP 588 581 581 ASP ASP A . n A 1 589 GLY 589 582 582 GLY GLY A . n A 1 590 CYS 590 583 583 CYS CYS A . n A 1 591 GLY 591 584 584 GLY GLY A . n A 1 592 ARG 592 585 585 ARG ARG A . n A 1 593 THR 593 586 586 THR THR A . n A 1 594 TYR 594 587 587 TYR TYR A . n A 1 595 ASP 595 588 588 ASP ASP A . n A 1 596 THR 596 589 589 THR THR A . n A 1 597 ASP 597 590 590 ASP ASP A . n A 1 598 LEU 598 591 591 LEU LEU A . n A 1 599 SER 599 592 592 SER SER A . n A 1 600 ALA 600 593 593 ALA ALA A . n A 1 601 THR 601 594 594 THR THR A . n A 1 602 ILE 602 595 595 ILE ILE A . n A 1 603 LEU 603 596 596 LEU LEU A . n A 1 604 MET 604 597 597 MET MET A . n A 1 605 LEU 605 598 598 LEU LEU A . n A 1 606 GLN 606 599 599 GLN GLN A . n A 1 607 ARG 607 600 600 ARG ARG A . n A 1 608 ALA 608 601 601 ALA ALA A . n A 1 609 SER 609 602 602 SER SER A . n A 1 610 ALA 610 603 603 ALA ALA A . n A 1 611 ALA 611 604 604 ALA ALA A . n A 1 612 THR 612 605 ? ? ? A . n A 1 613 SER 613 606 ? ? ? A . n A 1 614 ASN 614 607 ? ? ? A . n B 2 1 G 1 -37 ? ? ? B . n B 2 2 G 2 -36 ? ? ? B . n B 2 3 G 3 -35 ? ? ? B . n B 2 4 U 4 -34 ? ? ? B . n B 2 5 G 5 -33 ? ? ? B . n B 2 6 U 6 -32 ? ? ? B . n B 2 7 C 7 -31 -31 C C B . n B 2 8 A 8 -30 -30 A A B . n B 2 9 A 9 -29 -29 A A B . n B 2 10 C 10 -28 -28 C C B . n B 2 11 G 11 -27 -27 G G B . n B 2 12 C 12 -26 -26 C C B . n B 2 13 C 13 -25 -25 C C B . n B 2 14 A 14 -24 -24 A A B . n B 2 15 G 15 -23 -23 G G B . n B 2 16 C 16 -22 -22 C C B . n B 2 17 G 17 -21 -21 G G B . n B 2 18 C 18 -20 -20 C C B . n B 2 19 G 19 -19 -19 G G B . n B 2 20 G 20 -18 -18 G G B . n B 2 21 A 21 -17 -17 A A B . n B 2 22 G 22 -16 -16 G G B . n B 2 23 G 23 -15 -15 G G B . n B 2 24 C 24 -14 -14 C C B . n B 2 25 G 25 -13 -13 G G B . n B 2 26 U 26 -12 -12 U U B . n B 2 27 C 27 -11 -11 C C B . n B 2 28 A 28 -10 -10 A A B . n B 2 29 A 29 -9 -9 A A B . n B 2 30 A 30 -8 -8 A A B . n B 2 31 U 31 -7 -7 U U B . n B 2 32 C 32 -6 -6 C C B . n B 2 33 C 33 -5 -5 C C B . n B 2 34 G 34 -4 -4 G G B . n B 2 35 C 35 -3 -3 C C B . n B 2 36 G 36 -2 -2 G G B . n B 2 37 A 37 -1 -1 A A B . n B 2 38 C 38 0 0 C C B . n B 2 39 A 39 1 1 A A B . n B 2 40 G 40 2 2 G G B . n B 2 41 U 41 3 3 U U B . n B 2 42 U 42 4 4 U U B . n B 2 43 G 43 5 5 G G B . n B 2 44 A 44 6 6 A A B . n B 2 45 C 45 7 7 C C B . n B 2 46 C 46 8 8 C C B . n B 2 47 C 47 9 9 C C B . n B 2 48 A 48 10 10 A A B . n B 2 49 A 49 11 11 A A B . n B 2 50 C 50 12 12 C C B . n B 2 51 G 51 13 13 G G B . n B 2 52 U 52 14 14 U U B . n B 2 53 C 53 15 15 C C B . n B 2 54 G 54 16 16 G G B . n B 2 55 C 55 17 17 C C B . n B 2 56 C 56 18 18 C C B . n B 2 57 G 57 19 19 G G B . n B 2 58 G 58 20 20 G G B . n C 3 1 DC 1 -20 ? ? ? C . n C 3 2 DC 2 -19 -19 DC DC C . n C 3 3 DG 3 -18 -18 DG DG C . n C 3 4 DG 4 -17 -17 DG DG C . n C 3 5 DC 5 -16 -16 DC DC C . n C 3 6 DG 6 -15 -15 DG DG C . n C 3 7 DA 7 -14 -14 DA DA C . n C 3 8 DC 8 -13 -13 DC DC C . n C 3 9 DG 9 -12 -12 DG DG C . n C 3 10 DT 10 -11 -11 DT DT C . n C 3 11 DT 11 -10 -10 DT DT C . n C 3 12 DG 12 -9 -9 DG DG C . n C 3 13 DG 13 -8 -8 DG DG C . n C 3 14 DG 14 -7 -7 DG DG C . n C 3 15 DT 15 -6 -6 DT DT C . n C 3 16 DC 16 -5 -5 DC DC C . n C 3 17 DA 17 -4 -4 DA DA C . n C 3 18 DA 18 -3 -3 DA DA C . n C 3 19 DC 19 -2 -2 DC DC C . n C 3 20 DT 20 -1 -1 DT DT C . n C 3 21 DG 21 0 0 DG DG C . n C 3 22 DA 22 1 1 DA DA C . n C 3 23 DA 23 2 2 DA DA C . n C 3 24 DA 24 3 3 DA DA C . n C 3 25 DT 25 4 4 DT DT C . n C 3 26 DG 26 5 5 DG DG C . n C 3 27 DT 27 6 6 DT DT C . n C 3 28 DC 28 7 7 DC DC C . n C 3 29 DT 29 8 ? ? ? C . n C 3 30 DG 30 9 ? ? ? C . n C 3 31 DT 31 10 ? ? ? C . n C 3 32 DT 32 11 ? ? ? C . n C 3 33 DT 33 12 ? ? ? C . n C 3 34 DC 34 13 ? ? ? C . n C 3 35 DT 35 14 ? ? ? C . n C 3 36 DC 36 15 ? ? ? C . n C 3 37 DA 37 16 ? ? ? C . n C 3 38 DA 38 17 ? ? ? C . n C 3 39 DC 39 18 ? ? ? C . n C 3 40 DA 40 19 ? ? ? C . n C 3 41 DA 41 20 ? ? ? C . n C 3 42 DA 42 21 ? ? ? C . n C 3 43 DA 43 22 ? ? ? C . n C 3 44 DA 44 23 ? ? ? C . n D 4 1 DC 1 -33 ? ? ? D . n D 4 2 DC 2 -32 ? ? ? D . n D 4 3 DG 3 -31 ? ? ? D . n D 4 4 DG 4 -30 ? ? ? D . n D 4 5 DC 5 -29 ? ? ? D . n D 4 6 DG 6 -28 ? ? ? D . n D 4 7 DA 7 -27 ? ? ? D . n D 4 8 DC 8 -26 ? ? ? D . n D 4 9 DG 9 -25 ? ? ? D . n D 4 10 DT 10 -24 ? ? ? D . n D 4 11 DT 11 -23 ? ? ? D . n D 4 12 DG 12 -22 ? ? ? D . n D 4 13 DG 13 -21 ? ? ? D . n D 4 14 DG 14 -20 ? ? ? D . n D 4 15 DT 15 -19 ? ? ? D . n D 4 16 DC 16 -18 ? ? ? D . n D 4 17 DA 17 -17 ? ? ? D . n D 4 18 DA 18 -16 ? ? ? D . n D 4 19 DC 19 -15 ? ? ? D . n D 4 20 DT 20 -14 ? ? ? D . n D 4 21 DG 21 -13 ? ? ? D . n D 4 22 DA 22 -12 ? ? ? D . n D 4 23 DA 23 -11 ? ? ? D . n D 4 24 DA 24 -10 ? ? ? D . n D 4 25 DC 25 -9 ? ? ? D . n D 4 26 DA 26 -8 ? ? ? D . n D 4 27 DG 27 -7 -7 DG DG D . n D 4 28 DA 28 -6 -6 DA DA D . n D 4 29 DC 29 -5 -5 DC DC D . n D 4 30 DA 30 -4 -4 DA DA D . n D 4 31 DT 31 -3 -3 DT DT D . n D 4 32 DT 32 -2 -2 DT DT D . n D 4 33 DT 33 -1 -1 DT DT D . n D 4 34 DC 34 0 0 DC DC D . n D 4 35 DT 35 1 1 DT DT D . n D 4 36 DC 36 2 2 DC DC D . n D 4 37 DA 37 3 3 DA DA D . n D 4 38 DA 38 4 4 DA DA D . n D 4 39 DC 39 5 5 DC DC D . n D 4 40 DA 40 6 6 DA DA D . n D 4 41 DA 41 7 7 DA DA D . n D 4 42 DA 42 8 8 DA DA D . n D 4 43 DA 43 9 9 DA DA D . n D 4 44 DA 44 10 ? ? ? D . n # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A THR 2 ? OG1 ? A THR 9 OG1 2 1 Y 1 A THR 2 ? CG2 ? A THR 9 CG2 3 1 Y 1 A GLU 60 ? CG ? A GLU 67 CG 4 1 Y 1 A GLU 60 ? CD ? A GLU 67 CD 5 1 Y 1 A GLU 60 ? OE1 ? A GLU 67 OE1 6 1 Y 1 A GLU 60 ? OE2 ? A GLU 67 OE2 7 1 Y 1 A GLU 65 ? CG ? A GLU 72 CG 8 1 Y 1 A GLU 65 ? CD ? A GLU 72 CD 9 1 Y 1 A GLU 65 ? OE1 ? A GLU 72 OE1 10 1 Y 1 A GLU 65 ? OE2 ? A GLU 72 OE2 11 1 Y 1 A GLU 68 ? CG ? A GLU 75 CG 12 1 Y 1 A GLU 68 ? CD ? A GLU 75 CD 13 1 Y 1 A GLU 68 ? OE1 ? A GLU 75 OE1 14 1 Y 1 A GLU 68 ? OE2 ? A GLU 75 OE2 15 1 Y 1 A GLN 96 ? CG ? A GLN 103 CG 16 1 Y 1 A GLN 96 ? CD ? A GLN 103 CD 17 1 Y 1 A GLN 96 ? OE1 ? A GLN 103 OE1 18 1 Y 1 A GLN 96 ? NE2 ? A GLN 103 NE2 19 1 Y 1 A GLU 99 ? CG ? A GLU 106 CG 20 1 Y 1 A GLU 99 ? CD ? A GLU 106 CD 21 1 Y 1 A GLU 99 ? OE1 ? A GLU 106 OE1 22 1 Y 1 A GLU 99 ? OE2 ? A GLU 106 OE2 23 1 Y 1 A ASP 120 ? CG ? A ASP 127 CG 24 1 Y 1 A ASP 120 ? OD1 ? A ASP 127 OD1 25 1 Y 1 A ASP 120 ? OD2 ? A ASP 127 OD2 26 1 Y 1 A GLU 121 ? CG ? A GLU 128 CG 27 1 Y 1 A GLU 121 ? CD ? A GLU 128 CD 28 1 Y 1 A GLU 121 ? OE1 ? A GLU 128 OE1 29 1 Y 1 A GLU 121 ? OE2 ? A GLU 128 OE2 30 1 Y 1 A THR 123 ? OG1 ? A THR 130 OG1 31 1 Y 1 A THR 123 ? CG2 ? A THR 130 CG2 32 1 Y 1 A GLU 124 ? CG ? A GLU 131 CG 33 1 Y 1 A GLU 124 ? CD ? A GLU 131 CD 34 1 Y 1 A GLU 124 ? OE1 ? A GLU 131 OE1 35 1 Y 1 A GLU 124 ? OE2 ? A GLU 131 OE2 36 1 Y 1 A GLU 132 ? CG ? A GLU 139 CG 37 1 Y 1 A GLU 132 ? CD ? A GLU 139 CD 38 1 Y 1 A GLU 132 ? OE1 ? A GLU 139 OE1 39 1 Y 1 A GLU 132 ? OE2 ? A GLU 139 OE2 40 1 Y 1 A ASP 230 ? CG ? A ASP 237 CG 41 1 Y 1 A ASP 230 ? OD1 ? A ASP 237 OD1 42 1 Y 1 A ASP 230 ? OD2 ? A ASP 237 OD2 43 1 Y 1 A ASP 259 ? CG ? A ASP 266 CG 44 1 Y 1 A ASP 259 ? OD1 ? A ASP 266 OD1 45 1 Y 1 A ASP 259 ? OD2 ? A ASP 266 OD2 46 1 Y 1 A ASP 280 ? CG ? A ASP 287 CG 47 1 Y 1 A ASP 280 ? OD1 ? A ASP 287 OD1 48 1 Y 1 A ASP 280 ? OD2 ? A ASP 287 OD2 49 1 Y 1 A GLN 310 ? CG ? A GLN 317 CG 50 1 Y 1 A GLN 310 ? CD ? A GLN 317 CD 51 1 Y 1 A GLN 310 ? OE1 ? A GLN 317 OE1 52 1 Y 1 A GLN 310 ? NE2 ? A GLN 317 NE2 53 1 Y 1 A GLU 312 ? CG ? A GLU 319 CG 54 1 Y 1 A GLU 312 ? CD ? A GLU 319 CD 55 1 Y 1 A GLU 312 ? OE1 ? A GLU 319 OE1 56 1 Y 1 A GLU 312 ? OE2 ? A GLU 319 OE2 57 1 Y 1 A ASP 314 ? CG ? A ASP 321 CG 58 1 Y 1 A ASP 314 ? OD1 ? A ASP 321 OD1 59 1 Y 1 A ASP 314 ? OD2 ? A ASP 321 OD2 60 1 Y 1 A GLU 315 ? CG ? A GLU 322 CG 61 1 Y 1 A GLU 315 ? CD ? A GLU 322 CD 62 1 Y 1 A GLU 315 ? OE1 ? A GLU 322 OE1 63 1 Y 1 A GLU 315 ? OE2 ? A GLU 322 OE2 64 1 Y 1 A ARG 326 ? CG ? A ARG 333 CG 65 1 Y 1 A ARG 326 ? CD ? A ARG 333 CD 66 1 Y 1 A ARG 326 ? NE ? A ARG 333 NE 67 1 Y 1 A ARG 326 ? CZ ? A ARG 333 CZ 68 1 Y 1 A ARG 326 ? NH1 ? A ARG 333 NH1 69 1 Y 1 A ARG 326 ? NH2 ? A ARG 333 NH2 70 1 Y 1 A ASP 329 ? CG ? A