data_8YGY # _entry.id 8YGY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8YGY pdb_00008ygy 10.2210/pdb8ygy/pdb WWPDB D_1300045609 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8YGY _pdbx_database_status.recvd_initial_deposition_date 2024-02-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email fwang@wuxibiortus.com _pdbx_contact_author.name_first Feng _pdbx_contact_author.name_last Wang _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-4384-5834 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Wang, F.' 1 ? 'Cheng, W.' 2 ? 'Lv, Z.' 3 ? 'Meng, Q.' 4 ? 'Xu, Y.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structure of the KLK1 from Biortus.' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, F.' 1 ? primary 'Cheng, W.' 2 ? primary 'Lv, Z.' 3 ? primary 'Meng, Q.' 4 ? primary 'Xu, Y.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Kallikrein-1 26429.541 1 3.4.21.35 ? ? ? 2 branched man 'alpha-L-fucopyranose-(1-3)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose' 513.490 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 3 ? ? ? ? 5 water nat water 18.015 98 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Kidney/pancreas/salivary gland kallikrein,Tissue kallikrein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;IVGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCISDNYQLWLGRHNLFDDENTAQFVHVSESFPHPGFNMS LLENHTRQADEDYSHDLMLLRLTEPADTITDAVKVVELPTEEPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDE CKKAHVQKVTDFMLCVGHLEGGKDTCVGDSGGPLMCDGVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTIAENS ; _entity_poly.pdbx_seq_one_letter_code_can ;IVGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCISDNYQLWLGRHNLFDDENTAQFVHVSESFPHPGFNMS LLENHTRQADEDYSHDLMLLRLTEPADTITDAVKVVELPTEEPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDE CKKAHVQKVTDFMLCVGHLEGGKDTCVGDSGGPLMCDGVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTIAENS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SULFATE ION' SO4 4 1,2-ETHANEDIOL EDO 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 VAL n 1 3 GLY n 1 4 GLY n 1 5 TRP n 1 6 GLU n 1 7 CYS n 1 8 GLU n 1 9 GLN n 1 10 HIS n 1 11 SER n 1 12 GLN n 1 13 PRO n 1 14 TRP n 1 15 GLN n 1 16 ALA n 1 17 ALA n 1 18 LEU n 1 19 TYR n 1 20 HIS n 1 21 PHE n 1 22 SER n 1 23 THR n 1 24 PHE n 1 25 GLN n 1 26 CYS n 1 27 GLY n 1 28 GLY n 1 29 ILE n 1 30 LEU n 1 31 VAL n 1 32 HIS n 1 33 ARG n 1 34 GLN n 1 35 TRP n 1 36 VAL n 1 37 LEU n 1 38 THR n 1 39 ALA n 1 40 ALA n 1 41 HIS n 1 42 CYS n 1 43 ILE n 1 44 SER n 1 45 ASP n 1 46 ASN n 1 47 TYR n 1 48 GLN n 1 49 LEU n 1 50 TRP n 1 51 LEU n 1 52 GLY n 1 53 ARG n 1 54 HIS n 1 55 ASN n 1 56 LEU n 1 57 PHE n 1 58 ASP n 1 59 ASP n 1 60 GLU n 1 61 ASN n 1 62 THR n 1 63 ALA n 1 64 GLN n 1 65 PHE n 1 66 VAL n 1 67 HIS n 1 68 VAL n 1 69 SER n 1 70 GLU n 1 71 SER n 1 72 PHE n 1 73 PRO n 1 74 HIS n 1 75 PRO n 1 76 GLY n 1 77 PHE n 1 78 ASN n 1 79 MET n 1 80 SER n 1 81 LEU n 1 82 LEU n 1 83 GLU n 1 84 ASN n 1 85 HIS n 1 86 THR n 1 87 ARG n 1 88 GLN n 1 89 ALA n 1 90 ASP n 1 91 GLU n 1 92 ASP n 1 93 TYR n 1 94 SER n 1 95 HIS n 1 96 ASP n 1 97 LEU n 1 98 MET n 1 99 LEU n 1 100 LEU n 1 101 ARG n 1 102 LEU n 1 103 THR n 1 104 GLU n 1 105 PRO n 1 106 ALA n 1 107 ASP n 1 108 THR n 1 109 ILE n 1 110 THR n 1 111 ASP n 1 112 ALA n 1 113 VAL n 1 114 LYS n 1 115 VAL n 1 116 VAL n 1 117 GLU n 1 118 LEU n 1 119 PRO n 1 120 THR n 1 121 GLU n 1 122 GLU n 1 123 PRO n 1 124 GLU n 1 125 VAL n 1 126 GLY n 1 127 SER n 1 128 THR n 1 129 CYS n 1 130 LEU n 1 131 ALA n 1 132 SER n 1 133 GLY n 1 134 TRP n 1 135 GLY n 1 136 SER n 1 137 ILE n 1 138 GLU n 1 139 PRO n 1 140 GLU n 1 141 ASN n 1 142 PHE n 1 143 SER n 1 144 PHE n 1 145 PRO n 1 146 ASP n 1 147 ASP n 1 148 LEU n 1 149 GLN n 1 150 CYS n 1 151 VAL n 1 152 ASP n 1 153 LEU n 1 154 LYS n 1 155 ILE n 1 156 LEU n 1 157 PRO n 1 158 ASN n 1 159 ASP n 1 160 GLU n 1 161 CYS n 1 162 LYS n 1 163 LYS n 1 164 ALA n 1 165 HIS n 1 166 VAL n 1 167 GLN n 1 168 LYS n 1 169 VAL n 1 170 THR n 1 171 ASP n 1 172 PHE n 1 173 MET n 1 174 LEU n 1 175 CYS n 1 176 VAL n 1 177 GLY n 1 178 HIS n 1 179 LEU n 1 180 GLU n 1 181 GLY n 1 182 GLY n 1 183 LYS n 1 184 ASP n 1 185 THR n 1 186 CYS n 1 187 VAL n 1 188 GLY n 1 189 ASP n 1 190 SER n 1 191 GLY n 1 192 GLY n 1 193 PRO n 1 194 LEU n 1 195 MET n 1 196 CYS n 1 197 ASP n 1 198 GLY n 1 199 VAL n 1 200 LEU n 1 201 GLN n 1 202 GLY n 1 203 VAL n 1 204 THR n 1 205 SER n 1 206 TRP n 1 207 GLY n 1 208 TYR n 1 209 VAL n 1 210 PRO n 1 211 CYS n 1 212 GLY n 1 213 THR n 1 214 PRO n 1 215 ASN n 1 216 LYS n 1 217 PRO n 1 218 SER n 1 219 VAL n 1 220 ALA n 1 221 VAL n 1 222 ARG n 1 223 VAL n 1 224 LEU n 1 225 SER n 1 226 TYR n 1 227 VAL n 1 228 LYS n 1 229 TRP n 1 230 ILE n 1 231 GLU n 1 232 ASP n 1 233 THR n 1 234 ILE n 1 235 ALA n 1 236 GLU n 1 237 ASN n 1 238 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 238 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene KLK1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'LFucpa1-3[LFucpa1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-2-2/a3-b1_a6-c1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(3+1)][a-L-Fucp]{}[(6+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 FUC C1 O1 1 NAG O3 HO3 sing ? 