data_9FOR # _entry.id 9FOR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9FOR pdb_00009for 10.2210/pdb9for/pdb WWPDB D_1292139349 ? ? EMDB EMD-50628 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-07-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9FOR _pdbx_database_status.recvd_initial_deposition_date 2024-06-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'heteromeric amyloid filament composed of TDP-43 and AXNA11 from FTLD-TDP type C variant 1' _pdbx_database_related.db_id EMD-50628 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email bfalcon@mrc-lmb.cam.ac.uk _pdbx_contact_author.name_first Benjamin _pdbx_contact_author.name_last Ryskeldi-Falcon _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-8176-2618 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Arseni, D.' 1 0000-0001-7585-288X 'Ryskeldi-Falcon, B.' 2 0000-0002-8176-2618 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biorxiv _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2692-8205 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Heteromeric amyloid filaments of ANXA11 and TDP-43 in FTLD-TDP Type C.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1101/2024.06.25.600403 _citation.pdbx_database_id_PubMed 38979278 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Arseni, D.' 1 0000-0001-7585-288X primary 'Nonaka, T.' 2 0000-0002-0830-9403 primary 'Jacobsen, M.H.' 3 ? primary 'Murzin, A.G.' 4 ? primary 'Cracco, L.' 5 0000-0001-7693-0202 primary 'Peak-Chew, S.Y.' 6 ? primary 'Garringer, H.J.' 7 0000-0002-1899-7676 primary 'Kawakami, I.' 8 ? primary 'Suzuki, H.' 9 ? primary 'Onaya, M.' 10 ? primary 'Saito, Y.' 11 ? primary 'Murayama, S.' 12 0000-0001-9709-5242 primary 'Geula, C.' 13 ? primary 'Vidal, R.' 14 0000-0002-5803-3871 primary 'Newell, K.L.' 15 ? primary 'Mesulam, M.' 16 ? primary 'Ghetti, B.' 17 ? primary 'Hasegawa, M.' 18 ? primary 'Ryskeldi-Falcon, B.' 19 0000-0002-8176-2618 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'TAR DNA-binding protein 43' 6027.645 5 ? ? ? ? 2 polymer nat 'Annexin A11' 3805.148 5 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 TDP-43 2 '56 kDa autoantigen,Annexin XI,Annexin-11,Calcyclin-associated annexin 50,CAP-50' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no GNQGGFGNSRGGGAGLGNNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQN GNQGGFGNSRGGGAGLGNNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQN o,A,C,E,G ? 2 'polypeptide(L)' no no LDNVATYAGQFNQDYLSGMAANMSGTFGGANMPNLY LDNVATYAGQFNQDYLSGMAANMSGTFGGANMPNLY p,B,D,F,H ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ASN n 1 3 GLN n 1 4 GLY n 1 5 GLY n 1 6 PHE n 1 7 GLY n 1 8 ASN n 1 9 SER n 1 10 ARG n 1 11 GLY n 1 12 GLY n 1 13 GLY n 1 14 ALA n 1 15 GLY n 1 16 LEU n 1 17 GLY n 1 18 ASN n 1 19 ASN n 1 20 GLN n 1 21 GLY n 1 22 SER n 1 23 ASN n 1 24 MET n 1 25 GLY n 1 26 GLY n 1 27 GLY n 1 28 MET n 1 29 ASN n 1 30 PHE n 1 31 GLY n 1 32 ALA n 1 33 PHE n 1 34 SER n 1 35 ILE n 1 36 ASN n 1 37 PRO n 1 38 ALA n 1 39 MET n 1 40 MET n 1 41 ALA n 1 42 ALA n 1 43 ALA n 1 44 GLN n 1 45 ALA n 1 46 ALA n 1 47 LEU n 1 48 GLN n 1 49 SER n 1 50 SER n 1 51 TRP n 1 52 GLY n 1 53 MET n 1 54 MET n 1 55 GLY n 1 56 MET n 1 57 LEU n 1 58 ALA n 1 59 SER n 1 60 GLN n 1 61 GLN n 1 62 ASN n 2 1 LEU n 2 2 ASP n 2 3 ASN n 2 4 VAL n 2 5 ALA n 2 6 THR n 2 7 TYR n 2 8 ALA n 2 9 GLY n 2 10 GLN n 2 11 PHE n 2 12 ASN n 2 13 GLN n 2 14 ASP n 2 15 TYR n 2 16 LEU n 2 17 SER n 2 18 GLY n 2 19 MET n 2 20 ALA n 2 21 ALA n 2 22 ASN n 2 23 MET n 2 24 SER n 2 25 GLY n 2 26 THR n 2 27 PHE n 2 28 GLY n 2 29 GLY n 2 30 ALA n 2 31 ASN n 2 32 MET n 2 33 PRO n 2 34 ASN n 2 35 LEU n 2 36 TYR n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample 1 62 human 'Homo sapiens' 9606 ? ? ? Brain ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 1 36 human 'Homo sapiens' 9606 ? ? ? Brain ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 284 284 GLY GLY o . n A 1 2 ASN 2 285 285 ASN ASN o . n A 1 3 GLN 3 286 286 GLN GLN o . n A 1 4 GLY 4 287 287 GLY GLY o . n A 1 5 GLY 5 288 288 GLY GLY o . n A 1 6 PHE 6 289 289 PHE PHE o . n A 1 7 GLY 7 290 290 GLY GLY o . n A 1 8 ASN 8 291 291 ASN ASN o . n A 1 9 SER 9 292 292 SER SER o . n A 1 10 ARG 10 293 293 ARG ARG o . n A 1 11 GLY 11 294 294 GLY GLY o . n A 1 12 GLY 12 295 295 GLY GLY o . n A 1 13 GLY 13 296 296 GLY GLY o . n A 1 14 ALA 14 297 297 ALA ALA o . n A 1 15 GLY 15 298 298 GLY GLY o . n A 1 16 LEU 16 299 299 LEU LEU o . n A 1 17 GLY 17 300 300 GLY GLY o . n A 1 18 ASN 18 301 301 ASN ASN o . n A 1 19 ASN 19 302 302 ASN ASN o . n A 1 20 GLN 20 303 303 GLN GLN o . n A 1 21 GLY 21 304 304 GLY GLY o . n A 1 22 SER 22 305 305 SER SER o . n A 1 23 ASN 23 306 306 ASN ASN o . n A 1 24 MET 24 307 307 MET MET o . n A 1 25 GLY 25 308 308 GLY GLY o . n A 1 26 GLY 26 309 309 GLY GLY o . n A 1 27 GLY 27 310 310 GLY GLY o . n A 1 28 MET 28 311 311 MET MET o . n A 1 29 ASN 29 312 312 ASN ASN o . n A 1 30 PHE 30 313 313 PHE PHE o . n A 1 31 GLY 31 314 314 GLY GLY o . n A 1 32 ALA 32 315 315 ALA ALA o . n A 1 33 PHE 33 316 316 PHE PHE o . n A 1 34 SER 34 317 317 SER SER o . n A 1 35 ILE 35 318 318 ILE ILE o . n A 1 36 ASN 36 319 319 ASN ASN o . n A 1 37 PRO 37 320 320 PRO PRO o . n A 1 38 ALA 38 321 321 ALA ALA o . n A 1 39 MET 39 322 322 MET MET o . n A 1 40 MET 40 323 323 MET MET o . n A 1 41 ALA 41 324 324 ALA ALA o . n A 1 42 ALA 42 325 325 ALA ALA o . n A 1 43 ALA 43 326 326 ALA ALA o . n A 1 44 GLN 44 327 327 GLN GLN o . n A 1 45 ALA 45 328 328 ALA ALA o . n A 1 46 ALA 46 329 329 ALA ALA o . n A 1 47 LEU 47 330 330 LEU LEU o . n A 