data_8AOU # _entry.id 8AOU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.366 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8AOU pdb_00008aou 10.2210/pdb8aou/pdb WWPDB D_1292124790 ? ? BMRB 34748 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type BMRB 'Backbone chemical shift assignment' 50620 unspecified BMRB 'Solution NMR structure of full-length Nsp1 from SARS-CoV-2' 34748 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 8AOU _pdbx_database_status.recvd_initial_deposition_date 2022-08-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Wang, Y.' 1 0000-0002-5645-0209 'Kirkpatrick, J.P.' 2 0000-0002-9761-3377 'Carlomagno, T.' 3 0000-0002-2437-2760 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_patent _citation.unpublished_flag ? ? ? ? ? ? ? UK ? ? primary Structure STRUE6 2005 0969-2126 ? ? 31 ? 128 ? 'Structural insights into the activity regulation of full-length non-structural protein 1 from SARS-CoV-2.' 2023 ? 10.1016/j.str.2022.12.006 36610391 ? ? ? ? ? ? ? ? ? NE ? ? 1 'Biomol NMR Assign' ? ? 1874-2718 ? ? 15 ? 287 295 '1H, 13C and 15N backbone chemical-shift assignments of SARS-CoV-2 non-structural protein 1 (leader protein)' 2021 ? 10.1007/s12104-021-10019-6 33770349 ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, Y.' 1 ? primary 'Kirkpatrick, J.' 2 ? primary 'Lage, S.Z.' 3 ? primary 'Carlomagno, T.' 4 ? 1 'Wang, Y.' 5 0000-0002-5645-0209 1 'Kirkpatrick, J.' 6 0000-0002-9761-3377 1 'zur Lage, S.' 7 0000-0002-6834-2029 1 'Korn, S.' 8 ? 1 'Neissner, K.' 9 ? 1 'Schwalbe, H.' 10 ? 1 'Schlundt, A.' 11 ? 1 'Carlomagno, T.' 12 0000-0002-2437-2760 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Host translation inhibitor nsp1' _entity.formula_weight 19929.414 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ;The first two residues (GA) in the protein construct used are cloning artifacts. Therefore, the appropriate residue numbering has the first residue (G) designated as residue-number '-1', so that the third residue has residue-number '1'. ; # _entity_name_com.entity_id 1 _entity_name_com.name 'Leader protein,Non-structural protein 1,nsp1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GAMESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGVLPQLEQPYVFIKRSDART APHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQ ENWNTKHSSGVTRELMRELNGG ; _entity_poly.pdbx_seq_one_letter_code_can ;GAMESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGVLPQLEQPYVFIKRSDART APHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQ ENWNTKHSSGVTRELMRELNGG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 GLU n 1 5 SER n 1 6 LEU n 1 7 VAL n 1 8 PRO n 1 9 GLY n 1 10 PHE n 1 11 ASN n 1 12 GLU n 1 13 LYS n 1 14 THR n 1 15 HIS n 1 16 VAL n 1 17 GLN n 1 18 LEU n 1 19 SER n 1 20 LEU n 1 21 PRO n 1 22 VAL n 1 23 LEU n 1 24 GLN n 1 25 VAL n 1 26 ARG n 1 27 ASP n 1 28 VAL n 1 29 LEU n 1 30 VAL n 1 31 ARG n 1 32 GLY n 1 33 PHE n 1 34 GLY n 1 35 ASP n 1 36 SER n 1 37 VAL n 1 38 GLU n 1 39 GLU n 1 40 VAL n 1 41 LEU n 1 42 SER n 1 43 GLU n 1 44 ALA n 1 45 ARG n 1 46 GLN n 1 47 HIS n 1 48 LEU n 1 49 LYS n 1 50 ASP n 1 51 GLY n 1 52 THR n 1 53 CYS n 1 54 GLY n 1 55 LEU n 1 56 VAL n 1 57 GLU n 1 58 VAL n 1 59 GLU n 1 60 LYS n 1 61 GLY n 1 62 VAL n 1 63 LEU n 1 64 PRO n 1 65 GLN n 1 66 LEU n 1 67 GLU n 1 68 GLN n 1 69 PRO n 1 70 TYR n 1 71 VAL n 1 72 PHE n 1 73 ILE n 1 74 LYS n 1 75 ARG n 1 76 SER n 1 77 ASP n 1 78 ALA n 1 79 ARG n 1 80 THR n 1 81 ALA n 1 82 PRO n 1 83 HIS n 1 84 GLY