2 2 3 FUC C1 O1 1 NAG O6 HO6 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 25 25 ILE ILE A . n A 1 2 VAL 2 26 26 VAL VAL A . n A 1 3 GLY 3 27 27 GLY GLY A . n A 1 4 GLY 4 28 28 GLY GLY A . n A 1 5 TRP 5 29 29 TRP TRP A . n A 1 6 GLU 6 30 30 GLU GLU A . n A 1 7 CYS 7 31 31 CYS CYS A . n A 1 8 GLU 8 32 32 GLU GLU A . n A 1 9 GLN 9 33 33 GLN GLN A . n A 1 10 HIS 10 34 34 HIS HIS A . n A 1 11 SER 11 35 35 SER SER A . n A 1 12 GLN 12 36 36 GLN GLN A . n A 1 13 PRO 13 37 37 PRO PRO A . n A 1 14 TRP 14 38 38 TRP TRP A . n A 1 15 GLN 15 39 39 GLN GLN A . n A 1 16 ALA 16 40 40 ALA ALA A . n A 1 17 ALA 17 41 41 ALA ALA A . n A 1 18 LEU 18 42 42 LEU LEU A . n A 1 19 TYR 19 43 43 TYR TYR A . n A 1 20 HIS 20 44 44 HIS HIS A . n A 1 21 PHE 21 45 45 PHE PHE A . n A 1 22 SER 22 46 46 SER SER A . n A 1 23 THR 23 47 47 THR THR A . n A 1 24 PHE 24 48 48 PHE PHE A . n A 1 25 GLN 25 49 49 GLN GLN A . n A 1 26 CYS 26 50 50 CYS CYS A . n A 1 27 GLY 27 51 51 GLY GLY A . n A 1 28 GLY 28 52 52 GLY GLY A . n A 1 29 ILE 29 53 53 ILE ILE A . n A 1 30 LEU 30 54 54 LEU LEU A . n A 1 31 VAL 31 55 55 VAL VAL A . n A 1 32 HIS 32 56 56 HIS HIS A . n A 1 33 ARG 33 57 57 ARG ARG A . n A 1 34 GLN 34 58 58 GLN GLN A . n A 1 35 TRP 35 59 59 TRP TRP A . n A 1 36 VAL 36 60 60 VAL VAL A . n A 1 37 LEU 37 61 61 LEU LEU A . n A 1 38 THR 38 62 62 THR THR A . n A 1 39 ALA 39 63 63 ALA ALA A . n A 1 40 ALA 40 64 64 ALA ALA A . n A 1 41 HIS 41 65 65 HIS HIS A . n A 1 42 CYS 42 66 66 CYS CYS A . n A 1 43 ILE 43 67 67 ILE ILE A . n A 1 44 SER 44 68 68 SER SER A . n A 1 45 ASP 45 69 69 ASP ASP A . n A 1 46 ASN 46 70 70 ASN ASN A . n A 1 47 TYR 47 71 71 TYR TYR A . n A 1 48 GLN 48 72 72 GLN GLN A . n A 1 49 LEU 49 73 73 LEU LEU A . n A 1 50 TRP 50 74 74 TRP TRP A . n A 1 51 LEU 51 75 75 LEU LEU A . n A 1 52 GLY 52 76 76 GLY GLY A . n A 1 53 ARG 53 77 77 ARG ARG A . n A 1 54 HIS 54 78 78 HIS HIS A . n A 1 55 ASN 55 79 79 ASN ASN A . n A 1 56 LEU 56 80 80 LEU LEU A . n A 1 57 PHE 57 81 81 PHE PHE A . n A 1 58 ASP 58 82 82 ASP ASP A . n A 1 59 ASP 59 83 83 ASP ASP A . n A 1 60 GLU 60 84 84 GLU GLU A . n A 1 61 ASN 61 85 85 ASN ASN A . n A 1 62 THR 62 86 86 THR THR A . n A 1 63 ALA 63 87 87 ALA ALA A . n A 1 64 GLN 64 88 88 GLN GLN A . n A 1 65 PHE 65 89 89 PHE PHE A . n A 1 66 VAL 66 90 90 VAL VAL A . n A 1 67 HIS 67 91 91 HIS HIS A . n A 1 68 VAL 68 92 92 VAL VAL A . n A 1 69 SER 69 93 93 SER SER A . n A 1 70 GLU 70 94 94 GLU GLU A . n A 1 71 SER 71 95 95 SER SER A . n A 1 72 PHE 72 96 96 PHE PHE A . n A 1 73 PRO 73 97 97 PRO PRO A . n A 1 74 HIS 74 98 98 HIS HIS A . n A 1 75 PRO 75 99 99 PRO PRO A . n A 1 76 GLY 76 100 100 GLY GLY A . n A 1 77 PHE 77 101 101 PHE PHE A . n A 1 78 ASN 78 102 102 ASN ASN A . n A 1 79 MET 79 103 103 MET MET A . n A 1 80 SER 80 104 104 SER SER A . n A 1 81 LEU 81 105 105 LEU LEU A . n A 1 82 LEU 82 106 106 LEU LEU A . n A 1 83 GLU 83 107 107 GLU GLU A . n A 1 84 ASN 84 108 108 ASN ASN A . n A 1 85 HIS 85 109 109 HIS HIS A . n A 1 86 THR 86 110 110 THR THR A . n A 1 87 ARG 87 111 111 ARG ARG A . n A 1 88 GLN 88 112 112 GLN GLN A . n A 1 89 ALA 89 113 113 ALA ALA A . n A 1 90 ASP 90 114 114 ASP ASP A . n A 1 91 GLU 91 115 115 GLU GLU A . n A 1 92 ASP 92 116 116 ASP ASP A . n A 1 93 TYR 93 117 117 TYR TYR A . n A 1 94 SER 94 118 118 SER SER A . n A 1 95 HIS 95 119 119 HIS HIS A . n A 1 96 ASP 96 120 120 ASP ASP A . n A 1 97 LEU 97 121 121 LEU LEU A . n A 1 98 MET 98 122 122 MET MET A . n A 1 99 LEU 99 123 123 LEU LEU A . n A 1 100 LEU 100 124 124 LEU LEU A . n A 1 101 ARG 101 125 125 ARG ARG A . n A 1 102 LEU 102 126 126 LEU LEU A . n A 1 103 THR 103 127 127 THR THR A . n A 1 104 GLU 104 128 128 GLU GLU A . n A 1 105 PRO 105 129 129 PRO PRO A . n A 1 106 ALA 106 130 130 ALA ALA A . n A 1 107 ASP 107 131 131 ASP ASP A . n A 1 108 THR 108 132 132 THR THR A . n A 1 109 ILE 109 133 133 ILE ILE A . n A 1 110 THR 110 134 134 THR THR A . n A 1 111 ASP 111 135 135 ASP ASP A . n A 1 112 ALA 112 136 136 ALA ALA A . n A 1 113 VAL 113 137 137 VAL VAL A . n A 1 114 LYS 114 138 138 LYS LYS A . n A 1 115 VAL 115 139 139 VAL VAL A . n A 1 116 VAL 116 140 140 VAL VAL A . n A 1 117 GLU 117 141 141 GLU GLU A . n A 1 118 LEU 118 142 142 LEU LEU A . n A 1 119 PRO 119 143 143 PRO PRO A . n A 1 120 THR 120 144 144 THR THR A . n A 1 121 GLU 121 145 145 GLU GLU A . n A 1 122 GLU 122 146 146 GLU GLU A . n A 1 123 PRO 123 147 147 PRO PRO A . n A 1 124 GLU 124 148 148 GLU GLU A . n A 1 125 VAL 125 149 149 VAL VAL A . n A 1 126 GLY 126 150 150 GLY GLY A . n A 1 127 SER 127 151 151 SER SER A . n A 1 128 THR 128 152 152 THR THR A . n A 1 129 CYS 129 153 153 CYS CYS A . n A 1 130 LEU 130 154 154 LEU LEU A . n A 1 131 ALA 131 155 155 ALA ALA A . n A 1 132 SER 132 156 156 SER SER A . n A 1 133 GLY 133 157 157 GLY GLY A . n A 1 134 TRP 134 158 158 TRP TRP A . n A 1 135 GLY 135 159 159 GLY GLY A . n A 1 136 SER 136 160 160 SER SER A . n A 1 137 ILE 137 161 161 ILE ILE A . n A 1 138 GLU 138 162 162 GLU GLU A . n A 1 139 PRO 139 163 163 PRO PRO A . n A 1 140 GLU 140 164 164 GLU GLU A . n A 1 141 ASN 141 165 165 ASN ASN A . n A 1 142 PHE 142 166 166 PHE PHE A . n A 1 143 SER 143 167 167 SER SER A . n A 1 144 PHE 144 168 168 PHE PHE A . n A 1 145 PRO 145 169 169 PRO PRO A . n A 1 146 ASP 146 170 170 ASP ASP A . n A 1 147 ASP 147 171 171 ASP ASP A . n A 1 148 LEU 148 172 172 LEU LEU A . n A 1 149 GLN 149 173 173 GLN GLN A . n A 1 150 CYS 150 174 174 CYS CYS A . n A 1 151 VAL 151 175 175 VAL VAL A . n A 1 152 ASP 152 176 176 ASP ASP A . n A 1 153 LEU 153 177 177 LEU LEU A . n A 1 154 LYS 154 178 178 LYS LYS A . n A 1 155 ILE 155 179 179 ILE ILE A . n A 1 156 LEU 156 180 180 LEU LEU A . n A 1 157 PRO 157 181 181 PRO PRO A . n A 1 158 ASN 158 182 182 ASN ASN A . n A 1 159 ASP 159 183 183 ASP ASP A . n A 1 160 GLU 160 184 184 GLU GLU A . n A 1 161 CYS 161 185 185 CYS CYS A . n A 1 162 LYS 162 186 186 