1 48 GLN 48 331 331 GLN GLN o . n A 1 49 SER 49 332 332 SER SER o . n A 1 50 SER 50 333 333 SER SER o . n A 1 51 TRP 51 334 334 TRP TRP o . n A 1 52 GLY 52 335 335 GLY GLY o . n A 1 53 MET 53 336 336 MET MET o . n A 1 54 MET 54 337 337 MET MET o . n A 1 55 GLY 55 338 338 GLY GLY o . n A 1 56 MET 56 339 339 MET MET o . n A 1 57 LEU 57 340 340 LEU LEU o . n A 1 58 ALA 58 341 341 ALA ALA o . n A 1 59 SER 59 342 342 SER SER o . n A 1 60 GLN 60 343 343 GLN GLN o . n A 1 61 GLN 61 344 344 GLN GLN o . n A 1 62 ASN 62 345 345 ASN ASN o . n B 2 1 LEU 1 39 39 LEU LEU p . n B 2 2 ASP 2 40 40 ASP ASP p . n B 2 3 ASN 3 41 41 ASN ASN p . n B 2 4 VAL 4 42 42 VAL VAL p . n B 2 5 ALA 5 43 43 ALA ALA p . n B 2 6 THR 6 44 44 THR THR p . n B 2 7 TYR 7 45 45 TYR TYR p . n B 2 8 ALA 8 46 46 ALA ALA p . n B 2 9 GLY 9 47 47 GLY GLY p . n B 2 10 GLN 10 48 48 GLN GLN p . n B 2 11 PHE 11 49 49 PHE PHE p . n B 2 12 ASN 12 50 50 ASN ASN p . n B 2 13 GLN 13 51 51 GLN GLN p . n B 2 14 ASP 14 52 52 ASP ASP p . n B 2 15 TYR 15 53 53 TYR TYR p . n B 2 16 LEU 16 54 54 LEU LEU p . n B 2 17 SER 17 55 55 SER SER p . n B 2 18 GLY 18 56 56 GLY GLY p . n B 2 19 MET 19 57 57 MET MET p . n B 2 20 ALA 20 58 58 ALA ALA p . n B 2 21 ALA 21 59 59 ALA ALA p . n B 2 22 ASN 22 60 60 ASN ASN p . n B 2 23 MET 23 61 61 MET MET p . n B 2 24 SER 24 62 62 SER SER p . n B 2 25 GLY 25 63 63 GLY GLY p . n B 2 26 THR 26 64 64 THR THR p . n B 2 27 PHE 27 65 65 PHE PHE p . n B 2 28 GLY 28 66 66 GLY GLY p . n B 2 29 GLY 29 67 67 GLY GLY p . n B 2 30 ALA 30 68 68 ALA ALA p . n B 2 31 ASN 31 69 69 ASN ASN p . n B 2 32 MET 32 70 70 MET MET p . n B 2 33 PRO 33 71 71 PRO PRO p . n B 2 34 ASN 34 72 72 ASN ASN p . n B 2 35 LEU 35 73 73 LEU LEU p . n B 2 36 TYR 36 74 74 TYR TYR p . n C 1 1 GLY 1 284 284 GLY GLY A . n C 1 2 ASN 2 285 285 ASN ASN A . n C 1 3 GLN 3 286 286 GLN GLN A . n C 1 4 GLY 4 287 287 GLY GLY A . n C 1 5 GLY 5 288 288 GLY GLY A . n C 1 6 PHE 6 289 289 PHE PHE A . n C 1 7 GLY 7 290 290 GLY GLY A . n C 1 8 ASN 8 291 291 ASN ASN A . n C 1 9 SER 9 292 292 SER SER A . n C 1 10 ARG 10 293 293 ARG ARG A . n C 1 11 GLY 11 294 294 GLY GLY A . n C 1 12 GLY 12 295 295 GLY GLY A . n C 1 13 GLY 13 296 296 GLY GLY A . n C 1 14 ALA 14 297 297 ALA ALA A . n C 1 15 GLY 15 298 298 GLY GLY A . n C 1 16 LEU 16 299 299 LEU LEU A . n C 1 17 GLY 17 300 300 GLY GLY A . n C 1 18 ASN 18 301 301 ASN ASN A . n C 1 19 ASN 19 302 302 ASN ASN A . n C 1 20 GLN 20 303 303 GLN GLN A . n C 1 21 GLY 21 304 304 GLY GLY A . n C 1 22 SER 22 305 305 SER SER A . n C 1 23 ASN 23 306 306 ASN ASN A . n C 1 24 MET 24 307 307 MET MET A . n C 1 25 GLY 25 308 308 GLY GLY A . n C 1 26 GLY 26 309 309 GLY GLY A . n C 1 27 GLY 27 310 310 GLY GLY A . n C 1 28 MET 28 311 311 MET MET A . n C 1 29 ASN 29 312 312 ASN ASN A . n C 1 30 PHE 30 313 313 PHE PHE A . n C 1 31 GLY 31 314 314 GLY GLY A . n C 1 32 ALA 32 315 315 ALA ALA A . n C 1 33 PHE 33 316 316 PHE PHE A . n C 1 34 SER 34 317 317 SER SER A . n C 1 35 ILE 35 318 318 ILE ILE A . n C 1 36 ASN 36 319 319 ASN ASN A . n C 1 37 PRO 37 320 320 PRO PRO A . n C 1 38 ALA 38 321 321 ALA ALA A . n C 1 39 MET 39 322 322 MET MET A . n C 1 40 MET 40 323 323 MET MET A . n C 1 41 ALA 41 324 324 ALA ALA A . n C 1 42 ALA 42 325 325 ALA ALA A . n C 1 43 ALA 43 326 326 ALA ALA A . n C 1 44 GLN 44 327 327 GLN GLN A . n C 1 45 ALA 45 328 328 ALA ALA A . n C 1 46 ALA 46 329 329 ALA ALA A . n C 1 47 LEU 47 330 330 LEU LEU A . n C 1 48 GLN 48 331 331 GLN GLN A . n C 1 49 SER 49 332 332 SER SER A . n C 1 50 SER 50 333 333 SER SER A . n C 1 51 TRP 51 334 334 TRP TRP A . n C 1 52 GLY 52 335 335 GLY GLY A . n C 1 53 MET 53 336 336 MET MET A . n C 1 54 MET 54 337 337 MET MET A . n C 1 55 GLY 55 338 338 GLY GLY A . n C 1 56 MET 56 339 339 MET MET A . n C 1 57 LEU 57 340 340 LEU LEU A . n C 1 58 ALA 58 341 341 ALA ALA A . n C 1 59 SER 59 342 342 SER SER A . n C 1 60 GLN 60 343 343 GLN GLN A . n C 1 61 GLN 61 344 344 GLN GLN A . n C 1 62 ASN 62 345 345 ASN ASN A . n D 2 1 LEU 1 39 39 LEU LEU B . n D 2 2 ASP 2 40 40 ASP ASP B . n D 2 3 ASN 3 41 41 ASN ASN B . n D 2 4 VAL 4 42 42 VAL VAL B . n D 2 5 ALA 5 43 43 ALA ALA B . n D 2 6 THR 6 44 44 THR THR B . n D 2 7 TYR 7 45 45 TYR TYR B . n D 2 8 ALA 8 46 46 ALA ALA B . n D 2 9 GLY 9 47 47 GLY GLY B . n D 2 10 GLN 10 48 48 GLN GLN B . n D 2 11 PHE 11 49 49 PHE PHE B . n D 2 12 ASN 12 50 50 ASN ASN B . n D 2 13 GLN 13 51 51 GLN GLN B . n D 2 14 ASP 14 52 52 ASP ASP B . n D 2 15 TYR 15 53 53 TYR TYR B . n D 2 16 LEU 16 54 54 LEU LEU B . n D 2 17 SER 17 55 55 SER SER B . n D 2 18 GLY 18 56 56 GLY GLY B . n D 2 19 MET 19 57 57 MET MET B . n D 2 20 ALA 20 58 58 ALA ALA B . n D 2 21 ALA 21 59 59 ALA ALA B . n D 2 22 ASN 22 60 60 ASN ASN B . n D 2 23 MET 23 61 61 MET MET B . n D 2 24 SER 24 62 62 SER SER B . n D 2 25 GLY 25 63 63 GLY GLY B . n D 2 26 THR 26 64 64 THR THR B . n D 2 27 PHE 27 65 65 PHE PHE B . n D 2 28 GLY 28 66 66 GLY GLY B . n D 2 29 GLY 29 67 67 GLY GLY B . n D 2 30 ALA 30 68 68 ALA ALA B . n D 2 31 ASN 31 69 69 ASN ASN B . n D 2 32 MET 32 70 70 MET MET B . n D 2 33 PRO 33 71 71 PRO PRO B . n D 2 34 ASN 34 72 72 ASN ASN B . n D 2 35 LEU 35 73 73 LEU LEU B . n D 2 36 TYR 36 74 74 TYR TYR B . n E 1 1 GLY 1 284 284 GLY GLY C . n E 1 2 ASN 2 285 285 ASN ASN C . n E 1 3 GLN 3 286 286 GLN GLN C . n E 1 4 GLY 4 287 287 GLY GLY C . n E 1 5 GLY 5 288 288 GLY GLY C . n E 1 6 PHE 6 289 289 PHE PHE C . n E 1 7 GLY 7 290 290 GLY GLY C . n E 1 8 ASN 8 291 291 ASN ASN C . n E 1 9 SER 9 292 292 SER SER C . n E 1 10 ARG 10 293 293 ARG ARG C . n E 1 11 GLY 11 294 294 GLY GLY C . n E 1 12 GLY 12 295 295 