ASP 336 CG 71 1 Y 1 A ASP 329 ? OD1 ? A ASP 336 OD1 72 1 Y 1 A ASP 329 ? OD2 ? A ASP 336 OD2 73 1 Y 1 A GLU 341 ? CG ? A GLU 348 CG 74 1 Y 1 A GLU 341 ? CD ? A GLU 348 CD 75 1 Y 1 A GLU 341 ? OE1 ? A GLU 348 OE1 76 1 Y 1 A GLU 341 ? OE2 ? A GLU 348 OE2 77 1 Y 1 A ASP 344 ? CG ? A ASP 351 CG 78 1 Y 1 A ASP 344 ? OD1 ? A ASP 351 OD1 79 1 Y 1 A ASP 344 ? OD2 ? A ASP 351 OD2 80 1 Y 1 A GLU 359 ? CG ? A GLU 366 CG 81 1 Y 1 A GLU 359 ? CD ? A GLU 366 CD 82 1 Y 1 A GLU 359 ? OE1 ? A GLU 366 OE1 83 1 Y 1 A GLU 359 ? OE2 ? A GLU 366 OE2 84 1 Y 1 A ASP 390 ? CG ? A ASP 397 CG 85 1 Y 1 A ASP 390 ? OD1 ? A ASP 397 OD1 86 1 Y 1 A ASP 390 ? OD2 ? A ASP 397 OD2 87 1 Y 1 A HIS 408 ? CG ? A HIS 415 CG 88 1 Y 1 A HIS 408 ? ND1 ? A HIS 415 ND1 89 1 Y 1 A HIS 408 ? CD2 ? A HIS 415 CD2 90 1 Y 1 A HIS 408 ? CE1 ? A HIS 415 CE1 91 1 Y 1 A HIS 408 ? NE2 ? A HIS 415 NE2 92 1 Y 1 A ASP 413 ? CG ? A ASP 420 CG 93 1 Y 1 A ASP 413 ? OD1 ? A ASP 420 OD1 94 1 Y 1 A ASP 413 ? OD2 ? A ASP 420 OD2 95 1 Y 1 A THR 416 ? OG1 ? A THR 423 OG1 96 1 Y 1 A THR 416 ? CG2 ? A THR 423 CG2 97 1 Y 1 A ARG 422 ? CG ? A ARG 429 CG 98 1 Y 1 A ARG 422 ? CD ? A ARG 429 CD 99 1 Y 1 A ARG 422 ? NE ? A ARG 429 NE 100 1 Y 1 A ARG 422 ? CZ ? A ARG 429 CZ 101 1 Y 1 A ARG 422 ? NH1 ? A ARG 429 NH1 102 1 Y 1 A ARG 422 ? NH2 ? A ARG 429 NH2 103 1 Y 1 A ASP 438 ? CG ? A ASP 445 CG 104 1 Y 1 A ASP 438 ? OD1 ? A ASP 445 OD1 105 1 Y 1 A ASP 438 ? OD2 ? A ASP 445 OD2 106 1 Y 1 A GLU 512 ? CG ? A GLU 519 CG 107 1 Y 1 A GLU 512 ? CD ? A GLU 519 CD 108 1 Y 1 A GLU 512 ? OE1 ? A GLU 519 OE1 109 1 Y 1 A GLU 512 ? OE2 ? A GLU 519 OE2 110 1 Y 1 A ASP 571 ? CG ? A ASP 578 CG 111 1 Y 1 A ASP 571 ? OD1 ? A ASP 578 OD1 112 1 Y 1 A ASP 571 ? OD2 ? A ASP 578 OD2 113 1 Y 1 A ARG 572 ? CG ? A ARG 579 CG 114 1 Y 1 A ARG 572 ? CD ? A ARG 579 CD 115 1 Y 1 A ARG 572 ? NE ? A ARG 579 NE 116 1 Y 1 A ARG 572 ? CZ ? A ARG 579 CZ 117 1 Y 1 A ARG 572 ? NH1 ? A ARG 579 NH1 118 1 Y 1 A ARG 572 ? NH2 ? A ARG 579 NH2 119 1 Y 1 A LEU 574 ? CG ? A LEU 581 CG 120 1 Y 1 A LEU 574 ? CD1 ? A LEU 581 CD1 121 1 Y 1 A LEU 574 ? CD2 ? A LEU 581 CD2 122 1 Y 1 A MET 575 ? CG ? A MET 582 CG 123 1 Y 1 A MET 575 ? SD ? A MET 582 SD 124 1 Y 1 A MET 575 ? CE ? A MET 582 CE 125 1 Y 1 A ARG 585 ? CG ? A ARG 592 CG 126 1 Y 1 A ARG 585 ? CD ? A ARG 592 CD 127 1 Y 1 A ARG 585 ? NE ? A ARG 592 NE 128 1 Y 1 A ARG 585 ? CZ ? A ARG 592 CZ 129 1 Y 1 A ARG 585 ? NH1 ? A ARG 592 NH1 130 1 Y 1 A ARG 585 ? NH2 ? A ARG 592 NH2 131 1 Y 1 D DG -7 ? P ? D DG 27 P 132 1 Y 1 D DG -7 ? OP1 ? D DG 27 OP1 133 1 Y 1 D DG -7 ? OP2 ? D DG 27 OP2 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8PM4 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8PM4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8PM4 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 66.78 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8PM4 _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high . _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.0072 ? 6963 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.6340 ? 9913 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.0442 ? 1172 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.0055 ? 929 ? f_plane_restr ? ? 'ELECTRON MICROSCOPY' ? 17.6447 ? 2752 ? f_dihedral_angle_d ? ? # _struct.entry_id 8PM4 _struct.title 'Cryo-EM structure of the Cas12m-crRNA-target DNA complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8PM4 _struct_keywords.text 'Cas12, Cas12m, CRISPR-Cas, RuvC, crRNA, PAM, RNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP H5TRP0_9ACTN H5TRP0 ? 1 ;MTRVTVQTAGVHYKWQMPDQLTQQLRLAHDLREDLVTLEYEYEDAVKAVWSSYPAVAALEAQVAELDERASELASTVKEE KSRQRTKRPSHPAVAQLAETRAQLKAAKASRREAIASVRDEATERLRTISDERYAAQKQLYRDYCTDGLLYWATFNAVLD HHKTAVKRIAAHRKQGRAAQLRHHRWDGTGTISVQLQRQATDPARTPAIIADADTGKWRSSLIVPWVNPDVWDTMDRASR RKAGRVVIRMRCGSSRNPDGTKTSEWIDVPVQQHRMLPADADITAAQLTVRREGADLRATIGITAKIPDQGEVDEGPTIA VHLGWRSSDHGTVVATWRSTEPLDIPETLRGVITTQSAERTVGSIVVPHRIEQRVHHHATVASHRDLAVDSIRDTLVAWL TEHGPQPHPYDGDPITAASVQRWKAPRRFAWLALQWRDTPPPEGADIAETLEAWRRADKKLWLESEHGRGRALRHRTDLH RQVAAYFAGVAGRIVVDDSDIAQIAGTAKHSELLTDVDRQIARRRAIAAPGMLRAAIVAAATRDEVPTTTVSHTGLSRVH AACGHENPADDRYLMQPVLCDGCGRTYDTDLSATILMLQRASAATSN ; 1 2 PDB 8PM4 8PM4 ? 2 ? 1 3 PDB 8PM4 8PM4 ? 3 ? 1 4 PDB 8PM4 8PM4 ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8PM4 A 8 ? 614 ? H5TRP0 1 ? 607 ? 1 607 2 2 8PM4 B 1 ? 58 ? 8PM4 -37 ? 20 ? -37 20 3 3 8PM4 C 1 ? 44 ? 8PM4 -20 ? 23 ? -20 23 4 4 8PM4 D 1 ? 44 ? 8PM4 -33 ? 10 ? -33 10 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8PM4 SER A 1 ? UNP H5TRP0 ? ? 'expression tag' -6 1 1 8PM4 ASN A 2 ? UNP H5TRP0 ? ? 'expression tag' -5 2 1 8PM4 ALA A 3 ? UNP H5TRP0 ? ? 'expression tag' -4 3 1 8PM4 GLY A 4 ? UNP H5TRP0 ? ? 'expression tag' -3 4 1 8PM4 GLY A 5 ? UNP H5TRP0 ? ? 'expression tag' -2 5 1 8PM4 GLY A 6 ? UNP H5TRP0 ? ? 'expression tag' -1 6 1 8PM4 GLY A 7 ? UNP H5TRP0 ? ? 'expression tag' 0 7 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 25 ? TYR A 60 ? PRO A 18 TYR A 53 1 ? 36 HELX_P HELX_P2 AA2 TYR A 60 ? GLN A 91 ? TYR A 53 GLN A 84 1 ? 32 HELX_P HELX_P3 AA3 HIS A 98 ? ARG A 126 ? HIS A 91 ARG A 119 1 ? 29 HELX_P HELX_P4 AA4 ALA A 129 ? CYS A 152 ? ALA A 122 CYS A 145 1 ? 24 HELX_P HELX_P5 AA5 TYR A 158 ? GLN A 182 ? TYR A 151 GLN A 175 1 ? 25 HELX_P HELX_P6 AA6 THR A 213 ? ASP A 219 ? THR A 206 ASP A 212 1 ? 7 HELX_P HELX_P7 AA7 ASN A 235 ? MET A 242 ? ASN A 228 MET A 235 1 ? 8 HELX_P HELX_P8 AA8 ASP A 243 ? GLY A 251 ? ASP A 236 GLY A 244 1 ? 9 HELX_P HELX_P9 AA9 PRO A 353 ? ARG A 357 ? PRO A 346 ARG A 350 5 ? 5 HELX_P HELX_P10 AB1 PRO A 375 ? GLY A 411 ? PRO A 368 GLY A 404 1 ? 37 HELX_P HELX_P11 AB2 THR A 423 ? ARG A 429 ? THR A 416 ARG A 422 1 ? 7 HELX_P HELX_P12 AB3 ALA A 432 ? THR A 446 ? ALA A 425 THR A 439 1 ? 15 HELX_P HELX_P13 AB4 GLY A 451 ? ALA A 498 ? GLY A 444 ALA A 491 1 ? 48 HELX_P HELX_P14 AB5 ASP A 507 ? THR A 514 ? ASP A 500 THR A 507 1 ? 8 HELX_P HELX_P15 AB6 ALA A 515 ? SER A 518 ? ALA A 508 SER A 511 5 ? 4 HELX_P HELX_P16 AB7 LEU A 521 ? ALA A 536 ? LEU A 514 ALA A 529 1 ? 16 HELX_P HELX_P17 AB8 ALA A 536 ? ASP A 551 ? ALA A 529 ASP A 544 1 ? 16 HELX_P HELX_P18 AB9 ASP A 595 ? ALA A 611 ? ASP A 588 ALA A 604 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 570 SG ? ? ? 1_555 A CYS 587 SG ? ? A CYS 563 A CYS 580 1_555 ? ? ? ? ? ? ? 2.034 ? ? hydrog1 hydrog ? ? B C 10 N3 ? ? ? 1_555 B G 25 N1 ? ? B C -28 B G -13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B C 10 N4 ? ? ? 1_555 B G 25 O6 ? ? B C -28 B G -13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B C 10 O2 ? ? ? 1_555 B G 25 N2 ? ? B C -28 B G -13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B G 11 N1 ? ? ? 1_555 B C 24 N3 ? ? B G -27 B C -14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B G 11 N2 ? ? ? 1_555 B C 24 O2 ? ? B G -27 B C -14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B G 11 O6 ? ? ? 1_555 B C 24 N4 ? ? B G -27 B C -14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B G 11 N2 ? ? ? 1_555 B U 26 O4 ? ? B G -27 B U -12 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog8 hydrog ? ? B C 12 N3 ? ? ? 1_555 B G 23 N1 ? ? B C -26 B G -15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B C 12 N4 ? ? ? 1_555 B G 23 O6 ? ? B C -26 B G -15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B C 12 O2 ? ? ? 1_555 B G 23 N2 ? ? B C -26 B G -15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B C 13 N3 ? ? ? 1_555 B G 22 N1 ? ? B C -25 B G -16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B C 13 N4 ? ? ? 1_555 B G 22 O6 ? ? B C -25 B G -16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B C 13 O2 ? ? ? 1_555 B G 22 N2 ? ? B C -25 B G -16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B G 15 N1 ? ? ? 1_555 B A 37 N1 ? ? B G -23 B A -1 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog15 hydrog ? ? B G 15 O6 ? ? ? 1_555 B A 37 N6 ? ? B G -23 B A -1 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog16 hydrog ? ? B C 16 N3 ? ? ? 