data_8PV9 # _entry.id 8PV9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8PV9 pdb_00008pv9 10.2210/pdb8pv9/pdb WWPDB D_1292131848 ? ? EMDB EMD-17958 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Structure of DPS determined by cryoEM at 100 keV' _pdbx_database_related.db_id EMD-17958 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8PV9 _pdbx_database_status.recvd_initial_deposition_date 2023-07-17 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'McMullan, G.' 1 ? 'Naydenova, K.' 2 ? 'Mihaylov, D.' 3 ? 'Peet, M.J.' 4 ? 'Wilson, H.' 5 ? 'Yamashita, K.' 6 ? 'Dickerson, J.L.' 7 ? 'Chen, S.' 8 ? 'Cannone, G.' 9 ? 'Lee, Y.' 10 ? 'Hutchings, K.A.' 11 ? 'Gittins, O.' 12 ? 'Sobhy, M.' 13 ? 'Wells, T.' 14 ? 'El-Gomati, M.M.' 15 ? 'Dalby, J.' 16 ? 'Meffert, M.' 17 ? 'Schulze-Briese, C.' 18 ? 'Henderson, R.' 19 ? 'Russo, C.J.' 20 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 120 _citation.language ? _citation.page_first e2312905120 _citation.page_last e2312905120 _citation.title 'Structure determination by cryoEM at 100 keV.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.2312905120 _citation.pdbx_database_id_PubMed 38011573 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'McMullan, G.' 1 0000-0001-5449-8850 primary 'Naydenova, K.' 2 0000-0001-5533-5930 primary 'Mihaylov, D.' 3 ? primary 'Yamashita, K.' 4 0000-0002-5442-7582 primary 'Peet, M.J.' 5 0000-0002-0162-0063 primary 'Wilson, H.' 6 0000-0001-9411-2246 primary 'Dickerson, J.L.' 7 0000-0001-5049-4000 primary 'Chen, S.' 8 0000-0002-9472-4397 primary 'Cannone, G.' 9 0000-0002-4381-2522 primary 'Lee, Y.' 10 0000-0002-8040-3648 primary 'Hutchings, K.A.' 11 0000-0001-5760-3193 primary 'Gittins, O.' 12 0000-0002-3818-3952 primary 'Sobhy, M.A.' 13 0000-0002-1964-9497 primary 'Wells, T.' 14 0009-0009-0575-5318 primary 'El-Gomati, M.M.' 15 0000-0002-7782-6965 primary 'Dalby, J.' 16 0009-0007-9046-8609 primary 'Meffert, M.' 17 0000-0001-5637-9791 primary 'Schulze-Briese, C.' 18 0000-0002-8850-3926 primary 'Henderson, R.' 19 0000-0003-1444-0528 primary 'Russo, C.J.' 20 0000-0002-4442-744X # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8PV9 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8PV9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'DNA protection during starvation protein' _entity.formula_weight 18530.996 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 1.16.-.- _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;STAKLVKSKATNLLYTRNDVSDSEKAATVELLNRQVIQFIDLSLITKQAHWNMRGANFIAVHEMLDGFRTALIDHLDTMA ERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKELADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLWF IESNIE ; _entity_poly.pdbx_seq_one_letter_code_can ;STAKLVKSKATNLLYTRNDVSDSEKAATVELLNRQVIQFIDLSLITKQAHWNMRGANFIAVHEMLDGFRTALIDHLDTMA ERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKELADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLWF IESNIE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 THR n 1 3 ALA n 1 4 LYS n 1 5 LEU n 1 6 VAL n 1 7 LYS n 1 8 SER n 1 9 LYS n 1 10 ALA n 1 11 THR n 1 12 ASN n 1 13 LEU n 1 14 LEU n 1 15 TYR n 1 16 THR n 1 17 ARG n 1 18 ASN n 1 19 ASP n 1 20 VAL n 1 21 SER n 1 22 ASP n 1 23 SER n 1 24 GLU n 1 25 LYS n 1 26 ALA n 1 27 ALA n 1 28 THR n 1 29 VAL n 1 30 GLU n 1 31 LEU n 1 32 LEU n 1 33 ASN n 1 34 ARG n 1 35 GLN n 1 36 VAL n 1 37 ILE n 1 38 GLN n 1 39 PHE n 1 40 ILE n 1 41 ASP n 1 42 LEU n 1 43 SER n 1 44 LEU n 1 45 ILE n 1 46 THR n 1 47 LYS n 1 48 GLN n 1 49 ALA n 1 50 HIS n 1 51 TRP n 1 52 ASN n 1 