data_9DDR # _entry.id 9DDR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9DDR pdb_00009ddr 10.2210/pdb9ddr/pdb WWPDB D_1000287912 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-07-09 ? 2 'Structure model' 1 1 2025-07-16 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.page_last' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9DDR _pdbx_database_status.recvd_initial_deposition_date 2024-08-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email todd-washington@uiowa.edu _pdbx_contact_author.name_first Michael _pdbx_contact_author.name_last Washington _pdbx_contact_author.name_mi T _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-8680-2992 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Frevert, Z.' 1 0000-0002-2939-9196 'Reusch, D.' 2 ? 'Freudenthal, B.' 3 0000-0003-1449-4710 'Washington, M.T.' 4 0000-0001-8680-2992 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_patent _citation.unpublished_flag ? ? ? ? ? ? ? UK ? ? primary 'Nat Commun' ? ? 2041-1723 ? ? 16 ? 5979 5979 'Visualizing DNA polymerase iota catalyze Hoogsteen-directed DNA synthesis.' 2025 ? 10.1038/s41467-025-61245-8 40593703 ? ? ? ? ? ? ? ? ? ? ? ? 1 'Acta Crystallogr D Struct Biol' ? ? 2059-7983 ? ? 75 ? 861 877 'Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix.' 2019 ? 10.1107/S2059798319011471 31588918 ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Frevert, Z.' 1 ? primary 'Reusch, D.T.' 2 ? primary 'Gildenberg, M.S.' 3 ? primary 'Jordan, S.M.' 4 ? primary 'Ryan, B.J.' 5 ? primary 'Freudenthal, B.D.' 6 ? primary 'Washington, M.T.' 7 ? 1 'Liebschner, D.' 8 0000-0003-3921-3209 1 'Afonine, P.V.' 9 0000-0002-5052-991X 1 'Baker, M.L.' 10 ? 1 'Bunkoczi, G.' 11 ? 1 'Chen, V.B.' 12 ? 1 'Croll, T.I.' 13 ? 1 'Hintze, B.' 14 0000-0002-4871-2096 1 'Hung, L.W.' 15 0000-0001-6690-8458 1 'Jain, S.' 16 ? 1 'McCoy, A.J.' 17 ? 1 'Moriarty, N.W.' 18 0000-0001-8857-9464 1 'Oeffner, R.D.' 19 0000-0003-3107-2202 1 'Poon, B.K.' 20 0000-0001-9633-6067 1 'Prisant, M.G.' 21 ? 1 'Read, R.J.' 22 0000-0001-8273-0047 1 'Richardson, J.S.' 23 ? 1 'Richardson, D.C.' 24 ? 1 'Sammito, M.D.' 25 ? 1 'Sobolev, O.V.' 26 0000-0002-0623-3214 1 'Stockwell, D.H.' 27 ? 1 'Terwilliger, T.C.' 28 0000-0001-6384-0320 1 'Urzhumtsev, A.G.' 29 ? 1 'Videau, L.L.' 30 ? 1 'Williams, C.J.' 31 ? 1 'Adams, P.D.' 32 0000-0001-9333-8219 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase iota' 47027.344 1 2.7.7.7 ? ? 'Polymerase Iota catalytic core' 2 polymer syn ;DNA (5'-D(P*AP*AP*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3') ; 5501.568 1 ? ? ? 'self-annealing DNA' 3 non-polymer syn "THYMIDINE-5'-TRIPHOSPHATE" 482.168 1 ? ? ? ? 4 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 5 water nat water 18.015 144 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Eta2,RAD30 homolog B' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMN VRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNN QSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIP GIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNK IEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMP FHLTLLSVCFCNLKALNTAK ; ;MELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMN VRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNN QSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIP GIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNK IEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMP FHLTLLSVCFCNLKALNTAK ; A ? 2 polydeoxyribonucleotide no no '(DT)(DC)(DA)(DA)(DG)(DG)(DG)(DT)(DC)(DC)(DT)(DA)(DG)(DG)(DA)(DC)(DC)(DC)' TCAAGGGTCCTAGGACCC B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 "THYMIDINE-5'-TRIPHOSPHATE" TTP 4 'CALCIUM ION' CA 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 LEU n 1 4 ALA n 1 5 ASP n 1 6 VAL n 1 7 GLY n 1 8 ALA n 1 9 ALA n 1 10 ALA n 1 11 SER n 1 12 SER n 1 13 GLN n 1 14 GLY n 1 15 VAL n 1 16 HIS n 1 17 ASP n 1 18 GLN n 1 19 VAL n 1 20 LEU n 1 21 PRO n 1 22 THR n 1 23 PRO n 1 24 ASN n 1 25 ALA n 1 26 SER n 1 27 SER n 1 28 ARG n 1 29 VAL n 1 30 ILE n 1 31 VAL n 1 32 HIS n 1 33 VAL n 1 34 ASP n 1 35 LEU n 1 36 ASP n 1 37 CYS n 1 38 PHE n 1 39 TYR n 1 40 ALA n 1 41 GLN n 1 42 VAL n 1 43 GLU n 1 44 MET n 1 45 ILE n 1 46 SER n 1 47 ASN n 1 48 PRO n 1 49 GLU n 1 50 LEU n 1 51 LYS n 1 52 ASP n 1 53 LYS n 1 54 PRO n 1 55 LEU n 1 56 GLY n 1 57 VAL n 1 58 GLN n 1 59 GLN n 1 60 LYS n 1 61 TYR n 1 62 LEU n 1 63 VAL n 1 64 VAL n 1 65 THR n 1 66 CYS n 1 67 ASN n 1 68 TYR n 1 69 GLU n 1 70 ALA n 1 71 ARG n 1 72 LYS n 1 73 LEU n 1 74 GLY n 1 75 VAL n 1 76 LYS n 1 77 LYS n 1 78 LEU n 1 79 MET n 1 80 ASN n 1 81 VAL n 1 82 ARG n 1 83 ASP n 1 84 ALA n 1 85 LYS n 1 86 GLU n 1 87 LYS n 1 88 CYS n 1 89 PRO n 1 90 GLN n 1 91 LEU n 1 92 VAL n 1 93 LEU n 1 94 VAL n 1 95 ASN n 1 96 GLY n 1 97 GLU n 1 98 ASP n 1 99 LEU n 1 100 THR n 1 101 ARG n 1 102 TYR n 1 103 ARG n 1 104 GLU n 1 105 MET n 1 106 SER n 1 107 TYR n 1 108 LYS n 1 109 VAL n 1 110 THR n 1 111 GLU n 1 112 LEU n 1 113 LEU n 1 114 GLU n 1 115 GLU n 1 116 PHE n 1 117 SER n 1 118 PRO n 1 119 VAL n 1 120 VAL n 1 121 GLU n 1 122 ARG n 1 123 LEU n 1 124 GLY n 1 125 PHE n 1 126 ASP n 1 127 GLU n 1 128 ASN n 1 129 PHE n 1 130 VAL n 1 131 ASP n 1 132 LEU n 1 133 THR n 1 134 GLU n 1 135 MET n 1 136 VAL n 1 137 GLU n 1 138 LYS n 1 139 ARG n 1 140 LEU n 1 141 GLN n 1 142 GLN n 1 143 LEU n 1 144 GLN n 1 145 SER n 1 146 ASP n 1 147 GLU n 1 148 LEU n 1 149 SER n 1 150 ALA n 1 151 VAL n 1 152 THR n 1 153 VAL n 1 154 SER n 1 155 GLY n 1 156 HIS n 1 157 VAL n 1 158 TYR n 1 159 ASN n 1 160 ASN n 1 161 GLN n 1 162 SER n 1 163 ILE n 1 164 ASN n 1 165 LEU n 1 166 LEU n 1 167 ASP n 1 168 VAL n 1 169 LEU n 1 170 HIS n 1 171 ILE n 1 172 ARG n 1 173 LEU n 1 174 LEU n 1 175 VAL n 1 176 GLY n 1 177 SER n 1 178 GLN n 1 179 ILE n 1 180 ALA n 1 181 ALA n 1 182 GLU n 1 183 MET n 1 184 ARG n 1 185 GLU n 1 186 ALA n 1 187 MET n 1 188 TYR n 1 189 ASN n 1 190 GLN n 1 191 LEU n 1 192 GLY n 1 193 LEU n 1 194 THR n 1 195 GLY n 1 196 CYS n 1 197 ALA n 1 198 GLY n 1 199 VAL n 1 200 ALA n 1 201 SER n 1 202 ASN n 1 203 LYS n 1 204 LEU n 1 205 LEU n 1 206 ALA n 1 207 LYS n 1 208 LEU n 1 209 VAL n 1 210 SER n 1 211 GLY n 1 212 VAL n 1 213 PHE n 1 214 LYS n 1 215 PRO n 1 216 ASN n 1 217 GLN n 1 218 GLN n 1 219 THR n 1 220 VAL n 1 221 LEU n 1 222 LEU n 1 223 PRO n 1 224 GLU n 1 225 SER n 1 226 CYS n 1 227 GLN n 1 228 HIS n 1 229 LEU n 1 230 ILE n 1 231 HIS n 1 232 SER n 1 233 LEU n 1 234 ASN n 1 235 HIS n 1 236 ILE n 1 237 LYS n 1 238 GLU n 1 239 ILE n 1 240 PRO n 1 241 GLY n 1 242 ILE n 1 243 GLY n 1 244 TYR n 1 245 LYS n 1 246 THR n 1 247 ALA n 1 248 LYS n 1 249 CYS n 1 250 LEU n 1 251 GLU n 1 252 ALA n 1 253 LEU n 1 254 GLY n 1 255 ILE n 1 256 ASN n 1 257 SER n 1 258 VAL n 1 259 ARG n 1 260 ASP n 1 261 LEU n 1 262 GLN n 1 263 THR n 1 264 PHE n 1 265 SER n 1 266 PRO n 1 267 LYS n 1 268 ILE n 1 269 LEU n 1 270 GLU n 1 271 LYS n 1 