n 1 85 HIS n 1 86 VAL n 1 87 MET n 1 88 VAL n 1 89 GLU n 1 90 LEU n 1 91 VAL n 1 92 ALA n 1 93 GLU n 1 94 LEU n 1 95 GLU n 1 96 GLY n 1 97 ILE n 1 98 GLN n 1 99 TYR n 1 100 GLY n 1 101 ARG n 1 102 SER n 1 103 GLY n 1 104 GLU n 1 105 THR n 1 106 LEU n 1 107 GLY n 1 108 VAL n 1 109 LEU n 1 110 VAL n 1 111 PRO n 1 112 HIS n 1 113 VAL n 1 114 GLY n 1 115 GLU n 1 116 ILE n 1 117 PRO n 1 118 VAL n 1 119 ALA n 1 120 TYR n 1 121 ARG n 1 122 LYS n 1 123 VAL n 1 124 LEU n 1 125 LEU n 1 126 ARG n 1 127 LYS n 1 128 ASN n 1 129 GLY n 1 130 ASN n 1 131 LYS n 1 132 GLY n 1 133 ALA n 1 134 GLY n 1 135 GLY n 1 136 HIS n 1 137 SER n 1 138 TYR n 1 139 GLY n 1 140 ALA n 1 141 ASP n 1 142 LEU n 1 143 LYS n 1 144 SER n 1 145 PHE n 1 146 ASP n 1 147 LEU n 1 148 GLY n 1 149 ASP n 1 150 GLU n 1 151 LEU n 1 152 GLY n 1 153 THR n 1 154 ASP n 1 155 PRO n 1 156 TYR n 1 157 GLU n 1 158 ASP n 1 159 PHE n 1 160 GLN n 1 161 GLU n 1 162 ASN n 1 163 TRP n 1 164 ASN n 1 165 THR n 1 166 LYS n 1 167 HIS n 1 168 SER n 1 169 SER n 1 170 GLY n 1 171 VAL n 1 172 THR n 1 173 ARG n 1 174 GLU n 1 175 LEU n 1 176 MET n 1 177 ARG n 1 178 GLU n 1 179 LEU n 1 180 ASN n 1 181 GLY n 1 182 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 182 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'rep, 1a-1b' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Severe acute respiratory syndrome coronavirus 2' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2697049 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pETM11 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code R1AB_SARS2 _struct_ref.pdbx_db_accession P0DTD1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGVLPQLEQPYVFIKRSDARTAP HGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQEN WNTKHSSGVTRELMRELNGG ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8AOU _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 182 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0DTD1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 180 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 180 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8AOU GLY A 1 ? UNP P0DTD1 ? ? 'expression tag' -1 1 1 8AOU ALA A 2 ? UNP P0DTD1 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-15N HSQC' 1 isotropic 2 1 1 '2D 1H-15N HSQC' 2 isotropic 3 1 1 '3D HNCO' 1 isotropic 4 1 1 '3D HNCO' 2 isotropic 5 1 1 '3D HNCA' 2 isotropic 6 1 1 '3D HNCACB' 2 isotropic 7 1 1 '3D HN(CO)CA' 1 isotropic 8 1 1 '3D HN(COCA)CB' 1 isotropic 9 1 1 '3D HN(CA)CO' 1 isotropic 10 1 1 '3D HCCH-TOCSY' 2 isotropic 11 1 1 '3D H(CCO)NH' 1 isotropic 12 1 1 '3D HBHA(CO)NH' 1 isotropic 13 1 1 '3D HA(CO)NH' 1 isotropic 14 1 1 '3D HC(C)H-TOCSY (aromatics)' 1 isotropic 15 1 1 '3D (H)CCH-TOCSY (aromatics)' 1 isotropic 16 1 1 '2D (HB)CB(CGCD)HD' 1 isotropic 17 1 1 '2D (HB)CB(CGCDCE)HE' 1 isotropic 18 1 1 '2D 1H-13C HSQC' 1 isotropic 19 1 1 '2D 1H-13C HSQC' 2 isotropic 20 1 1 '2D CT 1H-13C HSQC (aliphatics)' 2 isotropic 21 1 1 '2D CT 1H-13C HSQC (aromatics)' 2 isotropic 22 1 2 '2D CT 1H-13C HSQC (methyls)' 2 isotropic 23 1 1 '3D NOESY-15N HSQC' 2 isotropic 24 1 1 '3D NOESY-13C HSQC' 2 isotropic 25 1 2 CLEANEX 2 isotropic 26 1 2 '2D SCT 1H-15N HSQC' 2 isotropic 27 1 2 '2D 1H-15N TROSY-HSQC' 2 isotropic 28 1 2 '2D IPAP 1H-15N HSQC' 2 isotropic 29 1 3 '2D SCT 1H-15N HSQC' 2 anisotropic 30 1 3 '2D 1H-15N TROSY-HSQC' 2 anisotropic 31 1 3 '2D IPAP 1H-15N HSQC' 2 anisotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 560 