data_8SJS # _entry.id 8SJS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8SJS pdb_00008sjs 10.2210/pdb8sjs/pdb WWPDB D_1000273913 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-04-24 2 'Structure model' 1 1 2024-05-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8SJS _pdbx_database_status.recvd_initial_deposition_date 2023-04-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email rs17@nyu.edu _pdbx_contact_author.name_first Ruojie _pdbx_contact_author.name_last Sha _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-0807-734X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Janowski, J.' 1 0000-0002-6990-5719 'Vecchioni, S.' 2 0000-0001-8243-650X 'Sha, R.' 3 0000-0002-0807-734X 'Ohayon, Y.P.' 4 0000-0001-7500-4282 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 121 _citation.language ? _citation.page_first e2321992121 _citation.page_last e2321992121 _citation.title 'Engineering tertiary chirality in helical biopolymers.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.2321992121 _citation.pdbx_database_id_PubMed 38684000 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Janowski, J.' 1 ? primary 'Pham, V.A.B.' 2 0000-0001-5074-7303 primary 'Vecchioni, S.' 3 0000-0001-8243-650X primary 'Woloszyn, K.' 4 ? primary 'Lu, B.' 5 0000-0001-6424-2197 primary 'Zou, Y.' 6 ? primary 'Erkalo, B.' 7 ? primary 'Perren, L.' 8 0000-0001-9169-1780 primary 'Rueb, J.' 9 ? primary 'Madnick, J.' 10 0000-0003-1026-8409 primary 'Mao, C.' 11 0000-0001-7516-8666 primary 'Saito, M.' 12 0000-0003-0795-8548 primary 'Ohayon, Y.P.' 13 0000-0001-7500-4282 primary 'Jonoska, N.' 14 ? primary 'Sha, R.' 15 0000-0002-0807-734X # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*AP*GP*AP*GP*CP*CP*TP*GP*AP*CP*AP*TP*AP*CP*CP*GP*CP*A)-3') ; 5783.765 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(P*TP*GP*CP*GP*GP*TP*AP*TP*GP*TP*CP*AP*CP*CP*AP*CP*GP*A)-3') ; 5516.579 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*TP*GP*CP*GP*CP*TP*GP*TP*GP*GP*CP*TP*C)-3') ; 3974.570 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(P*TP*CP*GP*TP*GP*GP*AP*CP*AP*GP*CP*G)-3') ; 3703.416 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DA)(DG)(DA)(DG)(DC)(DC)(DT)(DG)(DA)(DC)(DA)(DT)(DA)(DC)(DC)(DG)(DC)(DA)' CAGAGCCTGACATACCGCA A ? 2 polydeoxyribonucleotide no no '(DT)(DG)(DC)(DG)(DG)(DT)(DA)(DT)(DG)(DT)(DC)(DA)(DC)(DC)(DA)(DC)(DG)(DA)' TGCGGTATGTCACCACGA B ? 3 polydeoxyribonucleotide no no '(DT)(DG)(DC)(DG)(DC)(DT)(DG)(DT)(DG)(DG)(DC)(DT)(DC)' TGCGCTGTGGCTC C ? 4 polydeoxyribonucleotide no no '(DT)(DC)(DG)(DT)(DG)(DG)(DA)(DC)(DA)(DG)(DC)(DG)' TCGTGGACAGCG D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DA n 1 3 DG n 1 4 DA n 1 5 DG n 1 6 DC n 1 7 DC n 1 8 DT n 1 9 DG n 1 10 DA n 1 11 DC n 1 12 DA n 1 13 DT n 1 14 DA n 1 15 DC n 1 16 DC n 1 17 DG n 1 18 DC n 1 19 DA n 2 1 DT n 2 2 DG n 2 3 DC n 2 4 DG n 2 5 DG n 2 6 DT n 2 7 DA n 2 8 DT n 2 9 DG n 2 10 DT n 2 11 DC n 2 12 DA n 2 13 DC n 2 14 DC n 2 15 DA n 2 16 DC n 2 17 DG n 2 18 DA n 3 1 DT n 3 2 DG n 3 3 DC n 3 4 DG n 3 5 DC n 3 6 DT n 3 7 DG n 3 8 DT n 3 9 DG n 3 10 DG n 3 11 DC n 3 12 DT n 3 13 DC n 4 1 DT n 4 2 DC n 4 3 DG n 4 4 DT n 4 5 DG n 4 6 DG n 4 7 DA n 4 8 DC n 4 9 DA n 4 10 DG n 4 11 DC n 4 12 DG n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 19 'synthetic construct' ? 32630 ? 2 1 sample 1 18 'synthetic construct' ? 32630 ? 3 1 sample 1 13 'synthetic construct' ? 32630 ? 4 1 sample 1 12 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 101 101 DC DC A . n A 1 2 DA 2 102 102 DA DA A . n A 1 3 DG 3 103 103 DG DG A . n A 1 4 DA 4 104 104 DA DA A . n A 1 5 DG 5 105 105 DG DG A . n A 1 6 DC 6 106 106 DC DC A . n A 1 7 DC 7 107 107 DC DC A . n A 1 8 DT 8 108 108 DT DT A . n A 1 9 DG 9 109 109 DG DG A . n A 1 10 DA 10 110 110 DA DA A . n A 1 11 DC 11 111 111 DC DC A . n A 1 12 DA 12 112 112 DA DA A . n A 1 13 DT 13 113 113 DT DT A . n A 1 14 DA 14 114 114 DA DA A . n A 1 15 DC 15 115 115 DC DC A . n A 1 16 DC 16 116 116 DC DC A . n A 1 17 DG 17 117 117 DG DG A . n A 1 18 DC 18 118 118 DC DC A . n A 1 19 DA 19 119 119 