1_555 B G 36 N1 ? ? B C -22 B G -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B C 16 N4 ? ? ? 1_555 B G 36 O6 ? ? B C -22 B G -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B C 16 O2 ? ? ? 1_555 B G 36 N2 ? ? B C -22 B G -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B G 17 N1 ? ? ? 1_555 B C 35 N3 ? ? B G -21 B C -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B G 17 N2 ? ? ? 1_555 B C 35 O2 ? ? B G -21 B C -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B G 17 O6 ? ? ? 1_555 B C 35 N4 ? ? B G -21 B C -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B C 18 N3 ? ? ? 1_555 B G 34 N1 ? ? B C -20 B G -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B C 18 N4 ? ? ? 1_555 B G 34 O6 ? ? B C -20 B G -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B C 18 O2 ? ? ? 1_555 B G 34 N2 ? ? B C -20 B G -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B G 19 N1 ? ? ? 1_555 B C 33 N3 ? ? B G -19 B C -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B G 19 N2 ? ? ? 1_555 B C 33 O2 ? ? B G -19 B C -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B G 19 O6 ? ? ? 1_555 B C 33 N4 ? ? B G -19 B C -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B G 20 N2 ? ? ? 1_555 B C 32 O2 ? ? B G -18 B C -6 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog29 hydrog ? ? B A 21 N1 ? ? ? 1_555 B U 31 N3 ? ? B A -17 B U -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B A 21 N6 ? ? ? 1_555 B U 31 O4 ? ? B A -17 B U -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B G 23 N2 ? ? ? 1_555 B A 29 N3 ? ? B G -15 B A -9 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog32 hydrog ? ? B A 39 N1 ? ? ? 1_555 C DT 20 N3 ? ? B A 1 C DT -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B A 39 N6 ? ? ? 1_555 C DT 20 O4 ? ? B A 1 C DT -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B G 40 N1 ? ? ? 1_555 C DC 19 N3 ? ? B G 2 C DC -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B G 40 N2 ? ? ? 1_555 C DC 19 O2 ? ? B G 2 C DC -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B G 40 O6 ? ? ? 1_555 C DC 19 N4 ? ? B G 2 C DC -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B U 41 N3 ? ? ? 1_555 C DA 18 N1 ? ? B U 3 C DA -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B U 41 O4 ? ? ? 1_555 C DA 18 N6 ? ? B U 3 C DA -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B U 42 N3 ? ? ? 1_555 C DA 17 N1 ? ? B U 4 C DA -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B U 42 O4 ? ? ? 1_555 C DA 17 N6 ? ? B U 4 C DA -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B G 43 N1 ? ? ? 1_555 C DC 16 N3 ? ? B G 5 C DC -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B G 43 N2 ? ? ? 1_555 C DC 16 O2 ? ? B G 5 C DC -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B G 43 O6 ? ? ? 1_555 C DC 16 N4 ? ? B G 5 C DC -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B A 44 N1 ? ? ? 1_555 C DT 15 N3 ? ? B A 6 C DT -6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B A 44 N6 ? ? ? 1_555 C DT 15 O4 ? ? B A 6 C DT -6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B C 45 N3 ? ? ? 1_555 C DG 14 N1 ? ? B C 7 C DG -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B C 45 N4 ? ? ? 1_555 C DG 14 O6 ? ? B C 7 C DG -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B C 45 O2 ? ? ? 1_555 C DG 14 N2 ? ? B C 7 C DG -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B C 46 N3 ? ? ? 1_555 C DG 13 N1 ? ? B C 8 C DG -8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B C 46 N4 ? ? ? 1_555 C DG 13 O6 ? ? B C 8 C DG -8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B C 46 O2 ? ? ? 1_555 C DG 13 N2 ? ? B C 8 C DG -8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B C 47 N3 ? ? ? 1_555 C DG 12 N1 ? ? B C 9 C DG -9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B C 47 N4 ? ? ? 1_555 C DG 12 O6 ? ? B C 9 C DG -9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B C 47 O2 ? ? ? 1_555 C DG 12 N2 ? ? B C 9 C DG -9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B A 48 N1 ? ? ? 1_555 C DT 11 N3 ? ? B A 10 C DT -10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B A 48 N6 ? ? ? 1_555 C DT 11 O4 ? ? B A 10 C DT -10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B A 49 N1 ? ? ? 1_555 C DT 10 N3 ? ? B A 11 C DT -11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B A 49 N6 ? ? ? 1_555 C DT 10 O4 ? ? B A 11 C DT -11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? B C 50 N3 ? ? ? 1_555 C DG 9 N1 ? ? B C 12 C DG -12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? B C 50 N4 ? ? ? 1_555 C DG 9 O6 ? ? B C 12 C DG -12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? B C 50 O2 ? ? ? 1_555 C DG 9 N2 ? ? B C 12 C DG -12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? B G 51 N1 ? ? ? 1_555 C DC 8 N3 ? ? B G 13 C DC -13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? B G 51 N2 ? ? ? 1_555 C DC 8 O2 ? ? B G 13 C DC -13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? B G 51 O6 ? ? ? 1_555 C DC 8 N4 ? ? B G 13 C DC -13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? B U 52 N3 ? ? ? 1_555 C DA 7 N1 ? ? B U 14 C DA -14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? B U 52 O4 ? ? ? 1_555 C DA 7 N6 ? ? B U 14 C DA -14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? B C 53 N3 ? ? ? 1_555 C DG 6 N1 ? ? B C 15 C DG -15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? B C 53 N4 ? ? ? 1_555 C DG 6 O6 ? ? B C 15 C DG -15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? B C 53 O2 ? ? ? 1_555 C DG 6 N2 ? ? B C 15 C DG -15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? B G 54 N1 ? ? ? 1_555 C DC 5 N3 ? ? B G 16 C DC -16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? B G 54 N2 ? ? ? 1_555 C DC 5 O2 ? ? B G 16 C DC -16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? B G 54 O6 ? ? ? 1_555 C DC 5 N4 ? ? B G 16 C DC -16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? B C 55 N3 ? ? ? 1_555 C DG 4 N1 ? ? B C 17 C DG -17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? B C 55 N4 ? ? ? 1_555 C DG 4 O6 ? ? B C 17 C DG -17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? B C 55 O2 ? ? ? 1_555 C DG 4 N2 ? ? B C 17 C DG -17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? B C 56 N3 ? ? ? 1_555 C DG 3 N1 ? ? B C 18 C DG -18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? B C 56 N4 ? ? ? 1_555 C DG 3 O6 ? ? B C 18 C DG -18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? B C 56 O2 ? ? ? 1_555 C DG 3 N2 ? ? B C 18 C DG -18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? B G 57 N1 ? ? ? 1_555 C DC 2 N3 ? ? B G 19 C DC -19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? B G 57 N2 ? ? ? 1_555 C DC 2 O2 ? ? B G 19 C DC -19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? B G 57 O6 ? ? ? 1_555 C DC 2 N4 ? ? B G 19 C DC -19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? C DG 21 N1 ? ? ? 1_555 D DC 34 N3 ? ? C DG 0 D DC 0 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? C DG 21 N2 ? ? ? 1_555 D DC 34 O2 ? ? C DG 0 D DC 0 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? C DG 21 O6 ? ? ? 1_555 D DC 34 N4 ? ? C DG 0 D DC 0 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? C DA 22 N1 ? ? ? 1_555 D DT 33 N3 ? ? C DA 1 D DT -1 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog86 hydrog ? ? C DA 23 N1 ? ? ? 1_555 D DT 32 N3 ? ? C DA 2 D DT -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? C DA 23 N6 ? ? ? 1_555 D DT 32 O4 ? ? C DA 2 D DT -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? C DA 24 N1 ? ? ? 1_555 D DT 31 N3 ? ? C DA 3 D DT -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? C DA 24 N6 ? ? ? 1_555 D DT 31 O4 ? ? C DA 3 D DT -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? C DT 25 N3 ? ? ? 1_555 D DA 30 N1 ? ? C DT 4 D DA -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? C DT 25 O4 ? ? ? 1_555 D DA 30 N6 ? ? C DT 4 D DA -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? C DG 26 N1 ? ? ? 1_555 D DC 29 N3 ? ? C DG 5 D DC -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? C DG 26 N2 ? ? ? 