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err 20 _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label conditions_1 _pdbx_nmr_exptl_sample_conditions.pH_err 0.1 _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err 0.2 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 ;600 uM [U-13C; U-15N] Nsp1, 50 mM sodium phosphate, 200 mM sodium chloride, 2 mM DTT, 2 mM EDTA, 0.01 % w/v sodium azide, 10 % v/v [U-2H] D2O, 90% H2O/10% D2O ; '90% H2O/10% D2O' 13C15N_sample solution 'Main sample used for assignment and collection of distance restraints.' 2 ;500 uM [U-10% 13C; U-100% 15N] Nsp1, 50 mM sodium phosphate, 200 mM sodium chloride, 2 mM DTT, 2 mM EDTA, 0.01 % w/v sodium azide, 10 % v/v [U-2H] D2O, 90% H2O/10% D2O ; '90% H2O/10% D2O' 10%-13C_U-15N_sample solution ;Sample used for stereospecific assignment of Leu and Val methyl groups, CLEANEX, and measurement of isotropic N-H splittings for RDCs. ; 3 ;500 uM [U-10% 13C; U-100% 15N] Nsp1, 50 mM sodium phosphate, 200 mM sodium chloride, 2 mM DTT, 2 mM EDTA, 0.01 % w/w sodium azide, 10 % v/v [U-2H] D2O, 12 mg/mL Pf1 phage, 90% H2O/10% D2O ; '90% H2O/10% D2O' 10%-13C_U-15N_aligned_sample 'filamentous virus' 'Measurement of anisotropic N-H splittings for RDCs.' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 'AVANCE III HD' ? Bruker 600 'Equipped with N2-cooled cryogenic inverse HCN probehead' 2 'AVANCE III HD' ? Bruker 850 'Equpped with He-cooled cryogenic inverse HCN probehead' # loop_ _pdbx_nmr_refine.entry_id _pdbx_nmr_refine.method _pdbx_nmr_refine.details _pdbx_nmr_refine.software_ordinal 8AOU 'simulated annealing' ? 1 8AOU 'torsion angle dynamics' ? 2 8AOU 'molecular dynamics' ? 3 # _pdbx_nmr_ensemble.entry_id 8AOU _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 8AOU _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 collection TopSpin 3.2 'Bruker Biospin' 2 processing NMRPipe 10.1 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 3 'chemical shift assignment' 'CcpNmr Analysis' 2.4 CCPN 4 'peak picking' 'CcpNmr Analysis' 2.4 CCPN 5 'data analysis' 'CcpNmr Analysis' 2.4 CCPN 6 'structure calculation' ARIA 2.3 ;Linge, O'Donoghue and Nilges ; 7 'structure calculation' CNS 1.21 'Brunger, Adams, Clore, Gros, Nilges and Read' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8AOU _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 8AOU _struct.title 'Solution NMR structure of full-length Nsp1 from SARS-CoV-2.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8AOU _struct_keywords.text 'Non-structural protein Host translation inhibitor, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 36 ? GLY A 51 ? SER A 34 GLY A 49 1 ? 16 HELX_P HELX_P2 AA2 VAL A 62 ? LEU A 66 ? VAL A 60 LEU A 64 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLN 68 A . ? GLN 66 A PRO 69 A ? PRO 67 A 1 -2.19 2 GLN 68 A . ? GLN 66 A PRO 69 A ? PRO 67 A 2 1.13 3 GLN 68 A . ? GLN 66 A PRO 69 A ? PRO 67 A 3 -3.09 4 GLN 68 A . ? GLN 66 A PRO 69 A ? PRO 67 A 4 -1.11 5 GLN 68 A . ? GLN 66 A PRO 69 A ? PRO 67 A 5 -3.28 6 GLN 68 A . ? GLN 66 A PRO 69 A ? PRO 67 A 6 1.05 7 GLN 68 A . ? GLN 66 A PRO 69 A ? PRO 67 A 7 -6.16 8 GLN 68 A . ? GLN 66 A PRO 69 A ? PRO 67 A 8 -0.44 9 GLN 68 A . ? GLN 66 A PRO 69 A ? PRO 67 A 9 -1.43 10 GLN 68 A . ? GLN 66 A PRO 69 A ? PRO 67 A 10 -1.34 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? parallel AA1 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 HIS A 15 ? VAL A 22 ? HIS A 13 VAL A 20 AA1 2 CYS A 53 ? VAL A 56 ? CYS A 51 VAL