272 GLU n 1 273 LEU n 1 274 GLY n 1 275 ILE n 1 276 SER n 1 277 VAL n 1 278 ALA n 1 279 GLN n 1 280 ARG n 1 281 ILE n 1 282 GLN n 1 283 LYS n 1 284 LEU n 1 285 SER n 1 286 PHE n 1 287 GLY n 1 288 GLU n 1 289 ASP n 1 290 ASN n 1 291 SER n 1 292 PRO n 1 293 VAL n 1 294 ILE n 1 295 LEU n 1 296 SER n 1 297 GLY n 1 298 PRO n 1 299 PRO n 1 300 GLN n 1 301 SER n 1 302 PHE n 1 303 SER n 1 304 GLU n 1 305 GLU n 1 306 ASP n 1 307 SER n 1 308 PHE n 1 309 LYS n 1 310 LYS n 1 311 CYS n 1 312 SER n 1 313 SER n 1 314 GLU n 1 315 VAL n 1 316 GLU n 1 317 ALA n 1 318 LYS n 1 319 ASN n 1 320 LYS n 1 321 ILE n 1 322 GLU n 1 323 GLU n 1 324 LEU n 1 325 LEU n 1 326 ALA n 1 327 SER n 1 328 LEU n 1 329 LEU n 1 330 ASN n 1 331 ARG n 1 332 VAL n 1 333 CYS n 1 334 GLN n 1 335 ASP n 1 336 GLY n 1 337 ARG n 1 338 LYS n 1 339 PRO n 1 340 HIS n 1 341 THR n 1 342 VAL n 1 343 ARG n 1 344 LEU n 1 345 ILE n 1 346 ILE n 1 347 ARG n 1 348 ARG n 1 349 TYR n 1 350 SER n 1 351 SER n 1 352 GLU n 1 353 LYS n 1 354 HIS n 1 355 TYR n 1 356 GLY n 1 357 ARG n 1 358 GLU n 1 359 SER n 1 360 ARG n 1 361 GLN n 1 362 CYS n 1 363 PRO n 1 364 ILE n 1 365 PRO n 1 366 SER n 1 367 HIS n 1 368 VAL n 1 369 ILE n 1 370 GLN n 1 371 LYS n 1 372 LEU n 1 373 GLY n 1 374 THR n 1 375 GLY n 1 376 ASN n 1 377 TYR n 1 378 ASP n 1 379 VAL n 1 380 MET n 1 381 THR n 1 382 PRO n 1 383 MET n 1 384 VAL n 1 385 ASP n 1 386 ILE n 1 387 LEU n 1 388 MET n 1 389 LYS n 1 390 LEU n 1 391 PHE n 1 392 ARG n 1 393 ASN n 1 394 MET n 1 395 VAL n 1 396 ASN n 1 397 VAL n 1 398 LYS n 1 399 MET n 1 400 PRO n 1 401 PHE n 1 402 HIS n 1 403 LEU n 1 404 THR n 1 405 LEU n 1 406 LEU n 1 407 SER n 1 408 VAL n 1 409 CYS n 1 410 PHE n 1 411 CYS n 1 412 ASN n 1 413 LEU n 1 414 LYS n 1 415 ALA n 1 416 LEU n 1 417 ASN n 1 418 THR n 1 419 ALA n 1 420 LYS n 2 1 DT n 2 2 DC n 2 3 DA n 2 4 DA n 2 5 DG n 2 6 DG n 2 7 DG n 2 8 DT n 2 9 DC n 2 10 DC n 2 11 DT n 2 12 DA n 2 13 DG n 2 14 DG n 2 15 DA n 2 16 DC n 2 17 DC n 2 18 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 420 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'POLI, RAD30B' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 18 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TTP non-polymer . "THYMIDINE-5'-TRIPHOSPHATE" ? 'C10 H17 N2 O14 P3' 482.168 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLU 2 2 ? ? ? A . n A 1 3 LEU 3 3 ? ? ? A . n A 1 4 ALA 4 4 ? ? ? A . n A 1 5 ASP 5 5 ? ? ? A . n A 1 6 VAL 6 6 ? ? ? A . n A 1 7 GLY 7 7 ? ? ? A . n A 1 8 ALA 8 8 ? ? ? A . n A 1 9 ALA 9 9 ? ? ? A . n A 1 10 ALA 10 10 ? ? ? A . n A 1 11 SER 11 11 ? ? ? A . n A 1 12 SER 12 12 ? ? ? A . n A 1 13 GLN 13 13 ? ? ? A . n A 1 14 GLY 14 14 ? ? ? A . n A 1 15 VAL 15 15 ? ? ? A . n A 1 16 HIS 16 16 ? ? ? A . n A 1 17 ASP 17 17 ? ? ? A . n A 1 18 GLN 18 18 ? ? ? A . n A 1 19 VAL 19 19 ? ? ? A . n A 1 20 LEU 20 20 ? ? ? A . n A 1 21 PRO 21 21 ? ? ? A . n A 1 22 THR 22 22 ? ? ? A . n A 1 23 PRO 23 23 ? ? ? A . n A 1 24 ASN 24 24 ? ? ? A . n A 1 25 ALA 25 25 ? ? ? A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 HIS 32 32 32 HIS HIS A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 CYS 37 37 37 CYS CYS A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 MET 44 44 44 MET MET A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 ASN 47 47 47 ASN ASN A . n A 1 48 PRO 48 48 48 PRO PRO A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 PRO 54 54 54 PRO PRO A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 GLN 59 59 59 GLN GLN A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 TYR 61 61 61 TYR TYR A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 CYS 66 66 66 CYS CYS A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 TYR 68 68 68 TYR TYR A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 MET 79 79 79 MET MET A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 CYS 88 88 88 CYS CYS A . n A 1 89 PRO 89 89 89 PRO PRO A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 THR 100 100 100 THR THR A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 TYR 102 102 102 TYR TYR A . n A 1 103 ARG 103 103 103 ARG ARG A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 MET 105 105 105 MET MET A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 TYR 107 107 107 TYR TYR A . n A 1 108 LYS 108 108 108 LYS LYS A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 THR 110 110 110 THR THR A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 PHE 116 116 116 PHE PHE A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 PRO 118 118 118 PRO PRO A . n A 1 119 VAL 119 119 119 VAL VAL A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 ARG 122 122 122 ARG ARG A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 ASP 126 126 126 ASP ASP A . n A 1 127 GLU 127 127 127 GLU GLU A . n A 1 128 ASN 128 128 128 ASN ASN A . n A 1 129 PHE 129 129 129 PHE PHE A . n A 1 130 VAL 130 130 130 VAL VAL A . n A 1 131 ASP 131 131 131 ASP ASP A . n A 1 132 LEU 132 132 132 LEU LEU A . n A 1 133 THR 133 133 133 THR THR A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 MET 135 135 135 MET MET A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 GLU 137 137 137 GLU GLU A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 ARG 139 139 139 ARG ARG A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 GLN 141 141 141 GLN GLN A . n A 1 142 GLN 142 142 142 GLN GLN A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 GLN 144 144 144 GLN GLN A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 ASP 146 146 146 ASP ASP A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 SER 149 149 149 SER SER A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 VAL 151 151 151 VAL VAL A . n A 1 152 THR 152 152 152 THR THR A . n A 1 153 VAL 153 153 153 VAL VAL A . n A 1 154 SER 154 154 154 SER SER A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 HIS 156 156 156 HIS HIS A . n A 1 157 VAL 157 157 157 VAL VAL A . n A 1 158 TYR 158 158 158 TYR TYR A . n A 1 159 ASN 159 159 159 ASN ASN A . n A 1 160 ASN 160 160 160 ASN ASN A . n A 1 161 GLN 161 161 161 GLN GLN A . n A 1 162 SER 162 162 162 SER SER A . n A 1 163 ILE 163 163 163 ILE ILE A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 LEU 166 166 166 LEU LEU A . n A 1 167 ASP 167 167 167 ASP ASP A . n A 1 168 VAL 168 168 168 VAL VAL A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 HIS 170 170 170 HIS HIS A . n A 1 171 ILE 171 171 171 ILE ILE A . n A 1 172 ARG 172 172 172 ARG ARG A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 VAL 175 175 175 VAL VAL A . n A 1 176 GLY 176 176 176 GLY GLY A . n A 1 177 SER 177 177 177 SER SER A . n A 1 178 GLN 178 178 178 GLN GLN A . n A 1 179 ILE 179 179 179 ILE ILE A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 ALA 181 181 181 ALA ALA A . n A 1 182 GLU 182 182 182 GLU GLU A . n A 1 183 MET 183 183 183 MET MET A . n A 1 184 ARG 184 184 184 ARG ARG A . n A 1 185 GLU 185 