1_555 D DC 29 O2 ? ? C DG 5 D DC -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? C DG 26 O6 ? ? ? 1_555 D DC 29 N4 ? ? C DG 5 D DC -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? C DT 27 N3 ? ? ? 1_555 D DA 28 N1 ? ? C DT 6 D DA -6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? C DT 27 O4 ? ? ? 1_555 D DA 28 N6 ? ? C DT 6 D DA -6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? C DC 28 N3 ? ? ? 1_555 D DG 27 N1 ? ? C DC 7 D DG -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? C DC 28 N4 ? ? ? 1_555 D DG 27 O6 ? ? C DC 7 D DG -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? C DC 28 O2 ? ? ? 1_555 D DG 27 N2 ? ? C DC 7 D DG -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLN _struct_mon_prot_cis.label_seq_id 583 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLN _struct_mon_prot_cis.auth_seq_id 576 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 584 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 577 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.66 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 6 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? parallel AA2 5 6 ? parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLY A 197 ? GLN A 202 ? GLY A 190 GLN A 195 AA1 2 ASP A 289 ? GLU A 300 ? ASP A 282 GLU A 293 AA1 3 ASP A 303 ? ILE A 314 ? ASP A 296 ILE A 307 AA1 4 ARG A 10 ? VAL A 18 ? ARG A 3 VAL A 11 AA1 5 LYS A 269 ? GLN A 279 ? LYS A 262 GLN A 272 AA1 6 ARG A 252 ? ARG A 263 ? ARG A 245 ARG A 256 AA1 7 LEU A 229 ? ILE A 230 ? LEU A 222 ILE A 223 AA2 1 ILE A 360 ? THR A 362 ? ILE A 353 THR A 355 AA2 2 VAL A 369 ? VAL A 373 ? VAL A 362 VAL A 366 AA2 3 VAL A 340 ? SER A 346 ? VAL A 333 SER A 339 AA2 4 THR A 325 ? ARG A 333 ? THR A 318 ARG A 326 AA2 5 ARG A 500 ? ASP A 504 ? ARG A 493 ASP A 497 AA2 6 THR A 555 ? VAL A 558 ? THR A 548 VAL A 551 AA3 1 VAL A 585 ? LEU A 586 ? VAL A 578 LEU A 579 AA3 2 THR A 593 ? TYR A 594 ? THR A 586 TYR A 587 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 199 ? N ILE A 192 O LEU A 295 ? O LEU A 288 AA1 2 3 N THR A 296 ? N THR A 289 O THR A 307 ? O THR A 300 AA1 3 4 O ILE A 314 ? O ILE A 307 N ARG A 10 ? N ARG A 3 AA1 4 5 N GLY A 17 ? N GLY A 10 O GLN A 279 ? O GLN A 272 AA1 5 6 O VAL A 276 ? O VAL A 269 N ILE A 255 ? N ILE A 248 AA1 6 7 O ARG A 256 ? O ARG A 249 N ILE A 230 ? N ILE A 223 AA2 1 2 N THR A 361 ? N THR A 354 O SER A 371 ? O SER A 364 AA2 2 3 O ILE A 372 ? O ILE A 365 N ALA A 342 ? N ALA A 335 AA2 3 4 O VAL A 341 ? O VAL A 334 N GLY A 331 ? N GLY A 324 AA2 4 5 N ILE A 326 ? N ILE A 319 O VAL A 502 ? O VAL A 495 AA2 5 6 N VAL A 503 ? N VAL A 496 O THR A 556 ? O THR A 549 AA3 1 2 N VAL A 585 ? N VAL A 578 O TYR A 594 ? O TYR A 587 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 87 ? ? 67.97 -5.81 2 1 ALA A 179 ? ? -163.56 119.30 3 1 ASP A 314 ? ? -143.17 18.30 4 1 TRP A 325 ? ? -143.19 43.41 5 1 ASP A 498 ? ? -96.00 54.90 6 1 HIS A 510 ? ? -98.70 32.04 7 1 ALA A 529 ? ? 56.34 70.68 8 1 ASP A 570 ? ? -93.61 59.99 # _space_group_symop.id 1 _space_group_symop.operation_xyz x,y,z # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8PM4 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id . _em_3d_fitting_list.pdb_chain_id . _em_3d_fitting_list.pdb_chain_residue_range . _em_3d_fitting_list.details ? _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name AlphaFold _em_3d_fitting_list.type 'in silico model' _em_3d_fitting_list.accession_code ? _em_3d_fitting_list.initial_refinement_model_id ? # _em_3d_reconstruction.entry_id 8PM4 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.93 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 204822 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Cas12m protein in complex with crRNA and cognate DNA, Gordonia otitidis NBRC 100426 system' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2, 3, 4' # _em_imaging.entry_id 8PM4 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS GLACIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 200 _em_imaging.illumination_mode OTHER _em_imaging.mode OTHER _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 92000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8PM4 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 95 _em_vitrification.temp ? _em_vitrification.chamber_temperature 277 _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8PM4 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8PM4 _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -6 ? A SER 1 2 1 Y 1 A ASN -5 ? A ASN 2 3 1 Y 1 A ALA -4 ? A ALA 3 4 1 Y 1 A GLY -3 ? A GLY 4 5 1 Y 1 A GLY -2 ? A GLY 5 6 1 Y 1 A GLY -1 ? A GLY 6 7 1 Y 1 A GLY 0 ? A GLY 7 8 1 Y 1 A THR 605 ? A THR 612 9 1 Y 1 A SER 606 ? A SER 613 10 1 Y 1 A ASN 607 ? A ASN 614 11 1 Y 1 B G -37 ? B G 1 12 1 Y 1 B G -36 ? B G 2 13 1 Y 1 B G -35 ? B G 3 14 1 Y 1 B U -34 ? B U 4 15 1 Y 1 B G -33 ? B G 5 16 1 Y 1 B U -32 ? B U 6 17 1 Y 1 C DC -20 ? C DC 1 18 1 Y 1 C DT 8 ? C DT 29 19 1 Y 1 C DG 9 ? C DG 30 20 1 Y 1 C DT 10 ? C DT 31 21 1 Y 1 C DT 11 ? C DT 32 22 1 Y 1 C DT 12 ? C DT 33 23 1 Y 1 C DC 13 ? C DC 34 24 1 Y 1 C DT 14 ? C DT 35 25 1 Y 1 C DC 15 ? C DC 36 26 1 Y 1 C DA 16 ? C DA 37 27 1 Y 1 C DA 17 ? C DA 38 28 1 Y 1 C DC 18 ? C DC 39 29 1 Y 1 C DA 19 ? C DA 40 30 1 Y 1 C DA 20 ? C DA 41 31 1 Y 1 C DA 21 ? C DA 42 32 1 Y 1 C DA 22 ? C DA 43 33 1 Y 1 C DA 23 ? C DA 44 34 1 Y 1 D DC -33 ? D DC 1 35 1 Y 1 D DC -32 ? D DC 2 36 1 Y 1 D DG -31 ? D DG 3 37 1 Y 1 D DG -30 ? D DG 4 38 1 Y 1 D DC -29 ? D DC 5 39 1 Y 1 D DG -28 ? D DG 6 40 1 Y 1 D DA -27 ? D DA 7 41 1 Y 1 D DC -26 ? D DC 8 42 1 Y 1 D DG -25 ? D DG 9 43 1 Y 1 D DT -24 ? D DT 10 44 1 Y 1 D DT -23 ? D DT 11 45 1 Y 1 D DG -22 ? D DG 12 46 1 Y 1 D DG -21 ? D DG 13 47 1 Y 1 D DG -20 ? D DG 14 48 1 Y 1 D DT -19 ? D DT 15 49 1 Y 1 D DC -18 ? D DC 16 50 1 Y 1 D DA -17 ? D DA 17 51 1 Y 1 D DA -16 ? D DA 18 52 1 Y 1 D DC -15 ? D DC 19 53 1 Y 1 D DT -14 ? D DT 20 54 1 Y 1 D DG -13 ? D DG 21 55 1 Y 1 D DA -12 ? D DA 22 56 1 Y 1 D DA -11 ? D DA 23 57 1 Y 1 D DA -10 ? D DA 24 58 1 Y 1 D DC -9 ? D DC 25 59 1 Y 1 D DA -8 ? D DA 26 60 1 Y 1 D DA 10 ? D DA 44 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 DA OP3 O N N 160 DA P P N N 161 DA OP1 O N N 162 DA OP2 O N N 163 DA "O5'" O N N 164 DA "C5'" C N N 165 DA "C4'" C N R 166 DA "O4'" O N N 167 DA "C3'" C N S 168 DA "O3'" O N N 169 DA "C2'" C N N 170 DA "C1'" C N R 171 DA N9 N Y N 172 DA C8 C Y N 173 DA N7 N Y N 174 DA C5 C Y N 175 DA C6 C Y N 176 DA N6 N N N 177 DA N1 N Y N 178 DA C2 C Y N 179 DA N3 N Y N 180 DA C4 C Y N 181 DA HOP3 H N N 182 DA HOP2 H N N 183 DA "H5'" H N N 184 DA "H5''" H N N 185 DA "H4'" H N N 186 DA "H3'" H N N 187 DA "HO3'" H N N 188 DA "H2'" H N N 189 DA "H2''" H N N 190 DA "H1'" H N N 191 DA H8 H N N 192 DA H61 H N N 193 DA H62 H N N 194 DA H2 H N N 195 DC OP3 O N N 196 DC P P N N 197 DC OP1 O N N 198 DC OP2 O N N 199 DC "O5'" O N N 200 DC "C5'" C N N 201 DC "C4'" C N R 202 DC "O4'" O N N 203 DC "C3'" C N S 204 DC "O3'" O N N 205 DC "C2'" C N N 206 DC "C1'" C N R 207 DC N1 N N N 208 DC C2 C N N 209 DC O2 O N N 210 DC N3 N N N 211 DC C4 C N N 212 DC N4 N N N 213 DC C5 C N N 214 DC C6 C N N 215 DC HOP3 H N N 216 DC HOP2 H N N 217 DC "H5'" H N N 218 DC "H5''" H N N 219 DC "H4'" H N N 220 DC "H3'" H N N 221 DC "HO3'" H N N 222 DC "H2'" H N N 223 DC "H2''" H N N 224 DC "H1'" H N N 225 DC H41 H N N 226 DC H42 H N N 227 DC H5 H N N 228 DC H6 H N N 229 DG OP3 O N N 230 DG P P N N 231 DG OP1 O N N 232 DG OP2 O N N 233 DG "O5'" O N N 234 DG "C5'" C N N 235 DG "C4'" C N R 236 DG "O4'" O N N 237 DG "C3'" C N S 238 DG "O3'" O N N 239 DG "C2'" C N N 240 DG "C1'" C N R 241 DG N9 N Y N 242 DG C8 C Y N 243 DG N7 N Y N 244 DG C5 C Y N 245 DG C6 C N N 246 DG O6 O N N 247 DG N1 N N N 248 DG C2 C N N 249 DG N2 N N N 250 DG N3 N N N 251 DG C4 C Y N 252 DG HOP3 H N N 253 DG HOP2 H N N 254 DG "H5'" H N N 255 DG "H5''" H N N 256 DG "H4'" H N N 257 DG "H3'" H N N 258 DG "HO3'" H N N 259 DG "H2'" H N N 260 DG "H2''" H N N 261 