GLY GLY C . n E 1 13 GLY 13 296 296 GLY GLY C . n E 1 14 ALA 14 297 297 ALA ALA C . n E 1 15 GLY 15 298 298 GLY GLY C . n E 1 16 LEU 16 299 299 LEU LEU C . n E 1 17 GLY 17 300 300 GLY GLY C . n E 1 18 ASN 18 301 301 ASN ASN C . n E 1 19 ASN 19 302 302 ASN ASN C . n E 1 20 GLN 20 303 303 GLN GLN C . n E 1 21 GLY 21 304 304 GLY GLY C . n E 1 22 SER 22 305 305 SER SER C . n E 1 23 ASN 23 306 306 ASN ASN C . n E 1 24 MET 24 307 307 MET MET C . n E 1 25 GLY 25 308 308 GLY GLY C . n E 1 26 GLY 26 309 309 GLY GLY C . n E 1 27 GLY 27 310 310 GLY GLY C . n E 1 28 MET 28 311 311 MET MET C . n E 1 29 ASN 29 312 312 ASN ASN C . n E 1 30 PHE 30 313 313 PHE PHE C . n E 1 31 GLY 31 314 314 GLY GLY C . n E 1 32 ALA 32 315 315 ALA ALA C . n E 1 33 PHE 33 316 316 PHE PHE C . n E 1 34 SER 34 317 317 SER SER C . n E 1 35 ILE 35 318 318 ILE ILE C . n E 1 36 ASN 36 319 319 ASN ASN C . n E 1 37 PRO 37 320 320 PRO PRO C . n E 1 38 ALA 38 321 321 ALA ALA C . n E 1 39 MET 39 322 322 MET MET C . n E 1 40 MET 40 323 323 MET MET C . n E 1 41 ALA 41 324 324 ALA ALA C . n E 1 42 ALA 42 325 325 ALA ALA C . n E 1 43 ALA 43 326 326 ALA ALA C . n E 1 44 GLN 44 327 327 GLN GLN C . n E 1 45 ALA 45 328 328 ALA ALA C . n E 1 46 ALA 46 329 329 ALA ALA C . n E 1 47 LEU 47 330 330 LEU LEU C . n E 1 48 GLN 48 331 331 GLN GLN C . n E 1 49 SER 49 332 332 SER SER C . n E 1 50 SER 50 333 333 SER SER C . n E 1 51 TRP 51 334 334 TRP TRP C . n E 1 52 GLY 52 335 335 GLY GLY C . n E 1 53 MET 53 336 336 MET MET C . n E 1 54 MET 54 337 337 MET MET C . n E 1 55 GLY 55 338 338 GLY GLY C . n E 1 56 MET 56 339 339 MET MET C . n E 1 57 LEU 57 340 340 LEU LEU C . n E 1 58 ALA 58 341 341 ALA ALA C . n E 1 59 SER 59 342 342 SER SER C . n E 1 60 GLN 60 343 343 GLN GLN C . n E 1 61 GLN 61 344 344 GLN GLN C . n E 1 62 ASN 62 345 345 ASN ASN C . n F 2 1 LEU 1 39 39 LEU LEU D . n F 2 2 ASP 2 40 40 ASP ASP D . n F 2 3 ASN 3 41 41 ASN ASN D . n F 2 4 VAL 4 42 42 VAL VAL D . n F 2 5 ALA 5 43 43 ALA ALA D . n F 2 6 THR 6 44 44 THR THR D . n F 2 7 TYR 7 45 45 TYR TYR D . n F 2 8 ALA 8 46 46 ALA ALA D . n F 2 9 GLY 9 47 47 GLY GLY D . n F 2 10 GLN 10 48 48 GLN GLN D . n F 2 11 PHE 11 49 49 PHE PHE D . n F 2 12 ASN 12 50 50 ASN ASN D . n F 2 13 GLN 13 51 51 GLN GLN D . n F 2 14 ASP 14 52 52 ASP ASP D . n F 2 15 TYR 15 53 53 TYR TYR D . n F 2 16 LEU 16 54 54 LEU LEU D . n F 2 17 SER 17 55 55 SER SER D . n F 2 18 GLY 18 56 56 GLY GLY D . n F 2 19 MET 19 57 57 MET MET D . n F 2 20 ALA 20 58 58 ALA ALA D . n F 2 21 ALA 21 59 59 ALA ALA D . n F 2 22 ASN 22 60 60 ASN ASN D . n F 2 23 MET 23 61 61 MET MET D . n F 2 24 SER 24 62 62 SER SER D . n F 2 25 GLY 25 63 63 GLY GLY D . n F 2 26 THR 26 64 64 THR THR D . n F 2 27 PHE 27 65 65 PHE PHE D . n F 2 28 GLY 28 66 66 GLY GLY D . n F 2 29 GLY 29 67 67 GLY GLY D . n F 2 30 ALA 30 68 68 ALA ALA D . n F 2 31 ASN 31 69 69 ASN ASN D . n F 2 32 MET 32 70 70 MET MET D . n F 2 33 PRO 33 71 71 PRO PRO D . n F 2 34 ASN 34 72 72 ASN ASN D . n F 2 35 LEU 35 73 73 LEU LEU D . n F 2 36 TYR 36 74 74 TYR TYR D . n G 1 1 GLY 1 284 284 GLY GLY E . n G 1 2 ASN 2 285 285 ASN ASN E . n G 1 3 GLN 3 286 286 GLN GLN E . n G 1 4 GLY 4 287 287 GLY GLY E . n G 1 5 GLY 5 288 288 GLY GLY E . n G 1 6 PHE 6 289 289 PHE PHE E . n G 1 7 GLY 7 290 290 GLY GLY E . n G 1 8 ASN 8 291 291 ASN ASN E . n G 1 9 SER 9 292 292 SER SER E . n G 1 10 ARG 10 293 293 ARG ARG E . n G 1 11 GLY 11 294 294 GLY GLY E . n G 1 12 GLY 12 295 295 GLY GLY E . n G 1 13 GLY 13 296 296 GLY GLY E . n G 1 14 ALA 14 297 297 ALA ALA E . n G 1 15 GLY 15 298 298 GLY GLY E . n G 1 16 LEU 16 299 299 LEU LEU E . n G 1 17 GLY 17 300 300 GLY GLY E . n G 1 18 ASN 18 301 301 ASN ASN E . n G 1 19 ASN 19 302 302 ASN ASN E . n G 1 20 GLN 20 303 303 GLN GLN E . n G 1 21 GLY 21 304 304 GLY GLY E . n G 1 22 SER 22 305 305 SER SER E . n G 1 23 ASN 23 306 306 ASN ASN E . n G 1 24 MET 24 307 307 MET MET E . n G 1 25 GLY 25 308 308 GLY GLY E . n G 1 26 GLY 26 309 309 GLY GLY E . n G 1 27 GLY 27 310 310 GLY GLY E . n G 1 28 MET 28 311 311 MET MET E . n G 1 29 ASN 29 312 312 ASN ASN E . n G 1 30 PHE 30 313 313 PHE PHE E . n G 1 31 GLY 31 314 314 GLY GLY E . n G 1 32 ALA 32 315 315 ALA ALA E . n G 1 33 PHE 33 316 316 PHE PHE E . n G 1 34 SER 34 317 317 SER SER E . n G 1 35 ILE 35 318 318 ILE ILE E . n G 1 36 ASN 36 319 319 ASN ASN E . n G 1 37 PRO 37 320 320 PRO PRO E . n G 1 38 ALA 38 321 321 ALA ALA E . n G 1 39 MET 39 322 322 MET MET E . n G 1 40 MET 40 323 323 MET MET E . n G 1 41 ALA 41 324 324 ALA ALA E . n G 1 42 ALA 42 325 325 ALA ALA E . n G 1 43 ALA 43 326 326 ALA ALA E . n G 1 44 GLN 44 327 327 GLN GLN E . n G 1 45 ALA 45 328 328 ALA ALA E . n G 1 46 ALA 46 329 329 ALA ALA E . n G 1 47 LEU 47 330 330 LEU LEU E . n G 1 48 GLN 48 331 331 GLN GLN E . n G 1 49 SER 49 332 332 SER SER E . n G 1 50 SER 50 333 333 SER SER E . n G 1 51 TRP 51 334 334 TRP TRP E . n G 1 52 GLY 52 335 335 GLY GLY E . n G 1 53 MET 53 336 336 MET MET E . n G 1 54 MET 54 337 337 MET MET E . n G 1 55 GLY 55 338 338 GLY GLY E . n G 1 56 MET 56 339 339 MET MET E . n G 1 57 LEU 57 340 340 LEU LEU E . n G 1 58 ALA 58 341 341 ALA ALA E . n G 1 59 SER 59 342 342 SER SER E . n G 1 60 GLN 60 343 343 GLN GLN E . n G 1 61 GLN 61 344 344 GLN GLN E . n G 1 62 ASN 62 345 345 ASN ASN E . n H 2 1 LEU 1 39 39 LEU LEU F . n H 2 2 ASP 2 40 40 ASP ASP F . n H 2 3 ASN 3 41 41 ASN ASN F . n H 2 4 VAL 4 42 42 VAL VAL F . n H 2 5 ALA 5 43 43 ALA ALA F . n H 2 6 THR 6 44 44 THR THR F . n H 2 7 TYR 7 45 45 TYR TYR F . n H 2 8 ALA 8 46 46 ALA ALA F . n H 2 9 GLY 9 47 47 GLY GLY F . n H 2 10 GLN 10 48 48 GLN GLN F . n H 2 