185 185 GLU GLU A . n A 1 186 ALA 186 186 186 ALA ALA A . n A 1 187 MET 187 187 187 MET MET A . n A 1 188 TYR 188 188 188 TYR TYR A . n A 1 189 ASN 189 189 189 ASN ASN A . n A 1 190 GLN 190 190 190 GLN GLN A . n A 1 191 LEU 191 191 191 LEU LEU A . n A 1 192 GLY 192 192 192 GLY GLY A . n A 1 193 LEU 193 193 193 LEU LEU A . n A 1 194 THR 194 194 194 THR THR A . n A 1 195 GLY 195 195 195 GLY GLY A . n A 1 196 CYS 196 196 196 CYS CYS A . n A 1 197 ALA 197 197 197 ALA ALA A . n A 1 198 GLY 198 198 198 GLY GLY A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 ALA 200 200 200 ALA ALA A . n A 1 201 SER 201 201 201 SER SER A . n A 1 202 ASN 202 202 202 ASN ASN A . n A 1 203 LYS 203 203 203 LYS LYS A . n A 1 204 LEU 204 204 204 LEU LEU A . n A 1 205 LEU 205 205 205 LEU LEU A . n A 1 206 ALA 206 206 206 ALA ALA A . n A 1 207 LYS 207 207 207 LYS LYS A . n A 1 208 LEU 208 208 208 LEU LEU A . n A 1 209 VAL 209 209 209 VAL VAL A . n A 1 210 SER 210 210 210 SER SER A . n A 1 211 GLY 211 211 211 GLY GLY A . n A 1 212 VAL 212 212 212 VAL VAL A . n A 1 213 PHE 213 213 213 PHE PHE A . n A 1 214 LYS 214 214 214 LYS LYS A . n A 1 215 PRO 215 215 215 PRO PRO A . n A 1 216 ASN 216 216 216 ASN ASN A . n A 1 217 GLN 217 217 217 GLN GLN A . n A 1 218 GLN 218 218 218 GLN GLN A . n A 1 219 THR 219 219 219 THR THR A . n A 1 220 VAL 220 220 220 VAL VAL A . n A 1 221 LEU 221 221 221 LEU LEU A . n A 1 222 LEU 222 222 222 LEU LEU A . n A 1 223 PRO 223 223 223 PRO PRO A . n A 1 224 GLU 224 224 224 GLU GLU A . n A 1 225 SER 225 225 225 SER SER A . n A 1 226 CYS 226 226 226 CYS CYS A . n A 1 227 GLN 227 227 227 GLN GLN A . n A 1 228 HIS 228 228 228 HIS HIS A . n A 1 229 LEU 229 229 229 LEU LEU A . n A 1 230 ILE 230 230 230 ILE ILE A . n A 1 231 HIS 231 231 231 HIS HIS A . n A 1 232 SER 232 232 232 SER SER A . n A 1 233 LEU 233 233 233 LEU LEU A . n A 1 234 ASN 234 234 234 ASN ASN A . n A 1 235 HIS 235 235 235 HIS HIS A . n A 1 236 ILE 236 236 236 ILE ILE A . n A 1 237 LYS 237 237 237 LYS LYS A . n A 1 238 GLU 238 238 238 GLU GLU A . n A 1 239 ILE 239 239 239 ILE ILE A . n A 1 240 PRO 240 240 240 PRO PRO A . n A 1 241 GLY 241 241 241 GLY GLY A . n A 1 242 ILE 242 242 242 ILE ILE A . n A 1 243 GLY 243 243 243 GLY GLY A . n A 1 244 TYR 244 244 244 TYR TYR A . n A 1 245 LYS 245 245 245 LYS LYS A . n A 1 246 THR 246 246 246 THR THR A . n A 1 247 ALA 247 247 247 ALA ALA A . n A 1 248 LYS 248 248 248 LYS LYS A . n A 1 249 CYS 249 249 249 CYS CYS A . n A 1 250 LEU 250 250 250 LEU LEU A . n A 1 251 GLU 251 251 251 GLU GLU A . n A 1 252 ALA 252 252 252 ALA ALA A . n A 1 253 LEU 253 253 253 LEU LEU A . n A 1 254 GLY 254 254 254 GLY GLY A . n A 1 255 ILE 255 255 255 ILE ILE A . n A 1 256 ASN 256 256 256 ASN ASN A . n A 1 257 SER 257 257 257 SER SER A . n A 1 258 VAL 258 258 258 VAL VAL A . n A 1 259 ARG 259 259 259 ARG ARG A . n A 1 260 ASP 260 260 260 ASP ASP A . n A 1 261 LEU 261 261 261 LEU LEU A . n A 1 262 GLN 262 262 262 GLN GLN A . n A 1 263 THR 263 263 263 THR THR A . n A 1 264 PHE 264 264 264 PHE PHE A . n A 1 265 SER 265 265 265 SER SER A . n A 1 266 PRO 266 266 266 PRO PRO A . n A 1 267 LYS 267 267 267 LYS LYS A . n A 1 268 ILE 268 268 268 ILE ILE A . n A 1 269 LEU 269 269 269 LEU LEU A . n A 1 270 GLU 270 270 270 GLU GLU A . n A 1 271 LYS 271 271 271 LYS LYS A . n A 1 272 GLU 272 272 272 GLU GLU A . n A 1 273 LEU 273 273 273 LEU LEU A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 ILE 275 275 275 ILE ILE A . n A 1 276 SER 276 276 276 SER SER A . n A 1 277 VAL 277 277 277 VAL VAL A . n A 1 278 ALA 278 278 278 ALA ALA A . n A 1 279 GLN 279 279 279 GLN GLN A . n A 1 280 ARG 280 280 280 ARG ARG A . n A 1 281 ILE 281 281 281 ILE ILE A . n A 1 282 GLN 282 282 282 GLN GLN A . n A 1 283 LYS 283 283 283 LYS LYS A . n A 1 284 LEU 284 284 284 LEU LEU A . n A 1 285 SER 285 285 285 SER SER A . n A 1 286 PHE 286 286 286 PHE PHE A . n A 1 287 GLY 287 287 287 GLY GLY A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 ASP 289 289 289 ASP ASP A . n A 1 290 ASN 290 290 290 ASN ASN A . n A 1 291 SER 291 291 291 SER SER A . n A 1 292 PRO 292 292 292 PRO PRO A . n A 1 293 VAL 293 293 293 VAL VAL A . n A 1 294 ILE 294 294 294 ILE ILE A . n A 1 295 LEU 295 295 295 LEU LEU A . n A 1 296 SER 296 296 296 SER SER A . n A 1 297 GLY 297 297 297 GLY GLY A . n A 1 298 PRO 298 298 298 PRO PRO A . n A 1 299 PRO 299 299 299 PRO PRO A . n A 1 300 GLN 300 300 300 GLN GLN A . n A 1 301 SER 301 301 301 SER SER A . n A 1 302 PHE 302 302 302 PHE PHE A . n A 1 303 SER 303 303 303 SER SER A . n A 1 304 GLU 304 304 304 GLU GLU A . n A 1 305 GLU 305 305 305 GLU GLU A . n A 1 306 ASP 306 306 306 ASP ASP A . n A 1 307 SER 307 307 307 SER SER A . n A 1 308 PHE 308 308 308 PHE PHE A . n A 1 309 LYS 309 309 309 LYS LYS A . n A 1 310 LYS 310 310 310 LYS LYS A . n A 1 311 CYS 311 311 311 CYS CYS A . n A 1 312 SER 312 312 312 SER SER A . n A 1 313 SER 313 313 313 SER SER A . n A 1 314 GLU 314 314 314 GLU GLU A . n A 1 315 VAL 315 315 315 VAL VAL A . n A 1 316 GLU 316 316 316 GLU GLU A . n A 1 317 ALA 317 317 317 ALA ALA A . n A 1 318 LYS 318 318 318 LYS LYS A . n A 1 319 ASN 319 319 319 ASN ASN A . n A 1 320 LYS 320 320 320 LYS LYS A . n A 1 321 ILE 321 321 321 ILE ILE A . n A 1 322 GLU 322 322 322 GLU GLU A . n A 1 323 GLU 323 323 323 GLU GLU A . n A 1 324 LEU 324 324 324 LEU LEU A . n A 1 325 LEU 325 325 325 LEU LEU A . n A 1 326 ALA 326 326 326 ALA ALA A . n A 1 327 SER 327 327 327 SER SER A . n A 1 328 LEU 328 328 328 LEU LEU A . n A 1 329 LEU 329 329 329 LEU LEU A . n A 1 330 ASN 330 330 330 ASN ASN A . n A 1 331 ARG 331 331 331 ARG ARG A . n A 1 332 VAL 332 332 332 VAL VAL A . n A 1 333 CYS 333 333 333 CYS CYS A . n A 1 334 GLN 334 334 334 GLN GLN A . n A 1 335 ASP 335 335 335 ASP ASP A . n A 1 336 GLY 336 336 336 GLY GLY A . n A 1 337 ARG 337 337 337 ARG ARG A . n A 1 338 LYS 338 338 338 LYS LYS A . n A 1 339 PRO 339 339 339 PRO PRO A . n A 1 340 HIS 340 340 340 HIS HIS A . n A 1 341 THR 341 341 341 THR THR A . n A 1 342 VAL 342 342 342 VAL VAL A . n A 1 343 ARG 343 343 343 ARG ARG A . n A 1 344 LEU 344 344 344 LEU LEU A . n A 1 345 ILE 345 345 345 ILE ILE A . n A 1 346 ILE 346 346 346 ILE ILE A . n A 1 347 ARG 347 347 347 ARG ARG A . n A 1 348 ARG 348 348 348 ARG ARG A . n A 1 349 TYR 349 349 349 TYR TYR A . n A 1 350 SER 350 350 350 SER SER A . n A 1 351 SER 351 351 ? ? ? A . n A 1 352 GLU 352 352 ? ? ? A . n A 1 353 LYS 353 353 ? ? ? A . n A 1 354 HIS 354 354 ? ? ? A . n A 1 355 TYR 355 355 ? ? ? A . n A 1 356 GLY 356 356 356 GLY GLY A . n A 1 357 ARG 357 357 357 ARG ARG A . n A 1 358 GLU 358 358 358 GLU GLU A . n A 1 359 SER 359 359 359 SER SER A . n A 1 360 ARG 360 360 360 ARG ARG A . n A 1 361 GLN 361 361 361 GLN GLN A . n A 1 362 CYS 362 362 362 CYS CYS A . n A 1 363 PRO 363 363 363 PRO PRO A . n A 1 364 ILE 364 364 364 ILE ILE A . n A 1 365 PRO 365 365 365 PRO PRO A . n A 1 366 SER 