DA DA A . n B 2 1 DT 1 101 101 DT DT B . n B 2 2 DG 2 102 102 DG DG B . n B 2 3 DC 3 103 103 DC DC B . n B 2 4 DG 4 104 104 DG DG B . n B 2 5 DG 5 105 105 DG DG B . n B 2 6 DT 6 106 106 DT DT B . n B 2 7 DA 7 107 107 DA DA B . n B 2 8 DT 8 108 108 DT DT B . n B 2 9 DG 9 109 109 DG DG B . n B 2 10 DT 10 110 110 DT DT B . n B 2 11 DC 11 111 111 DC DC B . n B 2 12 DA 12 112 112 DA DA B . n B 2 13 DC 13 113 113 DC DC B . n B 2 14 DC 14 114 114 DC DC B . n B 2 15 DA 15 115 115 DA DA B . n B 2 16 DC 16 116 116 DC DC B . n B 2 17 DG 17 117 117 DG DG B . n B 2 18 DA 18 118 118 DA DA B . n C 3 1 DT 1 101 101 DT DT C . n C 3 2 DG 2 102 102 DG DG C . n C 3 3 DC 3 103 103 DC DC C . n C 3 4 DG 4 104 104 DG DG C . n C 3 5 DC 5 105 105 DC DC C . n C 3 6 DT 6 106 106 DT DT C . n C 3 7 DG 7 107 107 DG DG C . n C 3 8 DT 8 108 108 DT DT C . n C 3 9 DG 9 109 109 DG DG C . n C 3 10 DG 10 110 110 DG DG C . n C 3 11 DC 11 111 111 DC DC C . n C 3 12 DT 12 112 112 DT DT C . n C 3 13 DC 13 113 113 DC DC C . n D 4 1 DT 1 101 101 DT DT D . n D 4 2 DC 2 102 102 DC DC D . n D 4 3 DG 3 103 103 DG DG D . n D 4 4 DT 4 104 104 DT DT D . n D 4 5 DG 5 105 105 DG DG D . n D 4 6 DG 6 106 106 DG DG D . n D 4 7 DA 7 107 107 DA DA D . n D 4 8 DC 8 108 108 DC DC D . n D 4 9 DA 9 109 109 DA DA D . n D 4 10 DG 10 110 110 DG DG D . n D 4 11 DC 11 111 111 DC DC D . n D 4 12 DG 12 112 112 DG DG D . n # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? STARANISO ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 8SJS _cell.details ? _cell.formula_units_Z ? _cell.length_a 194.203 _cell.length_a_esd ? _cell.length_b 194.203 _cell.length_b_esd ? _cell.length_c 55.434 _cell.length_c_esd ? _cell.volume 1810584.167 _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8SJS _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall 'P 6c' _symmetry.space_group_name_H-M 'P 63' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8SJS _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 15.90 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 92.26 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.8 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details '338K-293K at 0.4K/hr' _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM MOPS, 1.25 M magnesium sulfate' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-10-16 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 413.95 _reflns.entry_id 8SJS _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 6.307 _reflns.d_resolution_low 97.102 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 2039 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 86.1 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 19.4 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.000 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 6.307 7.018 ? ? ? ? ? ? 207 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 1 0.305 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 15.535 97.102 ? ? ? ? ? ? 204 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 0.999 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 547.85 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8SJS _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 6.31 _refine.ls_d_res_low 41.78 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 2008 _refine.ls_number_reflns_R_free 99 _refine.ls_number_reflns_R_work 1909 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 73.77 _refine.ls_percent_reflns_R_free 4.93 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1102 _refine.ls_R_factor_R_free 0.1191 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1097 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 5W6W' _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 17.2512 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1060 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 6.31 _refine_hist.d_res_low 41.78 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1265 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1265 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0168 ? 