53 MET n 1 54 ARG n 1 55 GLY n 1 56 ALA n 1 57 ASN n 1 58 PHE n 1 59 ILE n 1 60 ALA n 1 61 VAL n 1 62 HIS n 1 63 GLU n 1 64 MET n 1 65 LEU n 1 66 ASP n 1 67 GLY n 1 68 PHE n 1 69 ARG n 1 70 THR n 1 71 ALA n 1 72 LEU n 1 73 ILE n 1 74 ASP n 1 75 HIS n 1 76 LEU n 1 77 ASP n 1 78 THR n 1 79 MET n 1 80 ALA n 1 81 GLU n 1 82 ARG n 1 83 ALA n 1 84 VAL n 1 85 GLN n 1 86 LEU n 1 87 GLY n 1 88 GLY n 1 89 VAL n 1 90 ALA n 1 91 LEU n 1 92 GLY n 1 93 THR n 1 94 THR n 1 95 GLN n 1 96 VAL n 1 97 ILE n 1 98 ASN n 1 99 SER n 1 100 LYS n 1 101 THR n 1 102 PRO n 1 103 LEU n 1 104 LYS n 1 105 SER n 1 106 TYR n 1 107 PRO n 1 108 LEU n 1 109 ASP n 1 110 ILE n 1 111 HIS n 1 112 ASN n 1 113 VAL n 1 114 GLN n 1 115 ASP n 1 116 HIS n 1 117 LEU n 1 118 LYS n 1 119 GLU n 1 120 LEU n 1 121 ALA n 1 122 ASP n 1 123 ARG n 1 124 TYR n 1 125 ALA n 1 126 ILE n 1 127 VAL n 1 128 ALA n 1 129 ASN n 1 130 ASP n 1 131 VAL n 1 132 ARG n 1 133 LYS n 1 134 ALA n 1 135 ILE n 1 136 GLY n 1 137 GLU n 1 138 ALA n 1 139 LYS n 1 140 ASP n 1 141 ASP n 1 142 ASP n 1 143 THR n 1 144 ALA n 1 145 ASP n 1 146 ILE n 1 147 LEU n 1 148 THR n 1 149 ALA n 1 150 ALA n 1 151 SER n 1 152 ARG n 1 153 ASP n 1 154 LEU n 1 155 ASP n 1 156 LYS n 1 157 PHE n 1 158 LEU n 1 159 TRP n 1 160 PHE n 1 161 ILE n 1 162 GLU n 1 163 SER n 1 164 ASN n 1 165 ILE n 1 166 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 166 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'dps, pexB, vtm, b0812, JW0797' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DPS_ECOLI _struct_ref.pdbx_db_accession P0ABT2 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;STAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIAVHEMLDGFRTALIDHLDTMA ERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKELADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLWF IESNIE ; _struct_ref.pdbx_align_begin 2 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8PV9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 166 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0ABT2 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 167 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 167 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 8PV9 _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 26 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P0ABT2 _struct_ref_seq_dif.db_mon_id LYS _struct_ref_seq_dif.pdbx_seq_db_seq_num 27 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 27 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8PV9 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.vector[2] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[3] _struct_ncs_oper.details 1 given 1 0 0 0 0 1 0 0 0 0 1 0 ? 2 generate -0.5 -0.866025404 0 285.531946 0.866025404 -0.5 0 76.5080543 0 0 1 0 ? 3 generate -0.5 0.866025404 0 76.5080543 -0.866025404 -0.5 0 285.531946 0 0 1 0 ? 4 generate -0.5 0.288675132 0.816496582 47.6478775 -0.288675132 0.833333336 -0.471404518 111.839745 -0.816496582 -0.471404518 -0.333333336 316.330572 ? 5 generate -0.5 -0.288675132 -0.816496582 314.392122 0.288675132 0.833333336 -0.471404518 42.1651153 0.816496582 -0.471404518 -0.333333336 119.260957 ? 6 generate 0.500000004 -0.866025401 -1.1063965e-08 164.851946 -0.288675125 -0.166666675 0.942809043 61.8524531 -0.816496582 -0.471404522 -0.333333329 316.330571 ? 7 generate 0.500000004 -0.288675125 -0.816496582 193.712121 -0.866025401 -0.166666675 -0.471404522 302.194378 -1.10639654e-08 0.942809043 -0.333333329 47.1284722 ? 