366 366 366 SER SER A . n A 1 367 HIS 367 367 367 HIS HIS A . n A 1 368 VAL 368 368 368 VAL VAL A . n A 1 369 ILE 369 369 369 ILE ILE A . n A 1 370 GLN 370 370 370 GLN GLN A . n A 1 371 LYS 371 371 ? ? ? A . n A 1 372 LEU 372 372 ? ? ? A . n A 1 373 GLY 373 373 ? ? ? A . n A 1 374 THR 374 374 ? ? ? A . n A 1 375 GLY 375 375 ? ? ? A . n A 1 376 ASN 376 376 ? ? ? A . n A 1 377 TYR 377 377 ? ? ? A . n A 1 378 ASP 378 378 ? ? ? A . n A 1 379 VAL 379 379 379 VAL VAL A . n A 1 380 MET 380 380 380 MET MET A . n A 1 381 THR 381 381 381 THR THR A . n A 1 382 PRO 382 382 382 PRO PRO A . n A 1 383 MET 383 383 383 MET MET A . n A 1 384 VAL 384 384 384 VAL VAL A . n A 1 385 ASP 385 385 385 ASP ASP A . n A 1 386 ILE 386 386 386 ILE ILE A . n A 1 387 LEU 387 387 387 LEU LEU A . n A 1 388 MET 388 388 388 MET MET A . n A 1 389 LYS 389 389 389 LYS LYS A . n A 1 390 LEU 390 390 390 LEU LEU A . n A 1 391 PHE 391 391 391 PHE PHE A . n A 1 392 ARG 392 392 392 ARG ARG A . n A 1 393 ASN 393 393 393 ASN ASN A . n A 1 394 MET 394 394 394 MET MET A . n A 1 395 VAL 395 395 ? ? ? A . n A 1 396 ASN 396 396 ? ? ? A . n A 1 397 VAL 397 397 ? ? ? A . n A 1 398 LYS 398 398 ? ? ? A . n A 1 399 MET 399 399 ? ? ? A . n A 1 400 PRO 400 400 ? ? ? A . n A 1 401 PHE 401 401 ? ? ? A . n A 1 402 HIS 402 402 ? ? ? A . n A 1 403 LEU 403 403 ? ? ? A . n A 1 404 THR 404 404 404 THR THR A . n A 1 405 LEU 405 405 405 LEU LEU A . n A 1 406 LEU 406 406 406 LEU LEU A . n A 1 407 SER 407 407 407 SER SER A . n A 1 408 VAL 408 408 408 VAL VAL A . n A 1 409 CYS 409 409 409 CYS CYS A . n A 1 410 PHE 410 410 410 PHE PHE A . n A 1 411 CYS 411 411 411 CYS CYS A . n A 1 412 ASN 412 412 412 ASN ASN A . n A 1 413 LEU 413 413 413 LEU LEU A . n A 1 414 LYS 414 414 414 LYS LYS A . n A 1 415 ALA 415 415 ? ? ? A . n A 1 416 LEU 416 416 ? ? ? A . n A 1 417 ASN 417 417 ? ? ? A . n A 1 418 THR 418 418 ? ? ? A . n A 1 419 ALA 419 419 ? ? ? A . n A 1 420 LYS 420 420 ? ? ? A . n B 2 1 DT 1 1 ? ? ? B . n B 2 2 DC 2 2 ? ? ? B . n B 2 3 DA 3 3 3 DA DA B . n B 2 4 DA 4 4 4 DA DA B . n B 2 5 DG 5 5 5 DG DG B . n B 2 6 DG 6 6 6 DG DG B . n B 2 7 DG 7 7 7 DG DG B . n B 2 8 DT 8 8 8 DT DT B . n B 2 9 DC 9 9 9 DC DC B . n B 2 10 DC 10 10 10 DC DC B . n B 2 11 DT 11 11 11 DT DT B . n B 2 12 DA 12 12 12 DA DA B . n B 2 13 DG 13 13 13 DG DG B . n B 2 14 DG 14 14 14 DG DG B . n B 2 15 DA 15 15 15 DA DA B . n B 2 16 DC 16 16 16 DC DC B . n B 2 17 DC 17 17 17 DC DC B . n B 2 18 DC 18 18 18 DC DC B . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id TTP _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id TTP _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 TTP 1 501 1 TTP TTP A . D 4 CA 1 502 1 CA CA A . E 4 CA 1 503 2 CA CA A . F 5 HOH 1 601 70 HOH HOH A . F 5 HOH 2 602 134 HOH HOH A . F 5 HOH 3 603 107 HOH HOH A . F 5 HOH 4 604 52 HOH HOH A . F 5 HOH 5 605 11 HOH HOH A . F 5 HOH 6 606 53 HOH HOH A . F 5 HOH 7 607 23 HOH HOH A . F 5 HOH 8 608 68 HOH HOH A . F 5 HOH 9 609 26 HOH HOH A . F 5 HOH 10 610 135 HOH HOH A . F 5 HOH 11 611 57 HOH HOH A . F 5 HOH 12 612 7 HOH HOH A . F 5 HOH 13 613 99 HOH HOH A . F 5 HOH 14 614 81 HOH HOH A . F 5 HOH 15 615 9 HOH HOH A . F 5 HOH 16 616 24 HOH HOH A . F 5 HOH 17 617 37 HOH HOH A . F 5 HOH 18 618 105 HOH HOH A . F 5 HOH 19 619 93 HOH HOH A . F 5 HOH 20 620 49 HOH HOH A . F 5 HOH 21 621 8 HOH HOH A . F 5 HOH 22 622 25 HOH HOH A . F 5 HOH 23 623 139 HOH HOH A . F 5 HOH 24 624 14 HOH HOH A . F 5 HOH 25 625 60 HOH HOH A . F 5 HOH 26 626 78 HOH HOH A . F 5 HOH 27 627 42 HOH HOH A . F 5 HOH 28 628 132 HOH HOH A . F 5 HOH 29 629 133 HOH HOH A . F 5 HOH 30 630 5 HOH HOH A . F 5 HOH 31 631 44 HOH HOH A . F 5 HOH 32 632 3 HOH HOH A . F 5 HOH 33 633 41 HOH HOH A . F 5 HOH 34 634 1 HOH HOH A . F 5 HOH 35 635 136 HOH HOH A . F 5 HOH 36 636 71 HOH HOH A . F 5 HOH 37 637 121 HOH HOH A . F 5 HOH 38 638 16 HOH HOH A . F 5 HOH 39 639 21 HOH HOH A . F 5 HOH 40 640 43 HOH HOH A . F 5 HOH 41 641 2 HOH HOH A . F 5 HOH 42 642 32 HOH HOH A . F 5 HOH 43 643 12 HOH HOH A . F 5 HOH 44 644 39 HOH HOH A . F 5 HOH 45 645 10 HOH HOH A . F 5 HOH 46 646 67 HOH HOH A . F 5 HOH 47 647 59 HOH HOH A . F 5 HOH 48 648 47 HOH HOH A . F 5 HOH 49 649 123 HOH HOH A . F 5 HOH 50 650 119 HOH HOH A . F 5 HOH 51 651 31 HOH HOH A . F 5 HOH 52 652 115 HOH HOH A . F 5 HOH 53 653 87 HOH HOH A . F 5 HOH 54 654 13 HOH HOH A . F 5 HOH 55 655 27 HOH HOH A . F 5 HOH 56 656 127 HOH HOH A . F 5 HOH 57 657 100 HOH HOH A . F 5 HOH 58 658 92 HOH HOH A . F 5 HOH 59 659 91 HOH HOH A . F 5 HOH 60 660 4 HOH HOH A . F 5 HOH 61 661 65 HOH HOH A . F 5 HOH 62 662 15 HOH HOH A . F 5 HOH 63 663 40 HOH HOH A . F 5 HOH 64 664 17 HOH HOH A . F 5 HOH 65 665 22 HOH HOH A . F 5 HOH 66 666 140 HOH HOH A . F 5 HOH 67 667 94 HOH HOH A . F 5 HOH 68 668 30 HOH HOH A . F 5 HOH 69 669 58 HOH HOH A . F 5 HOH 70 670 80 HOH HOH A . F 5 HOH 71 671 35 HOH HOH A . F 5 HOH 72 672 113 HOH HOH A . F 5 HOH 73 673 122 HOH HOH A . F 5 HOH 74 674 142 HOH HOH A . F 5 HOH 75 675 77 HOH HOH A . F 5 HOH 76 676 18 HOH HOH A . F 5 HOH 77 677 63 HOH HOH A . F 5 HOH 78 678 104 HOH HOH A . F 5 HOH 79 679 66 HOH HOH A . F 5 HOH 80 680 116 HOH HOH A . F 5 HOH 81 681 110 HOH HOH A . F 5 HOH 82 682 128 HOH HOH A . F 5 HOH 83 683 33 HOH HOH A . F 5 HOH 84 684 90 HOH HOH A . F 5 HOH 85 685 101 HOH HOH A . F 5 HOH 86 686 84 HOH HOH A . F 5 HOH 87 687 76 HOH HOH A . F 5 HOH 88 688 28 HOH HOH A . F 5 HOH 89 689 82 HOH HOH A . F 5 HOH 90 690 114 HOH HOH A . F 5 HOH 91 691 72 HOH HOH A . F 5 HOH 92 692 117 HOH HOH A . F 5 HOH 93 693 130 HOH HOH A . F 5 HOH 94 694 34 HOH HOH A . F 5 HOH 95 695 56 HOH HOH A . F 5 HOH 96 696 102 HOH HOH A . F 5 HOH 97 697 103 HOH HOH A . F 5 HOH 98 698 51 HOH HOH A . F 5 HOH 99 699 64 HOH HOH A . F 5 HOH 100 700 79 HOH HOH A . F 5 HOH 101 701 120 HOH HOH A . F 5 HOH 102 702 69 HOH HOH A . F 5 HOH 103 703 96 HOH HOH A . F 5 HOH 104 704 141 HOH HOH A . F 5 HOH 105 705 74 HOH HOH A . F 5 HOH 106 706 46 HOH HOH A . F 5 HOH 107 707 147 HOH HOH A . F 5 HOH 108 708 124 HOH HOH A . F 5 HOH 109 709 109 HOH HOH A . F 5 HOH 110 710 108 HOH HOH A . F 5 HOH 111 711 95 HOH HOH A . F 5 HOH 112 712 118 HOH HOH A . F 5 HOH 113 713 55 HOH HOH A . F 5 HOH 114 714 29 HOH HOH A . F 5 HOH 115 715 61 HOH HOH A . F 5 HOH 116 716 131 HOH HOH A . F 5 HOH 117 717 89 HOH HOH A . F 5 HOH 118 718 73 HOH HOH A . F 5 HOH 119 719 125 HOH HOH A . F 5 HOH 120 720 126 HOH HOH A . F 5 HOH 121 721 98 HOH HOH A . G 5 HOH 1 101 62 HOH HOH B . G 5 HOH 2 102 6 HOH HOH B . G 5 HOH 3 103 88 HOH HOH B . G 5 HOH 4 104 48 HOH HOH B . G 5 HOH 5 105 138 HOH HOH B . G 5 HOH 6 106 20 HOH HOH B . G 5 HOH 7 107 83 HOH HOH B . G 5 HOH 8 108 54 HOH HOH B . G 5 HOH 9 109 75 HOH HOH B . G 5 HOH 10 110 50 HOH HOH B . G 5 HOH 11 111 146 HOH HOH B . G 5 HOH 12 112 38 HOH HOH B . G 5 HOH 13 113 36 HOH HOH B . G 5 HOH 14 114 137 HOH HOH B . G 5 HOH 15 115 86 HOH HOH B . G 5 HOH 16 116 19 HOH HOH B . G 