LYS LYS A . n A 1 163 LYS 163 187 187 LYS LYS A . n A 1 164 ALA 164 188 188 ALA ALA A . n A 1 165 HIS 165 189 189 HIS HIS A . n A 1 166 VAL 166 190 190 VAL VAL A . n A 1 167 GLN 167 191 191 GLN GLN A . n A 1 168 LYS 168 192 192 LYS LYS A . n A 1 169 VAL 169 193 193 VAL VAL A . n A 1 170 THR 170 194 194 THR THR A . n A 1 171 ASP 171 195 195 ASP ASP A . n A 1 172 PHE 172 196 196 PHE PHE A . n A 1 173 MET 173 197 197 MET MET A . n A 1 174 LEU 174 198 198 LEU LEU A . n A 1 175 CYS 175 199 199 CYS CYS A . n A 1 176 VAL 176 200 200 VAL VAL A . n A 1 177 GLY 177 201 201 GLY GLY A . n A 1 178 HIS 178 202 202 HIS HIS A . n A 1 179 LEU 179 203 203 LEU LEU A . n A 1 180 GLU 180 204 204 GLU GLU A . n A 1 181 GLY 181 205 205 GLY GLY A . n A 1 182 GLY 182 206 206 GLY GLY A . n A 1 183 LYS 183 207 207 LYS LYS A . n A 1 184 ASP 184 208 208 ASP ASP A . n A 1 185 THR 185 209 209 THR THR A . n A 1 186 CYS 186 210 210 CYS CYS A . n A 1 187 VAL 187 211 211 VAL VAL A . n A 1 188 GLY 188 212 212 GLY GLY A . n A 1 189 ASP 189 213 213 ASP ASP A . n A 1 190 SER 190 214 214 SER SER A . n A 1 191 GLY 191 215 215 GLY GLY A . n A 1 192 GLY 192 216 216 GLY GLY A . n A 1 193 PRO 193 217 217 PRO PRO A . n A 1 194 LEU 194 218 218 LEU LEU A . n A 1 195 MET 195 219 219 MET MET A . n A 1 196 CYS 196 220 220 CYS CYS A . n A 1 197 ASP 197 221 221 ASP ASP A . n A 1 198 GLY 198 222 222 GLY GLY A . n A 1 199 VAL 199 223 223 VAL VAL A . n A 1 200 LEU 200 224 224 LEU LEU A . n A 1 201 GLN 201 225 225 GLN GLN A . n A 1 202 GLY 202 226 226 GLY GLY A . n A 1 203 VAL 203 227 227 VAL VAL A . n A 1 204 THR 204 228 228 THR THR A . n A 1 205 SER 205 229 229 SER SER A . n A 1 206 TRP 206 230 230 TRP TRP A . n A 1 207 GLY 207 231 231 GLY GLY A . n A 1 208 TYR 208 232 232 TYR TYR A . n A 1 209 VAL 209 233 233 VAL VAL A . n A 1 210 PRO 210 234 234 PRO PRO A . n A 1 211 CYS 211 235 235 CYS CYS A . n A 1 212 GLY 212 236 236 GLY GLY A . n A 1 213 THR 213 237 237 THR THR A . n A 1 214 PRO 214 238 238 PRO PRO A . n A 1 215 ASN 215 239 239 ASN ASN A . n A 1 216 LYS 216 240 240 LYS LYS A . n A 1 217 PRO 217 241 241 PRO PRO A . n A 1 218 SER 218 242 242 SER SER A . n A 1 219 VAL 219 243 243 VAL VAL A . n A 1 220 ALA 220 244 244 ALA ALA A . n A 1 221 VAL 221 245 245 VAL VAL A . n A 1 222 ARG 222 246 246 ARG ARG A . n A 1 223 VAL 223 247 247 VAL VAL A . n A 1 224 LEU 224 248 248 LEU LEU A . n A 1 225 SER 225 249 249 SER SER A . n A 1 226 TYR 226 250 250 TYR TYR A . n A 1 227 VAL 227 251 251 VAL VAL A . n A 1 228 LYS 228 252 252 LYS LYS A . n A 1 229 TRP 229 253 253 TRP TRP A . n A 1 230 ILE 230 254 254 ILE ILE A . n A 1 231 GLU 231 255 255 GLU GLU A . n A 1 232 ASP 232 256 256 ASP ASP A . n A 1 233 THR 233 257 257 THR THR A . n A 1 234 ILE 234 258 258 ILE ILE A . n A 1 235 ALA 235 259 259 ALA ALA A . n A 1 236 GLU 236 260 260 GLU GLU A . n A 1 237 ASN 237 261 261 ASN ASN A . n A 1 238 SER 238 262 262 SER SER A . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 263 n B 2 FUC 2 B FUC 2 A FUC 267 n B 2 FUC 3 B FUC 3 A FUC 264 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 1 301 265 SO4 SO4 A . D 4 EDO 1 302 266 EDO EDO A . E 4 EDO 1 303 268 EDO EDO A . F 4 EDO 1 304 269 EDO EDO A . G 5 HOH 1 401 84 HOH HOH A . G 5 HOH 2 402 77 HOH HOH A . G 5 HOH 3 403 66 HOH HOH A . G 5 HOH 4 404 74 HOH HOH A . G 5 HOH 5 405 65 HOH HOH A . G 5 HOH 6 406 82 HOH HOH A . G 5 HOH 7 407 71 HOH HOH A . G 5 HOH 8 408 49 HOH HOH A . G 5 HOH 9 409 41 HOH HOH A . G 5 HOH 10 410 95 HOH HOH A . G 5 HOH 11 411 54 HOH HOH A . G 5 HOH 12 412 34 HOH HOH A . G 5 HOH 13 413 28 HOH HOH A . G 5 HOH 14 414 12 HOH HOH A . G 5 HOH 15 415 55 HOH HOH A . G 5 HOH 16 416 73 HOH HOH A . G 5 HOH 17 417 80 HOH HOH A . G 5 HOH 18 418 24 HOH HOH A . G 5 HOH 19 419 32 HOH HOH A . G 5 HOH 20 420 68 HOH HOH A . G 5 HOH 21 421 97 HOH HOH A . G 5 HOH 22 422 48 HOH HOH A . G 5 HOH 23 423 81 HOH HOH A . G 5 HOH 24 424 19 HOH HOH A . G 5 HOH 25 425 57 HOH HOH A . G 5 HOH 26 426 69 HOH HOH A . G 5 HOH 27 427 78 HOH HOH A . G 5 HOH 28 428 23 HOH HOH A . G 5 HOH 29 429 8 HOH HOH A . G 5 HOH 30 430 13 HOH HOH A . G 5 HOH 31 431 70 HOH HOH A . G 5 HOH 32 432 67 HOH HOH A . G 5 HOH 33 433 25 HOH HOH A . G 5 HOH 34 434 51 HOH HOH A . G 5 HOH 35 435 61 HOH HOH A . G 5 HOH 36 436 86 HOH HOH A . G 5 HOH 37 437 96 HOH HOH A . G 5 HOH 38 438 47 HOH HOH A . G 5 HOH 39 439 62 HOH HOH A . G 5 HOH 40 440 21 HOH HOH A . G 5 HOH 41 441 9 HOH HOH A . G 5 HOH 42 442 60 HOH HOH A . G 5 HOH 43 443 39 HOH HOH A . G 5 HOH 44 444 50 HOH HOH A . G 5 HOH 45 445 56 HOH HOH A . G 5 HOH 46 446 31 HOH HOH A . G 5 HOH 47 447 30 HOH HOH A . G 5 HOH 48 448 79 HOH HOH A . G 5 HOH 49 449 93 HOH HOH A . G 5 HOH 50 450 20 HOH HOH A . G 5 HOH 51 451 75 HOH HOH A . G 5 HOH 52 452 83 HOH HOH A . G 5 HOH 53 453 45 HOH HOH A . G 5 HOH 54 454 26 HOH HOH A . G 5 HOH 55 455 5 HOH HOH A . G 5 HOH 56 456 63 HOH HOH A . G 5 HOH 57 457 52 HOH HOH A . G 5 HOH 58 458 40 HOH HOH A . G 5 HOH 59 459 94 HOH HOH A . G 5 HOH 60 460 76 HOH HOH A . G 5 HOH 61 461 10 HOH HOH A . G 5 HOH 62 462 42 HOH HOH A . G 5 HOH 63 463 33 HOH HOH A . G 5 HOH 64 464 88 HOH HOH A . G 5 HOH 65 465 46 HOH HOH A . G 5 HOH 66 466 4 HOH HOH A . G 5 HOH 67 467 17 HOH HOH A . G 5 HOH 68 468 6 HOH HOH A . G 5 HOH 69 469 14 HOH HOH A . G 5 HOH 70 470 37 HOH HOH A . G 5 HOH 71 471 11 HOH HOH A . G 5 HOH 72 472 3 HOH HOH A . G 5 HOH 73 473 27 HOH HOH A . G 5 HOH 74 474 91 HOH HOH A . G 5 HOH 75 475 1 HOH HOH A . G 5 HOH 76 476 64 HOH HOH A . G 5 HOH 77 477 87 HOH HOH A . G 5 HOH 78 478 2 HOH HOH A . G 5 HOH 79 479 35 HOH