11 PHE 11 49 49 PHE PHE F . n H 2 12 ASN 12 50 50 ASN ASN F . n H 2 13 GLN 13 51 51 GLN GLN F . n H 2 14 ASP 14 52 52 ASP ASP F . n H 2 15 TYR 15 53 53 TYR TYR F . n H 2 16 LEU 16 54 54 LEU LEU F . n H 2 17 SER 17 55 55 SER SER F . n H 2 18 GLY 18 56 56 GLY GLY F . n H 2 19 MET 19 57 57 MET MET F . n H 2 20 ALA 20 58 58 ALA ALA F . n H 2 21 ALA 21 59 59 ALA ALA F . n H 2 22 ASN 22 60 60 ASN ASN F . n H 2 23 MET 23 61 61 MET MET F . n H 2 24 SER 24 62 62 SER SER F . n H 2 25 GLY 25 63 63 GLY GLY F . n H 2 26 THR 26 64 64 THR THR F . n H 2 27 PHE 27 65 65 PHE PHE F . n H 2 28 GLY 28 66 66 GLY GLY F . n H 2 29 GLY 29 67 67 GLY GLY F . n H 2 30 ALA 30 68 68 ALA ALA F . n H 2 31 ASN 31 69 69 ASN ASN F . n H 2 32 MET 32 70 70 MET MET F . n H 2 33 PRO 33 71 71 PRO PRO F . n H 2 34 ASN 34 72 72 ASN ASN F . n H 2 35 LEU 35 73 73 LEU LEU F . n H 2 36 TYR 36 74 74 TYR TYR F . n I 1 1 GLY 1 284 284 GLY GLY G . n I 1 2 ASN 2 285 285 ASN ASN G . n I 1 3 GLN 3 286 286 GLN GLN G . n I 1 4 GLY 4 287 287 GLY GLY G . n I 1 5 GLY 5 288 288 GLY GLY G . n I 1 6 PHE 6 289 289 PHE PHE G . n I 1 7 GLY 7 290 290 GLY GLY G . n I 1 8 ASN 8 291 291 ASN ASN G . n I 1 9 SER 9 292 292 SER SER G . n I 1 10 ARG 10 293 293 ARG ARG G . n I 1 11 GLY 11 294 294 GLY GLY G . n I 1 12 GLY 12 295 295 GLY GLY G . n I 1 13 GLY 13 296 296 GLY GLY G . n I 1 14 ALA 14 297 297 ALA ALA G . n I 1 15 GLY 15 298 298 GLY GLY G . n I 1 16 LEU 16 299 299 LEU LEU G . n I 1 17 GLY 17 300 300 GLY GLY G . n I 1 18 ASN 18 301 301 ASN ASN G . n I 1 19 ASN 19 302 302 ASN ASN G . n I 1 20 GLN 20 303 303 GLN GLN G . n I 1 21 GLY 21 304 304 GLY GLY G . n I 1 22 SER 22 305 305 SER SER G . n I 1 23 ASN 23 306 306 ASN ASN G . n I 1 24 MET 24 307 307 MET MET G . n I 1 25 GLY 25 308 308 GLY GLY G . n I 1 26 GLY 26 309 309 GLY GLY G . n I 1 27 GLY 27 310 310 GLY GLY G . n I 1 28 MET 28 311 311 MET MET G . n I 1 29 ASN 29 312 312 ASN ASN G . n I 1 30 PHE 30 313 313 PHE PHE G . n I 1 31 GLY 31 314 314 GLY GLY G . n I 1 32 ALA 32 315 315 ALA ALA G . n I 1 33 PHE 33 316 316 PHE PHE G . n I 1 34 SER 34 317 317 SER SER G . n I 1 35 ILE 35 318 318 ILE ILE G . n I 1 36 ASN 36 319 319 ASN ASN G . n I 1 37 PRO 37 320 320 PRO PRO G . n I 1 38 ALA 38 321 321 ALA ALA G . n I 1 39 MET 39 322 322 MET MET G . n I 1 40 MET 40 323 323 MET MET G . n I 1 41 ALA 41 324 324 ALA ALA G . n I 1 42 ALA 42 325 325 ALA ALA G . n I 1 43 ALA 43 326 326 ALA ALA G . n I 1 44 GLN 44 327 327 GLN GLN G . n I 1 45 ALA 45 328 328 ALA ALA G . n I 1 46 ALA 46 329 329 ALA ALA G . n I 1 47 LEU 47 330 330 LEU LEU G . n I 1 48 GLN 48 331 331 GLN GLN G . n I 1 49 SER 49 332 332 SER SER G . n I 1 50 SER 50 333 333 SER SER G . n I 1 51 TRP 51 334 334 TRP TRP G . n I 1 52 GLY 52 335 335 GLY GLY G . n I 1 53 MET 53 336 336 MET MET G . n I 1 54 MET 54 337 337 MET MET G . n I 1 55 GLY 55 338 338 GLY GLY G . n I 1 56 MET 56 339 339 MET MET G . n I 1 57 LEU 57 340 340 LEU LEU G . n I 1 58 ALA 58 341 341 ALA ALA G . n I 1 59 SER 59 342 342 SER SER G . n I 1 60 GLN 60 343 343 GLN GLN G . n I 1 61 GLN 61 344 344 GLN GLN G . n I 1 62 ASN 62 345 345 ASN ASN G . n J 2 1 LEU 1 39 39 LEU LEU H . n J 2 2 ASP 2 40 40 ASP ASP H . n J 2 3 ASN 3 41 41 ASN ASN H . n J 2 4 VAL 4 42 42 VAL VAL H . n J 2 5 ALA 5 43 43 ALA ALA H . n J 2 6 THR 6 44 44 THR THR H . n J 2 7 TYR 7 45 45 TYR TYR H . n J 2 8 ALA 8 46 46 ALA ALA H . n J 2 9 GLY 9 47 47 GLY GLY H . n J 2 10 GLN 10 48 48 GLN GLN H . n J 2 11 PHE 11 49 49 PHE PHE H . n J 2 12 ASN 12 50 50 ASN ASN H . n J 2 13 GLN 13 51 51 GLN GLN H . n J 2 14 ASP 14 52 52 ASP ASP H . n J 2 15 TYR 15 53 53 TYR TYR H . n J 2 16 LEU 16 54 54 LEU LEU H . n J 2 17 SER 17 55 55 SER SER H . n J 2 18 GLY 18 56 56 GLY GLY H . n J 2 19 MET 19 57 57 MET MET H . n J 2 20 ALA 20 58 58 ALA ALA H . n J 2 21 ALA 21 59 59 ALA ALA H . n J 2 22 ASN 22 60 60 ASN ASN H . n J 2 23 MET 23 61 61 MET MET H . n J 2 24 SER 24 62 62 SER SER H . n J 2 25 GLY 25 63 63 GLY GLY H . n J 2 26 THR 26 64 64 THR THR H . n J 2 27 PHE 27 65 65 PHE PHE H . n J 2 28 GLY 28 66 66 GLY GLY H . n J 2 29 GLY 29 67 67 GLY GLY H . n J 2 30 ALA 30 68 68 ALA ALA H . n J 2 31 ASN 31 69 69 ASN ASN H . n J 2 32 MET 32 70 70 MET MET H . n J 2 33 PRO 33 71 71 PRO PRO H . n J 2 34 ASN 34 72 72 ASN ASN H . n J 2 35 LEU 35 73 73 LEU LEU H . n J 2 36 TYR 36 74 74 TYR TYR H . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9FOR _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9FOR _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9FOR _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 55.771 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.819 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9FOR _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.75 _refine.ls_d_res_low 96.32 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 37909 _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 100.00 _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.30999 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.30999 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'PARAMETERS FOR MASK CACLULATION' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.119 _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B 6.419 _refine.overall_SU_ML 0.128 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id 1 _refine_hist.details ? _refine_hist.d_res_high . _refine_hist.d_res_low . _refine_hist.number_atoms_solvent ? _refine_hist.number_atoms_total 689 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein ? _refine_hist.pdbx_number_atoms_nucleic_acid ? _refine_hist.pdbx_number_atoms_ligand ? _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.009 0.011 699 ? r_bond_refined_d ? ? 