5 HOH 17 117 129 HOH HOH B . G 5 HOH 18 118 106 HOH HOH B . G 5 HOH 19 119 85 HOH HOH B . G 5 HOH 20 120 111 HOH HOH B . G 5 HOH 21 121 145 HOH HOH B . G 5 HOH 22 122 144 HOH HOH B . G 5 HOH 23 123 112 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 9DDR _cell.details ? _cell.formula_units_Z ? _cell.length_a 97.556 _cell.length_a_esd ? _cell.length_b 97.556 _cell.length_b_esd ? _cell.length_c 202.148 _cell.length_c_esd ? _cell.volume 1666126.802 _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9DDR _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall 'P 65 2 (x,y,z+1/12)' _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9DDR _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.64 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 53.47 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;100 mM HEPES pH 7 1.5-1.8 M Ammonium Sulfate 5 mM EDTA ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 291 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type NOIR-1 _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-05-29 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 4.2.2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 4.2.2 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate 42.04 _reflns.entry_id 9DDR _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.15 _reflns.d_resolution_low 47.42 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 31750 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.89 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 31.10 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.02169 _reflns.pdbx_Rpim_I_all 0.01534 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1 _reflns.pdbx_CC_star 1 _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.01534 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.15 _reflns_shell.d_res_low 2.227 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 3105 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.894 _reflns_shell.pdbx_CC_star 0.972 _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 99.94 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.2874 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 56.28 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9DDR _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.15 _refine.ls_d_res_low 47.42 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 31722 _refine.ls_number_reflns_R_free 1595 _refine.ls_number_reflns_R_work 30127 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.90 _refine.ls_percent_reflns_R_free 5.03 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2389 _refine.ls_R_factor_R_free 0.2802 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2368 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 30.5222 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3070 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.15 _refine_hist.d_res_low 47.42 _refine_hist.number_atoms_solvent 144 _refine_hist.number_atoms_total 3397 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2893 _refine_hist.pdbx_number_atoms_nucleic_acid 329 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0046 ? 3331 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.7975 ? 4564 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0422 ? 530 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0079 ? 524 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 20.1997 ? 1306 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.15 2.22 . . 156 2668 99.96 . . . . 0.3026 . . . . . . . . . . . 0.3365 'X-RAY DIFFRACTION' 2.22 2.30 . . 165 2630 99.89 . . . . 0.3144 . . . . . . . . . . . 0.3523 'X-RAY DIFFRACTION' 2.30 2.39 . . 134 2697 99.86 . . . . 0.2959 . . . . . . . . . . . 0.4058 'X-RAY DIFFRACTION' 2.39 2.50 . . 124 2704 99.82 . . . . 0.2900 . . . . . . . . . . . 0.3358 'X-RAY DIFFRACTION' 2.50 2.63 . . 140 2707 100.00 . . . . 0.2800 . . . . . . . . . . . 0.3164 'X-RAY DIFFRACTION' 2.63 2.80 . . 154 2676 99.72 . . . . 0.2746 . . . . . . . . . . . 0.3070 'X-RAY DIFFRACTION' 2.80 3.01 . . 133 2732 99.97 . . . . 0.2877 . . . . . . . . . . . 0.3084 'X-RAY DIFFRACTION' 3.01 3.31 . . 152 2735 100.00 . . . . 0.2509 . . . . . . . . . . . 0.2799 'X-RAY DIFFRACTION' 3.32 3.79 . . 158 2748 99.90 . . . . 0.2269 . . . . . . . . . . . 0.2869 'X-RAY DIFFRACTION' 3.80 4.78 . . 144 2810 99.97 . . . . 0.1868 . . . . . . . . . . . 0.2283 'X-RAY DIFFRACTION' 4.78 47.42 . . 135 3020 99.87 . . . . 0.2144 . . . . . . . . . . . 0.2520 # _struct.entry_id 9DDR _struct.title 'Ternary substrate complex of DNA polymerase iota with DNA (template A), Ca2+, and dTTP' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9DDR _struct_keywords.text 'DNA, Polymerase, Lesion, REPLICATION' _struct_keywords.pdbx_keywords REPLICATION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP POLI_HUMAN Q9UNA4 ? 1 ;MELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMN VRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNN QSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIP GIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNK IEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMP FHLTLLSVCFCNLKALNTAK ; 26 2 PDB 9DDR 9DDR ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9DDR A 1 ? 420 ? Q9UNA4 26 ? 445 ? 1 420 2 2 9DDR B 1 ? 18 ? 9DDR 1 ? 18 ? 1 18 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 10650 ? 1 MORE -110 ? 1 'SSA (A^2)' 36750 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5000000000 -0.8660254038 0.0000000000 48.7780000000 -0.8660254038 -0.5000000000 0.0000000000 84.4859742916 0.0000000000 0.0000000000 -1.0000000000 33.6913333333 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 CYS A 37 ? ASN A 47 ? CYS A 37 ASN A 47 1 ? 11 HELX_P HELX_P2 AA2 PRO A 48 ? LYS A 51 ? PRO A 48 LYS A 51 5 ? 4 HELX_P HELX_P3 AA3 ASN A 67 ? LEU A 73 ? ASN A 67 LEU A 73 1 ? 7 HELX_P HELX_P4 AA4 VAL A 81 ? CYS A 88 ? VAL A 81 CYS A 88 1 ? 8 HELX_P HELX_P5 AA5 LEU A 99 ? SER A 117 ? LEU A 99 SER A 117 1 ? 19 HELX_P HELX_P6 AA6 LEU A 132 ? GLN A 142 ? LEU A 132 GLN A 142 1 ? 11 HELX_P HELX_P7 AA7 GLN A 144 ? ALA A 150 ? GLN A 144 ALA A 150 1 ? 7 HELX_P HELX_P8 AA8 ASN A 159 ? GLN A 161 ? ASN A 159 GLN A 161 5 ? 3 HELX_P HELX_P9 AA9 ASP A 167 ? GLY A 192 ? ASP A 167 GLY A 192 1 ? 26 HELX_P HELX_P10 AB1 ASN A 202 ? GLY A 211 ? ASN A 202 GLY A 211 1 ? 10 HELX_P HELX_P11 AB2 LEU A 222 ? GLU A 224 ? LEU A 222 GLU A 224 5 ? 3 HELX_P HELX_P12 AB3 SER A 225 ? SER A 232 ? SER A 225 SER A 232 1 ? 8 HELX_P HELX_P13 AB4 HIS A 235 ? ILE A 239 ? HIS A 235 ILE A 239 5 ? 5 HELX_P HELX_P14 AB5 GLY A 243 ? ALA A 252 ? GLY A 243 ALA A 252 1 ? 10 HELX_P HELX_P15 AB6 SER A 257 ? PHE A 264 ? SER A 257 PHE A 264 1 ? 8 HELX_P HELX_P16 AB7 SER A 265 ? GLY A 274 ? SER A 265 GLY A 274 1 ? 10 HELX_P HELX_P17 AB8 GLY A 274 ? PHE A 286 ? GLY A 274 PHE A 286 1 ? 