1416 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.4921 ? 2177 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0963 ? 246 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0090 ? 62 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 41.1149 ? 606 ? f_dihedral_angle_d ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 6.31 _refine_ls_shell.d_res_low 41.78 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 99 _refine_ls_shell.number_reflns_R_work 1909 _refine_ls_shell.percent_reflns_obs 73.77 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.1097 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.1191 # _struct.entry_id 8SJS _struct.title '[3T18] Self-assembling right-handed tensegrity triangle with 18 interjunction base pairs and P63 symmetry' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8SJS _struct_keywords.text 'Tensegrity triangle, DNA nanotechnology, nanomaterials, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8SJS 8SJS ? 1 ? 1 2 PDB 8SJS 8SJS ? 2 ? 1 3 PDB 8SJS 8SJS ? 3 ? 1 4 PDB 8SJS 8SJS ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8SJS A 1 ? 19 ? 8SJS 101 ? 119 ? 101 119 2 2 8SJS B 1 ? 18 ? 8SJS 101 ? 118 ? 101 118 3 3 8SJS C 1 ? 13 ? 8SJS 101 ? 113 ? 101 113 4 4 8SJS D 1 ? 12 ? 8SJS 101 ? 112 ? 101 112 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D 1 2 A,B,C,D 1 3 A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_565 -y,x-y+1,z -0.5000000000 -0.8660254038 0.0000000000 -97.1015000000 0.8660254038 -0.5000000000 0.0000000000 168.1847314911 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_455 -x+y-1,-x,z -0.5000000000 0.8660254038 0.0000000000 -194.2030000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 3 N1 ? ? ? 1_555 C DC 13 N3 ? ? A DG 103 C DC 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 3 N2 ? ? ? 1_555 C DC 13 O2 ? ? A DG 103 C DC 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 3 O6 ? ? ? 1_555 C DC 13 N4 ? ? A DG 103 C DC 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 4 N1 ? ? ? 1_555 C DT 12 N3 ? ? A DA 104 C DT 112 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog5 hydrog ? ? A DG 5 N1 ? ? ? 1_555 C DC 11 N3 ? ? A DG 105 C DC 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 5 N2 ? ? ? 1_555 C DC 11 O2 ? ? A DG 105 C DC 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 5 O6 ? ? ? 1_555 C DC 11 N4 ? ? A DG 105 C DC 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 6 O2 ? ? ? 1_555 C DG 10 N2 ? ? A DC 106 C DG 110 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog9 hydrog ? ? A DC 7 N3 ? ? ? 1_555 C DG 9 N1 ? ? A DC 107 C DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 7 N4 ? ? ? 1_555 C DG 9 O6 ? ? A DC 107 C DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 7 O2 ? ? ? 1_555 C DG 9 N2 ? ? A DC 107 C DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 12 N1 ? ? A DT 108 B DA 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 12 N6 ? ? A DT 108 B DA 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 11 N3 ? ? A DG 109 B DC 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 11 O2 ? ? A DG 109 B DC 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 11 N4 ? ? A DG 109 B DC 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DG 9 N1 ? ? A DA 110 B DG 109 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog18 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DG 9 O6 ? ? A DA 110 B DG 109 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog19 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DT 10 N3 ? ? A DA 110 B DT 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 10 O4 ? ? A DA 110 B DT 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 9 N1 ? ? A DC 111 B DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 111 B DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 9 N2 ? ? A DC 111 B DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 12 N1 ? ? ? 1_555 B DT 8 N3 ? ? A DA 112 B DT 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 12 N6 ? ? ? 1_555 B DT 8 O4 ? ? A DA 112 B DT 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DT 13 N3 ? ? ? 