DG "H1'" H N N 262 DG H8 H N N 263 DG H1 H N N 264 DG H21 H N N 265 DG H22 H N N 266 DT OP3 O N N 267 DT P P N N 268 DT OP1 O N N 269 DT OP2 O N N 270 DT "O5'" O N N 271 DT "C5'" C N N 272 DT "C4'" C N R 273 DT "O4'" O N N 274 DT "C3'" C N S 275 DT "O3'" O N N 276 DT "C2'" C N N 277 DT "C1'" C N R 278 DT N1 N N N 279 DT C2 C N N 280 DT O2 O N N 281 DT N3 N N N 282 DT C4 C N N 283 DT O4 O N N 284 DT C5 C N N 285 DT C7 C N N 286 DT C6 C N N 287 DT HOP3 H N N 288 DT HOP2 H N N 289 DT "H5'" H N N 290 DT "H5''" H N N 291 DT "H4'" H N N 292 DT "H3'" H N N 293 DT "HO3'" H N N 294 DT "H2'" H N N 295 DT "H2''" H N N 296 DT "H1'" H N N 297 DT H3 H N N 298 DT H71 H N N 299 DT H72 H N N 300 DT H73 H N N 301 DT H6 H N N 302 G OP3 O N N 303 G P P N N 304 G OP1 O N N 305 G OP2 O N N 306 G "O5'" O N N 307 G "C5'" C N N 308 G "C4'" C N R 309 G "O4'" O N N 310 G "C3'" C N S 311 G "O3'" O N N 312 G "C2'" C N R 313 G "O2'" O N N 314 G "C1'" C N R 315 G N9 N Y N 316 G C8 C Y N 317 G N7 N Y N 318 G C5 C Y N 319 G C6 C N N 320 G O6 O N N 321 G N1 N N N 322 G C2 C N N 323 G N2 N N N 324 G N3 N N N 325 G C4 C Y N 326 G HOP3 H N N 327 G HOP2 H N N 328 G "H5'" H N N 329 G "H5''" H N N 330 G "H4'" H N N 331 G "H3'" H N N 332 G "HO3'" H N N 333 G "H2'" H N N 334 G "HO2'" H N N 335 G "H1'" H N N 336 G H8 H N N 337 G H1 H N N 338 G H21 H N N 339 G H22 H N N 340 GLN N N N N 341 GLN CA C N S 342 GLN C C N N 343 GLN O O N N 344 GLN CB C N N 345 GLN CG C N N 346 GLN CD C N N 347 GLN OE1 O N N 348 GLN NE2 N N N 349 GLN OXT O N N 350 GLN H H N N 351 GLN H2 H N N 352 GLN HA H N N 353 GLN HB2 H N N 354 GLN HB3 H N N 355 GLN HG2 H N N 356 GLN HG3 H N N 357 GLN HE21 H N N 358 GLN HE22 H N N 359 GLN HXT H N N 360 GLU N N N N 361 GLU CA C N S 362 GLU C C N N 363 GLU O O N N 364 GLU CB C N N 365 GLU CG C N N 366 GLU CD C N N 367 GLU OE1 O N N 368 GLU OE2 O N N 369 GLU OXT O N N 370 GLU H H N N 371 GLU H2 H N N 372 GLU HA H N N 373 GLU HB2 H N N 374 GLU HB3 H N N 375 GLU HG2 H N N 376 GLU HG3 H N N 377 GLU HE2 H N N 378 GLU HXT H N N 379 GLY N N N N 380 GLY CA C N N 381 GLY C C N N 382 GLY O O N N 383 GLY OXT O N N 384 GLY H H N N 385 GLY H2 H N N 386 GLY HA2 H N N 387 GLY HA3 H N N 388 GLY HXT H N N 389 HIS N N N N 390 HIS CA C N S 391 HIS C C N N 392 HIS O O N N 393 HIS CB C N N 394 HIS CG C Y N 395 HIS ND1 N Y N 396 HIS CD2 C Y N 397 HIS CE1 C Y N 398 HIS NE2 N Y N 399 HIS OXT O N N 400 HIS H H N N 401 HIS H2 H N N 402 HIS HA H N N 403 HIS HB2 H N N 404 HIS HB3 H N N 405 HIS HD1 H N N 406 HIS HD2 H N N 407 HIS HE1 H N N 408 HIS HE2 H N N 409 HIS HXT H N N 410 ILE N N N N 411 ILE CA C N S 412 ILE C C N N 413 ILE O O N N 414 ILE CB C N S 415 ILE CG1 C N N 416 ILE CG2 C N N 417 ILE CD1 C N N 418 ILE OXT O N N 419 ILE H H N N 420 ILE H2 H N N 421 ILE HA H N N 422 ILE HB H N N 423 ILE HG12 H N N 424 ILE HG13 H N N 425 ILE HG21 H N N 426 ILE HG22 H N N 427 ILE HG23 H N N 428 ILE HD11 H N N 429 ILE HD12 H N N 430 ILE HD13 H N N 431 ILE HXT H N N 432 LEU N N N N 433 LEU CA C N S 434 LEU C C N N 435 LEU O O N N 436 LEU CB C N N 437 LEU CG C N N 438 LEU CD1 C N N 439 LEU CD2 C N N 440 LEU OXT O N N 441 LEU H H N N 442 LEU H2 H N N 443 LEU HA H N N 444 LEU HB2 H N N 445 LEU HB3 H N N 446 LEU HG H N N 447 LEU HD11 H N N 448 LEU HD12 H N N 449 LEU HD13 H N N 450 LEU HD21 H N N 451 LEU HD22 H N N 452 LEU HD23 H N N 453 LEU HXT H N N 454 LYS N N N N 455 LYS CA C N S 456 LYS C C N N 457 LYS O O N N 458 LYS CB C N N 459 LYS CG C N N 460 LYS CD C N N 461 LYS CE C N N 462 LYS NZ N N N 463 LYS OXT O N N 464 LYS H H N N 465 LYS H2 H N N 466 LYS HA H N N 467 LYS HB2 H N N 468 LYS HB3 H N N 469 LYS HG2 H N N 470 LYS HG3 H N N 471 LYS HD2 H N N 472 LYS HD3 H N N 473 LYS HE2 H N N 474 LYS HE3 H N N 475 LYS HZ1 H N N 476 LYS HZ2 H N N 477 LYS HZ3 H N N 478 LYS HXT H N N 479 MET N N N N 480 MET CA C N S 481 MET C C N N 482 MET O O N N 483 MET CB C N N 484 MET CG C N N 485 MET SD S N N 486 MET CE C N N 487 MET OXT O N N 488 MET H H N N 489 MET H2 H N N 490 MET HA H N N 491 MET HB2 H N N 492 MET HB3 H N N 493 MET HG2 H N N 494 MET HG3 H N N 495 MET HE1 H N N 496 MET HE2 H N N 497 MET HE3 H N N 498 MET HXT H N N 499 PHE N N N N 500 PHE CA C N S 501 PHE C C N N 502 PHE O O N N 503 PHE CB C N N 504 PHE CG C Y N 505 PHE CD1 C Y N 506 PHE CD2 C Y N 507 PHE CE1 C Y N 508 PHE CE2 C Y N 509 PHE CZ C Y N 510 PHE OXT O N N 511 PHE H H N N 512 PHE H2 H N N 513 PHE HA H N N 514 PHE HB2 H N N 515 PHE HB3 H N N 516 PHE HD1 H N N 517 PHE HD2 H N N 518 PHE HE1 H N N 519 PHE HE2 H N N 520 PHE HZ H N N 521 PHE HXT H N N 522 PRO N N N N 523 PRO CA C N S 524 PRO C C N N 525 PRO O O N N 526 PRO CB C N N 527 PRO CG C N N 528 PRO CD C N N 529 PRO OXT O N N 530 PRO H H N N 531 PRO HA H N N 532 PRO HB2 H N N 533 PRO HB3 H N N 534 PRO HG2 H N N 535 PRO HG3 H N N 536 PRO HD2 H N N 537 PRO HD3 H N N 538 PRO HXT H N N 539 SER N N N N 540 SER CA C N S 541 SER C C N N 542 SER O O N N 543 SER CB C N N 544 SER OG O N N 545 SER OXT O N N 546 SER H H N N 547 SER H2 H N N 548 SER HA H N N 549 SER HB2 H N N 550 SER HB3 H N N 551 SER HG H N N 552 SER HXT H N N 553 THR N N N N 554 THR CA C N S 555 THR C C N N 556 THR O O N N 557 THR CB C N R 558 THR OG1 O N N 559 THR CG2 C N N 560 THR OXT O N N 561 THR H H N N 562 THR H2 H N N 563 THR HA H N N 564 THR HB H N N 565 THR HG1 H N N 566 THR HG21 H N N 567 THR HG22 H N N 568 THR HG23 H N N 569 THR HXT H N N 570 TRP N N N N 571 TRP CA C N S 572 TRP C C N N 573 TRP O O N N 574 TRP CB C N N 575 TRP CG C Y N 576 TRP CD1 C Y N 577 TRP CD2 C Y N 578 TRP NE1 N Y N 579 TRP CE2 C Y N 580 TRP CE3 C Y N 581 TRP CZ2 C Y N 582 TRP CZ3 C Y N 583 TRP CH2 C Y N 584 TRP OXT O N N 585 TRP H H N N 586 TRP H2 H N N 587 TRP HA H N N 588 TRP HB2 H N N 589 TRP HB3 H N N 590 TRP HD1 H N N 591 TRP HE1 H N N 592 TRP HE3 H N N 593 TRP HZ2 H N N 594 TRP HZ3 H N N 595 TRP HH2 H N N 596 TRP HXT H N N 597 TYR N N N N 598 TYR CA C N S 599 TYR C C N N 600 TYR O O N N 601 TYR CB C N N 602 TYR CG C Y N 603 TYR CD1 C Y N 604 TYR CD2 C Y N 605 TYR CE1 C Y N 606 TYR CE2 C Y N 607 TYR CZ C Y N 608 TYR OH O N N 609 TYR OXT O N N 610 TYR H H N N 611 TYR H2 H N N 612 TYR HA H N N 613 TYR HB2 H N N 614 TYR HB3 H N N 615 TYR HD1 H N N 616 TYR HD2 H N N 617 TYR HE1 H N N 618 TYR HE2 H N N 619 TYR HH H N N 620 TYR HXT H N N 621 U OP3 O N N 622 U P P N N 623 U OP1 O N N 624 U OP2 O N N 625 U "O5'" O N N 626 U "C5'" C N N 627 U "C4'" C N R 628 U "O4'" O N N 629 U "C3'" C N S 630 U "O3'" O N N 631 U "C2'" C N R 632 U "O2'" O N N 633 U "C1'" C N R 634 U N1 N N N 635 U C2 C N N 636 U O2 O N N 637 U N3 N N N 638 U C4 C N N 639 U O4 O N N 640 U C5 C N N 641 U C6 C N N 642 U HOP3 H N N 643 U HOP2 H N N 644 U "H5'" H N N 645 U "H5''" H N N 646 U "H4'" H N N 647 U "H3'" H N N 648 U "HO3'" H N N 649 U "H2'" H N N 650 U "HO2'" H N N 651 U "H1'" H N N 652 U H3 H N N 653 U H5 H N N 654 U H6 H N N 655 VAL N N N N 656 VAL CA C N S 657 VAL C C N N 658 VAL O O N N 659 VAL CB C N N 660 VAL CG1 C N N 661 VAL CG2 C N N 662 VAL OXT O N N 663 VAL H H N N 664 VAL H2 H N N 665 VAL HA H N N 666 VAL HB H N N 667 VAL HG11 H N N 668 VAL HG12 H N N 669 VAL HG13 H N N 670 VAL HG21 H N N 671 VAL HG22 H N N 672 VAL HG23 H N N 673 VAL HXT H N N 674 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 DA OP3 P sing N N 158 DA OP3 HOP3 sing N N 159 DA P OP1 doub N N 160 DA P OP2 sing N N 161 DA P "O5'" sing N N 162 DA OP2 HOP2 sing N N 163 DA "O5'" "C5'" sing N N 164 DA "C5'" "C4'" sing N N 165 DA "C5'" "H5'" sing N N 166 DA "C5'" "H5''" sing N N 167 DA "C4'" "O4'" sing N N 168 DA "C4'" "C3'" sing N N 169 DA "C4'" "H4'" sing N N 170 DA "O4'" "C1'" sing N N 171 DA "C3'" "O3'" sing N N 172 DA "C3'" "C2'" sing N N 173 DA "C3'" "H3'" sing N N 174 DA "O3'" "HO3'" sing N N 175 DA "C2'" "C1'" sing N N 176 DA "C2'" "H2'" sing N N 177 DA "C2'" "H2''" sing N N 178 DA "C1'" N9 sing N N 179 DA "C1'" "H1'" sing N N 180 DA N9 C8 sing Y N 181 DA N9 C4 sing Y N 182 DA C8 N7 doub Y N 183 DA C8 H8 sing N N 184 DA N7 C5 sing Y N 185 DA C5 C6 sing Y N 186 DA C5 C4 doub Y N 187 DA C6 N6 sing N N 188 