13 HELX_P HELX_P18 AB9 GLU A 314 ? GLU A 316 ? GLU A 314 GLU A 316 5 ? 3 HELX_P HELX_P19 AC1 ALA A 317 ? GLY A 336 ? ALA A 317 GLY A 336 1 ? 20 HELX_P HELX_P20 AC2 MET A 380 ? ASN A 393 ? MET A 380 ASN A 393 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 34 OD1 ? ? ? 1_555 D CA . CA ? ? A ASP 34 A CA 502 1_555 ? ? ? ? ? ? ? 2.168 ? ? metalc2 metalc ? ? A ASP 34 OD1 ? ? ? 1_555 E CA . CA ? ? A ASP 34 A CA 503 1_555 ? ? ? ? ? ? ? 2.710 ? ? metalc3 metalc ? ? A ASP 34 OD2 ? ? ? 1_555 E CA . CA ? ? A ASP 34 A CA 503 1_555 ? ? ? ? ? ? ? 3.052 ? ? metalc4 metalc ? ? A LEU 35 O ? ? ? 1_555 D CA . CA ? ? A LEU 35 A CA 502 1_555 ? ? ? ? ? ? ? 2.233 ? ? metalc5 metalc ? ? A ASP 126 OD2 ? ? ? 1_555 D CA . CA ? ? A ASP 126 A CA 502 1_555 ? ? ? ? ? ? ? 2.336 ? ? metalc6 metalc ? ? A ASP 126 OD1 ? ? ? 1_555 E CA . CA ? ? A ASP 126 A CA 503 1_555 ? ? ? ? ? ? ? 2.706 ? ? metalc7 metalc ? ? A ASP 126 OD2 ? ? ? 1_555 E CA . CA ? ? A ASP 126 A CA 503 1_555 ? ? ? ? ? ? ? 2.985 ? ? metalc8 metalc ? ? A GLU 127 OE2 ? ? ? 1_555 E CA . CA ? ? A GLU 127 A CA 503 1_555 ? ? ? ? ? ? ? 2.814 ? ? metalc9 metalc ? ? C TTP . O2A ? ? ? 1_555 D CA . CA ? ? A TTP 501 A CA 502 1_555 ? ? ? ? ? ? ? 2.152 ? ? metalc10 metalc ? ? C TTP . O1B ? ? ? 1_555 D CA . CA ? ? A TTP 501 A CA 502 1_555 ? ? ? ? ? ? ? 2.314 ? ? metalc11 metalc ? ? C TTP . O1G ? ? ? 1_555 D CA . CA ? ? A TTP 501 A CA 502 1_555 ? ? ? ? ? ? ? 2.189 ? ? metalc12 metalc ? ? C TTP . O2A ? ? ? 1_555 E CA . CA ? ? A TTP 501 A CA 503 1_555 ? ? ? ? ? ? ? 2.069 ? ? metalc13 metalc ? ? E CA . CA ? ? ? 1_555 B DC 18 "O3'" ? ? A CA 503 B DC 18 1_555 ? ? ? ? ? ? ? 2.689 ? ? hydrog1 hydrog ? ? B DG 5 N1 ? ? ? 1_555 B DC 18 N3 ? ? B DG 5 B DC 18 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 5 N2 ? ? ? 1_555 B DC 18 O2 ? ? B DG 5 B DC 18 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 5 O6 ? ? ? 1_555 B DC 18 N4 ? ? B DG 5 B DC 18 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 6 N1 ? ? ? 1_555 B DC 17 N3 ? ? B DG 6 B DC 17 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 6 N2 ? ? ? 1_555 B DC 17 O2 ? ? B DG 6 B DC 17 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 6 O6 ? ? ? 1_555 B DC 17 N4 ? ? B DG 6 B DC 17 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 7 N1 ? ? ? 1_555 B DC 16 N3 ? ? B DG 7 B DC 16 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 7 N2 ? ? ? 1_555 B DC 16 O2 ? ? B DG 7 B DC 16 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 7 O6 ? ? ? 1_555 B DC 16 N4 ? ? B DG 7 B DC 16 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DT 8 N3 ? ? ? 1_555 B DA 15 N1 ? ? B DT 8 B DA 15 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 8 O4 ? ? ? 1_555 B DA 15 N6 ? ? B DT 8 B DA 15 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 9 N3 ? ? ? 1_555 B DG 14 N1 ? ? B DC 9 B DG 14 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 9 N4 ? ? ? 1_555 B DG 14 O6 ? ? B DC 9 B DG 14 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 9 O2 ? ? ? 1_555 B DG 14 N2 ? ? B DC 9 B DG 14 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 10 N3 ? ? ? 1_555 B DG 13 N1 ? ? B DC 10 B DG 13 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 10 N4 ? ? ? 1_555 B DG 13 O6 ? ? B DC 10 B DG 13 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DC 10 O2 ? ? ? 1_555 B DG 13 N2 ? ? B DC 10 B DG 13 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DT 11 N3 ? ? ? 1_555 B DA 12 N1 ? ? B DT 11 B DA 12 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DT 11 O4 ? ? ? 1_555 B DA 12 N6 ? ? B DT 11 B DA 12 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DA 12 N1 ? ? ? 1_555 B DT 11 N3 ? ? B DA 12 B DT 11 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DA 12 N6 ? ? ? 1_555 B DT 11 O4 ? ? B DA 12 B DT 11 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 13 N1 ? ? ? 1_555 B DC 10 N3 ? ? B DG 13 B DC 10 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DG 13 N2 ? ? ? 1_555 B DC 10 O2 ? ? B DG 13 B DC 10 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DG 13 O6 ? ? ? 1_555 B DC 10 N4 ? ? B DG 13 B DC 10 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DG 14 N1 ? ? ? 1_555 B DC 9 N3 ? ? B DG 14 B DC 9 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DG 14 N2 ? ? ? 1_555 B DC 9 O2 ? ? B DG 14 B DC 9 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DG 14 O6 ? ? ? 1_555 B DC 9 N4 ? ? B DG 14 B DC 9 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DA 15 N1 ? ? ? 1_555 B DT 8 N3 ? ? B DA 15 B DT 8 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DA 15 N6 ? ? ? 1_555 B DT 8 O4 ? ? B DA 15 B DT 8 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DC 16 N3 ? ? ? 1_555 B DG 7 N1 ? ? B DC 16 B DG 7 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DC 16 N4 ? ? ? 1_555 B DG 7 O6 ? ? B DC 16 B DG 7 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DC 16 O2 ? ? ? 1_555 B DG 7 N2 ? ? B DC 16 B DG 7 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DC 17 N3 ? ? ? 1_555 B DG 6 N1 ? ? B DC 17 B DG 6 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DC 17 N4 ? ? ? 1_555 B DG 6 O6 ? ? B DC 17 B DG 6 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DC 17 O2 ? ? ? 1_555 B DG 6 N2 ? ? B DC 17 B DG 6 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DC 18 N3 ? ? ? 1_555 B DG 5 N1 ? ? B DC 18 B DG 5 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B DC 18 N4 ? ? ? 1_555 B DG 5 O6 ? ? B DC 18 B DG 5 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B DC 18 O2 ? ? ? 1_555 B DG 5 N2 ? ? B DC 18 B DG 5 10_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? D CA . ? A CA 502 ? 1_555 O ? A LEU 35 ? A LEU 35 ? 1_555 92.7 ? 2 OD1 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? D CA . ? A CA 502 ? 1_555 OD2 ? A ASP 126 ? A ASP 126 ? 1_555 87.0 ? 3 O ? A LEU 35 ? A LEU 35 ? 1_555 CA ? D CA . ? A CA 502 ? 1_555 OD2 ? A ASP 126 ? A ASP 126 ? 1_555 87.6 ? 4 OD1 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? D CA . ? A CA 502 ? 1_555 O2A ? C TTP . ? A TTP 501 ? 1_555 105.1 ? 5 O ? A LEU 35 ? A LEU 35 ? 1_555 CA ? D CA . ? A CA 502 ? 1_555 O2A ? C TTP . ? A TTP 501 ? 1_555 156.9 ? 6 OD2 ? A ASP 126 ? A ASP 126 ? 1_555 CA ? D CA . ? A CA 502 ? 1_555 O2A ? C TTP . ? A TTP 501 ? 1_555 78.8 ? 7 OD1 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? D CA . ? A CA 502 ? 1_555 O1B ? C TTP . ? A TTP 501 ? 1_555 174.4 ? 8 O ? A LEU 35 ? A LEU 35 ? 1_555 CA ? D CA . ? A CA 502 ? 1_555 O1B ? C TTP . ? A TTP 501 ? 1_555 88.4 ? 9 OD2 ? A ASP 126 ? A ASP 126 ? 1_555 CA ? D CA . ? A CA 502 ? 1_555 O1B ? C TTP . ? A TTP 501 ? 1_555 87.5 ? 10 O2A ? C TTP . ? A TTP 501 ? 1_555 CA ? D CA . ? A CA 502 ? 1_555 O1B ? C TTP . ? A TTP 501 ? 1_555 72.5 ? 11 OD1 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? D CA . ? A CA 502 ? 1_555 O1G ? C TTP . ? A TTP 501 ? 1_555 108.9 ? 12 O ? A LEU 35 ? A LEU 35 ? 1_555 CA ? D CA . ? A CA 502 ? 1_555 O1G ? C TTP . ? A TTP 501 ? 