1_555 B DA 7 N1 ? ? A DT 113 B DA 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DT 13 O4 ? ? ? 1_555 B DA 7 N6 ? ? A DT 113 B DA 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DA 14 N1 ? ? ? 1_555 B DT 6 N3 ? ? A DA 114 B DT 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DA 14 N6 ? ? ? 1_555 B DT 6 O4 ? ? A DA 114 B DT 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DC 15 N3 ? ? ? 1_555 B DG 5 N1 ? ? A DC 115 B DG 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DC 15 N4 ? ? ? 1_555 B DG 5 O6 ? ? A DC 115 B DG 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DC 15 O2 ? ? ? 1_555 B DG 5 N2 ? ? A DC 115 B DG 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DC 16 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 116 B DG 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DC 16 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 116 B DG 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 16 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 116 B DG 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 16 N3 ? ? ? 1_555 B DG 5 N2 ? ? A DC 116 B DG 105 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog37 hydrog ? ? A DC 16 O2 ? ? ? 1_555 B DG 5 N1 ? ? A DC 116 B DG 105 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog38 hydrog ? ? A DG 17 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 117 B DC 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DG 17 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 117 B DC 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DG 17 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 117 B DC 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DC 18 N4 ? ? ? 1_555 B DT 1 O4 ? ? A DC 118 B DT 101 1_555 ? ? ? ? ? ? 'DC-DT MISPAIR' ? ? ? hydrog42 hydrog ? ? A DC 18 O2 ? ? ? 1_555 B DG 2 N1 ? ? A DC 118 B DG 102 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog43 hydrog ? ? A DA 19 N1 ? ? ? 1_555 B DT 1 N3 ? ? A DA 119 B DT 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DA 19 N6 ? ? ? 1_555 B DT 1 O4 ? ? A DA 119 B DT 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B DC 13 N3 ? ? ? 1_555 D DG 6 N1 ? ? B DC 113 D DG 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B DC 13 N4 ? ? ? 1_555 D DG 6 O6 ? ? B DC 113 D DG 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B DC 13 O2 ? ? ? 1_555 D DG 6 N2 ? ? B DC 113 D DG 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B DC 14 N3 ? ? ? 1_555 D DG 5 N1 ? ? B DC 114 D DG 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B DC 14 N4 ? ? ? 1_555 D DG 5 O6 ? ? B DC 114 D DG 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B DC 14 O2 ? ? ? 1_555 D DG 5 N2 ? ? B DC 114 D DG 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B DA 15 N1 ? ? ? 1_555 D DT 4 N3 ? ? B DA 115 D DT 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B DA 15 N6 ? ? ? 1_555 D DT 4 O4 ? ? B DA 115 D DT 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B DC 16 O2 ? ? ? 1_555 D DG 3 N1 ? ? B DC 116 D DG 103 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog54 hydrog ? ? B DC 16 O2 ? ? ? 1_555 D DT 4 N3 ? ? B DC 116 D DT 104 1_555 ? ? ? ? ? ? 'DC-DT MISPAIR' ? ? ? hydrog55 hydrog ? ? B DG 17 N1 ? ? ? 1_555 D DC 2 N3 ? ? B DG 117 D DC 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B DG 17 N2 ? ? ? 1_555 D DC 2 O2 ? ? B DG 117 D DC 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B DG 17 O6 ? ? ? 1_555 D DC 2 N4 ? ? B DG 117 D DC 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B DA 18 N1 ? ? ? 1_555 D DT 1 N3 ? ? B DA 118 D DT 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? B DA 18 N6 ? ? ? 1_555 D DT 1 O4 ? ? B DA 118 D DT 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? C DG 2 N1 ? ? ? 1_555 D DG 12 O6 ? ? C DG 102 D DG 112 1_555 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog61 hydrog ? ? C DG 2 O6 ? ? ? 1_555 D DG 12 N1 ? ? C DG 102 D DG 112 1_555 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog62 hydrog ? ? C DC 3 O2 ? ? ? 