A 54 AA1 3 THR A 105 ? PRO A 111 ? THR A 103 PRO A 109 AA1 4 TYR A 70 ? ARG A 75 ? TYR A 68 ARG A 73 AA1 5 HIS A 85 ? GLU A 93 ? HIS A 83 GLU A 91 AA1 6 ALA A 119 ? ARG A 126 ? ALA A 117 ARG A 124 AA1 7 HIS A 15 ? VAL A 22 ? HIS A 13 VAL A 20 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PRO A 21 ? N PRO A 19 O LEU A 55 ? O LEU A 53 AA1 2 3 N VAL A 56 ? N VAL A 54 O VAL A 108 ? O VAL A 106 AA1 3 4 O LEU A 109 ? O LEU A 107 N VAL A 71 ? N VAL A 69 AA1 4 5 N LYS A 74 ? N LYS A 72 O GLU A 89 ? O GLU A 87 AA1 5 6 N VAL A 86 ? N VAL A 84 O LEU A 124 ? O LEU A 122 AA1 6 7 O ALA A 119 ? O ALA A 117 N VAL A 22 ? N VAL A 20 # _atom_sites.entry_id 8AOU _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 ALA 2 0 0 ALA ALA A . n A 1 3 MET 3 1 1 MET MET A . n A 1 4 GLU 4 2 2 GLU GLU A . n A 1 5 SER 5 3 3 SER SER A . n A 1 6 LEU 6 4 4 LEU LEU A . n A 1 7 VAL 7 5 5 VAL VAL A . n A 1 8 PRO 8 6 6 PRO PRO A . n A 1 9 GLY 9 7 7 GLY GLY A . n A 1 10 PHE 10 8 8 PHE PHE A . n A 1 11 ASN 11 9 9 ASN ASN A . n A 1 12 GLU 12 10 10 GLU GLU A . n A 1 13 LYS 13 11 11 LYS LYS A . n A 1 14 THR 14 12 12 THR THR A . n A 1 15 HIS 15 13 13 HIS HIS A . n A 1 16 VAL 16 14 14 VAL VAL A . n A 1 17 GLN 17 15 15 GLN GLN A . n A 1 18 LEU 18 16 16 LEU LEU A . n A 1 19 SER 19 17 17 SER SER A . n A 1 20 LEU 20 18 18 LEU LEU A . n A 1 21 PRO 21 19 19 PRO PRO A . n A 1 22 VAL 22 20 20 VAL VAL A . n A 1 23 LEU 23 21 21 LEU LEU A . n A 1 24 GLN 24 22 22 GLN GLN A . n A 1 25 VAL 25 23 23 VAL VAL A . n A 1 26 ARG 26 24 24 ARG ARG A . n A 1 27 ASP 27 25 25 ASP ASP A . n A 1 28 VAL 28 26 26 VAL VAL A . n A 1 29 LEU 29 27 27 LEU LEU A . n A 1 30 VAL 30 28 28 VAL VAL A . n A 1 31 ARG 31 29 29 ARG ARG A . n A 1 32 GLY 32 30 30 GLY GLY A . n A 1 33 PHE 33 31 31 PHE PHE A . n A 1 34 GLY 34 32 32 GLY GLY A . n A 1 35 ASP 35 33 33 ASP ASP A . n A 1 36 SER 36 34 34 SER SER A . n A 1 37 VAL 37 35 35 VAL VAL A . n A 1 38 GLU 38 36 36 GLU GLU A . n A 1 39 GLU 39 37 37 GLU GLU A . n A 1 40 VAL 40 38 38 VAL VAL A . n A 1 41 LEU 41 39 39 LEU LEU A . n A 1 42 SER 42 40 40 SER SER A . n A 1 43 GLU 43 41 41 GLU GLU A . n A 1 44 ALA 44 42 42 ALA ALA A . n A 1 45 ARG 45 43 43 ARG ARG A . n A 1 46 GLN 46 44 44 GLN GLN A . n A 1 47 HIS 47 45 45 HIS HIS A . n A 1 48 LEU 48 46 46 LEU LEU A . n A 1 49 LYS 49 47 47 LYS LYS A . n A 1 50 ASP 50 48 48 ASP ASP A . n A 1 51 GLY 51 49 49 GLY GLY A . n A 1 52 THR 52 50 50 THR THR A . n A 1 53 CYS 53 51 51 CYS CYS A . n A 1 54 GLY 54 52 52 GLY GLY A . n A 1 55 LEU 55 53 53 LEU LEU A . n A 1 56 VAL 56 54 54 VAL VAL A . n A 1 57 GLU 57 55 55 GLU GLU A . n A 1 58 VAL 58 56 56 VAL VAL A . n A 1 59 GLU 59 57 57 GLU GLU A . n A 1 60 LYS 60 58 58 LYS LYS A . n A 1 61 GLY 61 59 59 GLY GLY A . n A 1 62 VAL 62 60 60 VAL VAL A . n A 1 63 LEU 63 61 61 LEU LEU A . n A 1 64 PRO 64 62 62 PRO PRO A . n A 1 65 GLN 65 63 63 GLN GLN A . n A 1 66 LEU 66 64 64 LEU LEU A . n A 1 67 GLU 67 65 65 GLU GLU A . n A 1 68 GLN 68 66 66 GLN GLN A . n A 1 69 PRO 69 67 67 PRO PRO A . n A 1 70 TYR 70 68 68 TYR TYR A . n A 1 71 VAL 71 69 69 VAL VAL A . n A 1 72 PHE 72 70 70 PHE PHE A . n A 1 73 ILE 73 71 71 ILE ILE A . n A 1 74 LYS 74 72 72 LYS LYS A . n A 1 75 ARG 75 73 73 ARG ARG A . n A 1 76 SER 76 74 74 SER SER A . n A 1 77 ASP 77 75 75 ASP ASP A . n A 1 78 ALA 78 76 76 ALA ALA A . n A 1 79 ARG 79 77 77 ARG ARG A . n A 1 80 THR 80 78 78 THR THR A . n A 1 81 ALA 81 79 79 ALA ALA A . n A 1 82 PRO 82 80 80 PRO PRO A . n A 1 83 HIS 83 81 81 HIS HIS A . n A 1 84 GLY 84 82 