DA C6 N1 doub Y N 189 DA N6 H61 sing N N 190 DA N6 H62 sing N N 191 DA N1 C2 sing Y N 192 DA C2 N3 doub Y N 193 DA C2 H2 sing N N 194 DA N3 C4 sing Y N 195 DC OP3 P sing N N 196 DC OP3 HOP3 sing N N 197 DC P OP1 doub N N 198 DC P OP2 sing N N 199 DC P "O5'" sing N N 200 DC OP2 HOP2 sing N N 201 DC "O5'" "C5'" sing N N 202 DC "C5'" "C4'" sing N N 203 DC "C5'" "H5'" sing N N 204 DC "C5'" "H5''" sing N N 205 DC "C4'" "O4'" sing N N 206 DC "C4'" "C3'" sing N N 207 DC "C4'" "H4'" sing N N 208 DC "O4'" "C1'" sing N N 209 DC "C3'" "O3'" sing N N 210 DC "C3'" "C2'" sing N N 211 DC "C3'" "H3'" sing N N 212 DC "O3'" "HO3'" sing N N 213 DC "C2'" "C1'" sing N N 214 DC "C2'" "H2'" sing N N 215 DC "C2'" "H2''" sing N N 216 DC "C1'" N1 sing N N 217 DC "C1'" "H1'" sing N N 218 DC N1 C2 sing N N 219 DC N1 C6 sing N N 220 DC C2 O2 doub N N 221 DC C2 N3 sing N N 222 DC N3 C4 doub N N 223 DC C4 N4 sing N N 224 DC C4 C5 sing N N 225 DC N4 H41 sing N N 226 DC N4 H42 sing N N 227 DC C5 C6 doub N N 228 DC C5 H5 sing N N 229 DC C6 H6 sing N N 230 DG OP3 P sing N N 231 DG OP3 HOP3 sing N N 232 DG P OP1 doub N N 233 DG P OP2 sing N N 234 DG P "O5'" sing N N 235 DG OP2 HOP2 sing N N 236 DG "O5'" "C5'" sing N N 237 DG "C5'" "C4'" sing N N 238 DG "C5'" "H5'" sing N N 239 DG "C5'" "H5''" sing N N 240 DG "C4'" "O4'" sing N N 241 DG "C4'" "C3'" sing N N 242 DG "C4'" "H4'" sing N N 243 DG "O4'" "C1'" sing N N 244 DG "C3'" "O3'" sing N N 245 DG "C3'" "C2'" sing N N 246 DG "C3'" "H3'" sing N N 247 DG "O3'" "HO3'" sing N N 248 DG "C2'" "C1'" sing N N 249 DG "C2'" "H2'" sing N N 250 DG "C2'" "H2''" sing N N 251 DG "C1'" N9 sing N N 252 DG "C1'" "H1'" sing N N 253 DG N9 C8 sing Y N 254 DG N9 C4 sing Y N 255 DG C8 N7 doub Y N 256 DG C8 H8 sing N N 257 DG N7 C5 sing Y N 258 DG C5 C6 sing N N 259 DG C5 C4 doub Y N 260 DG C6 O6 doub N N 261 DG C6 N1 sing N N 262 DG N1 C2 sing N N 263 DG N1 H1 sing N N 264 DG C2 N2 sing N N 265 DG C2 N3 doub N N 266 DG N2 H21 sing N N 267 DG N2 H22 sing N N 268 DG N3 C4 sing N N 269 DT OP3 P sing N N 270 DT OP3 HOP3 sing N N 271 DT P OP1 doub N N 272 DT P OP2 sing N N 273 DT P "O5'" sing N N 274 DT OP2 HOP2 sing N N 275 DT "O5'" "C5'" sing N N 276 DT "C5'" "C4'" sing N N 277 DT "C5'" "H5'" sing N N 278 DT "C5'" "H5''" sing N N 279 DT "C4'" "O4'" sing N N 280 DT "C4'" "C3'" sing N N 281 DT "C4'" "H4'" sing N N 282 DT "O4'" "C1'" sing N N 283 DT "C3'" "O3'" sing N N 284 DT "C3'" "C2'" sing N N 285 DT "C3'" "H3'" sing N N 286 DT "O3'" "HO3'" sing N N 287 DT "C2'" "C1'" sing N N 288 DT "C2'" "H2'" sing N N 289 DT "C2'" "H2''" sing N N 290 DT "C1'" N1 sing N N 291 DT "C1'" "H1'" sing N N 292 DT N1 C2 sing N N 293 DT N1 C6 sing N N 294 DT C2 O2 doub N N 295 DT C2 N3 sing N N 296 DT N3 C4 sing N N 297 DT N3 H3 sing N N 298 DT C4 O4 doub N N 299 DT C4 C5 sing N N 300 DT C5 C7 sing N N 301 DT C5 C6 doub N N 302 DT C7 H71 sing N N 303 DT C7 H72 sing N N 304 DT C7 H73 sing N N 305 DT C6 H6 sing N N 306 G OP3 P sing N N 307 G OP3 HOP3 sing N N 308 G P OP1 doub N N 309 G P OP2 sing N N 310 G P "O5'" sing N N 311 G OP2 HOP2 sing N N 312 G "O5'" "C5'" sing N N 313 G "C5'" "C4'" sing N N 314 G "C5'" "H5'" sing N N 315 G "C5'" "H5''" sing N N 316 G "C4'" "O4'" sing N N 317 G "C4'" "C3'" sing N N 318 G "C4'" "H4'" sing N N 319 G "O4'" "C1'" sing N N 320 G "C3'" "O3'" sing N N 321 G "C3'" "C2'" sing N N 322 G "C3'" "H3'" sing N N 323 G "O3'" "HO3'" sing N N 324 G "C2'" "O2'" sing N N 325 G "C2'" "C1'" sing N N 326 G "C2'" "H2'" sing N N 327 G "O2'" "HO2'" sing N N 328 G "C1'" N9 sing N N 329 G "C1'" "H1'" sing N N 330 G N9 C8 sing Y N 331 G N9 C4 sing Y N 332 G C8 N7 doub Y N 333 G C8 H8 sing N N 334 G N7 C5 sing Y N 335 G C5 C6 sing N N 336 G C5 C4 doub Y N 337 G C6 O6 doub N N 338 G C6 N1 sing N N 339 G N1 C2 sing N N 340 G N1 H1 sing N N 341 G C2 N2 sing N N 342 G C2 N3 doub N N 343 G N2 H21 sing N N 344 G N2 H22 sing N N 345 G N3 C4 sing N N 346 GLN N CA sing N N 347 GLN N H sing N N 348 GLN N H2 sing N N 349 GLN CA C sing N N 350 GLN CA CB sing N N 351 GLN CA HA sing N N 352 GLN C O doub N N 353 GLN C OXT sing N N 354 GLN CB CG sing N N 355 GLN CB HB2 sing N N 356 GLN CB HB3 sing N N 357 GLN CG CD sing N N 358 GLN CG HG2 sing N N 359 GLN CG HG3 sing N N 360 GLN CD OE1 doub N N 361 GLN CD NE2 sing N N 362 GLN NE2 HE21 sing N N 363 GLN NE2 HE22 sing N N 364 GLN OXT HXT sing N N 365 GLU N CA sing N N 366 GLU N H sing N N 367 GLU N H2 sing N N 368 GLU CA C sing N N 369 GLU CA CB sing N N 370 GLU CA HA sing N N 371 GLU C O doub N N 372 GLU C OXT sing N N 373 GLU CB CG sing N N 374 GLU CB HB2 sing N N 375 GLU CB HB3 sing N N 376 GLU CG CD sing N N 377 GLU CG HG2 sing N N 378 GLU CG HG3 sing N N 379 GLU CD OE1 doub N N 380 GLU CD OE2 sing N N 381 GLU OE2 HE2 sing N N 382 GLU OXT HXT sing N N 383 GLY N CA sing N N 384 GLY N H sing N N 385 GLY N H2 sing N N 386 GLY CA C sing N N 387 GLY CA HA2 sing N N 388 GLY CA HA3 sing N N 389 GLY C O doub N N 390 GLY C OXT sing N N 391 GLY OXT HXT sing N N 392 HIS N CA sing N N 393 HIS N H sing N N 394 HIS N H2 sing N N 395 HIS CA C sing N N 396 HIS CA CB sing N N 397 HIS CA HA sing N N 398 HIS C O doub N N 399 HIS C OXT sing N N 400 HIS CB CG sing N N 401 HIS CB HB2 sing N N 402 HIS CB HB3 sing N N 403 HIS CG ND1 sing Y N 404 HIS CG CD2 doub Y N 405 HIS ND1 CE1 doub Y N 406 HIS ND1 HD1 sing N N 407 HIS CD2 NE2 sing Y N 408 HIS CD2 HD2 sing N N 409 HIS CE1 NE2 sing Y N 410 HIS CE1 HE1 sing N N 411 HIS NE2 HE2 sing N N 412 HIS OXT HXT sing N N 413 ILE N CA sing N N 414 ILE N H sing N N 415 ILE N H2 sing N N 416 ILE CA C sing N N 417 ILE CA CB sing N N 418 ILE CA HA sing N N 419 ILE C O doub N N 420 ILE C OXT sing N N 421 ILE CB CG1 sing N N 422 ILE CB CG2 sing N N 423 ILE CB HB sing N N 424 ILE CG1 CD1 sing N N 425 ILE CG1 HG12 sing N N 426 ILE CG1 HG13 sing N N 427 ILE CG2 HG21 sing N N 428 ILE CG2 HG22 sing N N 429 ILE CG2 HG23 sing N N 430 ILE CD1 HD11 sing N N 431 ILE CD1 HD12 sing N N 432 ILE CD1 HD13 sing N N 433 ILE OXT HXT sing N N 434 LEU N CA sing N N 435 LEU N H sing N N 436 LEU N H2 sing N N 437 LEU CA C sing N N 438 LEU CA CB sing N N 439 LEU CA HA sing N N 440 LEU C O doub N N 441 LEU C OXT sing N N 442 LEU CB CG sing N N 443 LEU CB HB2 sing N N 444 LEU CB HB3 sing N N 445 LEU CG CD1 sing N N 446 LEU CG CD2 sing N N 447 LEU CG HG sing N N 448 LEU CD1 HD11 sing N N 449 LEU CD1 HD12 sing N N 450 LEU CD1 HD13 sing N N 451 LEU CD2 HD21 sing N N 452 LEU CD2 HD22 sing N N 453 LEU CD2 HD23 sing N N 454 LEU OXT HXT sing N N 455 LYS N CA sing N N 456 LYS N H sing N N 457 LYS N H2 sing N N 458 LYS CA C sing N N 459 LYS CA CB sing N N 460 LYS CA HA sing N N 461 LYS C O doub N N 462 LYS C OXT sing N N 463 LYS CB CG sing N N 464 LYS CB HB2 sing N N 465 LYS CB HB3 sing N N 466 LYS CG CD sing N N 467 LYS CG HG2 sing N N 468 LYS CG HG3 sing N N 469 LYS CD CE sing N N 470 LYS CD HD2 sing N N 471 LYS CD HD3 sing N N 472 LYS CE NZ sing N N 473 LYS CE HE2 sing N N 474 LYS CE HE3 sing N N 475 LYS NZ HZ1 sing N N 476 LYS NZ HZ2 sing N N 477 LYS NZ HZ3 sing N N 478 LYS OXT HXT sing N N 479 MET N CA sing N N 480 MET N H sing N N 481 MET N H2 sing N N 482 MET CA C sing N N 483 MET CA CB sing N N 484 MET CA HA sing N N 485 MET C O doub N N 486 MET C OXT sing N N 487 MET CB CG sing N N 488 MET CB HB2 sing N N 489 MET CB HB3 sing N N 490 MET CG SD sing N N 491 MET CG HG2 sing N N 492 MET CG HG3 sing N N 493 MET SD CE sing N N 494 MET CE HE1 sing N N 495 MET CE HE2 sing N N 496 MET CE HE3 sing N N 497 MET OXT HXT sing N N 498 PHE N CA sing N N 499 PHE N H sing N N 500 PHE N H2 sing N N 501 PHE CA C sing N N 502 PHE CA CB sing N N 503 PHE CA HA sing N N 504 PHE C O doub N N 505 PHE C OXT sing N N 506 PHE CB CG sing N N 507 PHE CB HB2 sing N N 508 PHE CB HB3 sing N N 509 PHE CG CD1 doub Y N 510 PHE CG CD2 sing Y N 511 PHE CD1 CE1 sing Y N 512 PHE CD1 HD1 sing N N 513 PHE CD2 CE2 doub Y N 514 PHE CD2 HD2 sing N N 515 PHE CE1 CZ doub Y N 516 PHE CE1 HE1 sing N N 517 PHE CE2 CZ sing Y N 518 PHE CE2 HE2 sing N N 519 PHE CZ HZ sing N N 520 PHE OXT HXT