1_555 D DG 12 N2 ? ? C DC 103 D DG 112 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog63 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DG 10 N1 ? ? C DG 104 D DG 110 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? hydrog64 hydrog ? ? C DC 5 N3 ? ? ? 1_555 D DG 10 N1 ? ? C DC 105 D DG 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? C DC 5 N4 ? ? ? 1_555 D DG 10 O6 ? ? C DC 105 D DG 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? C DC 5 O2 ? ? ? 1_555 D DG 10 N2 ? ? C DC 105 D DG 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 9 N1 ? ? C DT 106 D DA 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 9 N6 ? ? C DT 106 D DA 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? C DG 7 N1 ? ? ? 1_555 D DC 8 N3 ? ? C DG 107 D DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? C DG 7 N2 ? ? ? 1_555 D DC 8 O2 ? ? C DG 107 D DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? C DG 7 O6 ? ? ? 1_555 D DC 8 N4 ? ? C DG 107 D DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? C DT 8 N3 ? ? ? 1_555 D DA 7 N1 ? ? C DT 108 D DA 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? C DT 8 O4 ? ? ? 1_555 D DA 7 N6 ? ? C DT 108 D DA 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 N3 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 DC _pdbx_validate_close_contact.auth_seq_id_1 107 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 N2 _pdbx_validate_close_contact.auth_asym_id_2 C _pdbx_validate_close_contact.auth_comp_id_2 DG _pdbx_validate_close_contact.auth_seq_id_2 110 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.06 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 "O3'" A DA 119 ? ? 1_555 OP2 D DT 101 ? ? 2_565 1.18 2 1 P B DT 101 ? ? 1_555 "O3'" B DA 118 ? ? 2_565 1.60 3 1 "O3'" A DA 119 ? ? 1_555 P D DT 101 ? ? 2_565 1.63 4 1 OP1 B DT 101 ? ? 1_555 "O3'" B DA 118 ? ? 2_565 1.68 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" A DA 104 ? ? "C3'" A DA 104 ? ? 1.371 1.419 -0.048 0.006 N 2 1 "C5'" A DC 107 ? ? "C4'" A DC 107 ? ? 1.568 1.512 0.056 0.007 N 3 1 "O3'" A DA 110 ? ? "C3'" A DA 110 ? ? 1.530 1.435 0.095 0.013 N 4 1 "C5'" A DC 111 ? ? "C4'" A DC 111 ? ? 1.564 1.512 0.052 0.007 N 5 1 "O3'" A DA 112 ? ? "C3'" A DA 112 ? ? 1.372 1.419 -0.047 0.006 N 6 1 "O3'" A DT 113 ? ? "C3'" A DT 113 ? ? 1.383 1.419 -0.036 0.006 N 7 1 "O3'" A DG 117 ? ? "C3'" A DG 117 ? ? 1.529 1.435 0.094 0.013 N 8 1 "C1'" A DC 118 ? ? N1 A DC 118 ? ? 1.567 1.488 0.079 0.013 N 9 1 "O3'" C DG 109 ? ? "C3'" C DG 109 ? ? 1.335 1.419 -0.084 0.006 N 10 1 "O3'" C DG 110 ? ? "C3'" C DG 110 ? ? 1.370 1.419 -0.049 0.006 N 11 1 "O3'" D DC 111 ? ? "C3'" D DC 111 ? ? 1.382 1.419 -0.037 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 103 ? ? "C1'" A DG 103 ? ? N9 A DG 103 ? ? 111.69 108.30 3.39 0.30 N 2 1 "O4'" A DC 106 ? ? "C1'" A DC 106 ? ? N1 A DC 106 ? ? 113.71 108.30 5.41 0.30 N 3 1 "O4'" A DG 109 ? ? "C1'" A DG 109 ? ? N9 A DG 109 ? ? 110.37 108.30 2.07 0.30 N 4 1 "O4'" A DA 110 ? ? "C1'" A DA 110 ? ? N9 A DA 110 ? ? 110.83 108.30 2.53 0.30 N 5 1 "O4'" A DA 112 ? ? "C1'" A DA 112 ? ? N9 A DA 112 ? ? 110.65 108.30 2.35 0.30 N 6 1 "O4'" A DC 116 ? ? "C1'" A DC 116 ? ? N1 A DC 116 ? ? 111.08 108.30 2.78 0.30 N 7 1 "O4'" B DC 103 ? ? "C4'" B DC 103 ? ? "C3'" B DC 103 ? ? 101.58 104.50 -2.92 0.40 N 8 1 "O4'" B DG 104 ? ? "C1'" B DG 104 ? ? N9 B DG 104 ? ? 110.72 108.30 2.42 0.30 N 9 1 "O4'" B DT 110 ? ? "C1'" B DT 110 ? ? N1 B DT 110 ? ? 111.61 108.30 3.31 0.30 N 10 1 "O4'" B DC 116 ? ? "C1'" B DC 116 ? ? N1 B DC 116 ? ? 110.50 108.30 2.20 0.30 N 11 1 "C3'" C DG 104 ? ? "C2'" C DG 104 ? ? "C1'" C DG 104 ? ? 96.97 102.40 -5.43 0.80 N 12 1 "O4'" C DG 110 ? ? "C1'" C DG 110 ? ? N9 C DG 110 ? ? 110.47 108.30 2.17 0.30 N 13 1 "O4'" D DT 101 ? ? "C1'" D DT 101 ? ? N1 D DT 101 ? ? 110.31 108.30 2.01 0.30 N 14 1 "C3'" D DG 105 ? ? "C2'" D DG 105 ? ? "C1'" D DG 105 ? ? 96.56 102.40 -5.84 0.80 N 15 1 "C3'" D DC 108 ? ? "C2'" D DC 108 ? ? "C1'" D DC 108 ? ? 96.17 102.40 -6.23 0.80 N 16 1 "O4'" D DC 108 ? ? "C1'" D DC 108 ? ? N1 D DC 108 ? ? 111.95 108.30 3.65 0.30 N 17 1 "C1'" D DA 109 ? ? "O4'" D DA 109 ? ? "C4'" D DA 109 ? ? 