82 GLY GLY A . n A 1 85 HIS 85 83 83 HIS HIS A . n A 1 86 VAL 86 84 84 VAL VAL A . n A 1 87 MET 87 85 85 MET MET A . n A 1 88 VAL 88 86 86 VAL VAL A . n A 1 89 GLU 89 87 87 GLU GLU A . n A 1 90 LEU 90 88 88 LEU LEU A . n A 1 91 VAL 91 89 89 VAL VAL A . n A 1 92 ALA 92 90 90 ALA ALA A . n A 1 93 GLU 93 91 91 GLU GLU A . n A 1 94 LEU 94 92 92 LEU LEU A . n A 1 95 GLU 95 93 93 GLU GLU A . n A 1 96 GLY 96 94 94 GLY GLY A . n A 1 97 ILE 97 95 95 ILE ILE A . n A 1 98 GLN 98 96 96 GLN GLN A . n A 1 99 TYR 99 97 97 TYR TYR A . n A 1 100 GLY 100 98 98 GLY GLY A . n A 1 101 ARG 101 99 99 ARG ARG A . n A 1 102 SER 102 100 100 SER SER A . n A 1 103 GLY 103 101 101 GLY GLY A . n A 1 104 GLU 104 102 102 GLU GLU A . n A 1 105 THR 105 103 103 THR THR A . n A 1 106 LEU 106 104 104 LEU LEU A . n A 1 107 GLY 107 105 105 GLY GLY A . n A 1 108 VAL 108 106 106 VAL VAL A . n A 1 109 LEU 109 107 107 LEU LEU A . n A 1 110 VAL 110 108 108 VAL VAL A . n A 1 111 PRO 111 109 109 PRO PRO A . n A 1 112 HIS 112 110 110 HIS HIS A . n A 1 113 VAL 113 111 111 VAL VAL A . n A 1 114 GLY 114 112 112 GLY GLY A . n A 1 115 GLU 115 113 113 GLU GLU A . n A 1 116 ILE 116 114 114 ILE ILE A . n A 1 117 PRO 117 115 115 PRO PRO A . n A 1 118 VAL 118 116 116 VAL VAL A . n A 1 119 ALA 119 117 117 ALA ALA A . n A 1 120 TYR 120 118 118 TYR TYR A . n A 1 121 ARG 121 119 119 ARG ARG A . n A 1 122 LYS 122 120 120 LYS LYS A . n A 1 123 VAL 123 121 121 VAL VAL A . n A 1 124 LEU 124 122 122 LEU LEU A . n A 1 125 LEU 125 123 123 LEU LEU A . n A 1 126 ARG 126 124 124 ARG ARG A . n A 1 127 LYS 127 125 125 LYS LYS A . n A 1 128 ASN 128 126 126 ASN ASN A . n A 1 129 GLY 129 127 127 GLY GLY A . n A 1 130 ASN 130 128 128 ASN ASN A . n A 1 131 LYS 131 129 129 LYS LYS A . n A 1 132 GLY 132 130 130 GLY GLY A . n A 1 133 ALA 133 131 131 ALA ALA A . n A 1 134 GLY 134 132 132 GLY GLY A . n A 1 135 GLY 135 133 133 GLY GLY A . n A 1 136 HIS 136 134 134 HIS HIS A . n A 1 137 SER 137 135 135 SER SER A . n A 1 138 TYR 138 136 136 TYR TYR A . n A 1 139 GLY 139 137 137 GLY GLY A . n A 1 140 ALA 140 138 138 ALA ALA A . n A 1 141 ASP 141 139 139 ASP ASP A . n A 1 142 LEU 142 140 140 LEU LEU A . n A 1 143 LYS 143 141 141 LYS LYS A . n A 1 144 SER 144 142 142 SER SER A . n A 1 145 PHE 145 143 143 PHE PHE A . n A 1 146 ASP 146 144 144 ASP ASP A . n A 1 147 LEU 147 145 145 LEU LEU A . n A 1 148 GLY 148 146 146 GLY GLY A . n A 1 149 ASP 149 147 147 ASP ASP A . n A 1 150 GLU 150 148 148 GLU GLU A . n A 1 151 LEU 151 149 149 LEU LEU A . n A 1 152 GLY 152 150 150 GLY GLY A . n A 1 153 THR 153 151 151 THR THR A . n A 1 154 ASP 154 152 152 ASP ASP A . n A 1 155 PRO 155 153 153 PRO PRO A . n A 1 156 TYR 156 154 154 TYR TYR A . n A 1 157 GLU 157 155 155 GLU GLU A . n A 1 158 ASP 158 156 156 ASP ASP A . n A 1 159 PHE 159 157 157 PHE PHE A . n A 1 160 GLN 160 158 158 GLN GLN A . n A 1 161 GLU 161 159 159 GLU GLU A . n A 1 162 ASN 162 160 160 ASN ASN A . n A 1 163 TRP 163 161 161 TRP TRP A . n A 1 164 ASN 164 162 162 ASN ASN A . n A 1 165 THR 165 163 163 THR THR A . n A 1 166 LYS 166 164 164 LYS LYS A . n A 1 167 HIS 167 165 165 HIS HIS A . n A 1 168 SER 168 166 166 SER SER A . n A 1 169 SER 169 167 167 SER SER A . n A 1 170 GLY 170 168 168 GLY GLY A . n A 1 171 VAL 171 169 169 VAL VAL A . n A 1 172 THR 172 170 170 THR THR A . n A 1 173 ARG 173 171 171 ARG ARG A . n A 1 174 GLU 174 172 172 GLU GLU A . n A 1 175 LEU 175 173 173 LEU LEU A . n A 1 176 MET 176 174 174 MET MET A . n A 1 177 ARG 177 175 175 ARG