'ELECTRON MICROSCOPY' ? 0.000 0.016 619 ? r_bond_other_d ? ? 'ELECTRON MICROSCOPY' ? 2.139 1.723 934 ? r_angle_refined_deg ? ? 'ELECTRON MICROSCOPY' ? 0.606 1.696 1409 ? r_angle_other_deg ? ? 'ELECTRON MICROSCOPY' ? 8.606 5.000 98 ? r_dihedral_angle_1_deg ? ? 'ELECTRON MICROSCOPY' ? 1.146 5.000 1 ? r_dihedral_angle_2_deg ? ? 'ELECTRON MICROSCOPY' ? 13.146 10.000 98 ? r_dihedral_angle_3_deg ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_dihedral_angle_4_deg ? ? 'ELECTRON MICROSCOPY' ? 0.087 0.200 87 ? r_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.008 0.020 908 ? r_gen_planes_refined ? ? 'ELECTRON MICROSCOPY' ? 0.001 0.020 186 ? r_gen_planes_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_nbd_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_nbd_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_nbtor_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_nbtor_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_metal_ion_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_metal_ion_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_vdw_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_hbond_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'ELECTRON MICROSCOPY' ? 7.553 5.101 398 ? r_mcbond_it ? ? 'ELECTRON MICROSCOPY' ? 7.548 5.098 398 ? r_mcbond_other ? ? 'ELECTRON MICROSCOPY' ? 11.991 9.176 494 ? r_mcangle_it ? ? 'ELECTRON MICROSCOPY' ? 11.989 9.180 495 ? r_mcangle_other ? ? 'ELECTRON MICROSCOPY' ? 9.261 5.768 301 ? r_scbond_it ? ? 'ELECTRON MICROSCOPY' ? 9.250 5.762 301 ? r_scbond_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_scangle_it ? ? 'ELECTRON MICROSCOPY' ? 13.920 10.164 441 ? r_scangle_other ? ? 'ELECTRON MICROSCOPY' ? 19.657 46.33 627 ? r_long_range_B_refined ? ? 'ELECTRON MICROSCOPY' ? 19.643 46.48 628 ? r_long_range_B_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_rigid_bond_restr ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_sphericity_free ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_ls_shell.d_res_high 2.750 _refine_ls_shell.d_res_low 2.821 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 0 _refine_ls_shell.number_reflns_R_work 2823 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 1.143 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.000 # _struct.entry_id 9FOR _struct.title 'Structure of heteromeric amyloid filament of TDP-43 and AXNA11 from FTLD-TDP Type C (variant 1)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9FOR _struct_keywords.text ;TDP-43, ANXA11, amyloid, heteromeric amyloid, FTLD-TDP, FTLD-TDP Type C, neurodegeneration, neurodegenerative disease, dementia, brain, PROTEIN FIBRIL, filament ; _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 1 ? F N N 2 ? G N N 1 ? H N N 2 ? I N N 1 ? J N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP TADBP_HUMAN Q13148 ? 1 GNQGGFGNSRGGGAGLGNNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQN 284 2 UNP ANX11_HUMAN P50995 ? 2 LDNVATYAGQFNQDYLSGMAANMSGTFGGANMPNLY 39 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9FOR o 1 ? 62 ? Q13148 284 ? 345 ? 284 345 2 2 9FOR p 1 ? 36 ? P50995 39 ? 74 ? 39 74 3 1 9FOR A 1 ? 62 ? Q13148 284 ? 345 ? 284 345 4 2 9FOR B 1 ? 36 ? P50995 39 ? 74 ? 39 74 5 1 9FOR C 1 ? 62 ? Q13148 284 ? 345 ? 284 345 6 2 9FOR D 1 ? 36 ? P50995 39 ? 74 ? 39 74 7 1 9FOR E 1 ? 62 ? Q13148 284 ? 345 ? 284 345 8 2 9FOR F 1 ? 36 ? P50995 39 ? 74 ? 39 74 9 1 9FOR G 1 ? 62 ? Q13148 284 ? 345 ? 284 345 10 2 9FOR H 1 ? 36 ? P50995 39 ? 74 ? 39 74 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details decameric _pdbx_struct_assembly.oligomeric_count 10 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 5 ? AA3 ? 5 ? AA4 ? 5 ? AA5 ? 5 ? AA6 ? 5 ? AA7 ? 5 ? AA8 ? 5 ? AA9 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA3 1 2 ? parallel AA3 2 3 ? parallel AA3 3 4 ? parallel AA3 4 5 ? parallel AA4 1 2 ? parallel AA4 2 3 ? parallel AA4 3 4 ? parallel AA4 4 5 ? parallel AA5 1 2 ? parallel AA5 2 3 ? parallel AA5 3 4 ? parallel AA5 4 5 ? parallel AA6 1 2 ? parallel AA6 2 3 ? parallel AA6 3 4 ? parallel AA6 4 5 ? parallel AA7 1 2 ? parallel AA7 2 3 ? parallel AA7 3 4 ? parallel AA7 4 5 ? parallel AA8 1 2 ? parallel AA8 2 3 ? parallel AA8 3 4 ? parallel AA8 4 5 ? parallel AA9 1 2 ? parallel AA9 2 3 ? parallel AA9 3 4 ? parallel AA9 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE C 6 ? ARG C 10 ? PHE A 289 ARG A 293 AA1 2 PHE E 6 ? ARG E 10 ? PHE C 289 ARG C 293 AA1 3 PHE A 6 ? ARG A 10 ? PHE o 289 ARG o 293 AA1 4 PHE G 6 ? ARG G 10 ? PHE E 289 ARG E 293 AA1 5 PHE I 6 ? ARG I 10 ? PHE G 289 ARG G 293 AA2 1 ALA C 14 ? GLY C 15 ? ALA A 297 GLY A 298 AA2 2 ALA E 14 ? GLY E 15 ? ALA C 297 GLY C 298 AA2 3 ALA A 14 ? GLY A 15 ? ALA o 297 GLY o 298 AA2 4 ALA G 14 ? GLY G 15 ? ALA E 297 GLY E 298 AA2 5 ALA I 14 ? GLY I 15 ? ALA G 297 GLY G 298 AA3 1 MET C 28 ? ASN C 29 ? MET A 311 ASN A 312 AA3 2 MET E 28 ? ASN E 29 ? MET C 311 ASN C 312 AA3 3 MET A 28 ? ASN A 29 ? MET o 311 ASN o 312 AA3 4 MET G 28 ? ASN G 29 ? MET E 311 ASN E 312 AA3 5 MET I 28 ? ASN I 29 ? MET G 311 ASN G 312 AA4 1 SER C 34 ? ILE C 35 ? SER A 317 ILE A 318 AA4 2 SER E 34 ? ILE E 35 ? SER C 317 ILE C 318 AA4 3 SER A 34 ? ILE A 35 ? SER o 317 ILE o 318 AA4 4 SER G 34 ? ILE G 35 ? SER E 317 ILE E 318 AA4 5 SER I 34 ? ILE I 35 ? SER G 317 ILE G 318 AA5 1 ALA C 38 ? GLY C 55 ? ALA A 321 GLY A 338 AA5 2 ALA E 38 ? GLY E 55 ? ALA C 321 GLY C 338 AA5 3 ALA A 38 ? GLY A 55 ? ALA o 321 GLY o 338 AA5 4 ALA G 38 ? GLY G 55 ? ALA E 