sing N N 521 PRO N CA sing N N 522 PRO N CD sing N N 523 PRO N H sing N N 524 PRO CA C sing N N 525 PRO CA CB sing N N 526 PRO CA HA sing N N 527 PRO C O doub N N 528 PRO C OXT sing N N 529 PRO CB CG sing N N 530 PRO CB HB2 sing N N 531 PRO CB HB3 sing N N 532 PRO CG CD sing N N 533 PRO CG HG2 sing N N 534 PRO CG HG3 sing N N 535 PRO CD HD2 sing N N 536 PRO CD HD3 sing N N 537 PRO OXT HXT sing N N 538 SER N CA sing N N 539 SER N H sing N N 540 SER N H2 sing N N 541 SER CA C sing N N 542 SER CA CB sing N N 543 SER CA HA sing N N 544 SER C O doub N N 545 SER C OXT sing N N 546 SER CB OG sing N N 547 SER CB HB2 sing N N 548 SER CB HB3 sing N N 549 SER OG HG sing N N 550 SER OXT HXT sing N N 551 THR N CA sing N N 552 THR N H sing N N 553 THR N H2 sing N N 554 THR CA C sing N N 555 THR CA CB sing N N 556 THR CA HA sing N N 557 THR C O doub N N 558 THR C OXT sing N N 559 THR CB OG1 sing N N 560 THR CB CG2 sing N N 561 THR CB HB sing N N 562 THR OG1 HG1 sing N N 563 THR CG2 HG21 sing N N 564 THR CG2 HG22 sing N N 565 THR CG2 HG23 sing N N 566 THR OXT HXT sing N N 567 TRP N CA sing N N 568 TRP N H sing N N 569 TRP N H2 sing N N 570 TRP CA C sing N N 571 TRP CA CB sing N N 572 TRP CA HA sing N N 573 TRP C O doub N N 574 TRP C OXT sing N N 575 TRP CB CG sing N N 576 TRP CB HB2 sing N N 577 TRP CB HB3 sing N N 578 TRP CG CD1 doub Y N 579 TRP CG CD2 sing Y N 580 TRP CD1 NE1 sing Y N 581 TRP CD1 HD1 sing N N 582 TRP CD2 CE2 doub Y N 583 TRP CD2 CE3 sing Y N 584 TRP NE1 CE2 sing Y N 585 TRP NE1 HE1 sing N N 586 TRP CE2 CZ2 sing Y N 587 TRP CE3 CZ3 doub Y N 588 TRP CE3 HE3 sing N N 589 TRP CZ2 CH2 doub Y N 590 TRP CZ2 HZ2 sing N N 591 TRP CZ3 CH2 sing Y N 592 TRP CZ3 HZ3 sing N N 593 TRP CH2 HH2 sing N N 594 TRP OXT HXT sing N N 595 TYR N CA sing N N 596 TYR N H sing N N 597 TYR N H2 sing N N 598 TYR CA C sing N N 599 TYR CA CB sing N N 600 TYR CA HA sing N N 601 TYR C O doub N N 602 TYR C OXT sing N N 603 TYR CB CG sing N N 604 TYR CB HB2 sing N N 605 TYR CB HB3 sing N N 606 TYR CG CD1 doub Y N 607 TYR CG CD2 sing Y N 608 TYR CD1 CE1 sing Y N 609 TYR CD1 HD1 sing N N 610 TYR CD2 CE2 doub Y N 611 TYR CD2 HD2 sing N N 612 TYR CE1 CZ doub Y N 613 TYR CE1 HE1 sing N N 614 TYR CE2 CZ sing Y N 615 TYR CE2 HE2 sing N N 616 TYR CZ OH sing N N 617 TYR OH HH sing N N 618 TYR OXT HXT sing N N 619 U OP3 P sing N N 620 U OP3 HOP3 sing N N 621 U P OP1 doub N N 622 U P OP2 sing N N 623 U P "O5'" sing N N 624 U OP2 HOP2 sing N N 625 U "O5'" "C5'" sing N N 626 U "C5'" "C4'" sing N N 627 U "C5'" "H5'" sing N N 628 U "C5'" "H5''" sing N N 629 U "C4'" "O4'" sing N N 630 U "C4'" "C3'" sing N N 631 U "C4'" "H4'" sing N N 632 U "O4'" "C1'" sing N N 633 U "C3'" "O3'" sing N N 634 U "C3'" "C2'" sing N N 635 U "C3'" "H3'" sing N N 636 U "O3'" "HO3'" sing N N 637 U "C2'" "O2'" sing N N 638 U "C2'" "C1'" sing N N 639 U "C2'" "H2'" sing N N 640 U "O2'" "HO2'" sing N N 641 U "C1'" N1 sing N N 642 U "C1'" "H1'" sing N N 643 U N1 C2 sing N N 644 U N1 C6 sing N N 645 U C2 O2 doub N N 646 U C2 N3 sing N N 647 U N3 C4 sing N N 648 U N3 H3 sing N N 649 U C4 O4 doub N N 650 U C4 C5 sing N N 651 U C5 C6 doub N N 652 U C5 H5 sing N N 653 U C6 H6 sing N N 654 VAL N CA sing N N 655 VAL N H sing N N 656 VAL N H2 sing N N 657 VAL CA C sing N N 658 VAL CA CB sing N N 659 VAL CA HA sing N N 660 VAL C O doub N N 661 VAL C OXT sing N N 662 VAL CB CG1 sing N N 663 VAL CB CG2 sing N N 664 VAL CB HB sing N N 665 VAL CG1 HG11 sing N N 666 VAL CG1 HG12 sing N N 667 VAL CG1 HG13 sing N N 668 VAL CG2 HG21 sing N N 669 VAL CG2 HG22 sing N N 670 VAL CG2 HG23 sing N N 671 VAL OXT HXT sing N N 672 # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 150 mM NaCl 1 'sodium chloride' 1 10 mM MgCl2 2 'magnesium chloride' 1 40 mM ? 3 Tris-HCl # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type NONE # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 1108044 _em_entity_assembly_naturalsource.organism 'Gordonia otitidis NBRC 100426' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 316385 _em_entity_assembly_recombinant.organism 'Escherichia coli str. K-12 substr. DH10B' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time 46.33 _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 29.7 _em_image_recording.details ? _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'FEI FALCON III (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 2 _em_image_recording.num_real_images 2032 # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC 4.2.1 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU 3.2 MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? 'UCSF ChimeraX' 1.3 'MODEL FITTING' ? 8 ? 1 ? Coot 0.9.8.1 OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC 4.2.1 'MODEL REFINEMENT' ? 14 ? 1 ? PHENIX 1.21rc1_4903 # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8PM4 'double helix' 8PM4 'a-form double helix' 8PM4 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B C 10 1_555 B G 25 1_555 0.145 -0.087 0.177 -7.728 -2.620 -2.184 1 B_C-28:G-13_B B -28 ? B -13 ? 19 1 1 B G 11 1_555 B C 24 1_555 -0.173 -0.203 0.356 6.631 -10.641 -1.202 2 B_G-27:C-14_B B -27 ? B -14 ? 19 1 1 B C 12 1_555 B G 23 1_555 0.256 -0.280 0.134 0.229 -9.924 -1.958 3 B_C-26:G-15_B B -26 ? B -15 ? 19 1 1 B C 13 1_555 B G 22 1_555 0.223 -0.213 0.016 1.899 -10.680 1.055 4 B_C-25:G-16_B B -25 ? B -16 ? 19 1 1 B U 31 1_555 B A 21 1_555 -0.218 -0.059 -0.984 9.556 -2.465 -1.946 5 B_U-7:A-17_B B -7 ? B -17 ? 20 1 1 B C 32 1_555 B G 20 1_555 1.101 0.520 -0.625 10.606 -15.988 12.977 6 B_C-6:G-18_B B -6 ? B -18 ? ? 1 1 B C 33 1_555 B G 19 1_555 0.340 0.007 -0.711 11.736 -9.365 7.684 7 B_C-5:G-19_B B -5 ? B -19 ? 19 1 1 B G 34 1_555 B C 18 1_555 -0.180 -0.114 0.215 -4.676 -5.559 0.984 8 B_G-4:C-20_B B -4 ? B -20 ? 19 1 1 B C 35 1_555 B G 17 1_555 0.180 -0.174 0.648 -2.924 0.769 1.055 9 B_C-3:G-21_B B -3 ? B -21 ? 19 1 1 B G 36 1_555 B C 16 1_555 -0.385 0.433 -0.523 0.545 -17.767 7.295 10 B_G-2:C-22_B B -2 ? B -22 ? 19 1 1 B A 37 1_555 B G 15 1_555 0.337 1.301 -1.260 0.567 -13.871 -10.906 11 B_A-1:G-23_B B -1 ? B -23 ? 8 1 1 B A 39 1_555 C DT 20 1_555 0.086 -0.186 -0.776 -12.039 -6.764 2.191 12 B_A1:DT-1_C B 1 ? C -1 ? 20 1 1 B G 40 1_555 C DC 19 1_555 -0.242 -0.124 -0.354 -13.477 -12.556 2.295 13 B_G2:DC-2_C B 2 ? C -2 ? 19 1 1 B U 41 1_555 C DA 18 1_555 -0.160 -0.094 -0.392 -7.549 -9.386 -4.948 14 B_U3:DA-3_C B 3 ? C -3 ? 20 1 1 B U 42 1_555 C DA 17 1_555 -0.268 -0.128 -0.405 -10.797 -10.924 4.041 15 B_U4:DA-4_C B 4 ? C -4 ? 20 1 1 B G 43 1_555 C DC 16 1_555 -1.016 0.241 -0.235 -1.619 -7.467 -2.351 16 B_G5:DC-5_C B 5 ? C -5 ? 19 1 1 B A 44 1_555 C DT 15 1_555 0.232 -0.101 0.373 0.220 -7.967 -2.669 17 B_A6:DT-6_C B 6 ? C -6 ? 20 1 1 B C 45 1_555 C DG 14 1_555 0.127 -0.251 0.520 -1.238 -8.566 -1.747 18 B_C7:DG-7_C B 7 ? C -7 ? 19 1 1 B C 46 1_555 C DG 13 1_555 0.163 -0.175 0.199 -8.663 -12.797 0.859 19 B_C8:DG-8_C B 8 ? C -8 ? 19 1 1 B C 47 1_555 C DG 12 1_555 0.138 -0.125 0.004 -10.250 -7.487 1.138 20 B_C9:DG-9_C B 9 ? C -9 ? 19 1 1 B A 48 1_555 C DT 11 1_555 0.030 -0.101 -0.141 -8.152 -8.397 2.050 21 B_A10:DT-10_C B 10 ? C -10 ? 20 1 1 B A 49 1_555 C DT 10 1_555 0.080 -0.246 -0.718 -6.567 -7.837 0.822 22 B_A11:DT-11_C B 11 ? C -11 ? 20 1 1 B C 50 1_555 C DG 9 1_555 0.231 -0.214 -0.476 1.151 -2.866 0.875 23 B_C12:DG-12_C B 12 ? C -12 ? 19 1 1 B G 51 1_555 C DC 8 1_555 -0.271 -0.177 -0.437 -3.437 -11.824 3.894 24 B_G13:DC-13_C B 13 ? C -13 ? 19 1 1 B U 52 1_555 C DA 7 1_555 -0.042 -0.076 -0.382 -0.899 -7.081 -0.071 25 B_U14:DA-14_C B 14 ? C -14 ? 20 1 1 B C 53 1_555 C DG 6 1_555 0.235 -0.065 -0.057 -1.619 -3.399 2.241 26 B_C15:DG-15_C B 15 ? C -15 ? 19 1 1 B G 54 1_555 C DC 5 1_555 -0.255 -0.224 -1.126 -14.011 -8.025 4.014 27 B_G16:DC-16_C B 16 ? C -16 ? 19 1 1 B C 55 1_555 C DG 4 1_555 0.193 -0.160 -0.102 -5.091 0.475 1.727 28 B_C17:DG-17_C B 17 ? C -17 ? 19 1 1 B C 56 1_555 C DG 3 1_555 0.209 -0.162 -0.002 -4.601 9.131 0.890 29 B_C18:DG-18_C B 18 ? C -18 ? 19 1 1 B G 57 1_555 C DC 2 1_555 -0.199 -0.173 0.255 -7.531 -7.515 -0.205 30 B_G19:DC-19_C B 19 ? C -19 ? 