HOH A . G 5 HOH 80 480 29 HOH HOH A . G 5 HOH 81 481 38 HOH HOH A . G 5 HOH 82 482 98 HOH HOH A . G 5 HOH 83 483 36 HOH HOH A . G 5 HOH 84 484 90 HOH HOH A . G 5 HOH 85 485 85 HOH HOH A . G 5 HOH 86 486 7 HOH HOH A . G 5 HOH 87 487 58 HOH HOH A . G 5 HOH 88 488 59 HOH HOH A . G 5 HOH 89 489 72 HOH HOH A . G 5 HOH 90 490 44 HOH HOH A . G 5 HOH 91 491 16 HOH HOH A . G 5 HOH 92 492 18 HOH HOH A . G 5 HOH 93 493 15 HOH HOH A . G 5 HOH 94 494 53 HOH HOH A . G 5 HOH 95 495 43 HOH HOH A . G 5 HOH 96 496 22 HOH HOH A . G 5 HOH 97 497 89 HOH HOH A . G 5 HOH 98 498 92 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0419 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8YGY _cell.details ? _cell.formula_units_Z ? _cell.length_a 45.708 _cell.length_a_esd ? _cell.length_b 68.590 _cell.length_b_esd ? _cell.length_c 80.458 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8YGY _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8YGY _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.39 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.45 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2M (NH4)2SO4, 0.1M Bis-Tris pH6.5, 25% PEG3,350.' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-02-25 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.180820 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'CLSI BEAMLINE 08ID-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.180820 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 08ID-1 _diffrn_source.pdbx_synchrotron_site CLSI # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8YGY _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.40 _reflns.d_resolution_low 45.750 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 9127 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 88.1 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.6 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.167 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.40 _reflns_shell.d_res_low 2.49 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 513 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.981 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] -2.543 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] -0.000 _refine.aniso_B[2][2] -1.631 _refine.aniso_B[2][3] 0.000 _refine.aniso_B[3][3] 4.173 _refine.B_iso_max ? _refine.B_iso_mean 32.974 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.953 _refine.correlation_coeff_Fo_to_Fc_free 0.905 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8YGY _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.401 _refine.ls_d_res_low 45.750 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 9103 _refine.ls_number_reflns_R_free 439 _refine.ls_number_reflns_R_work 8664 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 87.782 _refine.ls_percent_reflns_R_free 4.823 _refine.ls_R_factor_all 0.183 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2451 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1803 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.808 _refine.pdbx_overall_ESU_R_Free 0.301 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 10.330 _refine.overall_SU_ML 0.223 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1855 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 51 _refine_hist.number_atoms_solvent 98 _refine_hist.number_atoms_total 2004 _refine_hist.d_res_high 2.401 _refine_hist.d_res_low 45.750 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.002 0.012 1961 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.016 1734 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 0.996 1.807 2680 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.353 1.742 4022 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.489 5.000 237 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 4.742 5.000 5 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 11.159 10.000 294 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 10.641 10.000 91 ? r_dihedral_angle_6_deg ? ? 'X-RAY DIFFRACTION' ? 0.045 0.200 300 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 2277 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 419 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.174 0.200 360 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.189 0.200 1659 ? r_symmetry_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.170 0.200 933 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.089 0.200 979 ? r_symmetry_nbtor_other ? ? 'X-RAY DIFFRACTION' ? 0.132 0.200 85 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.088 0.200 5 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.153 0.200 37 ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.092 0.200 5 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 1.315 3.382 951 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.311 3.381 951 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.294 6.076 1187 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 2.295 6.078 1188 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 1.538 3.695 1010 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 1.537 3.697 1011 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 2.698 6.695 1493 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 2.697 6.696 1494 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 4.440 33.991 2100 ? r_lrange_it ? ? 'X-RAY DIFFRACTION' ? 4.434 34.017 2094 ? r_lrange_other ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.401 2.463 732 . 16 329 47.1311 . 0.282 . . 0.284 . . . . . 