1_555 101.6 ? 13 OD2 ? A ASP 126 ? A ASP 126 ? 1_555 CA ? D CA . ? A CA 502 ? 1_555 O1G ? C TTP . ? A TTP 501 ? 1_555 161.0 ? 14 O2A ? C TTP . ? A TTP 501 ? 1_555 CA ? D CA . ? A CA 502 ? 1_555 O1G ? C TTP . ? A TTP 501 ? 1_555 86.7 ? 15 O1B ? C TTP . ? A TTP 501 ? 1_555 CA ? D CA . ? A CA 502 ? 1_555 O1G ? C TTP . ? A TTP 501 ? 1_555 76.3 ? 16 OD1 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 OD2 ? A ASP 34 ? A ASP 34 ? 1_555 44.2 ? 17 OD1 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 OD1 ? A ASP 126 ? A ASP 126 ? 1_555 99.0 ? 18 OD2 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 OD1 ? A ASP 126 ? A ASP 126 ? 1_555 132.8 ? 19 OD1 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 OD2 ? A ASP 126 ? A ASP 126 ? 1_555 65.8 ? 20 OD2 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 OD2 ? A ASP 126 ? A ASP 126 ? 1_555 110.0 ? 21 OD1 ? A ASP 126 ? A ASP 126 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 OD2 ? A ASP 126 ? A ASP 126 ? 1_555 45.0 ? 22 OD1 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 OE2 ? A GLU 127 ? A GLU 127 ? 1_555 109.0 ? 23 OD2 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 OE2 ? A GLU 127 ? A GLU 127 ? 1_555 74.0 ? 24 OD1 ? A ASP 126 ? A ASP 126 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 OE2 ? A GLU 127 ? A GLU 127 ? 1_555 101.9 ? 25 OD2 ? A ASP 126 ? A ASP 126 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 OE2 ? A GLU 127 ? A GLU 127 ? 1_555 140.0 ? 26 OD1 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 O2A ? C TTP . ? A TTP 501 ? 1_555 90.7 ? 27 OD2 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 O2A ? C TTP . ? A TTP 501 ? 1_555 111.1 ? 28 OD1 ? A ASP 126 ? A ASP 126 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 O2A ? C TTP . ? A TTP 501 ? 1_555 94.1 ? 29 OD2 ? A ASP 126 ? A ASP 126 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 O2A ? C TTP . ? A TTP 501 ? 1_555 65.9 ? 30 OE2 ? A GLU 127 ? A GLU 127 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 O2A ? C TTP . ? A TTP 501 ? 1_555 152.1 ? 31 OD1 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 "O3'" ? B DC 18 ? B DC 18 ? 1_555 172.4 ? 32 OD2 ? A ASP 34 ? A ASP 34 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 "O3'" ? B DC 18 ? B DC 18 ? 1_555 131.7 ? 33 OD1 ? A ASP 126 ? A ASP 126 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 "O3'" ? B DC 18 ? B DC 18 ? 1_555 87.9 ? 34 OD2 ? A ASP 126 ? A ASP 126 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 "O3'" ? B DC 18 ? B DC 18 ? 1_555 118.1 ? 35 OE2 ? A GLU 127 ? A GLU 127 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 "O3'" ? B DC 18 ? B DC 18 ? 1_555 72.5 ? 36 O2A ? C TTP . ? A TTP 501 ? 1_555 CA ? E CA . ? A CA 503 ? 1_555 "O3'" ? B DC 18 ? B DC 18 ? 1_555 85.4 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 4 ? AA3 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 120 ? LEU A 123 ? VAL A 120 LEU A 123 AA1 2 GLU A 127 ? ASP A 131 ? GLU A 127 ASP A 131 AA1 3 ILE A 30 ? LEU A 35 ? ILE A 30 LEU A 35 AA1 4 GLY A 195 ? ALA A 200 ? GLY A 195 ALA A 200 AA1 5 GLN A 218 ? VAL A 220 ? GLN A 218 VAL A 220 AA1 6 HIS A 156 ? VAL A 157 ? HIS A 156 VAL A 157 AA2 1 MET A 79 ? ASN A 80 ? MET A 79 ASN A 80 AA2 2 LEU A 62 ? CYS A 66 ? LEU A 62 CYS A 66 AA2 3 LEU A 55 ? GLN A 59 ? LEU A 55 GLN A 59 AA2 4 VAL A 92 ? ASN A 95 ? VAL A 92 ASN A 95 AA3 1 SER A 301 ? SER A 307 ? SER A 301 SER A 307 AA3 2 LEU A 405 ? LYS A 414 ? LEU A 405 LYS A 414 AA3 3 LYS A 338 ? ARG A 347 ? LYS A 338 ARG A 347 AA3 4 ARG A 357 ? PRO A 363 ? ARG A 357 PRO A 363 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 121 ? N GLU A 121 O PHE A 129 ? O PHE A 129 AA1 2 3 O ASN A 128 ? O ASN A 128 N VAL A 33 ? N VAL A 33 AA1 3 4 N ILE A 30 ? N ILE A 30 O ALA A 200 ? O ALA A 200 AA1 4 5 N VAL A 199 ? N VAL A 199 O THR A 219 ? O THR A 219 AA1 5 6 O GLN A 218 ? O GLN A 218 N HIS A 156 ? N HIS A 156 AA2 1 2 O MET A 79 ? O MET A 79 N VAL A 63 ? N VAL A 63 AA2 2 3 O THR A 65 ? O THR A 65 N VAL A 57 ? N VAL A 57 AA2 3 4 N GLY A 56 ? N GLY A 56 O VAL A 92 ? O VAL A 92 AA3 1 2 N PHE A 302 ? N PHE A 302 O PHE A 410 ? O PHE A 410 AA3 2 3 O LYS A 414 ? O LYS A 414 N LYS A 338 ? N LYS A 338 AA3 3 4 N ILE A 346 ? N ILE A 346 O GLU A 358 ? O GLU A 358 # _pdbx_entry_details.entry_id 9DDR _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HG1 A THR 246 ? ? OP1 B DC 16 ? ? 1.52 2 1 HZ3 A LYS 85 ? ? O A LEU 91 ? ? 1.59 3 1 OE1 A GLU 134 ? ? O A HOH 601 ? ? 1.73 4 1 OD1 A ASP 131 ? ? O A HOH 601 ? ? 2.01 5 1 O A HOH 681 ? ? O A HOH 712 ? ? 2.04 6 1 OP2 B DT 11 ? ? O B HOH 101 ? ? 2.17 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 OG A SER 307 ? ? 1_555 OP1 B DA 4 ? ? 10_665 1.88 2 1 OE1 A GLU 49 ? ? 1_555 OE2 A GLU 49 ? ? 9_555 2.06 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DA 3 ? ? "C1'" B DA 3 ? ? N9 B DA 3 ? ? 110.20 108.30 1.90 0.30 N 2 1 "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 110.34 108.30 2.04 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 37 ? ? 28.72 62.65 2 1 ASN A 47 ? ? -118.07 78.64 3 1 PRO A 48 ? ? -49.44 -18.98 4 1 LEU A 50 ? ? -55.21 -5.64 5 1 ASP A 52 ? ? 73.44 -14.75 6 1 LYS A 60 ? ? 61.36 -118.23 7 1 LEU A 78 ? ? 71.89 40.42 8 1 ASN A 256 ? ? -133.55 -42.96 9 1 LYS A 271 ? ? -87.00 31.55 10 1 GLU A 272 ? ? -131.54 -35.39 11 1 ASP A 289 ? ? -168.56 108.92 12 1 LYS A 310 ? ? 16.14 43.99 13 1 CYS A 311 ? ? -78.90 26.65 14 1 VAL A 315 ? ? -58.56 -6.08 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x-y,x,z+5/6 3 y,-x+y,z+1/6 4 -y,x-y,z+2/3 5 -x+y,-x,z+1/3 6 x-y,-y,-z 7 -x,-x+y,-z+1/3 8 -x,-y,z+1/2 9 y,x,-z+2/3 10 -y,-x,-z+1/6 11 -x+y,y,-z+1/2 12 x,x-y,-z+5/6 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 721 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 5.96 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLU 2 ? A GLU 2 3 1 Y 1 A LEU 3 ? A LEU 3 4 1 Y 1 A ALA 4 ? A ALA 4 5 1 Y 1 A ASP 5 ? A ASP 5 6 1 Y 1 A VAL 6 ? A VAL 6 7 1 Y 1 A GLY 7 ? A GLY 7 8 1 Y 1 A ALA 8 ? A ALA 8 9 1 Y 1 A ALA 9 ? A ALA 9 10 1 Y 1 A ALA 10 ? A ALA 10 11 1 Y 1 A SER 11 ? A SER 11 12 1 Y 1 A SER 12 ? A SER 12 13 1 Y 1 A GLN 13 ? A GLN 13 14 1 Y 1 A GLY 14 ? A GLY 14 15 1 Y 1 A VAL 15 ? A VAL 15 16 1 Y 1 A HIS 16 ? A HIS 16 17 1 Y 1 A ASP 17 ? A ASP 17 18 1 Y 1 A GLN 18 ? A GLN 18 19 1 Y 1 A VAL 19 ? A VAL 19 20 1 Y 1 A LEU 20 ? A LEU 20 21 1 Y 1 A PRO 21 ? A PRO 21 22 1 Y 1 A THR 22 ? A THR 22 23 1 Y 1 A PRO 23 ? A PRO 23 24 1 Y 1 A ASN 24 ? A ASN 24 25 1 Y 1 A ALA 25 ? A ALA 25 26 1 Y 1 A SER 351 ? A SER 351 27 1 Y 1 A GLU 352 ? A GLU 352 28 1 Y 1 A LYS 353 ? A LYS 353 29 1 Y 1 A HIS 354 ? A HIS 354 30 1 Y 1 A TYR 355 ? A TYR 355 31 1 Y 1 A LYS 371 ? A LYS 371 32 1 Y 1 A LEU 372 ? A LEU 372 33 1 Y 1 A GLY 373 ? A GLY 373 34 1 Y 1 A THR 374 ? A THR 374 35 1 Y 1 A GLY 375 ? A GLY 375 36 1 Y 1 A ASN 376 ? A ASN 376 37 1 Y 1 A TYR 377 ? A TYR 377 38 1 Y 1 A ASP 378 ? A ASP 378 