321 GLY E 338 AA5 5 ALA I 38 ? GLY I 55 ? ALA G 321 GLY G 338 AA6 1 ALA C 58 ? GLN C 61 ? ALA A 341 GLN A 344 AA6 2 ALA E 58 ? GLN E 61 ? ALA C 341 GLN C 344 AA6 3 ALA A 58 ? GLN A 61 ? ALA o 341 GLN o 344 AA6 4 ALA G 58 ? GLN G 61 ? ALA E 341 GLN E 344 AA6 5 ALA I 58 ? GLN I 61 ? ALA G 341 GLN G 344 AA7 1 ASP D 2 ? ASN D 12 ? ASP B 40 ASN B 50 AA7 2 ASP F 2 ? ASN F 12 ? ASP D 40 ASN D 50 AA7 3 ASP B 2 ? ASN B 12 ? ASP p 40 ASN p 50 AA7 4 ASP H 2 ? ASN H 12 ? ASP F 40 ASN F 50 AA7 5 ASP J 2 ? ASN J 12 ? ASP H 40 ASN H 50 AA8 1 MET D 19 ? PHE D 27 ? MET B 57 PHE B 65 AA8 2 MET F 19 ? PHE F 27 ? MET D 57 PHE D 65 AA8 3 MET B 19 ? PHE B 27 ? MET p 57 PHE p 65 AA8 4 MET H 19 ? PHE H 27 ? MET F 57 PHE F 65 AA8 5 MET J 19 ? PHE J 27 ? MET H 57 PHE H 65 AA9 1 ASN D 34 ? LEU D 35 ? ASN B 72 LEU B 73 AA9 2 ASN F 34 ? LEU F 35 ? ASN D 72 LEU D 73 AA9 3 ASN B 34 ? LEU B 35 ? ASN p 72 LEU p 73 AA9 4 ASN H 34 ? LEU H 35 ? ASN F 72 LEU F 73 AA9 5 ASN J 34 ? LEU J 35 ? ASN H 72 LEU H 73 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE C 6 ? N PHE A 289 O GLY E 7 ? O GLY C 290 AA1 2 3 O PHE E 6 ? O PHE C 289 N GLY A 7 ? N GLY o 290 AA1 3 4 N PHE A 6 ? N PHE o 289 O GLY G 7 ? O GLY E 290 AA1 4 5 N PHE G 6 ? N PHE E 289 O GLY I 7 ? O GLY G 290 AA2 1 2 N GLY C 15 ? N GLY A 298 O ALA E 14 ? O ALA C 297 AA2 2 3 O GLY E 15 ? O GLY C 298 N ALA A 14 ? N ALA o 297 AA2 3 4 N GLY A 15 ? N GLY o 298 O ALA G 14 ? O ALA E 297 AA2 4 5 N GLY G 15 ? N GLY E 298 O ALA I 14 ? O ALA G 297 AA3 1 2 N ASN C 29 ? N ASN A 312 O MET E 28 ? O MET C 311 AA3 2 3 O ASN E 29 ? O ASN C 312 N MET A 28 ? N MET o 311 AA3 3 4 N ASN A 29 ? N ASN o 312 O MET G 28 ? O MET E 311 AA3 4 5 N ASN G 29 ? N ASN E 312 O MET I 28 ? O MET G 311 AA4 1 2 N ILE C 35 ? N ILE A 318 O SER E 34 ? O SER C 317 AA4 2 3 O ILE E 35 ? O ILE C 318 N SER A 34 ? N SER o 317 AA4 3 4 N ILE A 35 ? N ILE o 318 O SER G 34 ? O SER E 317 AA4 4 5 N ILE G 35 ? N ILE E 318 O SER I 34 ? O SER G 317 AA5 1 2 N MET C 39 ? N MET A 322 O MET E 40 ? O MET C 323 AA5 2 3 O MET E 39 ? O MET C 322 N MET A 40 ? N MET o 323 AA5 3 4 N MET A 39 ? N MET o 322 O MET G 40 ? O MET E 323 AA5 4 5 N MET G 39 ? N MET E 322 O MET I 40 ? O MET G 323 AA6 1 2 N SER C 59 ? N SER A 342 O GLN E 60 ? O GLN C 343 AA6 2 3 O SER E 59 ? O SER C 342 N GLN A 60 ? N GLN o 343 AA6 3 4 N SER A 59 ? N SER o 342 O GLN G 60 ? O GLN E 343 AA6 4 5 N SER G 59 ? N SER E 342 O GLN I 60 ? O GLN G 343 AA7 1 2 N PHE D 11 ? N PHE B 49 O ASN F 12 ? O ASN D 50 AA7 2 3 O PHE F 11 ? O PHE D 49 N ASN B 12 ? N ASN p 50 AA7 3 4 N PHE B 11 ? N PHE p 49 O ASN H 12 ? O ASN F 50 AA7 4 5 N PHE H 11 ? N PHE F 49 O ASN J 12 ? O ASN H 50 AA8 1 2 N ASN D 22 ? N ASN B 60 O ALA F 21 ? O ALA D 59 AA8 2 3 O ASN F 22 ? O ASN D 60 N ALA B 21 ? N ALA p 59 AA8 3 4 N ASN B 22 ? N ASN p 60 O ALA H 21 ? O ALA F 59 AA8 4 5 N ASN H 22 ? N ASN F 60 O ALA J 21 ? O ALA H 59 AA9 1 2 N ASN D 34 ? N ASN B 72 O LEU F 35 ? O LEU D 73 AA9 2 3 O ASN F 34 ? O ASN D 72 N LEU B 35 ? N LEU p 73 AA9 3 4 N ASN B 34 ? N ASN p 72 O LEU H 35 ? O LEU F 73 AA9 4 5 N ASN H 34 ? N ASN F 72 O LEU J 35 ? O LEU H 73 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CG o MET 322 ? ? SD o MET 322 ? ? CE o MET 322 ? ? 110.61 100.20 10.41 1.60 N 2 1 CG o MET 337 ? ? SD o MET 337 ? ? CE o MET 337 ? ? 111.22 100.20 11.02 1.60 N 3 1 CG p MET 57 ? ? SD p MET 57 ? ? CE p MET 57 ? ? 110.84 100.20 10.64 1.60 N 4 1 CB p ASN 72 ? ? CA p ASN 72 ? ? C p ASN 72 ? ? 97.27 110.40 -13.13 2.00 N 5 1 CG A MET 322 ? ? SD A MET 322 ? ? CE A MET 322 ? ? 110.58 100.20 10.38 1.60 N 6 1 CG A MET 337 ? ? SD A MET 337 ? ? CE A MET 337 ? ? 111.22 100.20 11.02 1.60 N 7 1 CG B MET 57 ? ? SD B MET 57 ? ? CE B MET 57 ? ? 110.83 100.20 10.63 1.60 N 8 1 CB B ASN 72 ? ? CA B ASN 72 ? ? C B ASN 72 ? ? 97.28 110.40 -13.12 2.00 N 9 1 CG C MET 322 ? ? SD C MET 322 ? ? CE C MET 322 ? ? 110.61 100.20 10.41 1.60 N 10 1 CG C MET 337 ? ? SD C MET 337 ? ? CE C MET 337 ? ? 111.20 100.20 11.00 1.60 N 11 1 CG D MET 57 ? ? SD D MET 57 ? ? CE D MET 57 ? ? 110.84 100.20 10.64 1.60 N 12 1 CB D ASN 72 ? ? CA D ASN 72 ? ? C D ASN 72 ? ? 97.30 110.40 -13.10 2.00 N 13 1 CG E MET 322 ? ? SD E MET 322 ? ? CE E MET 322 ? ? 110.60 100.20 10.40 1.60 N 14 1 CG E MET 337 ? ? SD E MET 337 ? ? CE E MET 337 ? ? 111.21 100.20 11.01 1.60 N 15 1 CG F MET 57 ? ? SD F MET 57 ? ? CE F MET 57 ? ? 110.81 100.20 10.61 1.60 N 16 1 CB F ASN 72 ? ? CA F ASN 72 ? ? C F ASN 72 ? ? 97.27 110.40 -13.13 2.00 N 17 1 CG G MET 322 ? ? SD G MET 322 ? ? CE G MET 322 ? ? 110.60 100.20 10.40 1.60 N 18 1 CG G MET 337 ? ? SD G MET 337 ? ? CE G MET 337 ? ? 111.22 100.20 11.02 1.60 N 19 1 CG H MET 57 ? ? SD H MET 57 ? ? CE H MET 57 ? ? 110.82 100.20 10.62 1.60 N 20 1 CB H ASN 72 ? ? CA H ASN 72 ? ? C H ASN 72 ? ? 97.31 110.40 -13.09 2.00 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE o 316 ? ? 53.71 72.59 2 1 ASN o 319 ? ? -153.56 78.86 3 1 LEU o 340 ? ? 61.90 65.36 4 1 GLN p 48 ? ? 54.99 112.76 5 1 GLN p 51 ? ? -148.50 59.64 6 1 ALA p 68 ? ? -153.08 52.70 7 1 PHE A 316 ? ? 53.75 72.57 8 1 ASN A 319 ? ? -153.55 78.88 9 1 LEU A 340 ? ? 61.87 65.34 10 1 GLN B 48 ? ? 55.01 112.76 11 1 GLN B 51 ? ? -148.52 59.63 12 1 ALA B 68 ? ? -153.10 52.68 13 1 PHE C 316 ? ? 53.68 72.56 14 1 ASN C 319 ? ? -153.55 78.85 15 1 LEU C 340 ? ? 61.90 65.31 16 1 GLN D 48 ? ? 54.93 112.76 17 1 GLN D 51 ? ? -148.52 59.67 18 1 ALA D 68 ? ? -153.08 52.70 19 1 PHE E 316 ? ? 53.70 72.58 20 1 ASN E 319 ? ? -153.56 78.87 21 1 LEU E 340 ? ? 61.88 65.42 22 1 GLN F 48 ? ? 54.94 112.74 23 1 GLN F 51 ? ? -148.46 59.60 24 1 ALA F 68 ? ? -153.08 52.69 25 1 PHE G 316 ? ? 