0.258 . 20 . 0.928 0.944 0.238 'X-RAY DIFFRACTION' 2.463 2.530 737 . 14 379 53.3243 . 0.283 . . 0.283 . . . . . 0.253 . 20 . 0.936 0.921 0.303 'X-RAY DIFFRACTION' 2.530 2.603 697 . 21 420 63.2712 . 0.252 . . 0.251 . . . . . 0.214 . 20 . 0.948 0.938 0.274 'X-RAY DIFFRACTION' 2.603 2.683 704 . 21 494 73.1534 . 0.260 . . 0.256 . . . . . 0.217 . 20 . 0.938 0.933 0.339 'X-RAY DIFFRACTION' 2.683 2.771 662 . 36 560 90.0302 . 0.244 . . 0.237 . . . . . 0.192 . 20 . 0.958 0.935 0.335 'X-RAY DIFFRACTION' 2.771 2.868 665 . 41 609 97.7444 . 0.221 . . 0.221 . . . . . 0.187 . 20 . 0.965 0.963 0.221 'X-RAY DIFFRACTION' 2.868 2.975 620 . 27 593 100.0000 . 0.177 . . 0.172 . . . . . 0.140 . 20 . 0.979 0.947 0.272 'X-RAY DIFFRACTION' 2.975 3.096 609 . 26 582 99.8358 . 0.195 . . 0.195 . . . . . 0.166 . 20 . 0.976 0.972 0.215 'X-RAY DIFFRACTION' 3.096 3.233 585 . 23 560 99.6581 . 0.181 . . 0.178 . . . . . 0.149 . 20 . 0.977 0.939 0.268 'X-RAY DIFFRACTION' 3.233 3.390 553 . 32 521 100.0000 . 0.174 . . 0.172 . . . . . 0.150 . 20 . 0.981 0.964 0.217 'X-RAY DIFFRACTION' 3.390 3.573 544 . 30 514 100.0000 . 0.165 . . 0.162 . . . . . 0.141 . 20 . 0.983 0.962 0.236 'X-RAY DIFFRACTION' 3.573 3.788 502 . 22 480 100.0000 . 0.168 . . 0.163 . . . . . 0.144 . 20 . 0.983 0.960 0.268 'X-RAY DIFFRACTION' 3.788 4.048 483 . 17 466 100.0000 . 0.150 . . 0.150 . . . . . 0.133 . 20 . 0.986 0.986 0.158 'X-RAY DIFFRACTION' 4.048 4.369 441 . 17 424 100.0000 . 0.133 . . 0.132 . . . . . 0.121 . 20 . 0.990 0.985 0.156 'X-RAY DIFFRACTION' 4.369 4.782 419 . 21 394 99.0453 . 0.151 . . 0.149 . . . . . 0.136 . 20 . 0.986 0.971 0.203 'X-RAY DIFFRACTION' 4.782 5.339 379 . 25 354 100.0000 . 0.137 . . 0.130 . . . . . 0.118 . 20 . 0.989 0.972 0.247 'X-RAY DIFFRACTION' 5.339 6.151 344 . 15 329 100.0000 . 0.189 . . 0.188 . . . . . 0.161 . 20 . 0.978 0.973 0.220 'X-RAY DIFFRACTION' 6.151 7.499 302 . 20 281 99.6689 . 0.208 . . 0.201 . . . . . 0.178 . 20 . 0.978 0.944 0.312 'X-RAY DIFFRACTION' 7.499 10.466 235 . 8 227 100.0000 . 0.183 . . 0.178 . . . . . 0.164 . 20 . 0.980 0.962 0.373 'X-RAY DIFFRACTION' 10.466 45.750 156 . 7 148 99.3590 . 0.285 . . 0.283 . . . . . 0.267 . 20 . 0.949 0.979 0.321 # _struct.entry_id 8YGY _struct.title 'Structure of the KLK1 from Biortus.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8YGY _struct_keywords.text 'Hydrolase, Protease, Serine protease' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code KLK1_HUMAN _struct_ref.pdbx_db_accession P06870 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;IVGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCISDNYQLWLGRHNLFDDENTAQFVHVSESFPHPGFNMS LLENHTRQADEDYSHDLMLLRLTEPADTITDAVKVVELPTEEPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDE CKKAHVQKVTDFMLCVGHLEGGKDTCVGDSGGPLMCDGVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTIAENS ; _struct_ref.pdbx_align_begin 25 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8YGY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 238 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P06870 _struct_ref_seq.db_align_beg 25 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 262 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 25 _struct_ref_seq.pdbx_auth_seq_align_end 262 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 920 ? 1 MORE -1 ? 1 'SSA (A^2)' 11000 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 39 ? ILE A 43 ? ALA A 63 ILE A 67 5 ? 5 HELX_P HELX_P2 AA2 ASN A 78 ? GLU A 83 ? ASN A 102 GLU A 107 5 ? 6 HELX_P HELX_P3 AA3 PRO A 157 ? HIS A 165 ? PRO A 181 HIS A 189 1 ? 9 HELX_P HELX_P4 AA4 TYR A 226 ? ASN A 237 ? TYR A 250 ASN A 261 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 7 SG ? ? ? 1_555 A CYS 150 SG ? ? A CYS 31 A CYS 174 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf2 disulf ? ? A CYS 26 SG ? ? ? 1_555 A CYS 42 SG ? ? A CYS 50 A CYS 66 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf3 disulf ? ? A CYS 129 SG ? ? ? 1_555 A CYS 196 SG ? ? A CYS 153 A CYS 220 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf4 disulf ? ? A CYS 161 SG ? ? ? 1_555 A CYS 175 SG ? ? A CYS 185 A CYS 199 1_555 ? ? ? ? ? ? ? 2.059 ? ? disulf5 disulf ? ? A CYS 186 SG ? ? ? 1_555 A CYS 211 SG ? ? A CYS 210 A CYS 235 1_555 ? ? ? ? ? ? ? 2.054 ? ? covale1 covale one ? A ASN 78 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 102 B NAG 1 1_555 ? ? ? ? ? ? ? 1.454 ? N-Glycosylation covale2 covale both ? B NAG . O3 ? ? ? 1_555 B FUC . C1 ? ? B NAG 1 B FUC 2 1_555 ? ? ? ? ? ? ? 1.395 ? ? covale3 covale both ? B NAG . O6 ? ? ? 1_555 B FUC . C1 ? ? B NAG 1 B FUC 3 1_555 ? ? ? ? ? ? ? 1.403 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id VAL _struct_mon_prot_cis.label_seq_id 209 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id VAL _struct_mon_prot_cis.auth_seq_id 233 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 210 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 234 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 7.27 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TRP A 5 ? GLU A 6 ? TRP A 29 GLU A 30 AA1 2 GLN A 149 ? LEU A 156 ? GLN A 173 LEU A 180 AA1 3 MET A 173 ? GLY A 177 ? MET A 197 GLY A 201 AA1 4 SER A 218 ? ARG A 222 ? SER A 242 ARG A 246 AA1 5 VAL A 199 ? THR A 204 ? VAL A 223 THR A 228 AA1 6 PRO A 193 ? CYS A 196 ? PRO A 217 CYS A 220 AA1 7 THR A 128 ? GLY A 133 ? THR A 152 GLY A 157 AA1 8 GLN A 149 ? LEU A 156 ? GLN A 173 LEU A 180 AA2 1 GLN A 64 ? VAL A 66 ? GLN A 88 VAL A 90 AA2 2 GLN A 48 ? LEU A 51 ? GLN A 72 LEU A 75 AA2 3 GLN A 15 ? HIS A 20 ? GLN A 39 HIS A 44 