102.52 110.10 -7.58 1.00 N 18 1 "C3'" D DA 109 ? ? "C2'" D DA 109 ? ? "C1'" D DA 109 ? ? 93.96 102.40 -8.44 0.80 N 19 1 "O4'" D DA 109 ? ? "C1'" D DA 109 ? ? N9 D DA 109 ? ? 115.36 108.30 7.06 0.30 N 20 1 "O4'" D DG 110 ? ? "C1'" D DG 110 ? ? N9 D DG 110 ? ? 110.66 108.30 2.36 0.30 N # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x-y,x,z+1/2 3 y,-x+y,z+1/2 4 -y,x-y,z 5 -x+y,-x,z 6 -x,-y,z+1/2 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -86.739513007 26.090345863 4.61633103861 5.11354604328 ? -0.797393744284 ? -3.37708367921 ? 5.75035857109 ? 0.668253908528 ? 7.66500041222 ? 2.83793799491 ? 3.57453259364 ? 0.544859530556 ? 6.97640689026 ? 2.12784063067 ? 0.638621477947 ? -3.73231017384 ? 3.92177998223 ? 0.179835190031 ? -0.0500570707082 ? 9.47533154561 ? -3.36798589748 ? -0.625841346986 ? -1.11715444447 ? -0.693546052135 ? 2 'X-RAY DIFFRACTION' ? refined -93.4193458609 34.3974591275 9.21196563025 4.63255915983 ? 1.71902673625 ? 0.301562424704 ? 3.9767431249 ? -0.286559365688 ? 6.61212989993 ? 6.24812854709 ? -1.99630215378 ? 3.13543722411 ? 1.10813579532 ? 1.00717408799 ? 9.65316144181 ? -2.54278319228 ? -0.409715094073 ? -0.187308342802 ? 2.67873905175 ? 2.90287335438 ? 7.16379557348 ? -3.73364284263 ? 1.03641287708 ? 0.398344803373 ? 3 'X-RAY DIFFRACTION' ? refined -98.4714825618 11.7766151265 12.7339562021 5.9003644298 ? -1.16894409644 ? -0.159328066879 ? 4.0483935175 ? -0.0140634439635 ? 3.94594680552 ? 8.17570252081 ? -4.82412250852 ? 7.07409172736 ? 7.73763664747 ? -3.20361648523 ? 6.53916829501 ? -2.0462814846 ? -1.19389012963 ? 2.08580008831 ? 3.74437282091 ? 1.58308405944 ? -4.58065854943 ? 0.945562696112 ? -4.56161512148 ? -0.413446172373 ? 4 'X-RAY DIFFRACTION' ? refined -105.32566851 20.8217821625 16.5930171593 3.56368469678 ? 0.678008669768 ? -2.23686670648 ? 4.70469823457 ? 0.241167721154 ? 9.8161829146 ? 0.694550211843 ? -0.252316892971 ? -2.24592093936 ? 0.0734667047372 ? 0.736394762733 ? 7.04383342993 ? -3.00589359369 ? -0.622889862134 ? 4.9386044619 ? 1.31251056017 ? 2.53809336575 ? -0.338838644782 ? -0.180523416374 ? -0.196954394549 ? -3.75897447288 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 A ? A 101 ? A ? A 119 ? ? ;(chain 'A' and resid 101 through 119) ; 2 'X-RAY DIFFRACTION' 2 B ? B 101 ? B ? B 118 ? ? ;(chain 'B' and resid 101 through 118) ; 3 'X-RAY DIFFRACTION' 3 C ? C 101 ? C ? C 113 ? ? ;(chain 'C' and resid 101 through 113) ; 4 'X-RAY DIFFRACTION' 4 D ? D 101 ? D ? D 112 ? ? ;(chain 'D' and resid 101 through 112) ; # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8SJS 'double helix' 8SJS 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 3 1_555 C DC 13 1_555 -0.149 -0.025 0.240 2.746 4.328 3.457 1 A_DG103:DC113_C A 103 ? C 113 ? 19 1 1 A DA 4 1_555 C DT 12 1_555 -0.102 0.401 -1.407 -36.902 -23.651 27.610 2 A_DA104:DT112_C A 104 ? C 112 ? ? 1 1 A DG 5 1_555 C DC 11 1_555 -0.435 -0.605 -2.043 -26.280 -12.253 8.719 3 A_DG105:DC111_C A 105 ? C 111 ? 19 1 1 A DC 6 1_555 C DG 10 1_555 0.557 0.719 -1.102 -3.290 -9.694 29.799 4 A_DC106:DG110_C A 106 ? C 110 ? ? 1 1 A DC 7 1_555 C DG 9 1_555 0.071 -0.322 -0.640 -9.200 -6.142 -1.389 5 A_DC107:DG109_C A 107 ? C 109 ? 19 1 1 A DT 8 1_555 B DA 12 1_555 0.067 -0.539 1.168 -3.662 -2.612 0.676 6 A_DT108:DA112_B A 108 ? B 112 ? 20 1 1 A DG 9 1_555 B DC 11 1_555 0.019 -0.136 1.360 9.714 -5.887 -1.442 7 A_DG109:DC111_B A 109 ? B 111 ? 19 1 1 A DA 10 1_555 B DT 10 1_555 0.033 -0.034 0.511 -2.621 -4.952 2.735 8 A_DA110:DT110_B A 110 ? B 110 ? 20 1 1 A DC 11 1_555 B DG 9 1_555 0.159 -0.075 0.655 6.649 -5.978 1.087 9 A_DC111:DG109_B A 111 ? B 109 ? 19 1 1 A DA 12 1_555 B DT 8 1_555 0.272 0.249 0.542 0.088 -8.002 5.560 10 A_DA112:DT108_B A 112 ? B 108 ? 20 1 1 A DT 13 1_555 B DA 7 1_555 -0.153 -0.260 0.661 6.145 -11.186 -8.404 11 A_DT113:DA107_B A 113 ? B 107 ? 20 1 1 A DA 14 1_555 B DT 6 1_555 0.213 -0.532 -1.499 -7.187 -8.857 2.076 12 A_DA114:DT106_B A 114 ? B 106 ? 20 1 1 A DC 15 1_555 B DG 5 1_555 0.215 -0.355 -0.706 -5.526 -9.535 1.802 13 A_DC115:DG105_B A 115 ? B 105 ? 