8 generate 0.49999999 0.288675134 0.816496588 -73.0321221 0.86602541 -0.16666666 -0.471404512 93.1704826 -1.06669434e-09 0.942809043 -0.333333329 47.128471 ? 9 generate 0.49999999 0.86602541 -1.06669401e-09 -44.1719451 0.288675134 -0.16666666 0.942809043 -7.82217787 0.816496588 -0.471404512 -0.333333329 119.260954 ? 10 generate -1.86513027e-09 -0.577350272 0.816496579 91.819824 -0.577350272 -0.666666662 -0.471404523 327.697062 0.816496579 -0.471404523 -0.333333336 119.260958 ? 11 generate 5.48605983e-09 0.577350268 -0.816496582 149.540176 0.577350268 -0.66666667 -0.471404518 188.347801 -0.816496582 -0.471404518 -0.333333336 316.330572 ? 12 generate -1 -1.56767344e-08 -1.10851251e-08 241.360003 -1.56767343e-08 0.333333329 0.942809043 -33.3248596 -1.10851253e-08 0.942809043 -0.333333329 47.1284722 ? # _struct.entry_id 8PV9 _struct.title 'Structure of DPS determined by cryoEM at 100 keV' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8PV9 _struct_keywords.text 'DNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 21 ? MET A 53 ? SER A 22 MET A 54 1 ? 33 HELX_P HELX_P2 AA2 ASN A 57 ? LEU A 86 ? ASN A 58 LEU A 87 1 ? 30 HELX_P HELX_P3 AA3 THR A 93 ? THR A 101 ? THR A 94 THR A 102 1 ? 9 HELX_P HELX_P4 AA4 ASN A 112 ? ALA A 138 ? ASN A 113 ALA A 139 1 ? 27 HELX_P HELX_P5 AA5 ASP A 140 ? ASN A 164 ? ASP A 141 ASN A 165 1 ? 25 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 8PV9 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 2 ? ? ? A . n A 1 2 THR 2 3 ? ? ? A . n A 1 3 ALA 3 4 ? ? ? A . n A 1 4 LYS 4 5 ? ? ? A . n A 1 5 LEU 5 6 ? ? ? A . n A 1 6 VAL 6 7 ? ? ? A . n A 1 7 LYS 7 8 ? ? ? A . n A 1 8 SER 8 9 ? ? ? A . n A 1 9 LYS 9 10 ? ? ? A . n A 1 10 ALA 10 11 ? ? ? A . n A 1 11 THR 11 12 ? ? ? A . n A 1 12 ASN 12 13 ? ? ? A . n A 1 13 LEU 13 14 14 LEU LEU A . n A 1 14 LEU 14 15 15 LEU LEU A . n A 1 15 TYR 15 16 16 TYR TYR A . n A 1 16 THR 16 17 17 THR THR A . n A 1 17 ARG 17 18 18 ARG ARG A . n A 1 18 ASN 18 19 19 ASN ASN A . n A 1 19 ASP 19 20 20 ASP ASP A . n A 1 20 VAL 20 21 21 VAL VAL A . n A 1 21 SER 21 22 22 SER SER A . n A 1 22 ASP 22 23 23 ASP ASP A . n A 1 23 SER 23 24 24 SER SER A . n A 1 24 GLU 24 25 25 GLU GLU A . n A 1 25 LYS 25 26 26 LYS LYS A . n A 1 26 ALA 26 27 27 ALA ALA A . n A 1 27 ALA 27 28 28 ALA ALA A . n A 1 28 THR 28 29 29 THR THR A . n A 1 29 VAL 29 30 30 VAL VAL A . n A 1 30 GLU 30 31 31 GLU GLU A . n A 1 31 LEU 31 32 32 LEU LEU A . n A 1 32 LEU 32 33 33 LEU LEU A . n A 1 33 ASN 33 34 34 ASN ASN A . n A 1 34 ARG 34 35 35 ARG ARG A . n A 1 35 GLN 35 36 36 GLN GLN A . n A 1 36 VAL 36 37 37 VAL VAL A . n A 1 37 ILE 37 38 38 ILE ILE A . n A 1 38 GLN 38 39 39 GLN GLN A . n A 1 39 PHE 39 40 40 PHE PHE A . n A 1 40 ILE 40 41 41 ILE ILE A . n A 1 41 ASP 41 42 42 ASP ASP A . n A 1 42 LEU 42 43 43 LEU LEU A . n A 1 43 SER 43 44 44 SER SER A . n A 1 44 LEU 44 45 45 LEU LEU A . n A 1 45 ILE 45 46 46 ILE ILE A . n A 1 46 THR 46 47 47 THR THR A . n A 1 47 LYS 47 48 48 LYS LYS A . n A 1 48 GLN 48 49 49 GLN GLN A . n A 1 49 ALA 49 50 50 ALA ALA A . n A 1 50 HIS 50 51 51 HIS HIS A . n A 1 51 TRP 51 52 52 TRP TRP A . n A 1 52 ASN 52 53 53 ASN ASN A . n A 1 53 MET 53 54 54 MET MET A . n A 1 54 ARG 54 55 55 ARG ARG A . n A 1 55 GLY 55 56 56 GLY GLY A . n A 1 56 ALA 56 57 57 ALA ALA A . n A 1 57 ASN 57 58 58 ASN ASN A . n A 1 58 PHE 58 59 59 PHE PHE A . n A 1 59 ILE 59 60 60 ILE ILE A . n A 1 60 ALA 60 61 61 ALA ALA A . n A 1 61 VAL 61 62 62 VAL VAL A . n A 1 62 HIS 62 63 63 HIS HIS A . n A 1 63 GLU 63 64 64 GLU GLU A . n A 1 64 MET 64 65 65 MET MET A . n A 1 65 LEU 65 66 66 