AA2 4 THR A 23 ? HIS A 32 ? THR A 47 HIS A 56 AA2 5 TRP A 35 ? THR A 38 ? TRP A 59 THR A 62 AA2 6 MET A 98 ? LEU A 102 ? MET A 122 LEU A 126 AA2 7 VAL A 68 ? PRO A 73 ? VAL A 92 PRO A 97 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TRP A 5 ? N TRP A 29 O CYS A 150 ? O CYS A 174 AA1 2 3 N LEU A 156 ? N LEU A 180 O CYS A 175 ? O CYS A 199 AA1 3 4 N VAL A 176 ? N VAL A 200 O SER A 218 ? O SER A 242 AA1 4 5 O VAL A 221 ? O VAL A 245 N VAL A 203 ? N VAL A 227 AA1 5 6 O GLN A 201 ? O GLN A 225 N LEU A 194 ? N LEU A 218 AA1 6 7 O MET A 195 ? O MET A 219 N LEU A 130 ? N LEU A 154 AA1 7 8 N CYS A 129 ? N CYS A 153 O LEU A 153 ? O LEU A 177 AA2 1 2 O GLN A 64 ? O GLN A 88 N LEU A 51 ? N LEU A 75 AA2 2 3 O GLN A 48 ? O GLN A 72 N TYR A 19 ? N TYR A 43 AA2 3 4 N LEU A 18 ? N LEU A 42 O CYS A 26 ? O CYS A 50 AA2 4 5 N ILE A 29 ? N ILE A 53 O LEU A 37 ? O LEU A 61 AA2 5 6 N THR A 38 ? N THR A 62 O MET A 98 ? O MET A 122 AA2 6 7 O LEU A 99 ? O LEU A 123 N PHE A 72 ? N PHE A 96 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 46 ? ? 82.20 -6.96 2 1 GLN A 49 ? ? -128.02 -52.27 3 1 HIS A 78 ? ? -134.33 -58.07 4 1 TYR A 117 ? ? -98.74 34.66 5 1 GLU A 164 ? ? -120.10 -56.76 # _pdbx_entry_details.entry_id 8YGY _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 FUC C1 C N R 98 FUC C2 C N S 99 FUC C3 C N R 100 FUC C4 C N S 101 FUC C5 C N S 102 FUC C6 C N N 103 FUC O1 O N N 104 FUC O2 O N N 105 FUC O3 O N N 106 FUC O4 O N N 107 FUC O5 O N N 108 FUC H1 H N N 109 FUC H2 H N N 110 FUC H3 H N N 111 FUC H4 H N N 112 FUC H5 H N N 113 FUC H61 H N N 114 FUC H62 H N N 115 FUC H63 H N N 116 FUC HO1 H N N 117 FUC HO2 H N N 118 FUC HO3 H N N 119 FUC HO4 H N N 120 GLN N N N N 121 GLN CA C N S 122 GLN C C N N 123 GLN O O N N 124 GLN CB C N N 125 GLN CG C N N 126 GLN CD C N N 127 GLN OE1 O N N 128 GLN NE2 N N N 129 GLN OXT O N N 130 GLN H H N N 131 GLN H2 H N N 132 GLN HA H N N 133 GLN HB2 H N N 134 GLN HB3 H N N 135 GLN HG2 H N N 136 GLN HG3 H N N 137 GLN HE21 H N N 138 GLN HE22 H N N 139 GLN HXT H N N 140 GLU N N N N 141 GLU CA C N S 142 GLU C C N N 143 GLU O O N N 144 GLU CB C N N 145 GLU CG C N N 146 GLU CD C N N 147 GLU OE1 O N N 148 GLU OE2 O N N 149 GLU OXT O N N 150 GLU H H N N 151 GLU H2 H N N 152 GLU HA H N N 153 GLU HB2 H N N 154 GLU HB3 H N N 155 GLU HG2 H N N 156 GLU HG3 H N N 157 GLU HE2 H N N 158 GLU HXT H N N 159 GLY N N N N 160 GLY CA C N N 161 GLY C C N N 162 GLY O O N N 163 GLY OXT O N N 164 GLY H H N N 165 GLY H2 H N N 166 GLY HA2 H N N 167 GLY HA3 H N N 168 GLY HXT H N N 169 HIS N N N N 170 HIS CA C N S 171 HIS C C N N 172 HIS O O N N 173 HIS CB C N N 174 HIS CG C Y N 175 HIS ND1 N Y N 176 HIS CD2 C Y N 177 HIS CE1 C Y N 178 HIS NE2 N Y N 179 HIS OXT O N N 180 HIS H H N N 181 HIS H2 H N N 182 HIS HA H N N 183 HIS HB2 H N N 184 HIS HB3 H N N 185 HIS HD1 H N N 186 HIS HD2 H N N 187 HIS HE1 H N N 188 HIS HE2 H N N 189 HIS HXT H N N 190 HOH O O N N 191 HOH H1 H N N 192 HOH H2 H N N 193 ILE N N N N 194 ILE CA C N S 195 ILE C C N N 196 ILE O O N N 197 ILE CB C N S 198 ILE CG1 C N N 199 ILE CG2 C N N 200 ILE CD1 C N N 201 ILE OXT O N N 202 ILE H H N N 203 ILE H2 H N N 204 ILE HA H N N 205 ILE HB H N N 206 ILE HG12 H N N 207 ILE HG13 H N N 208 ILE HG21 H N N 209 ILE HG22 H N N 210 ILE HG23 H N N 211 ILE HD11 H N N 212 ILE HD12 H N N 213 ILE HD13 H N N 214 ILE HXT H N N 215 LEU N N N N 216 LEU CA C N S 217 LEU C C N N 218 LEU O O N N 219 LEU CB C N N 220 LEU CG C N N 221 LEU CD1 C N N 222 LEU CD2 C N N 223 LEU OXT O N N 224 LEU H H N N 225 LEU H2 H N N 226 LEU HA H N N 227 LEU HB2 H N N 228 LEU HB3 H N N 229 LEU HG H N N 230 LEU HD11 H N N 231 LEU HD12 H N N 232 LEU HD13 H N N 233 LEU HD21 H N N 234 LEU HD22 H N N 235 LEU HD23 H N N 236 LEU HXT H N N 237 LYS N N N N 238 LYS CA C N S 239 LYS C C N N 240 LYS O O N N 241 LYS CB C N N 242 LYS CG C N N 243 LYS CD C N N 244 LYS CE C N N 245 LYS NZ N N N 246 LYS OXT O N N 247 LYS H H N N 248 LYS H2 H N N 249 LYS HA H N N 250 LYS HB2 H N N 251 LYS HB3 H N N 252 LYS HG2 H N N 253 LYS HG3 H N N 254 LYS HD2 H N N 255 LYS HD3 H N N 256 LYS HE2 H N N 257 LYS HE3 H N N 258 LYS HZ1 H N N 259 LYS HZ2 H N N 260 LYS HZ3 H N N 261 LYS HXT H N N 262 MET N N N N 263 MET CA C N S 264 MET C C N N 265 MET O O N N 266 MET CB C N N 267 MET CG C N N 268 MET SD S N N 269 MET CE C N N 270 MET OXT O N N 271 MET H H N N 272 MET H2 H N N 273 MET HA H N N 274 MET HB2 H N N 275 MET HB3 H N N 276 MET HG2 H N N 277 MET HG3 H N N 278 MET HE1 H N N 279 MET HE2 H N N 280 MET HE3 H N N 281 MET HXT H N N 282 NAG C1 C N R 283 NAG C2 C N R 284 NAG C3 C N R 285 NAG C4 C N S 286 NAG C5 C N R 287 NAG C6 C N N 288 NAG C7 C N N 289 NAG C8 C N N 290 NAG N2 N N N 291 NAG O1 O N N 292 NAG O3 O N N 293 NAG O4 O N N 294 NAG O5 O N N 295 NAG O6 O N N 296 NAG O7 O N N 297 NAG H1 H N N 298 NAG H2 H N N 299 NAG H3 H N N 300 NAG H4 H N N 301 NAG H5 H N N 302 NAG H61 H N N 303 NAG H62 H N N 304 NAG H81 H N N 305 NAG H82 H N N 306 NAG H83 H N N 307 NAG HN2 H N N 308 NAG HO1 H N N 309 NAG HO3 H N N 310 NAG HO4 H N N 311 NAG HO6 H N N 312 PHE N N N N 313 PHE CA C N S 314 PHE C C N N 315 PHE O O N N 316 PHE CB C N N 317 PHE CG C Y N 318 PHE CD1 C Y N 319 PHE CD2 C Y N 320 PHE CE1 C Y N 321 PHE CE2 C Y N 322 PHE CZ C Y N 323 PHE OXT O N N 324 PHE H H N N 325 PHE H2 H N N 326 PHE HA H N N 327 PHE HB2 H N N 328 PHE HB3 H N N 329 PHE HD1 H N N 330 PHE HD2 H N N 331 PHE HE1 H N N 332 PHE HE2 H N N 333 PHE HZ H N N 334 PHE HXT H N N 335 PRO N N N N 336 PRO CA C N S 337 PRO C C N N 338 PRO O O N N 339 PRO CB C N N 340 PRO CG C N N 341 PRO CD C N N 342 