ARG A . n A 1 178 GLU 178 176 176 GLU GLU A . n A 1 179 LEU 179 177 177 LEU LEU A . n A 1 180 ASN 180 178 178 ASN ASN A . n A 1 181 GLY 181 179 179 GLY GLY A . n A 1 182 GLY 182 180 180 GLY GLY A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email t.carlomagno@bham.ac.uk _pdbx_contact_author.name_first Teresa _pdbx_contact_author.name_last Carlomagno _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-2437-2760 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-12-28 2 'Structure model' 1 1 2023-01-18 3 'Structure model' 1 2 2023-01-25 4 'Structure model' 1 3 2023-02-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' struct 4 4 'Structure model' citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_DOI' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' 4 2 'Structure model' '_citation_author.identifier_ORCID' 5 2 'Structure model' '_citation_author.name' 6 3 'Structure model' '_struct.title' 7 4 'Structure model' '_citation.journal_volume' 8 4 'Structure model' '_citation.page_first' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 Nsp1 600 ? uM '[U-13C; U-15N]' 1 'sodium phosphate' 50 ? mM 'natural abundance' 1 'sodium chloride' 200 ? mM 'natural abundance' 1 DTT 2 ? mM 'natural abundance' 1 EDTA 2 ? mM 'natural abundance' 1 'sodium azide' 0.01 ? '% w/v' 'natural abundance' 1 D2O 10 ? '% v/v' '[U-2H]' 2 Nsp1 500 ? uM '[U-10% 13C; U-100% 15N]' 2 'sodium phosphate' 50 ? mM 'natural abundance' 2 'sodium chloride' 200 ? mM 'natural abundance' 2 DTT 2 ? mM 'natural abundance' 2 EDTA 2 ? mM 'natural abundance' 2 'sodium azide' 0.01 ? '% w/v' 'natural abundance' 2 D2O 10 ? '% v/v' '[U-2H]' 3 Nsp1 500 ? uM '[U-10% 13C; U-100% 15N]' 3 'sodium phosphate' 50 ? mM 'natural abundance' 3 'sodium chloride' 200 ? mM 'natural abundance' 3 DTT 2 ? mM 'natural abundance' 3 EDTA 2 ? mM 'natural abundance' 3 'sodium azide' 0.01 ? '% w/w' 'natural abundance' 3 D2O 10 ? '% v/v' '[U-2H]' 3 'Pf1 phage' 12 ? mg/mL 'natural abundance' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 2 HZ3 A LYS 129 ? ? OD2 A ASP 144 ? ? 1.59 2 3 OE2 A GLU 36 ? ? HZ3 A LYS 129 ? ? 1.56 3 3 HH12 A ARG 77 ? ? OE1 A GLU 102 ? ? 1.60 4 4 HZ1 A LYS 72 ? ? OE2 A GLU 91 ? ? 1.56 5 4 HH12 A ARG 43 ? ? OD1 A ASP 147 ? ? 1.58 6 5 HZ2 A LYS 129 ? ? OD1 A ASP 147 ? ? 1.57 7 6 OE2 A GLU 36 ? ? HZ1 A LYS 129 ? ? 1.60 8 7 HZ2 A LYS 129 ? ? OD1 A ASP 144 ? ? 1.56 9 7 O A ASN 162 ? ? HG1 A THR 163 ? ? 1.58 10 8 OE2 A GLU 36 ? ? HZ3 A LYS 129 ? ? 1.54 11 8 HE2 A HIS 110 ? ? OE1 A GLU 113 ? ? 1.57 12 9 OE1 A GLU 36 ? ? HZ1 A LYS 129 ? ? 1.59 13 9 HZ2 A LYS 129 ? ? OE2 A GLU 176 ? ? 1.60 14 10 HZ3 A LYS 47 ? ? OD2 A ASP 48 ? ? 1.58 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 1 ? ? 78.53 -32.18 2 1 LEU A 4 ? ? 71.21 122.41 3 1 PRO A 6 ? ? -64.82 94.96 4 1 VAL A 28 ? ? 70.81 78.59 5 1 ARG A 29 ? ? -78.09 30.22 6 1 GLU A 55 ? ? -141.67 42.97 7 1 ARG A 77 ? ? -97.01 -151.44 8 1 THR A 78 ? ? 56.86 76.61 9 1 TYR A 97 ? ? -152.25 32.19 10 1 GLU A 113 ? ? 169.07 151.24 11 1 ASN A 128 ? ? 179.51 -165.04 12 1 LYS A 129 ? ? 80.83 144.99 13 1 ALA A 131 ? ? -84.90 47.57 14 1 TYR A 136 ? ? 59.08 13.26 15 1 ALA A 138 ? ? 54.90 72.52 16 1 LYS A 141 ? ? 60.06 70.49 17 1 ASP A 144 ? ? 55.78 80.16 18 1 LEU A 149 ? ? 53.65 85.66 19 1 THR A 151 ? ? -94.21 54.52 20 1 PRO A 153 ? ? -81.51 30.73 21 1 ASP A 156 ? ? 73.18 -33.02 22 1 GLU A 159 ? ? 60.28 62.14 23 1 HIS A 165 ? ? -113.50 79.91 24 1 SER A 166 ? ? -94.60 51.28 25 1 ARG A 171 ? ? -64.64 -70.57 26 1 GLU A 172 ? ? -160.08 -63.57 27 1 GLU A 176 ? ? 