LEU LEU A . n A 1 66 ASP 66 67 67 ASP ASP A . n A 1 67 GLY 67 68 68 GLY GLY A . n A 1 68 PHE 68 69 69 PHE PHE A . n A 1 69 ARG 69 70 70 ARG ARG A . n A 1 70 THR 70 71 71 THR THR A . n A 1 71 ALA 71 72 72 ALA ALA A . n A 1 72 LEU 72 73 73 LEU LEU A . n A 1 73 ILE 73 74 74 ILE ILE A . n A 1 74 ASP 74 75 75 ASP ASP A . n A 1 75 HIS 75 76 76 HIS HIS A . n A 1 76 LEU 76 77 77 LEU LEU A . n A 1 77 ASP 77 78 78 ASP ASP A . n A 1 78 THR 78 79 79 THR THR A . n A 1 79 MET 79 80 80 MET MET A . n A 1 80 ALA 80 81 81 ALA ALA A . n A 1 81 GLU 81 82 82 GLU GLU A . n A 1 82 ARG 82 83 83 ARG ARG A . n A 1 83 ALA 83 84 84 ALA ALA A . n A 1 84 VAL 84 85 85 VAL VAL A . n A 1 85 GLN 85 86 86 GLN GLN A . n A 1 86 LEU 86 87 87 LEU LEU A . n A 1 87 GLY 87 88 88 GLY GLY A . n A 1 88 GLY 88 89 89 GLY GLY A . n A 1 89 VAL 89 90 90 VAL VAL A . n A 1 90 ALA 90 91 91 ALA ALA A . n A 1 91 LEU 91 92 92 LEU LEU A . n A 1 92 GLY 92 93 93 GLY GLY A . n A 1 93 THR 93 94 94 THR THR A . n A 1 94 THR 94 95 95 THR THR A . n A 1 95 GLN 95 96 96 GLN GLN A . n A 1 96 VAL 96 97 97 VAL VAL A . n A 1 97 ILE 97 98 98 ILE ILE A . n A 1 98 ASN 98 99 99 ASN ASN A . n A 1 99 SER 99 100 100 SER SER A . n A 1 100 LYS 100 101 101 LYS LYS A . n A 1 101 THR 101 102 102 THR THR A . n A 1 102 PRO 102 103 103 PRO PRO A . n A 1 103 LEU 103 104 104 LEU LEU A . n A 1 104 LYS 104 105 105 LYS LYS A . n A 1 105 SER 105 106 106 SER SER A . n A 1 106 TYR 106 107 107 TYR TYR A . n A 1 107 PRO 107 108 108 PRO PRO A . n A 1 108 LEU 108 109 109 LEU LEU A . n A 1 109 ASP 109 110 110 ASP ASP A . n A 1 110 ILE 110 111 111 ILE ILE A . n A 1 111 HIS 111 112 112 HIS HIS A . n A 1 112 ASN 112 113 113 ASN ASN A . n A 1 113 VAL 113 114 114 VAL VAL A . n A 1 114 GLN 114 115 115 GLN GLN A . n A 1 115 ASP 115 116 116 ASP ASP A . n A 1 116 HIS 116 117 117 HIS HIS A . n A 1 117 LEU 117 118 118 LEU LEU A . n A 1 118 LYS 118 119 119 LYS LYS A . n A 1 119 GLU 119 120 120 GLU GLU A . n A 1 120 LEU 120 121 121 LEU LEU A . n A 1 121 ALA 121 122 122 ALA ALA A . n A 1 122 ASP 122 123 123 ASP ASP A . n A 1 123 ARG 123 124 124 ARG ARG A . n A 1 124 TYR 124 125 125 TYR TYR A . n A 1 125 ALA 125 126 126 ALA ALA A . n A 1 126 ILE 126 127 127 ILE ILE A . n A 1 127 VAL 127 128 128 VAL VAL A . n A 1 128 ALA 128 129 129 ALA ALA A . n A 1 129 ASN 129 130 130 ASN ASN A . n A 1 130 ASP 130 131 131 ASP ASP A . n A 1 131 VAL 131 132 132 VAL VAL A . n A 1 132 ARG 132 133 133 ARG ARG A . n A 1 133 LYS 133 134 134 LYS LYS A . n A 1 134 ALA 134 135 135 ALA ALA A . n A 1 135 ILE 135 136 136 ILE ILE A . n A 1 136 GLY 136 137 137 GLY GLY A . n A 1 137 GLU 137 138 138 GLU GLU A . n A 1 138 ALA 138 139 139 ALA ALA A . n A 1 139 LYS 139 140 140 LYS LYS A . n A 1 140 ASP 140 141 141 ASP ASP A . n A 1 141 ASP 141 142 142 ASP ASP A . n A 1 142 ASP 142 143 143 ASP ASP A . n A 1 143 THR 143 144 144 THR THR A . n A 1 144 ALA 144 145 145 ALA ALA A . n A 1 145 ASP 145 146 146 ASP ASP A . n A 1 146 ILE 146 147 147 ILE ILE A . n A 1 147 LEU 147 148 148 LEU LEU A . n A 1 148 THR 148 149 149 THR THR A . n A 1 149 ALA 149 150 150 ALA ALA A . n A 1 150 ALA 150 151 151 ALA ALA A . n A 1 151 SER 151 152 152 SER SER A . n A 1 152 ARG 152 153 153 ARG ARG A . n A 1 153 ASP 153 154 154 ASP ASP A . n A 1 154 LEU 154 155 155 LEU LEU A . n A 1 155 ASP 155 156 156 ASP ASP A . n A 1 156 LYS 156 157 157 LYS LYS A . n A 1 157 PHE 157 158 158 PHE PHE A . n A 1 158 LEU 158 159 159 LEU LEU A . n A 1 159 TRP 159 160 160 TRP TRP A . n A 1 160 PHE 160 161 161 PHE PHE A . n A 1 161 ILE 161 162 162 ILE ILE A . n A 1 162 GLU 162 163 163 GLU GLU A . n A 1 163 SER 163 164 164 SER SER A . n A 1 164 ASN 164 165 165 ASN ASN A . n A 1 165 ILE 165 166 166 ILE ILE A . n A 1 166 GLU 166 167 167 GLU GLU A . n # _pdbx_contact_author.id 1 _pdbx_contact_author.email crusso@mrc-lmb.cam.ac.uk _pdbx_contact_author.name_first Christopher _pdbx_contact_author.name_last Russo _pdbx_contact_author.name_mi J. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-4442-744X # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 12-meric _pdbx_struct_assembly.oligomeric_count 12 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0 0.0 0.0 0.0 0.0 1.0 0.0 0.0 0.0 0.0 1.0 0.0 2 'point symmetry operation' ? ? -0.500000 -0.866025 0.000000 285.53195 0.866025 -0.500000 0.000000 76.50805 0.000000 0.000000 1.000000 0.00000 3 'point symmetry operation' ? ? -0.500000 0.866025 0.000000 76.50805 -0.866025 -0.500000 0.000000 285.53195 0.000000 0.000000 1.000000 0.00000 4 'point symmetry operation' ? ? -0.500000 0.288675 0.816497 47.64788 -0.288675 0.833333 -0.471405 111.83975 -0.816497 -0.471405 -0.333333 316.33057 5 'point symmetry operation' ? ? -0.500000 -0.288675 -0.816497 314.39212 0.288675 0.833333 -0.471405 42.16512 0.816497 -0.471405 -0.333333 119.26096 6 'point symmetry operation' ? ? 0.500000 -0.866025 -0.000000 164.85195 -0.288675 -0.166667 0.942809 61.85245 -0.816497 -0.471405 -0.333333 316.33057 7 'point symmetry operation' ? ? 0.500000 -0.288675 -0.816497 193.71212 -0.866025 -0.166667 -0.471405 302.19438 -0.000000 0.942809 -0.333333 47.12847 8 'point symmetry operation' ? ? 0.500000 0.288675 0.816497 -73.03212 0.866025 -0.166667 -0.471405 93.17048 -0.000000 0.942809 -0.333333 47.12847 9 'point symmetry operation' ? ? 0.500000 0.866025 -0.000000 -44.17195 0.288675 -0.166667 0.942809 -7.82218 0.816497 -0.471405 -0.333333 119.26095 10 'point symmetry operation' ? ? -0.000000 -0.577350 0.816497 91.81982 -0.577350 -0.666667 -0.471405 327.69706 0.816497 -0.471405 -0.333333 119.26096 11 'point symmetry operation' ? ? 0.000000 0.577350 -0.816497 149.54018 0.577350 -0.666667 -0.471405 188.34780 -0.816497 -0.471405 -0.333333 316.33057 12 'point symmetry operation' ? ? -1.000000 -0.000000 -0.000000 241.36000 -0.000000 0.333333 0.942809 -33.32486 -0.000000 0.942809 -0.333333 47.12847 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-11-29 2 'Structure model' 1 1 2023-12-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' 13 2 'Structure model' '_citation_author.identifier_ORCID' 14 2 'Structure model' '_citation_author.name' # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8PV9 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space RECIPROCAL _em_3d_fitting.ref_protocol ? # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id 6zgl _em_3d_fitting_list.pdb_chain_id ? _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.details ? _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code 6zgl _em_3d_fitting_list.initial_refinement_model_id 1 # _em_3d_reconstruction.entry_id 8PV9 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.7 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 48896 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'DNA protection during starvation protein (DPS)' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_image_scans.entry_id 8PV9 _em_image_scans.id 1 _em_image_scans.number_digital_images ? _em_image_scans.details ? _em_image_scans.scanner_model ? _em_image_scans.sampling_size 75 _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.citation_id ? _em_image_scans.dimension_height 1066 _em_image_scans.dimension_width 1030 _em_image_scans.frames_per_image ? _em_image_scans.image_recording_id 1 _em_image_scans.used_frames_per_image ? # _em_imaging.entry_id 8PV9 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'JEOL 1400/HR + YPS FEG' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'GATAN 626 SINGLE TILT LIQUID NITROGEN CRYO TRANSFER HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 100 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 500 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material GOLD _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type 'UltrAuFoil R0./1' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8PV9 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8PV9 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8PV9 _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry T # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id HIS _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 112 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -131.34 _pdbx_validate_torsion.psi -40.45 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 70 ? ? 0.093 'SIDE CHAIN' 2 1 ARG A 124 ? ? 0.165 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 2 ? A SER 1 2 1 Y 1 A THR 3 ? A THR 2 3 1 Y 1 A ALA 4 ? A ALA 3 4 1 Y 1 A LYS 5 ? A LYS 4 5 1 Y 1 A LEU 6 ? A LEU 5 6 1 Y 1 A VAL 7 ? A VAL 6 7 1 Y 1 A LYS 8 ? A LYS 7 8 1 Y 1 A SER 9 ? A SER 8 9 1 Y 1 A LYS 10 ? A LYS 9 10 1 Y 1 A ALA 11 ? A ALA 10 11 1 Y 1 A THR 12 ? A THR 11 12 1 Y 1 A ASN 13 ? A ASN 12 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 ILE N N N N 144 ILE CA C N S 145 ILE C C N N 146 ILE O O N N 147 ILE CB C N S 148 ILE CG1 C N N 149 ILE CG2 C N N 150 ILE CD1 C N N 151 ILE OXT O N N 152 ILE H H N N 153 ILE H2 H N N 154 ILE HA H N N 155 ILE HB H N N 156 ILE HG12 H N N 157 ILE HG13 H N N 158 ILE HG21 H N N 159 ILE HG22 H N N 160 ILE HG23 H N N 161 ILE HD11 H N N 162 ILE HD12 H N N 163 ILE HD13 H N N 164 ILE HXT H N N 165 LEU N N N N 166 LEU CA C N S 167 LEU C C N N 168 LEU O O N N 169 LEU CB C N N 170 LEU CG C N N 171 LEU CD1 C N N 172 LEU CD2 C N N 173 LEU OXT O N N 174 LEU H H N N 175 LEU H2 H N N 176 LEU HA H N N 177 LEU HB2 H N N 178 LEU HB3 H N N 179 LEU HG H N N 180 LEU HD11 H N N 181 LEU HD12 H N N 182 LEU HD13 H N N 183 LEU HD21 H N N 184 LEU HD22 H N N 185 LEU HD23 H N N 186 LEU HXT H N N 187 LYS N N N N 188 LYS CA C N S 189 LYS C C N N 190 LYS O O N N 191 LYS CB C N N 192 LYS CG C N N 193 LYS CD C N N 194 LYS CE C N N 195 LYS NZ N N N 196 LYS OXT O N N 197 LYS H H N N 198 LYS H2 H N N 199 LYS HA H N N 200 LYS HB2 H N N 201 LYS HB3 H N N 202 LYS HG2 H N N 203 LYS HG3 H N N 204 LYS HD2 H N N 205 LYS HD3 H N N 206 LYS HE2 H N N 207 LYS HE3 H N N 208 LYS HZ1 H N N 209 LYS HZ2 H N N 210 LYS HZ3 H N N 211 LYS HXT H N N 212 MET N N N N 213 MET CA C N S 214 MET C C N N 215 MET O O N N 216 MET CB C N N 217 MET CG C N N 218 MET SD S N N 219 MET CE C N N 220 MET OXT O N N 221 MET H H N N 222 MET H2 H N N 223 MET HA H N N 224 MET HB2 H N N 225 MET HB3 H N N 226 MET HG2 H N N 227 MET HG3 H N N 228 MET HE1 H N N 229 MET HE2 H N N 230 MET HE3 H N N 231 MET HXT H N N 232 PHE N N N N 233 PHE CA C N S 234 PHE C C N N 235 PHE O O N N 236 PHE CB C N N 237 PHE CG C Y N 238 PHE CD1 C Y N 239 PHE CD2 C Y N 240 PHE CE1 C Y N 241 PHE CE2 C Y N 242 PHE CZ C Y N 243 PHE OXT O N N 244 PHE H H N N 245 PHE H2 H N N 246 PHE HA H N N 247 PHE HB2 H N N 248 PHE HB3 H N N 249 PHE HD1 H N N 250 PHE HD2 