PRO OXT O N N 343 PRO H H N N 344 PRO HA H N N 345 PRO HB2 H N N 346 PRO HB3 H N N 347 PRO HG2 H N N 348 PRO HG3 H N N 349 PRO HD2 H N N 350 PRO HD3 H N N 351 PRO HXT H N N 352 SER N N N N 353 SER CA C N S 354 SER C C N N 355 SER O O N N 356 SER CB C N N 357 SER OG O N N 358 SER OXT O N N 359 SER H H N N 360 SER H2 H N N 361 SER HA H N N 362 SER HB2 H N N 363 SER HB3 H N N 364 SER HG H N N 365 SER HXT H N N 366 SO4 S S N N 367 SO4 O1 O N N 368 SO4 O2 O N N 369 SO4 O3 O N N 370 SO4 O4 O N N 371 THR N N N N 372 THR CA C N S 373 THR C C N N 374 THR O O N N 375 THR CB C N R 376 THR OG1 O N N 377 THR CG2 C N N 378 THR OXT O N N 379 THR H H N N 380 THR H2 H N N 381 THR HA H N N 382 THR HB H N N 383 THR HG1 H N N 384 THR HG21 H N N 385 THR HG22 H N N 386 THR HG23 H N N 387 THR HXT H N N 388 TRP N N N N 389 TRP CA C N S 390 TRP C C N N 391 TRP O O N N 392 TRP CB C N N 393 TRP CG C Y N 394 TRP CD1 C Y N 395 TRP CD2 C Y N 396 TRP NE1 N Y N 397 TRP CE2 C Y N 398 TRP CE3 C Y N 399 TRP CZ2 C Y N 400 TRP CZ3 C Y N 401 TRP CH2 C Y N 402 TRP OXT O N N 403 TRP H H N N 404 TRP H2 H N N 405 TRP HA H N N 406 TRP HB2 H N N 407 TRP HB3 H N N 408 TRP HD1 H N N 409 TRP HE1 H N N 410 TRP HE3 H N N 411 TRP HZ2 H N N 412 TRP HZ3 H N N 413 TRP HH2 H N N 414 TRP HXT H N N 415 TYR N N N N 416 TYR CA C N S 417 TYR C C N N 418 TYR O O N N 419 TYR CB C N N 420 TYR CG C Y N 421 TYR CD1 C Y N 422 TYR CD2 C Y N 423 TYR CE1 C Y N 424 TYR CE2 C Y N 425 TYR CZ C Y N 426 TYR OH O N N 427 TYR OXT O N N 428 TYR H H N N 429 TYR H2 H N N 430 TYR HA H N N 431 TYR HB2 H N N 432 TYR HB3 H N N 433 TYR HD1 H N N 434 TYR HD2 H N N 435 TYR HE1 H N N 436 TYR HE2 H N N 437 TYR HH H N N 438 TYR HXT H N N 439 VAL N N N N 440 VAL CA C N S 441 VAL C C N N 442 VAL O O N N 443 VAL CB C N N 444 VAL CG1 C N N 445 VAL CG2 C N N 446 VAL OXT O N N 447 VAL H H N N 448 VAL H2 H N N 449 VAL HA H N N 450 VAL HB H N N 451 VAL HG11 H N N 452 VAL HG12 H N N 453 VAL HG13 H N N 454 VAL HG21 H N N 455 VAL HG22 H N N 456 VAL HG23 H N N 457 VAL HXT H N N 458 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 FUC C1 C2 sing N N 92 FUC C1 O1 sing N N 93 FUC C1 O5 sing N N 94 FUC C1 H1 sing N N 95 FUC C2 C3 sing N N 96 FUC C2 O2 sing N N 97 FUC C2 H2 sing N N 98 FUC C3 C4 sing N N 99 FUC C3 O3 sing N N 100 FUC C3 H3 sing N N 101 FUC C4 C5 sing N N 102 FUC C4 O4 sing N N 103 FUC C4 H4 sing N N 104 FUC C5 C6 sing N N 105 FUC C5 O5 sing N N 106 FUC C5 H5 sing N N 107 FUC C6 H61 sing N N 108 FUC C6 H62 sing N N 109 FUC C6 H63 sing N N 110 FUC O1 HO1 sing N N 111 FUC O2 HO2 sing N N 112 FUC O3 HO3 sing N N 113 FUC O4 HO4 sing N N 114 GLN N CA sing N N 115 GLN N H sing N N 116 GLN N H2 sing N N 117 GLN CA C sing N N 118 GLN CA CB sing N N 119 GLN CA HA sing N N 120 GLN C O doub N N 121 GLN C OXT sing N N 122 GLN CB CG sing N N 123 GLN CB HB2 sing N N 124 GLN CB HB3 sing N N 125 GLN CG CD sing N N 126 GLN CG HG2 sing N N 127 GLN CG HG3 sing N N 128 GLN CD OE1 doub N N 129 GLN CD NE2 sing N N 130 GLN NE2 HE21 sing N N 131 GLN NE2 HE22 sing N N 132 GLN OXT HXT sing N N 133 GLU N CA sing N N 134 GLU N H sing N N 135 GLU N H2 sing N N 136 GLU CA C sing N N 137 GLU CA CB sing N N 138 GLU CA HA sing N N 139 GLU C O doub N N 140 GLU C OXT sing N N 141 GLU CB CG sing N N 142 GLU CB HB2 sing N N 143 GLU CB HB3 sing N N 144 GLU CG CD sing N N 145 GLU CG HG2 sing N N 146 GLU CG HG3 sing N N 147 GLU CD OE1 doub N N 148 GLU CD OE2 sing N N 149 GLU OE2 HE2 sing N N 150 GLU OXT HXT sing N N 151 GLY N CA sing N N 152 GLY N H sing N N 153 GLY N H2 sing N N 154 GLY CA C sing N N 155 GLY CA HA2 sing N N 156 GLY CA HA3 sing N N 157 GLY C O doub N N 158 GLY C OXT sing N N 159 GLY OXT HXT sing N N 160 HIS N CA sing N N 161 HIS N H sing N N 162 HIS N H2 sing N N 163 HIS CA C sing N N 164 HIS CA CB sing N N 165 HIS CA HA sing N N 166 HIS C O doub N N 167 HIS C OXT sing N N 168 HIS CB CG sing N N 169 HIS CB HB2 sing N N 170 HIS CB HB3 sing N N 171 HIS CG ND1 sing Y N 172 HIS CG CD2 doub Y N 173 HIS ND1 CE1 doub Y N 174 HIS ND1 HD1 sing N N 175 HIS CD2 NE2 sing Y N 176 HIS CD2 HD2 sing N N 177 HIS CE1 NE2 sing Y N 178 HIS CE1 HE1 sing N N 179 HIS NE2 HE2 sing N N 180 HIS OXT HXT sing N N 181 HOH O H1 sing N N 182 HOH O H2 sing N N 183 ILE N CA sing N N 184 ILE N H sing N N 185 ILE N H2 sing N N 186 ILE CA C sing N N 187 ILE CA CB sing N N 188 ILE CA HA sing N N 189 ILE C O doub N N 190 ILE C OXT sing N N 191 ILE CB CG1 sing N N 192 ILE CB CG2 sing N N 193 ILE CB HB sing N N 194 ILE CG1 CD1 sing N N 195 ILE CG1 HG12 sing N N 196 ILE CG1 HG13 sing N N 197 ILE CG2 HG21 sing N N 198 ILE CG2 HG22 sing N N 199 ILE CG2 HG23 sing N N 200 ILE CD1 HD11 sing N N 201 ILE CD1 HD12 sing N N 202 ILE CD1 HD13 sing N N 203 ILE OXT HXT sing N N 204 LEU N CA sing N N 205 LEU N H sing N N 206 LEU N H2 sing N N 207 LEU CA C sing N N 208 LEU CA CB sing N N 209 LEU CA HA sing N N 210 LEU C O doub N N 211 LEU C OXT sing N N 212 LEU CB CG sing N N 213 LEU CB HB2 sing N N 214 LEU CB HB3 sing N N 215 LEU CG CD1 sing N N 216 LEU CG CD2 sing N N 217 LEU CG HG sing N N 218 LEU CD1 HD11 sing N N 219 LEU CD1 HD12 sing N N 220 LEU CD1 HD13 sing N N 221 LEU CD2 HD21 sing N N 222 LEU CD2 HD22 sing N N 223 LEU CD2 HD23 sing N N 224 LEU OXT HXT sing N N 225 LYS N CA sing N N 226 LYS N H sing N N 227 LYS N H2 sing N N 228 LYS CA C sing N N 229 LYS CA CB sing N N 230 LYS CA HA sing N N 231 LYS C O doub N N 232 LYS C OXT sing N N 233 LYS CB CG sing N N 234 LYS CB HB2 sing N N 235 LYS CB HB3 sing N N 236 LYS CG CD sing N N 237 LYS CG HG2 sing N N 238 LYS CG HG3 sing N N 