70.48 142.95 28 2 LEU A 4 ? ? 67.14 110.09 29 2 PRO A 6 ? ? -56.60 96.53 30 2 VAL A 28 ? ? 67.96 81.94 31 2 PHE A 31 ? ? -100.08 -62.42 32 2 GLU A 55 ? ? -144.26 38.90 33 2 PRO A 80 ? ? -69.15 81.12 34 2 HIS A 81 ? ? 57.44 -97.61 35 2 ILE A 95 ? ? -29.85 -47.20 36 2 GLN A 96 ? ? 68.37 96.67 37 2 TYR A 97 ? ? -98.81 48.34 38 2 GLU A 113 ? ? 170.53 150.83 39 2 ASP A 144 ? ? 52.09 80.10 40 2 LEU A 145 ? ? -102.05 57.21 41 2 ASP A 147 ? ? -166.86 89.08 42 2 LEU A 149 ? ? -114.37 75.27 43 2 GLU A 155 ? ? 36.35 76.58 44 2 THR A 170 ? ? 71.63 97.39 45 2 GLU A 172 ? ? -145.13 -83.08 46 2 LEU A 173 ? ? -83.66 38.06 47 2 LEU A 177 ? ? 70.42 -63.48 48 3 GLU A 2 ? ? -95.69 -62.69 49 3 LEU A 4 ? ? 174.52 135.02 50 3 VAL A 28 ? ? 70.42 76.33 51 3 ARG A 29 ? ? -78.26 30.08 52 3 GLU A 55 ? ? -142.19 41.53 53 3 ALA A 76 ? ? -74.64 -78.79 54 3 THR A 78 ? ? -50.05 103.88 55 3 HIS A 81 ? ? 69.83 -27.35 56 3 GLU A 113 ? ? 166.56 150.40 57 3 ALA A 138 ? ? -157.45 -153.78 58 3 PHE A 143 ? ? -90.39 -64.69 59 3 ASP A 144 ? ? 63.73 85.44 60 3 GLU A 148 ? ? -81.20 45.88 61 3 GLU A 155 ? ? 32.99 77.82 62 3 ASN A 162 ? ? -83.40 45.20 63 3 ARG A 171 ? ? -153.03 -36.88 64 3 GLU A 176 ? ? 64.75 106.68 65 3 LEU A 177 ? ? 72.04 -43.34 66 4 LEU A 4 ? ? 172.56 128.82 67 4 VAL A 28 ? ? 71.47 82.13 68 4 ARG A 29 ? ? -78.70 28.82 69 4 GLU A 55 ? ? -145.30 41.84 70 4 SER A 100 ? ? 76.82 -6.78 71 4 GLU A 113 ? ? 170.23 153.75 72 4 LYS A 129 ? ? 73.87 95.61 73 4 ASP A 139 ? ? -171.47 48.90 74 4 PHE A 143 ? ? -98.13 -93.51 75 4 ASP A 144 ? ? 50.96 86.46 76 4 PRO A 153 ? ? -74.69 32.98 77 4 GLU A 155 ? ? -151.41 63.36 78 4 PHE A 157 ? ? 47.20 -96.72 79 4 GLU A 159 ? ? -179.24 109.52 80 4 THR A 163 ? ? -78.50 48.80 81 4 LYS A 164 ? ? -160.56 -43.76 82 4 HIS A 165 ? ? 62.09 61.56 83 4 THR A 170 ? ? -57.63 105.08 84 4 LEU A 177 ? ? 64.87 -75.79 85 4 ASN A 178 ? ? -169.95 102.99 86 5 GLU A 2 ? ? -124.95 -160.21 87 5 LEU A 4 ? ? 65.96 96.51 88 5 PRO A 6 ? ? -59.39 91.04 89 5 VAL A 28 ? ? 67.94 74.07 90 5 ARG A 29 ? ? -78.86 28.09 91 5 GLU A 55 ? ? -140.43 40.02 92 5 ASP A 75 ? ? 58.80 -76.33 93 5 THR A 78 ? ? 34.46 76.24 94 5 PRO A 80 ? ? -60.77 -177.22 95 5 TYR A 97 ? ? -144.57 -39.34 96 5 GLU A 113 ? ? 167.20 135.88 97 5 ASN A 126 ? ? -178.50 149.85 98 5 ASN A 128 ? ? -172.64 106.92 99 5 HIS A 134 ? ? -83.72 -80.15 100 5 ASP A 139 ? ? 67.07 89.52 101 5 ASP A 144 ? ? 60.07 79.75 102 5 THR A 151 ? ? -81.93 43.94 103 5 GLU A 155 ? ? 26.59 58.57 104 5 THR A 163 ? ? 57.19 78.19 105 5 ARG A 171 ? ? -179.28 -25.01 106 5 GLU A 172 ? ? 69.77 -55.89 107 5 ARG A 175 ? ? 66.30 85.34 108 5 ASN A 178 ? ? -172.79 -50.40 109 6 LEU A 4 ? ? 73.36 133.46 110 6 PRO A 6 ? ? -50.89 100.65 111 6 PHE A 8 ? ? 68.69 127.70 112 6 VAL A 28 ? ? 68.85 83.96 113 6 GLU A 55 ? ? -148.81 37.94 114 6 PRO A 80 ? ? -65.89 72.17 115 6 HIS A 81 ? ? 59.12 -91.53 116 6 ARG A 99 ? ? 66.95 -56.71 117 6 SER A 100 ? ? 64.01 70.71 118 6 GLU A 113 ? ? 175.58 131.80 119 6 ALA A 131 ? ? -68.14 -74.06 120 6 SER A 135 ? ? -108.64 40.85 121 6 ALA A 138 ? ? -160.78 32.61 122 6 ASP A 139 ? ? -144.81 -149.83 123 6 LEU A 140 ? ? -121.61 -52.74 124 6 PHE A 143 ? ? -110.85 -117.42 125 6 ASP A 147 ? ? 62.26 99.37 126 6 GLU A 148 ? ? -96.71 57.34 127 6 TYR A 154 ? ? -148.23 30.93 128 6 GLU A 155 ? ? 25.32 72.26 129 6 ASP A 156 ? ? -93.52 -71.07 130 6 PHE A 157 ? ? -171.39 -11.77 131 6 VAL A 169 ? ? 66.28 89.33 132 6 GLU A 172 ? ? -62.35 -82.91 133 6 ARG A 175 ? ? -126.49 -168.75 134 6 LEU A 177 ? ? 