19 1 1 C DG 21 1_555 D DC 34 1_555 -0.229 -0.128 -0.719 -12.073 0.042 1.934 31 C_DG0:DC0_D C 0 ? D 0 ? 19 1 1 C DA 22 1_555 D DT 33 1_555 0.581 0.288 -0.521 2.341 -0.164 13.915 32 C_DA1:DT-1_D C 1 ? D -1 ? ? 1 1 C DA 23 1_555 D DT 32 1_555 0.116 -0.070 -0.301 0.119 -13.976 -1.628 33 C_DA2:DT-2_D C 2 ? D -2 ? 20 1 1 C DA 24 1_555 D DT 31 1_555 0.025 -0.170 -0.501 -4.612 -13.656 2.396 34 C_DA3:DT-3_D C 3 ? D -3 ? 20 1 1 C DT 25 1_555 D DA 30 1_555 -0.026 -0.162 -0.179 -2.097 -12.905 0.865 35 C_DT4:DA-4_D C 4 ? D -4 ? 20 1 1 C DG 26 1_555 D DC 29 1_555 -0.220 -0.123 -0.032 -5.569 -10.574 0.083 36 C_DG5:DC-5_D C 5 ? D -5 ? 19 1 1 C DT 27 1_555 D DA 28 1_555 -0.152 -0.157 0.371 -7.068 -13.093 -5.633 37 C_DT6:DA-6_D C 6 ? D -6 ? 20 1 1 C DC 28 1_555 D DG 27 1_555 0.220 -0.187 -0.320 1.692 -12.900 6.728 38 C_DC7:DG-7_D C 7 ? D -7 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B C 10 1_555 B G 25 1_555 B G 11 1_555 B C 24 1_555 -0.625 -1.449 2.862 -8.960 12.081 24.665 -5.100 -0.369 2.049 25.477 18.895 28.828 1 BB_C-28G-27:C-14G-13_BB B -28 ? B -13 ? B -27 ? B -14 ? 1 B G 11 1_555 B C 24 1_555 B C 12 1_555 B G 23 1_555 -0.339 -1.727 3.515 -2.837 2.304 37.892 -2.959 0.136 3.423 3.538 4.356 38.062 2 BB_G-27C-26:G-15C-14_BB B -27 ? B -14 ? B -26 ? B -15 ? 1 B C 12 1_555 B G 23 1_555 B C 13 1_555 B G 22 1_555 -0.325 -2.291 3.268 -1.789 4.499 27.633 -5.733 0.271 2.881 9.329 3.709 28.046 3 BB_C-26C-25:G-16G-15_BB B -26 ? B -15 ? B -25 ? B -16 ? 1 B C 13 1_555 B G 22 1_555 B U 31 1_555 B A 21 1_555 -1.723 -0.789 3.173 2.861 7.736 41.047 -1.860 2.693 2.864 10.900 -4.031 41.832 4 BB_C-25U-7:A-17G-16_BB B -25 ? B -16 ? B -7 ? B -17 ? 1 B U 31 1_555 B A 21 1_555 B C 32 1_555 B G 20 1_555 1.191 -1.472 3.477 3.501 9.257 32.746 -4.003 -1.461 3.067 15.970 -6.041 34.169 5 BB_U-7C-6:G-18A-17_BB B -7 ? B -17 ? B -6 ? B -18 ? 1 B C 32 1_555 B G 20 1_555 B C 33 1_555 B G 19 1_555 0.072 -1.556 3.347 4.505 8.724 24.397 -5.647 0.990 2.615 19.656 -10.151 26.271 6 BB_C-6C-5:G-19G-18_BB B -6 ? B -18 ? B -5 ? B -19 ? 1 B C 33 1_555 B G 19 1_555 B G 34 1_555 B C 18 1_555 -0.471 -1.830 3.391 -3.885 26.507 29.202 -5.371 0.308 1.376 42.913 6.289 39.431 7 BB_C-5G-4:C-20G-19_BB B -5 ? B -19 ? B -4 ? B -20 ? 1 B G 34 1_555 B C 18 1_555 B C 35 1_555 B G 17 1_555 0.077 -1.650 3.082 -2.269 3.428 34.253 -3.271 -0.453 2.897 5.795 3.836 34.492 8 BB_G-4C-3:G-21C-20_BB B -4 ? B -20 ? B -3 ? B -21 ? 1 B C 35 1_555 B G 17 1_555 B G 36 1_555 B C 16 1_555 0.138 -1.477 2.631 9.458 17.431 31.783 -3.933 0.667 1.613 28.615 -15.526 37.327 9 BB_C-3G-2:C-22G-21_BB B -3 ? B -21 ? B -2 ? B -22 ? 1 B G 36 1_555 B C 16 1_555 B A 37 1_555 B G 15 1_555 -0.545 -1.030 3.405 2.652 0.157 36.593 -1.658 1.241 3.355 0.249 -4.217 36.687 10 BB_G-2A-1:G-23C-22_BB B -2 ? B -22 ? B -1 ? B -23 ? 1 B A 39 1_555 C DT 20 1_555 B G 40 1_555 C DC 19 1_555 -0.160 0.281 3.634 -3.570 0.591 30.739 0.400 -0.470 3.633 1.110 6.705 30.946 11 BB_A1G2:DC-2DT-1_CC B 1 ? C -1 ? B 2 ? C -2 ? 1 B G 40 1_555 C DC 19 1_555 B U 41 1_555 C DA 18 1_555 -1.084 -0.597 3.266 -2.132 4.813 32.384 -1.880 1.555 3.209 8.559 3.791 32.798 12 BB_G2U3:DA-3DC-2_CC B 2 ? C -2 ? B 3 ? C -3 ? 1 B U 41 1_555 C DA 18 1_555 B U 42 1_555 C DA 17 1_555 1.526 -0.037 3.394 4.963 10.958 35.596 -1.591 -1.678 3.411 17.325 -7.847 37.511 13 BB_U3U4:DA-4DA-3_CC B 3 ? C -3 ? B 4 ? C -4 ? 1 B U 42 1_555 C DA 17 1_555 B G 43 1_555 C DC 16 1_555 -0.276 -0.087 3.379 -0.644 8.596 23.911 -2.753 0.437 3.162 19.937 1.494 25.397 14 BB_U4G5:DC-5DA-4_CC B 4 ? C -4 ? B 5 ? C -5 ? 1 B G 43 1_555 C DC 16 1_555 B A 44 1_555 C DT 15 1_555 -0.172 -0.298 3.302 -2.791 7.001 38.027 -1.310 -0.084 3.204 10.617 4.233 38.740 15 BB_G5A6:DT-6DC-5_CC B 5 ? C -5 ? B 6 ? C -6 ? 1 B A 44 1_555 C DT 15 1_555 B C 45 1_555 C DG 14 1_555 0.446 -1.143 3.403 1.707 4.655 32.268 -2.858 -0.491 3.229 8.314 -3.049 32.637 16 BB_A6C7:DG-7DT-6_CC B 6 ? C -6 ? B 7 ? C -7 ? 1 B C 45 1_555 C DG 14 1_555 B C 46 1_555 C DG 13 1_555 0.608 -0.890 3.282 5.664 8.515 38.082 -2.318 -0.238 3.077 12.770 -8.495 39.382 17 BB_C7C8:DG-8DG-7_CC B 7 ? C -7 ? B 8 ? C -8 ? 1 B C 46 1_555 C DG 13 1_555 B C 47 1_555 C DG 12 1_555 -0.008 -0.755 3.525 1.404 -2.718 33.712 -0.821 0.260 3.570 -4.675 -2.414 33.847 18 BB_C8C9:DG-9DG-8_CC B 8 ? C -8 ? B 9 ? C -9 ? 1 B C 47 1_555 C DG 12 1_555 B A 48 1_555 C DT 11 1_555 -0.467 -0.721 3.297 -1.958 5.997 27.785 -2.824 0.505 3.101 12.288 4.011 28.478 19 BB_C9A10:DT-10DG-9_CC B 9 ? C -9 ? B 10 ? C -10 ? 1 B A 48 1_555 C DT 11 1_555 B A 49 1_555 C DT 10 1_555 -0.573 -0.549 3.398 0.394 5.650 32.616 -1.941 1.074 3.253 9.967 -0.695 33.091 20 BB_A10A11:DT-11DT-10_CC B 10 ? C -10 ? B 11 ? C -11 ? 1 B A 49 1_555 C DT 10 1_555 B C 50 1_555 C DG 9 1_555 0.372 -0.507 3.296 -0.390 4.682 30.466 -1.862 -0.776 3.179 8.843 0.736 30.818 21 BB_A11C12:DG-12DT-11_CC B 11 ? C -11 ? B 12 ? C -12 ? 1 B C 50 1_555 C DG 9 1_555 B G 51 1_555 C DC 8 1_555 -0.212 -1.085 3.293 -2.242 27.410 27.063 -4.691 0.074 1.595 46.131 3.774 38.400 22 BB_C12G13:DC-13DG-12_CC B 12 ? C -12 ? B 13 ? C -13 ? 1 B G 51 1_555 C DC 8 1_555 B U 52 1_555 C DA 7 1_555 -0.300 -0.997 3.377 -1.659 5.455 31.204 -2.839 0.240 3.173 10.036 3.052 31.708 23 BB_G13U14:DA-14DC-13_CC B 13 ? C -13 ? B 14 ? C -14 ? 1 B U 52 1_555 C DA 7 1_555 B C 53 1_555 C DG 6 1_555 0.967 -1.551 3.536 -0.477 2.154 31.264 -3.303 -1.886 3.410 3.990 0.883 31.339 24 BB_U14C15:DG-15DA-14_CC B 14 ? C -14 ? B 15 ? C -15 ? 1 B C 53 1_555 C DG 6 1_555 B G 54 1_555 C DC 5 1_555 -0.455 -1.576 3.692 3.790 12.834 26.686 -5.787 1.689 2.591 25.841 -7.631 29.799 25 BB_C15G16:DC-16DG-15_CC B 15 ? C -15 ? B 16 ? C -16 ? 1 B G 54 1_555 C DC 5 1_555 B C 55 1_555 C DG 4 1_555 -0.304 -1.154 3.280 -6.773 2.116 34.263 -2.240 -0.519 3.206 3.545 11.345 34.969 26 BB_G16C17:DG-17DC-16_CC B 16 ? C -16 ? B 17 ? C -17 ? 1 B C 55 1_555 C DG 4 1_555 B C 56 1_555 C DG 3 1_555 0.854 -1.207 3.154 2.936 4.886 36.511 -2.532 -0.971 3.030 7.740 -4.651 36.939 27 BB_C17C18:DG-18DG-17_CC B 17 ? C -17 ? B 18 ? C -18 ? 1 B C 56 1_555 C DG 3 1_555 B G 57 1_555 C DC 2 1_555 0.373 -1.402 2.881 0.659 17.353 33.275 -3.977 -0.514 1.946 28.055 -1.065 37.420 28 BB_C18G19:DC-19DG-18_CC B 18 ? C -18 ? B 19 ? C -19 ? 1 C DG 21 1_555 D DC 34 1_555 C DA 22 1_555 D DT 33 1_555 0.322 1.059 3.289 -1.751 4.367 28.556 1.126 -1.043 3.385 8.778 3.521 28.933 29 CC_DG0DA1:DT-1DC0_DD C 0 ? D 0 ? C 1 ? D -1 ? 1 C DA 22 1_555 D DT 33 1_555 C DA 23 1_555 D DT 32 1_555 -2.065 0.390 3.236 -7.303 0.566 36.926 0.527 2.204 3.571 0.883 11.392 37.621 30 CC_DA1DA2:DT-2DT-1_DD C 1 ? D -1 ? C 2 ? D -2 ? 1 C DA 23 1_555 D DT 32 1_555 C DA 24 1_555 D DT 31 1_555 0.241 -0.087 3.365 -1.372 -0.239 38.586 -0.101 -0.539 3.356 -0.362 2.075 38.611 31 CC_DA2DA3:DT-3DT-2_DD C 2 ? D -2 ? C 3 ? D -3 ? 1 C DA 24 1_555 D DT 31 1_555 C DT 25 1_555 D DA 30 1_555 0.031 -0.335 3.256 -3.685 -1.334 33.010 -0.364 -0.669 3.244 -2.338 6.457 33.236 32 CC_DA3DT4:DA-4DT-3_DD C 3 ? D -3 ? C 4 ? D -4 ? 1 C DT 25 1_555 D DA 30 1_555 C DG 26 1_555 D DC 29 1_555 -0.027 0.458 3.446 -1.679 1.882 35.369 0.460 -0.217 3.463 3.092 2.759 35.455 33 CC_DT4DG5:DC-5DA-4_DD C 4 ? D -4 ? C 5 ? D -5 ? 1 C DG 26 1_555 D DC 29 1_555 C DT 27 1_555 D DA 28 1_555 -0.323 -0.566 3.365 -4.007 0.070 33.454 -0.988 -0.117 3.379 0.121 6.929 33.686 34 CC_DG5DT6:DA-6DC-5_DD C 5 ? D -5 ? C 6 ? D -6 ? 1 C DT 27 1_555 D DA 28 1_555 C DC 28 1_555 D DG 27 1_555 0.258 1.746 3.074 9.433 0.473 46.493 2.136 0.406 3.084 0.592 -11.807 47.390 35 CC_DT6DC7:DG-7DA-6_DD C 6 ? D -6 ? C 7 ? D -7 ? # _pdbx_audit_support.funding_organization 'Research Council of Lithuania' _pdbx_audit_support.country Lithuania _pdbx_audit_support.grant_number S-MIP-21-8 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name AlphaFold _pdbx_initial_refinement_model.accession_code ? # _space_group.crystal_system triclinic _space_group.name_H-M_alt 'P 1' _space_group.IT_number 1 _space_group.name_Hall 'P 1' _space_group.id 1 # _atom_sites.entry_id 8PM4 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_