53.66 72.56 26 1 ASN G 319 ? ? -153.53 78.88 27 1 LEU G 340 ? ? 61.89 65.42 28 1 GLN H 48 ? ? 54.99 112.77 29 1 GLN H 51 ? ? -148.51 59.63 30 1 ALA H 68 ? ? -153.08 52.68 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9FOR _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9FOR _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.75 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 18020 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type HELICAL # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.4 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source NATURAL _em_entity_assembly.type TISSUE _em_entity_assembly.name 'Heteromeric amyloid filament of TDP-43 and AXNA11 from FTLD-TDP Type C (variant 1)' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2' # _em_imaging.entry_id 9FOR _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_defocus_max 2200 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 9FOR _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9FOR _em_experiment.id 1 _em_experiment.reconstruction_method HELICAL _em_experiment.aggregation_state FILAMENT _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLY N N N N 94 GLY CA C N N 95 GLY C C N N 96 GLY O O N N 97 GLY OXT O N N 98 GLY H H N N 99 GLY H2 H N N 100 GLY HA2 H N N 101 GLY HA3 H N N 102 GLY HXT H N N 103 ILE N N N N 104 ILE CA C N S 105 ILE C C N N 106 ILE O O N N 107 ILE CB C N S 108 ILE CG1 C N N 109 ILE CG2 C N N 110 ILE CD1 C N N 111 ILE OXT O N N 112 ILE H H N N 113 ILE H2 H N N 114 ILE HA H N N 115 ILE HB H N N 116 ILE HG12 H N N 117 ILE HG13 H N N 118 ILE HG21 H N N 119 ILE HG22 H N N 120 ILE HG23 H N N 121 ILE HD11 H N N 122 ILE HD12 H N N 123 ILE HD13 H N N 124 ILE HXT H N N 125 LEU N N N N 126 LEU CA C N S 127 LEU C C N N 128 LEU O O N N 129 LEU CB C N N 130 LEU CG C N N 131 LEU CD1 C N N 132 LEU CD2 C N N 133 LEU OXT O N N 134 LEU H H N N 135 LEU H2 H N N 136 LEU HA H N N 137 LEU HB2 H N N 138 LEU HB3 H N N 139 LEU HG H N N 140 LEU HD11 H N N 141 LEU HD12 H N N 142 LEU HD13 H N N 143 LEU HD21 H N N 144 LEU HD22 H N N 145 LEU HD23 H N N 146 LEU HXT H N N 147 MET N N N N 148 MET CA C N S 149 MET C C N N 150 MET O O N N 151 MET CB C N N 152 MET CG C N N 153 MET SD S N N 154 MET CE C N N 155 MET OXT O N N 156 MET H H N N 157 MET H2 H N N 158 MET HA H N N 159 MET HB2 H N N 160 MET HB3 H N N 161 MET HG2 H N N 162 MET HG3 H N N 163 MET HE1 H N N 164 MET HE2 H N N 165 MET HE3 H N N 166 MET HXT H N N 167 PHE N N N N 168 PHE CA C N S 169 PHE C C N N 170 PHE O O N N 171 PHE CB C N N 172 PHE CG C Y N 173 PHE CD1 C Y N 174 PHE CD2 C Y N 175 PHE CE1 C Y N 176 PHE CE2 C Y N 177 PHE CZ C Y N 178 PHE OXT O N N 179 PHE H H N N 180 PHE H2 H N N 181 PHE HA H N N 182 PHE HB2 H N N 183 PHE HB3 H N N 184 PHE HD1 H N N 185 PHE HD2 H N N 186 PHE HE1 H N N 187 PHE HE2 H N N 188 PHE HZ H N N 189 PHE HXT H N N 190 PRO N N N N 191 PRO CA C N S 192 PRO C C N N 193 PRO O O N N 194 PRO CB C N N 195 PRO CG C N N 196 PRO CD C N N 197 PRO OXT O N N 198 PRO H H N N 199 PRO HA H N N 200 PRO HB2 H N N 201 PRO HB3 H N N 202 PRO HG2 H N N 203 PRO HG3 H N N 204 PRO HD2 H N N 205 PRO HD3 H N N 206 PRO HXT H N N 207 SER N N N N 208 SER CA C N S 209 SER C C N N 210 SER O O N N 211 SER CB C N N 212 SER OG O N N 213 SER OXT O N N 214 SER H H N N 215 SER H2 H N N 216 SER HA H N N 217 SER HB2 H N N 218 SER HB3 H N N 219 SER HG H N N 220 SER HXT H N N 221 THR N N N N 222 THR CA C N S 223 THR C C N N 224 THR O O N N 225 THR CB C N R 226 THR OG1 O N N 227 THR CG2 C N N 228 THR OXT O N N 229 THR H H N N 230 THR H2 H N N 231 THR HA H N N 232 THR HB H N N 233 THR HG1 H N N 234 THR HG21 H N N 235 THR HG22 H N N 236 THR HG23 H N N 237 THR HXT H N N 238 TRP N N N N 239 TRP CA C N S 240 TRP C C N N 241 TRP O O N N 242 TRP CB C N N 243 TRP CG C Y N 244 TRP CD1 C Y N 245 TRP CD2 C Y N 246 TRP NE1 N Y N 247 TRP CE2 C Y N 248 TRP CE3 C Y N 249 TRP CZ2 C Y N 250 TRP CZ3 C Y N 251 TRP CH2 C Y N 252 TRP OXT O N N 253 TRP H H N N 254 TRP H2 H N N 255 TRP HA H N N 256 TRP HB2 H N N 257 TRP HB3 H N N 258 TRP HD1 H N N 259 TRP HE1 H N N 260 TRP HE3 H N N 261 TRP HZ2 H N N 262 TRP HZ3 H N N 263 TRP HH2 H N N 264 TRP HXT H N N 265 TYR N N N N 266 TYR CA C N S 267 TYR C C N N 268 TYR O O N N 269 TYR CB C N N 270 TYR CG C Y N 271 TYR CD1 C Y N 272 TYR CD2 C Y N 273 TYR CE1 C Y N 274 TYR CE2 C Y N 275 TYR CZ C Y N 276 TYR OH O N N 277 TYR OXT O N N 278 TYR H H N N 279 TYR H2 H N N 280 TYR HA H N N 281 TYR HB2 H N N 282 TYR HB3 H N N 283 TYR HD1 H N N 284 TYR HD2 H N N 285 TYR HE1 H N N 286 TYR HE2 H N N 287 TYR HH H N N 288 TYR HXT H N N 289 VAL N N N N 290 VAL CA C N S 291 VAL C C N N 292 VAL O O N N 293 VAL CB C N N 294 VAL CG1 C N N 295 VAL CG2 C N N 296 VAL OXT O N N 297 VAL H H N N 298 VAL H2 H N N 299 VAL HA H N N 300 VAL HB H N N 301 VAL HG11 H N N 302 VAL HG12 H N N 303 VAL HG13 H N N 304 VAL HG21 H N N 305 VAL HG22 H N N 306 VAL HG23 H N N 307 VAL HXT H N N 308 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLY N CA sing N N 89 GLY N H sing N N 90 GLY N H2 sing N N 91 GLY CA C sing N N 92 GLY CA HA2 sing N N 93 GLY CA HA3 sing N N 94 GLY C O doub N N 95 GLY C OXT sing N N 96 GLY OXT HXT sing N N 97 ILE N CA sing N N 98 ILE N H sing N N 99 ILE N H2 sing N N 100 ILE CA C sing N N 101 ILE CA CB sing N N 102 ILE CA HA sing N N 103 ILE C O doub N N 104 ILE C OXT sing N N 105 ILE CB CG1 sing N N 106 ILE CB CG2 sing N N 107 ILE CB HB sing N N 108 ILE CG1 CD1 sing N N 109 ILE CG1 HG12 sing N N 110 ILE CG1 HG13 sing N N 111 ILE CG2 HG21 sing N N 112 ILE CG2 HG22 sing N N 113 ILE CG2 HG23 sing N N 114 