239 LYS CD CE sing N N 240 LYS CD HD2 sing N N 241 LYS CD HD3 sing N N 242 LYS CE NZ sing N N 243 LYS CE HE2 sing N N 244 LYS CE HE3 sing N N 245 LYS NZ HZ1 sing N N 246 LYS NZ HZ2 sing N N 247 LYS NZ HZ3 sing N N 248 LYS OXT HXT sing N N 249 MET N CA sing N N 250 MET N H sing N N 251 MET N H2 sing N N 252 MET CA C sing N N 253 MET CA CB sing N N 254 MET CA HA sing N N 255 MET C O doub N N 256 MET C OXT sing N N 257 MET CB CG sing N N 258 MET CB HB2 sing N N 259 MET CB HB3 sing N N 260 MET CG SD sing N N 261 MET CG HG2 sing N N 262 MET CG HG3 sing N N 263 MET SD CE sing N N 264 MET CE HE1 sing N N 265 MET CE HE2 sing N N 266 MET CE HE3 sing N N 267 MET OXT HXT sing N N 268 NAG C1 C2 sing N N 269 NAG C1 O1 sing N N 270 NAG C1 O5 sing N N 271 NAG C1 H1 sing N N 272 NAG C2 C3 sing N N 273 NAG C2 N2 sing N N 274 NAG C2 H2 sing N N 275 NAG C3 C4 sing N N 276 NAG C3 O3 sing N N 277 NAG C3 H3 sing N N 278 NAG C4 C5 sing N N 279 NAG C4 O4 sing N N 280 NAG C4 H4 sing N N 281 NAG C5 C6 sing N N 282 NAG C5 O5 sing N N 283 NAG C5 H5 sing N N 284 NAG C6 O6 sing N N 285 NAG C6 H61 sing N N 286 NAG C6 H62 sing N N 287 NAG C7 C8 sing N N 288 NAG C7 N2 sing N N 289 NAG C7 O7 doub N N 290 NAG C8 H81 sing N N 291 NAG C8 H82 sing N N 292 NAG C8 H83 sing N N 293 NAG N2 HN2 sing N N 294 NAG O1 HO1 sing N N 295 NAG O3 HO3 sing N N 296 NAG O4 HO4 sing N N 297 NAG O6 HO6 sing N N 298 PHE N CA sing N N 299 PHE N H sing N N 300 PHE N H2 sing N N 301 PHE CA C sing N N 302 PHE CA CB sing N N 303 PHE CA HA sing N N 304 PHE C O doub N N 305 PHE C OXT sing N N 306 PHE CB CG sing N N 307 PHE CB HB2 sing N N 308 PHE CB HB3 sing N N 309 PHE CG CD1 doub Y N 310 PHE CG CD2 sing Y N 311 PHE CD1 CE1 sing Y N 312 PHE CD1 HD1 sing N N 313 PHE CD2 CE2 doub Y N 314 PHE CD2 HD2 sing N N 315 PHE CE1 CZ doub Y N 316 PHE CE1 HE1 sing N N 317 PHE CE2 CZ sing Y N 318 PHE CE2 HE2 sing N N 319 PHE CZ HZ sing N N 320 PHE OXT HXT sing N N 321 PRO N CA sing N N 322 PRO N CD sing N N 323 PRO N H sing N N 324 PRO CA C sing N N 325 PRO CA CB sing N N 326 PRO CA HA sing N N 327 PRO C O doub N N 328 PRO C OXT sing N N 329 PRO CB CG sing N N 330 PRO CB HB2 sing N N 331 PRO CB HB3 sing N N 332 PRO CG CD sing N N 333 PRO CG HG2 sing N N 334 PRO CG HG3 sing N N 335 PRO CD HD2 sing N N 336 PRO CD HD3 sing N N 337 PRO OXT HXT sing N N 338 SER N CA sing N N 339 SER N H sing N N 340 SER N H2 sing N N 341 SER CA C sing N N 342 SER CA CB sing N N 343 SER CA HA sing N N 344 SER C O doub N N 345 SER C OXT sing N N 346 SER CB OG sing N N 347 SER CB HB2 sing N N 348 SER CB HB3 sing N N 349 SER OG HG sing N N 350 SER OXT HXT sing N N 351 SO4 S O1 doub N N 352 SO4 S O2 doub N N 353 SO4 S O3 sing N N 354 SO4 S O4 sing N N 355 THR N CA sing N N 356 THR N H sing N N 357 THR N H2 sing N N 358 THR CA C sing N N 359 THR CA CB sing N N 360 THR CA HA sing N N 361 THR C O doub N N 362 THR C OXT sing N N 363 THR CB OG1 sing N N 364 THR CB CG2 sing N N 365 THR CB HB sing N N 366 THR OG1 HG1 sing N N 367 THR CG2 HG21 sing N N 368 THR CG2 HG22 sing N N 369 THR CG2 HG23 sing N N 370 THR OXT HXT sing N N 371 TRP N CA sing N N 372 TRP N H sing N N 373 TRP N H2 sing N N 374 TRP CA C sing N N 375 TRP CA CB sing N N 376 TRP CA HA sing N N 377 TRP C O doub N N 378 TRP C OXT sing N N 379 TRP CB CG sing N N 380 TRP CB HB2 sing N N 381 TRP CB HB3 sing N N 382 TRP CG CD1 doub Y N 383 TRP CG CD2 sing Y N 384 TRP CD1 NE1 sing Y N 385 TRP CD1 HD1 sing N N 386 TRP CD2 CE2 doub Y N 387 TRP CD2 CE3 sing Y N 388 TRP NE1 CE2 sing Y N 389 TRP NE1 HE1 sing N N 390 TRP CE2 CZ2 sing Y N 391 TRP CE3 CZ3 doub Y N 392 TRP CE3 HE3 sing N N 393 TRP CZ2 CH2 doub Y N 394 TRP CZ2 HZ2 sing N N 395 TRP CZ3 CH2 sing Y N 396 TRP CZ3 HZ3 sing N N 397 TRP CH2 HH2 sing N N 398 TRP OXT HXT sing N N 399 TYR N CA sing N N 400 TYR N H sing N N 401 TYR N H2 sing N N 402 TYR CA C sing N N 403 TYR CA CB sing N N 404 TYR CA HA sing N N 405 TYR C O doub N N 406 TYR C OXT sing N N 407 TYR CB CG sing N N 408 TYR CB HB2 sing N N 409 TYR CB HB3 sing N N 410 TYR CG CD1 doub Y N 411 TYR CG CD2 sing Y N 412 TYR CD1 CE1 sing Y N 413 TYR CD1 HD1 sing N N 414 TYR CD2 CE2 doub Y N 415 TYR CD2 HD2 sing N N 416 TYR CE1 CZ doub Y N 417 TYR CE1 HE1 sing N N 418 TYR CE2 CZ sing Y N 419 TYR CE2 HE2 sing N N 420 TYR CZ OH sing N N 421 TYR OH HH sing N N 422 TYR OXT HXT sing N N 423 VAL N CA sing N N 424 VAL N H sing N N 425 VAL N H2 sing N N 426 VAL CA C sing N N 427 VAL CA CB sing N N 428 VAL CA HA sing N N 429 VAL C O doub N N 430 VAL C OXT sing N N 431 VAL CB CG1 sing N N 432 VAL CB CG2 sing N N 433 VAL CB HB sing N N 434 VAL CG1 HG11 sing N N 435 VAL CG1 HG12 sing N N 436 VAL CG1 HG13 sing N N 437 VAL CG2 HG21 sing N N 438 VAL CG2 HG22 sing N N 439 VAL CG2 HG23 sing N N 440 VAL OXT HXT sing N N 441 # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 FUC 2 n 2 FUC 3 n # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1SPJ _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 8YGY _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.021878 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014579 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012429 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.3103 20.8439 1.0201 10.2075 1.5888 0.5687 0.8651 51.6512 0.2156 H 1 1 0.4930 10.5109 0.3229 26.1257 0.1402 3.1424 0.0408 57.7997 0.0030 N 7 7 12.2220 0.0057 3.1346 9.8933 2.0141 28.9975 1.1672 0.5826 -11.5379 O 8 8 3.0487 13.2771 2.2870 5.7011 1.5464 0.3239 0.8671 32.9089 0.2508 S 16 16 6.9054 1.4679 5.2035 22.2151 1.4379 0.2536 1.5863 56.1720 1.1035 # loop_