H N N 251 PHE HE1 H N N 252 PHE HE2 H N N 253 PHE HZ H N N 254 PHE HXT H N N 255 PRO N N N N 256 PRO CA C N S 257 PRO C C N N 258 PRO O O N N 259 PRO CB C N N 260 PRO CG C N N 261 PRO CD C N N 262 PRO OXT O N N 263 PRO H H N N 264 PRO HA H N N 265 PRO HB2 H N N 266 PRO HB3 H N N 267 PRO HG2 H N N 268 PRO HG3 H N N 269 PRO HD2 H N N 270 PRO HD3 H N N 271 PRO HXT H N N 272 SER N N N N 273 SER CA C N S 274 SER C C N N 275 SER O O N N 276 SER CB C N N 277 SER OG O N N 278 SER OXT O N N 279 SER H H N N 280 SER H2 H N N 281 SER HA H N N 282 SER HB2 H N N 283 SER HB3 H N N 284 SER HG H N N 285 SER HXT H N N 286 THR N N N N 287 THR CA C N S 288 THR C C N N 289 THR O O N N 290 THR CB C N R 291 THR OG1 O N N 292 THR CG2 C N N 293 THR OXT O N N 294 THR H H N N 295 THR H2 H N N 296 THR HA H N N 297 THR HB H N N 298 THR HG1 H N N 299 THR HG21 H N N 300 THR HG22 H N N 301 THR HG23 H N N 302 THR HXT H N N 303 TRP N N N N 304 TRP CA C N S 305 TRP C C N N 306 TRP O O N N 307 TRP CB C N N 308 TRP CG C Y N 309 TRP CD1 C Y N 310 TRP CD2 C Y N 311 TRP NE1 N Y N 312 TRP CE2 C Y N 313 TRP CE3 C Y N 314 TRP CZ2 C Y N 315 TRP CZ3 C Y N 316 TRP CH2 C Y N 317 TRP OXT O N N 318 TRP H H N N 319 TRP H2 H N N 320 TRP HA H N N 321 TRP HB2 H N N 322 TRP HB3 H N N 323 TRP HD1 H N N 324 TRP HE1 H N N 325 TRP HE3 H N N 326 TRP HZ2 H N N 327 TRP HZ3 H N N 328 TRP HH2 H N N 329 TRP HXT H N N 330 TYR N N N N 331 TYR CA C N S 332 TYR C C N N 333 TYR O O N N 334 TYR CB C N N 335 TYR CG C Y N 336 TYR CD1 C Y N 337 TYR CD2 C Y N 338 TYR CE1 C Y N 339 TYR CE2 C Y N 340 TYR CZ C Y N 341 TYR OH O N N 342 TYR OXT O N N 343 TYR H H N N 344 TYR H2 H N N 345 TYR HA H N N 346 TYR HB2 H N N 347 TYR HB3 H N N 348 TYR HD1 H N N 349 TYR HD2 H N N 350 TYR HE1 H N N 351 TYR HE2 H N N 352 TYR HH H N N 353 TYR HXT H N N 354 VAL N N N N 355 VAL CA C N S 356 VAL C C N N 357 VAL O O N N 358 VAL CB C N N 359 VAL CG1 C N N 360 VAL CG2 C N N 361 VAL OXT O N N 362 VAL H H N N 363 VAL H2 H N N 364 VAL HA H N N 365 VAL HB H N N 366 VAL HG11 H N N 367 VAL HG12 H N N 368 VAL HG13 H N N 369 VAL HG21 H N N 370 VAL HG22 H N N 371 VAL HG23 H N N 372 VAL HXT H N N 373 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 MET N CA sing N N 203 MET N H sing N N 204 MET N H2 sing N N 205 MET CA C sing N N 206 MET CA CB sing N N 207 MET CA HA sing N N 208 MET C O doub N N 209 MET C OXT sing N N 210 MET CB CG sing N N 211 MET CB HB2 sing N N 212 MET CB HB3 sing N N 213 MET CG SD sing N N 214 MET CG HG2 sing N N 215 MET CG HG3 sing N N 216 MET SD CE sing N N 217 MET CE HE1 sing N N 218 MET CE HE2 sing N N 219 MET CE HE3 sing N N 220 MET OXT HXT sing N N 221 PHE N CA sing N N 222 PHE N H sing N N 223 PHE N H2 sing N N 224 PHE CA C sing N N 225 PHE CA CB sing N N 226 PHE CA HA sing N N 227 PHE C O doub N N 228 PHE C OXT sing N N 229 PHE CB CG sing N N 230 PHE CB HB2 sing N N 231 PHE CB HB3 sing N N 232 PHE CG CD1 doub Y N 233 PHE CG CD2 sing Y N 234 PHE CD1 CE1 sing Y N 235 PHE CD1 HD1 sing N N 236 PHE CD2 CE2 doub Y N 237 PHE CD2 HD2 sing N N 238 PHE CE1 CZ doub Y N 239 PHE CE1 HE1 sing N N 240 PHE CE2 CZ sing Y N 241 PHE CE2 HE2 sing N N 242 PHE CZ HZ sing N N 243 PHE OXT HXT sing N N 244 PRO N CA sing N N 245 PRO N CD sing N N 246 PRO N H sing N N 247 PRO CA C sing N N 248 PRO CA CB sing N N 249 PRO CA HA sing N N 250 PRO C O doub N N 251 PRO C OXT sing N N 252 PRO CB CG sing N N 253 PRO CB HB2 sing N N 254 PRO CB HB3 sing N N 255 PRO CG CD sing N N 256 PRO CG HG2 sing N N 257 PRO CG HG3 sing N N 258 PRO CD HD2 sing N N 259 PRO CD HD3 