19 1 1 A DC 16 1_555 B DG 4 1_555 0.277 -0.153 -0.832 6.051 -7.228 1.135 14 A_DC116:DG104_B A 116 ? B 104 ? 19 1 1 A DG 17 1_555 B DC 3 1_555 -0.193 -0.172 0.903 21.854 -10.082 -1.178 15 A_DG117:DC103_B A 117 ? B 103 ? 19 1 1 A DC 18 1_555 B DG 2 1_555 2.537 -0.396 1.475 -3.359 -13.595 11.019 16 A_DC118:DG102_B A 118 ? B 102 ? ? 1 1 A DA 19 1_555 B DT 1 1_555 0.537 0.234 0.561 6.756 -22.789 -11.811 17 A_DA119:DT101_B A 119 ? B 101 ? 20 1 1 C DG 2 1_555 D DG 12 1_555 0.168 0.948 -1.153 -11.435 -24.479 -3.470 18 C_DG102:DG112_D C 102 ? D 112 ? 3 1 1 C DC 5 1_555 D DG 10 1_555 0.264 -0.359 1.235 9.888 -0.125 11.477 19 C_DC105:DG110_D C 105 ? D 110 ? 19 1 1 C DT 6 1_555 D DA 9 1_555 0.012 -0.513 1.804 11.954 -5.006 -8.789 20 C_DT106:DA109_D C 106 ? D 109 ? 20 1 1 C DG 7 1_555 D DC 8 1_555 -0.158 0.014 0.881 8.499 -8.513 3.641 21 C_DG107:DC108_D C 107 ? D 108 ? 19 1 1 C DT 8 1_555 D DA 7 1_555 -0.170 0.147 0.069 3.040 -15.125 5.835 22 C_DT108:DA107_D C 108 ? D 107 ? 20 1 1 B DC 13 1_555 D DG 6 1_555 0.100 0.299 0.233 1.752 -8.602 -10.029 23 B_DC113:DG106_D B 113 ? D 106 ? 19 1 1 B DC 14 1_555 D DG 5 1_555 -0.077 0.080 0.561 -2.377 -16.761 1.745 24 B_DC114:DG105_D B 114 ? D 105 ? 19 1 1 B DA 15 1_555 D DT 4 1_555 0.194 -0.673 -1.745 -6.557 -10.248 -10.749 25 B_DA115:DT104_D B 115 ? D 104 ? 20 1 1 B DC 16 1_555 D DG 3 1_555 3.354 -1.125 -1.828 10.179 -10.280 -19.042 26 B_DC116:DG103_D B 116 ? D 103 ? ? ? 1 B DG 17 1_555 D DC 2 1_555 -0.255 -0.044 -0.342 -7.144 -7.526 -1.906 27 B_DG117:DC102_D B 117 ? D 102 ? 19 1 1 B DA 18 1_555 D DT 1 1_555 0.433 -0.822 -1.676 -7.243 0.547 3.712 28 B_DA118:DT101_D B 118 ? D 101 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 3 1_555 C DC 13 1_555 A DA 4 1_555 C DT 12 1_555 0.365 -0.264 4.276 7.649 26.056 35.479 -3.523 0.450 3.358 36.847 -10.817 44.412 1 AA_DG103DA104:DT112DC113_CC A 103 ? C 113 ? A 104 ? C 112 ? 1 A DA 4 1_555 C DT 12 1_555 A DG 5 1_555 C DC 11 1_555 -1.278 1.499 2.777 -6.959 9.333 25.525 0.933 1.027 3.338 19.859 14.808 28.014 2 AA_DA104DG105:DC111DT112_CC A 104 ? C 112 ? A 105 ? C 111 ? 1 A DG 5 1_555 C DC 11 1_555 A DC 6 1_555 C DG 10 1_555 1.908 0.863 3.011 -7.396 -5.131 37.192 1.865 -3.704 2.464 -7.904 11.392 38.228 3 AA_DG105DC106:DG110DC111_CC A 105 ? C 111 ? A 106 ? C 110 ? 1 A DC 6 1_555 C DG 10 1_555 A DC 7 1_555 C DG 9 1_555 -2.510 0.804 3.617 -20.123 -9.853 50.304 1.604 1.238 4.069 -10.987 22.440 54.770 4 AA_DC106DC107:DG109DG110_CC A 106 ? C 110 ? A 107 ? C 109 ? 1 A DC 7 1_555 C DG 9 1_555 A DT 8 1_555 B DA 12 1_555 1.243 -3.035 3.064 -3.327 19.985 21.177 -8.420 -2.865 0.040 43.597 7.257 29.227 5 AA_DC107DT108:DA112DG109_BC A 107 ? C 109 ? A 108 ? B 112 ? 1 A DT 8 1_555 B DA 12 1_555 A DG 9 1_555 B DC 11 1_555 -0.585 0.750 3.364 -1.538 8.486 30.364 -0.301 0.772 3.467 15.805 2.865 31.537 6 AA_DT108DG109:DC111DA112_BB A 108 ? B 112 ? A 109 ? B 111 ? 1 A DG 9 1_555 B DC 11 1_555 A DA 10 1_555 B DT 10 1_555 -0.230 0.906 3.586 1.600 -0.187 41.098 1.312 0.516 3.571 -0.267 -2.278 41.128 7 AA_DG109DA110:DT110DC111_BB A 109 ? B 111 ? A 110 ? B 110 ? 1 A DA 10 1_555 B DT 10 1_555 A DC 11 1_555 B DG 9 1_555 -1.094 -0.753 2.768 -1.220 3.391 34.552 -1.697 1.675 2.720 5.689 2.046 34.734 8 AA_DA110DC111:DG109DT110_BB A 110 ? B 110 ? A 111 ? B 109 ? 1 A DC 11 1_555 B DG 9 1_555 A DA 12 1_555 B DT 8 1_555 0.363 -1.209 3.322 -0.350 -2.601 30.865 -1.747 -0.749 3.405 -4.877 0.657 30.973 9 AA_DC111DA112:DT108DG109_BB A 111 ? B 109 ? A 112 ? B 108 ? 1 A DA 12 1_555 B DT 8 1_555 A DT 13 1_555 B DA 7 1_555 -0.784 -0.885 2.945 -5.332 -6.113 35.065 -0.614 0.554 3.132 -9.981 8.707 35.962 10 AA_DA112DT113:DA107DT108_BB A 112 ? B 108 ? A 113 ? B 107 ? 1 A DT 13 1_555 B DA 7 1_555 A DA 14 1_555 B DT 6 1_555 0.835 -0.868 3.683 9.221 1.874 38.576 -1.531 0.008 3.733 2.786 -13.710 39.665 11 AA_DT113DA114:DT106DA107_BB A 113 ? B 107 ? A 114 ? B 106 ? 1 A DA 14 1_555 B DT 6 1_555 A DC 15 1_555 B DG 5 1_555 0.029 -0.787 3.042 -4.765 -0.996 34.754 -1.166 -0.715 3.033 -1.657 7.929 35.083 12 AA_DA114DC115:DG105DT106_BB A 114 ? B 106 ? A 115 ? B 105 ? 