ILE CD1 HD11 sing N N 115 ILE CD1 HD12 sing N N 116 ILE CD1 HD13 sing N N 117 ILE OXT HXT sing N N 118 LEU N CA sing N N 119 LEU N H sing N N 120 LEU N H2 sing N N 121 LEU CA C sing N N 122 LEU CA CB sing N N 123 LEU CA HA sing N N 124 LEU C O doub N N 125 LEU C OXT sing N N 126 LEU CB CG sing N N 127 LEU CB HB2 sing N N 128 LEU CB HB3 sing N N 129 LEU CG CD1 sing N N 130 LEU CG CD2 sing N N 131 LEU CG HG sing N N 132 LEU CD1 HD11 sing N N 133 LEU CD1 HD12 sing N N 134 LEU CD1 HD13 sing N N 135 LEU CD2 HD21 sing N N 136 LEU CD2 HD22 sing N N 137 LEU CD2 HD23 sing N N 138 LEU OXT HXT sing N N 139 MET N CA sing N N 140 MET N H sing N N 141 MET N H2 sing N N 142 MET CA C sing N N 143 MET CA CB sing N N 144 MET CA HA sing N N 145 MET C O doub N N 146 MET C OXT sing N N 147 MET CB CG sing N N 148 MET CB HB2 sing N N 149 MET CB HB3 sing N N 150 MET CG SD sing N N 151 MET CG HG2 sing N N 152 MET CG HG3 sing N N 153 MET SD CE sing N N 154 MET CE HE1 sing N N 155 MET CE HE2 sing N N 156 MET CE HE3 sing N N 157 MET OXT HXT sing N N 158 PHE N CA sing N N 159 PHE N H sing N N 160 PHE N H2 sing N N 161 PHE CA C sing N N 162 PHE CA CB sing N N 163 PHE CA HA sing N N 164 PHE C O doub N N 165 PHE C OXT sing N N 166 PHE CB CG sing N N 167 PHE CB HB2 sing N N 168 PHE CB HB3 sing N N 169 PHE CG CD1 doub Y N 170 PHE CG CD2 sing Y N 171 PHE CD1 CE1 sing Y N 172 PHE CD1 HD1 sing N N 173 PHE CD2 CE2 doub Y N 174 PHE CD2 HD2 sing N N 175 PHE CE1 CZ doub Y N 176 PHE CE1 HE1 sing N N 177 PHE CE2 CZ sing Y N 178 PHE CE2 HE2 sing N N 179 PHE CZ HZ sing N N 180 PHE OXT HXT sing N N 181 PRO N CA sing N N 182 PRO N CD sing N N 183 PRO N H sing N N 184 PRO CA C sing N N 185 PRO CA CB sing N N 186 PRO CA HA sing N N 187 PRO C O doub N N 188 PRO C OXT sing N N 189 PRO CB CG sing N N 190 PRO CB HB2 sing N N 191 PRO CB HB3 sing N N 192 PRO CG CD sing N N 193 PRO CG HG2 sing N N 194 PRO CG HG3 sing N N 195 PRO CD HD2 sing N N 196 PRO CD HD3 sing N N 197 PRO OXT HXT sing N N 198 SER N CA sing N N 199 SER N H sing N N 200 SER N H2 sing N N 201 SER CA C sing N N 202 SER CA CB sing N N 203 SER CA HA sing N N 204 SER C O doub N N 205 SER C OXT sing N N 206 SER CB OG sing N N 207 SER CB HB2 sing N N 208 SER CB HB3 sing N N 209 SER OG HG sing N N 210 SER OXT HXT sing N N 211 THR N CA sing N N 212 THR N H sing N N 213 THR N H2 sing N N 214 THR CA C sing N N 215 THR CA CB sing N N 216 THR CA HA sing N N 217 THR C O doub N N 218 THR C OXT sing N N 219 THR CB OG1 sing N N 220 THR CB CG2 sing N N 221 THR CB HB sing N N 222 THR OG1 HG1 sing N N 223 THR CG2 HG21 sing N N 224 THR CG2 HG22 sing N N 225 THR CG2 HG23 sing N N 226 THR OXT HXT sing N N 227 TRP N CA sing N N 228 TRP N H sing N N 229 TRP N H2 sing N N 230 TRP CA C sing N N 231 TRP CA CB sing N N 232 TRP CA HA sing N N 233 TRP C O doub N N 234 TRP C OXT sing N N 235 TRP CB CG sing N N 236 TRP CB HB2 sing N N 237 TRP CB HB3 sing N N 238 TRP CG CD1 doub Y N 239 TRP CG CD2 sing Y N 240 TRP CD1 NE1 sing Y N 241 TRP CD1 HD1 sing N N 242 TRP CD2 CE2 doub Y N 243 TRP CD2 CE3 sing Y N 244 TRP NE1 CE2 sing Y N 245 TRP NE1 HE1 sing N N 246 TRP CE2 CZ2 sing Y N 247 TRP CE3 CZ3 doub Y N 248 TRP CE3 HE3 sing N N 249 TRP CZ2 CH2 doub Y N 250 TRP CZ2 HZ2 sing N N 251 TRP CZ3 CH2 sing Y N 252 TRP CZ3 HZ3 sing N N 253 TRP CH2 HH2 sing N N 254 TRP OXT HXT sing N N 255 TYR N CA sing N N 256 TYR N H sing N N 257 TYR N H2 sing N N 258 TYR CA C sing N N 259 TYR CA CB sing N N 260 TYR CA HA sing N N 261 TYR C O doub N N 262 TYR C OXT sing N N 263 TYR CB CG sing N N 264 TYR CB HB2 sing N N 265 TYR CB HB3 sing N N 266 TYR CG CD1 doub Y N 267 TYR CG CD2 sing Y N 268 TYR CD1 CE1 sing Y N 269 TYR CD1 HD1 sing N N 270 TYR CD2 CE2 doub Y N 271 TYR CD2 HD2 sing N N 272 TYR CE1 CZ doub Y N 273 TYR CE1 HE1 sing N N 274 TYR CE2 CZ sing Y N 275 TYR CE2 HE2 sing N N 276 TYR CZ OH sing N N 277 TYR OH HH sing N N 278 TYR OXT HXT sing N N 279 VAL N CA sing N N 280 VAL N H sing N N 281 VAL N H2 sing N N 282 VAL CA C sing N N 283 VAL CA CB sing N N 284 VAL CA HA sing N N 285 VAL C O doub N N 286 VAL C OXT sing N N 287 VAL CB CG1 sing N N 288 VAL CB CG2 sing N N 289 VAL CB HB sing N N 290 VAL CG1 HG11 sing N N 291 VAL CG1 HG12 sing N N 292 VAL CG1 HG13 sing N N 293 VAL CG2 HG21 sing N N 294 VAL CG2 HG22 sing N N 295 VAL CG2 HG23 sing N N 296 VAL OXT HXT sing N N 297 # _em_admin.current_status REL _em_admin.deposition_date 2024-06-12 _em_admin.deposition_site PDBE _em_admin.entry_id 9FOR _em_admin.last_update 2024-07-24 _em_admin.map_release_date 2024-07-24 _em_admin.title 'Structure of heteromeric amyloid filament of TDP-43 and AXNA11 from FTLD-TDP Type C (variant 1)' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units KILODALTONS/NANOMETER _em_entity_assembly_molwt.value 9.8 # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue Brain _em_entity_assembly_naturalsource.details ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.details ? _em_helical_entity.axial_symmetry C1 _em_helical_entity.angular_rotation_per_subunit -1.83 _em_helical_entity.axial_rise_per_subunit 4.98 # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 38 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? RELION 5 # _em_specimen.concentration ? _em_specimen.details 'Heteromeric amyloid filament of TDP-43 and AXNA11 from FTLD-TDP Type C (variant 1)' _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Medical Research Council (MRC, United Kingdom)' _pdbx_audit_support.country 'United Kingdom' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 9FOR _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_