sing N N 260 PRO OXT HXT sing N N 261 SER N CA sing N N 262 SER N H sing N N 263 SER N H2 sing N N 264 SER CA C sing N N 265 SER CA CB sing N N 266 SER CA HA sing N N 267 SER C O doub N N 268 SER C OXT sing N N 269 SER CB OG sing N N 270 SER CB HB2 sing N N 271 SER CB HB3 sing N N 272 SER OG HG sing N N 273 SER OXT HXT sing N N 274 THR N CA sing N N 275 THR N H sing N N 276 THR N H2 sing N N 277 THR CA C sing N N 278 THR CA CB sing N N 279 THR CA HA sing N N 280 THR C O doub N N 281 THR C OXT sing N N 282 THR CB OG1 sing N N 283 THR CB CG2 sing N N 284 THR CB HB sing N N 285 THR OG1 HG1 sing N N 286 THR CG2 HG21 sing N N 287 THR CG2 HG22 sing N N 288 THR CG2 HG23 sing N N 289 THR OXT HXT sing N N 290 TRP N CA sing N N 291 TRP N H sing N N 292 TRP N H2 sing N N 293 TRP CA C sing N N 294 TRP CA CB sing N N 295 TRP CA HA sing N N 296 TRP C O doub N N 297 TRP C OXT sing N N 298 TRP CB CG sing N N 299 TRP CB HB2 sing N N 300 TRP CB HB3 sing N N 301 TRP CG CD1 doub Y N 302 TRP CG CD2 sing Y N 303 TRP CD1 NE1 sing Y N 304 TRP CD1 HD1 sing N N 305 TRP CD2 CE2 doub Y N 306 TRP CD2 CE3 sing Y N 307 TRP NE1 CE2 sing Y N 308 TRP NE1 HE1 sing N N 309 TRP CE2 CZ2 sing Y N 310 TRP CE3 CZ3 doub Y N 311 TRP CE3 HE3 sing N N 312 TRP CZ2 CH2 doub Y N 313 TRP CZ2 HZ2 sing N N 314 TRP CZ3 CH2 sing Y N 315 TRP CZ3 HZ3 sing N N 316 TRP CH2 HH2 sing N N 317 TRP OXT HXT sing N N 318 TYR N CA sing N N 319 TYR N H sing N N 320 TYR N H2 sing N N 321 TYR CA C sing N N 322 TYR CA CB sing N N 323 TYR CA HA sing N N 324 TYR C O doub N N 325 TYR C OXT sing N N 326 TYR CB CG sing N N 327 TYR CB HB2 sing N N 328 TYR CB HB3 sing N N 329 TYR CG CD1 doub Y N 330 TYR CG CD2 sing Y N 331 TYR CD1 CE1 sing Y N 332 TYR CD1 HD1 sing N N 333 TYR CD2 CE2 doub Y N 334 TYR CD2 HD2 sing N N 335 TYR CE1 CZ doub Y N 336 TYR CE1 HE1 sing N N 337 TYR CE2 CZ sing Y N 338 TYR CE2 HE2 sing N N 339 TYR CZ OH sing N N 340 TYR OH HH sing N N 341 TYR OXT HXT sing N N 342 VAL N CA sing N N 343 VAL N H sing N N 344 VAL N H2 sing N N 345 VAL CA C sing N N 346 VAL CA CB sing N N 347 VAL CA HA sing N N 348 VAL C O doub N N 349 VAL C OXT sing N N 350 VAL CB CG1 sing N N 351 VAL CB CG2 sing N N 352 VAL CB HB sing N N 353 VAL CG1 HG11 sing N N 354 VAL CG1 HG12 sing N N 355 VAL CG1 HG13 sing N N 356 VAL CG2 HG21 sing N N 357 VAL CG2 HG22 sing N N 358 VAL CG2 HG23 sing N N 359 VAL OXT HXT sing N N 360 # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 562 _em_entity_assembly_naturalsource.organism 'Escherichia coli' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 40 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'DECTRIS SINGLA (1k x 1k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? ? ? OTHER ? 8 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 9 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? CLASSIFICATION ? 11 1 ? ? ? ? RECONSTRUCTION ? 12 1 ? ? ? ? 'MODEL REFINEMENT' ? 13 ? 1 ? Servalcat 0.4.27 # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Medical Research Council (MRC, United Kingdom)' 'United Kingdom' 'MC UP 120117' 1 'Medical Research Council (MRC, United Kingdom)' 'United Kingdom' 'MC U105184322' 2 'Wellcome Trust' 'United Kingdom' 220526/B/20/Z 3 'Engineering and Physical Sciences Research Council' 'United Kingdom' R122522 4 'Innovate UK' 'United Kingdom' 103806 5 'Biotechnology and Biological Sciences Research Council (BBSRC)' 'United Kingdom' BB/T003677/1 6 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6zgl # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' #