1 A DC 15 1_555 B DG 5 1_555 A DC 16 1_555 B DG 4 1_555 0.734 0.173 2.670 6.663 1.318 31.547 0.114 -0.325 2.767 2.390 -12.080 32.251 13 AA_DC115DC116:DG104DG105_BB A 115 ? B 105 ? A 116 ? B 104 ? 1 A DC 16 1_555 B DG 4 1_555 A DG 17 1_555 B DC 3 1_555 -1.782 -1.068 2.638 -29.380 12.869 26.452 -2.895 -0.633 2.626 20.655 47.158 41.353 14 AA_DC116DG117:DC103DG104_BB A 116 ? B 104 ? A 117 ? B 103 ? 1 A DG 17 1_555 B DC 3 1_555 A DC 18 1_555 B DG 2 1_555 2.345 -1.155 4.358 7.310 -1.291 38.408 -1.508 -2.271 4.744 -1.941 -10.987 39.092 15 AA_DG117DC118:DG102DC103_BB A 117 ? B 103 ? A 118 ? B 102 ? 1 A DC 18 1_555 B DG 2 1_555 A DA 19 1_555 B DT 1 1_555 -2.259 1.304 2.527 5.379 -2.327 28.222 2.982 5.372 1.960 -4.709 -10.883 28.812 16 AA_DC118DA119:DT101DG102_BB A 118 ? B 102 ? A 119 ? B 101 ? 1 C DG 2 1_555 D DG 12 1_555 C DC 5 1_555 D DG 10 1_555 1.037 0.560 7.140 -5.104 6.711 87.244 0.089 -0.989 7.105 4.854 3.692 87.569 17 CC_DG102DC105:DG110DG112_DD C 102 ? D 112 ? C 105 ? D 110 ? 1 C DC 5 1_555 D DG 10 1_555 C DT 6 1_555 D DA 9 1_555 -0.738 -0.130 3.600 5.440 0.687 38.295 -0.288 1.840 3.464 1.041 -8.241 38.671 18 CC_DC105DT106:DA109DG110_DD C 105 ? D 110 ? C 106 ? D 109 ? 1 C DT 6 1_555 D DA 9 1_555 C DG 7 1_555 D DC 8 1_555 0.678 0.647 3.397 2.493 -0.044 37.249 1.017 -0.715 3.433 -0.069 -3.897 37.330 19 CC_DT106DG107:DC108DA109_DD C 106 ? D 109 ? C 107 ? D 108 ? 1 C DG 7 1_555 D DC 8 1_555 C DT 8 1_555 D DA 7 1_555 -0.634 -1.047 3.055 2.381 4.669 28.641 -3.005 1.732 2.792 9.339 -4.762 29.106 20 CC_DG107DT108:DA107DC108_DD C 107 ? D 108 ? C 108 ? D 107 ? 1 C DT 8 1_555 D DA 7 1_555 B DC 13 1_555 D DG 6 1_555 0.458 -0.262 3.261 7.241 9.644 25.757 -2.763 0.740 2.991 20.279 -15.226 28.397 21 CB_DT108DC113:DG106DA107_DD C 108 ? D 107 ? B 113 ? D 106 ? 1 B DC 13 1_555 D DG 6 1_555 B DC 14 1_555 D DG 5 1_555 0.244 -1.230 3.108 -5.143 4.486 39.228 -2.289 -0.910 2.902 6.621 7.590 39.794 22 BB_DC113DC114:DG105DG106_DD B 113 ? D 106 ? B 114 ? D 105 ? 1 B DC 14 1_555 D DG 5 1_555 B DA 15 1_555 D DT 4 1_555 -1.554 0.856 4.047 -2.983 -0.968 30.240 1.877 2.212 4.149 -1.849 5.698 30.398 23 BB_DC114DA115:DT104DG105_DD B 114 ? D 105 ? B 115 ? D 104 ? 1 B DA 15 1_555 D DT 4 1_555 B DC 16 1_555 D DG 3 1_555 0.050 -0.809 2.842 -4.292 -0.692 43.869 -1.022 -0.418 2.837 -0.924 5.729 44.073 24 BB_DA115DC116:DG103DT104_DD B 115 ? D 104 ? B 116 ? D 103 ? 1 B DC 16 1_555 D DG 3 1_555 B DG 17 1_555 D DC 2 1_555 -0.262 0.887 3.157 -8.837 20.051 24.676 -2.144 -1.173 2.985 38.593 17.008 32.888 25 BB_DC116DG117:DC102DG103_DD B 116 ? D 103 ? B 117 ? D 102 ? 1 B DG 17 1_555 D DC 2 1_555 B DA 18 1_555 D DT 1 1_555 -0.200 0.761 3.475 3.670 -3.811 44.191 1.374 0.620 3.375 -5.045 -4.857 44.490 26 BB_DG117DA118:DT101DC102_DD B 117 ? D 102 ? B 118 ? D 101 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Office of Naval Research (ONR)' 'United States' N000141912596 1 'Department of Energy (DOE, United States)' 'United States' DE-SC0007991 2 'National Science Foundation (NSF, United States)' 'United States' 2106790 3 'Human Frontier Science Program (HFSP)' France RPG0010/2017 4 'National Science Foundation (NSF, United States)' 'United States' DMR-1420073 5 'National Aeronautic Space Administration (NASA, United States)' 'United States' '2020 NASA Center Innovation Fund' 6 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5W6W _pdbx_initial_refinement_model.details 'tensegrity triangle' # _space_group.name_H-M_alt 'P 63' _space_group.name_Hall 'P 6c' _space_group.IT_number 173 _space_group.crystal_system hexagonal _space_group.id 1 # _atom_sites.entry_id 8SJS _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.005149 _atom_sites.fract_transf_matrix[1][2] 0.002973 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.005946 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018039 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 5.96793 ? ? ? 14.89577 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 6.96715 ? ? ? 11.43723 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 14.90797 ? ? ? 11.91318 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_