50.71 17.53 135 7 MET A 1 ? ? -90.86 49.75 136 7 LEU A 4 ? ? 69.53 121.40 137 7 VAL A 28 ? ? 70.06 81.62 138 7 GLU A 55 ? ? -146.58 40.98 139 7 PRO A 80 ? ? -58.94 -174.65 140 7 TYR A 97 ? ? 44.54 26.22 141 7 ARG A 99 ? ? 70.13 89.68 142 7 HIS A 134 ? ? 59.59 78.59 143 7 ASP A 139 ? ? 67.02 85.35 144 7 SER A 142 ? ? -64.81 -178.24 145 7 PHE A 143 ? ? -78.31 -114.00 146 7 ASP A 144 ? ? 55.29 97.11 147 7 ASP A 147 ? ? 61.60 88.02 148 7 GLU A 148 ? ? -93.02 42.08 149 7 GLU A 155 ? ? 39.41 47.63 150 7 GLU A 159 ? ? -172.45 23.10 151 7 ASN A 162 ? ? -82.14 48.01 152 7 THR A 163 ? ? 60.08 126.28 153 7 LEU A 173 ? ? 37.18 53.18 154 7 ARG A 175 ? ? 70.06 137.68 155 7 LEU A 177 ? ? 71.51 -65.97 156 8 MET A 1 ? ? 60.21 60.16 157 8 SER A 3 ? ? 59.39 76.60 158 8 LEU A 4 ? ? 66.75 112.63 159 8 PRO A 6 ? ? -47.34 105.30 160 8 ASN A 9 ? ? -58.75 104.39 161 8 VAL A 28 ? ? 67.72 77.44 162 8 ARG A 29 ? ? -76.13 27.56 163 8 GLU A 55 ? ? -145.39 37.23 164 8 ARG A 77 ? ? -105.72 70.88 165 8 THR A 78 ? ? -159.16 70.49 166 8 HIS A 81 ? ? 175.79 -76.60 167 8 ALA A 131 ? ? -164.87 96.98 168 8 ALA A 138 ? ? -84.76 -94.05 169 8 ASP A 147 ? ? -179.55 122.17 170 8 THR A 151 ? ? -165.42 94.64 171 8 PRO A 153 ? ? -75.81 27.10 172 8 TYR A 154 ? ? -131.16 -43.42 173 8 GLU A 155 ? ? -90.70 47.71 174 8 GLU A 159 ? ? 55.17 94.30 175 8 SER A 166 ? ? 63.84 179.96 176 8 SER A 167 ? ? -154.58 60.23 177 8 ARG A 171 ? ? -169.35 27.78 178 8 MET A 174 ? ? -87.05 49.08 179 8 ASN A 178 ? ? -163.70 -50.36 180 9 GLU A 2 ? ? 61.03 -90.08 181 9 LEU A 4 ? ? -161.64 -159.50 182 9 PRO A 6 ? ? -67.37 85.35 183 9 VAL A 28 ? ? 70.73 80.91 184 9 THR A 78 ? ? -69.78 81.96 185 9 ALA A 79 ? ? -172.33 125.16 186 9 GLN A 96 ? ? 77.23 47.54 187 9 TYR A 97 ? ? -71.34 38.25 188 9 SER A 100 ? ? 60.52 78.12 189 9 GLU A 113 ? ? 167.10 156.60 190 9 ASP A 139 ? ? 53.65 84.75 191 9 SER A 142 ? ? 58.28 84.90 192 9 ASP A 144 ? ? -175.10 55.47 193 9 LEU A 145 ? ? -92.95 59.04 194 9 ASP A 147 ? ? 23.26 62.15 195 9 GLU A 155 ? ? -119.90 62.15 196 9 ASP A 156 ? ? 73.24 -43.20 197 9 GLU A 159 ? ? -92.01 59.58 198 9 TRP A 161 ? ? -81.25 -114.33 199 9 GLU A 172 ? ? -110.02 -81.07 200 9 LEU A 173 ? ? -78.41 34.24 201 9 GLU A 176 ? ? -92.63 -140.59 202 9 ASN A 178 ? ? -160.77 -166.11 203 10 LEU A 4 ? ? 72.09 116.12 204 10 VAL A 28 ? ? 72.34 81.04 205 10 PHE A 31 ? ? -94.90 -78.14 206 10 GLU A 55 ? ? -155.68 40.76 207 10 SER A 74 ? ? -57.12 102.05 208 10 THR A 78 ? ? 71.23 94.89 209 10 ALA A 79 ? ? -161.15 111.17 210 10 HIS A 81 ? ? 174.01 -81.75 211 10 GLU A 113 ? ? 169.93 161.26 212 10 ALA A 138 ? ? -79.32 37.87 213 10 ASP A 139 ? ? -165.23 34.45 214 10 PHE A 143 ? ? -143.23 -73.79 215 10 ASP A 144 ? ? 177.59 69.67 216 10 THR A 151 ? ? -143.23 55.45 217 10 PRO A 153 ? ? -78.36 33.65 218 10 TYR A 154 ? ? -123.76 -56.45 219 10 GLU A 155 ? ? -105.39 48.40 220 10 GLN A 158 ? ? 49.46 26.76 221 10 GLU A 159 ? ? -140.87 25.40 222 10 THR A 163 ? ? -157.18 -38.73 223 10 HIS A 165 ? ? -121.62 -53.63 224 10 LEU A 177 ? ? 72.93 150.96 225 10 ASN A 178 ? ? 64.38 -75.15 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 2 Y 1 A GLY -1 ? A GLY 1 3 3 Y 1 A GLY -1 ? A GLY 1 4 4 Y 1 A GLY -1 ? A GLY 1 5 5 Y 1 A GLY -1 ? A GLY 1 6 6 Y 1 A GLY -1 ? A GLY 1 7 7 Y 1 A GLY -1 ? A GLY 1 8 8 Y 1 A GLY -1 ? A GLY 1 9 9 Y 1 A GLY -1 ? A GLY 1 10 10 Y 1 A GLY -1 ? A GLY 1 # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR relaxation study' _pdbx_struct_assembly_auth_evidence.details ? #