39 1 Y 1 A VAL 395 ? A VAL 395 40 1 Y 1 A ASN 396 ? A ASN 396 41 1 Y 1 A VAL 397 ? A VAL 397 42 1 Y 1 A LYS 398 ? A LYS 398 43 1 Y 1 A MET 399 ? A MET 399 44 1 Y 1 A PRO 400 ? A PRO 400 45 1 Y 1 A PHE 401 ? A PHE 401 46 1 Y 1 A HIS 402 ? A HIS 402 47 1 Y 1 A LEU 403 ? A LEU 403 48 1 Y 1 A ALA 415 ? A ALA 415 49 1 Y 1 A LEU 416 ? A LEU 416 50 1 Y 1 A ASN 417 ? A ASN 417 51 1 Y 1 A THR 418 ? A THR 418 52 1 Y 1 A ALA 419 ? A ALA 419 53 1 Y 1 A LYS 420 ? A LYS 420 54 1 Y 1 B DT 1 ? B DT 1 55 1 Y 1 B DC 2 ? B DC 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DA OP3 O N N 89 DA P P N N 90 DA OP1 O N N 91 DA OP2 O N N 92 DA "O5'" O N N 93 DA "C5'" C N N 94 DA "C4'" C N R 95 DA "O4'" O N N 96 DA "C3'" C N S 97 DA "O3'" O N N 98 DA "C2'" C N N 99 DA "C1'" C N R 100 DA N9 N Y N 101 DA C8 C Y N 102 DA N7 N Y N 103 DA C5 C Y N 104 DA C6 C Y N 105 DA N6 N N N 106 DA N1 N Y N 107 DA C2 C Y N 108 DA N3 N Y N 109 DA C4 C Y N 110 DA HOP3 H N N 111 DA HOP2 H N N 112 DA "H5'" H N N 113 DA "H5''" H N N 114 DA "H4'" H N N 115 DA "H3'" H N N 116 DA "HO3'" H N N 117 DA "H2'" H N N 118 DA "H2''" H N N 119 DA "H1'" H N N 120 DA H8 H N N 121 DA H61 H N N 122 DA H62 H N N 123 DA H2 H N N 124 DC OP3 O N N 125 DC P P N N 126 DC OP1 O N N 127 DC OP2 O N N 128 DC "O5'" O N N 129 DC "C5'" C N N 130 DC "C4'" C N R 131 DC "O4'" O N N 132 DC "C3'" C N S 133 DC "O3'" O N N 134 DC "C2'" C N N 135 DC "C1'" C N R 136 DC N1 N N N 137 DC C2 C N N 138 DC O2 O N N 139 DC N3 N N N 140 DC C4 C N N 141 DC N4 N N N 142 DC C5 C N N 143 DC C6 C N N 144 DC HOP3 H N N 145 DC HOP2 H N N 146 DC "H5'" H N N 147 DC "H5''" H N N 148 DC "H4'" H N N 149 DC "H3'" H N N 150 DC "HO3'" H N N 151 DC "H2'" H N N 152 DC "H2''" H N N 153 DC "H1'" H N N 154 DC H41 H N N 155 DC H42 H N N 156 DC H5 H N N 157 DC H6 H N N 158 DG OP3 O N N 159 DG P P N N 160 DG OP1 O N N 161 DG OP2 O N N 162 DG "O5'" O N N 163 DG "C5'" C N N 164 DG "C4'" C N R 165 DG "O4'" O N N 166 DG "C3'" C N S 167 DG "O3'" O N N 168 DG "C2'" C N N 169 DG "C1'" C N R 170 DG N9 N Y N 171 DG C8 C Y N 172 DG N7 N Y N 173 DG C5 C Y N 174 DG C6 C N N 175 DG O6 O N N 176 DG N1 N N N 177 DG C2 C N N 178 DG N2 N N N 179 DG N3 N N N 180 DG C4 C Y N 181 DG HOP3 H N N 182 DG HOP2 H N N 183 DG "H5'" H N N 184 DG "H5''" H N N 185 DG "H4'" H N N 186 DG "H3'" H N N 187 DG "HO3'" H N N 188 DG "H2'" H N N 189 DG "H2''" H N N 190 DG "H1'" H N N 191 DG H8 H N N 192 DG H1 H N N 193 DG H21 H N N 194 DG H22 H N N 195 DT OP3 O N N 196 DT P P N N 197 DT OP1 O N N 198 DT OP2 O N N 199 DT "O5'" O N N 200 DT "C5'" C N N 201 DT "C4'" C N R 202 DT "O4'" O N N 203 DT "C3'" C N S 204 DT "O3'" O N N 205 DT "C2'" C N N 206 DT "C1'" C N R 207 DT N1 N N N 208 DT C2 C N N 209 DT O2 O N N 210 DT N3 N N N 211 DT C4 C N N 212 DT O4 O N N 213 DT C5 C N N 214 DT C7 C N N 215 DT C6 C N N 216 DT HOP3 H N N 217 DT HOP2 H N N 218 DT "H5'" H N N 219 DT "H5''" H N N 220 DT "H4'" H N N 221 DT "H3'" H N N 222 DT "HO3'" H N N 223 DT "H2'" H N N 224 DT "H2''" H N N 225 DT "H1'" H N N 226 DT H3 H N N 227 DT H71 H N N 228 DT H72 H N N 229 DT H73 H N N 230 DT H6 H N N 231 GLN N N N N 232 GLN CA C N S 233 GLN C C N N 234 GLN O O N N 235 GLN CB C N N 236 GLN CG C N N 237 GLN CD C N N 238 GLN OE1 O N N 239 GLN NE2 N N N 240 GLN OXT O N N 241 GLN H H N N 242 GLN H2 H N N 243 GLN HA H N N 244 GLN HB2 H N N 245 GLN HB3 H N N 246 GLN HG2 H N N 247 GLN HG3 H N N 248 GLN HE21 H N N 249 GLN HE22 H N N 250 GLN HXT H N N 251 GLU N N N N 252 GLU CA C N S 253 GLU C C N N 254 GLU O O N N 255 GLU CB C N N 256 GLU CG C N N 257 GLU CD C N N 258 GLU OE1 O N N 259 GLU OE2 O N N 260 GLU OXT O N N 261 GLU H H N N 262 GLU H2 H N N 263 GLU HA H N N 264 GLU HB2 H N N 265 GLU HB3 H N N 266 GLU HG2 H N N 267 GLU HG3 H N N 268 GLU HE2 H N N 269 GLU HXT H N N 270 GLY N N N N 271 GLY CA C N N 272 GLY C C N N 273 GLY O O N N 274 GLY OXT O N N 275 GLY H H N N 276 GLY H2 H N N 277 GLY HA2 H N N 278 GLY HA3 H N N 279 GLY HXT H N N 280 HIS N N N N 281 HIS CA C N S 282 HIS C C N N 283 HIS O O N N 284 HIS CB C N N 285 HIS CG C Y N 286 HIS ND1 N Y N 287 HIS CD2 C Y N 288 HIS CE1 C Y N 289 HIS NE2 N Y N 290 HIS OXT O N N 291 HIS H H N N 292 HIS H2 H N N 293 HIS HA H N N 294 HIS HB2 H N N 295 HIS HB3 H N N 296 HIS HD1 H N N 297 HIS HD2 H N N 298 HIS HE1 H N N 299 HIS HE2 H N N 300 HIS HXT H N N 301 HOH O O N N 302 HOH H1 H N N 303 HOH H2 H N N 304 ILE N N N N 305 ILE CA C N S 306 ILE C C N N 307 ILE O O N N 308 ILE CB C N S 309 ILE CG1 C N N 310 ILE CG2 C N N 311 ILE CD1 C N N 312 ILE OXT O N N 313 ILE H H N N 314 ILE H2 H N N 315 ILE HA H N N 316 ILE HB H N N 317 ILE HG12 H N N 318 ILE HG13 H N N 319 ILE HG21 H N N 320 ILE HG22 H N N 321 ILE HG23 H N N 322 ILE HD11 H N N 323 ILE HD12 H N N 324 ILE HD13 H N N 325 ILE HXT H N N 326 LEU N N N N 327 LEU CA C N S 328 LEU C C N N 329 LEU O O N N 330 LEU CB C N N 331 LEU CG C N N 332 LEU CD1 C N N 333 LEU CD2 C N N 334 LEU OXT O N N 335 LEU H H N N 336 LEU H2 H N N 337 LEU HA H N N 338 LEU HB2 H N N 339 LEU HB3 H N N 340 LEU HG H N N 341 LEU HD11 H N N 342 LEU HD12 H N N 343 LEU HD13 H N N 344 LEU HD21 H N N 345 LEU HD22 H N N 346 LEU HD23 H N N 347 LEU HXT H N N 348 LYS N N N N 349 LYS CA C N S 350 LYS C C N N 351 LYS O O N N 352 LYS CB C N N 353 LYS CG C N N 354 LYS CD C N N 355 LYS CE C N N 356 LYS NZ N N N 357 LYS OXT O N N 358 LYS H H N N 359 LYS H2 H N N 360 LYS HA H N N 361 LYS HB2 H N N 362 LYS HB3 H N N 363 LYS HG2 H N N 364 LYS HG3 H N N 365 LYS HD2 H N N 366 LYS HD3 H N N 367 LYS HE2 H N N 368 LYS HE3 H N N 369 LYS HZ1 H N N 370 LYS HZ2 H N N 371 LYS HZ3 H N N 372 LYS HXT H N N 373 MET N N N N 374 MET CA C N S 375 MET C C N N 376 MET O O N N 377 MET CB C N N 378 MET CG C N N 379 MET SD S N N 380 MET CE C N N 381 MET OXT O N N 382 MET H H N N 383 MET H2 H N N 384 MET HA H N N 385 MET HB2 H N N 386 MET HB3 H N N 387 MET HG2 H N N 388 MET HG3 H N N 389 MET HE1 H N N 390 MET HE2 H N N 391 MET HE3 H N N 392 MET HXT H N N 393 PHE N N N N 394 PHE CA C N S 395 PHE C C N N 396 PHE O O N N 397 PHE CB C N N 398 PHE CG C Y N 399 PHE CD1 C Y N 400 PHE CD2 C Y N 401 PHE CE1 C Y N 402 PHE CE2 C Y N 403 PHE CZ C Y N 404 PHE OXT O N N 405 PHE H H N N 406 PHE H2 H N N 407 PHE HA H N N 408 PHE HB2 H N N 409 PHE HB3 H N N 410 PHE HD1 H N N 411 PHE HD2 H N N 412 PHE HE1 H N N 413 PHE HE2 H N N 414 PHE HZ H N N 415 PHE HXT H N N 416 PRO N N N N 417 PRO CA C N S 418 PRO C C N N 419 PRO O O N N 420 PRO CB C N N 421 PRO CG C N N 422 PRO CD C N N 423 PRO OXT O N N 424 PRO H H N N 425 PRO HA H N N 426 PRO HB2 H N N 427 PRO HB3 H N N 428 PRO HG2 H N N 429 PRO HG3 H N N 430 PRO HD2 H N N 431 PRO HD3 H N N 432 PRO HXT H N N 433 SER N N N N 434 SER CA C N S 435 SER C C N N 436 SER O O N N 437 SER CB C N N 438 SER OG O N N 439 SER OXT O N N 440 SER H H N N 441 SER H2 H N N 442 SER HA H N N 443 SER HB2 H N N 444 SER HB3 H N N 445 SER HG H N N 446 SER HXT H N N 447 THR N N N N 448 THR CA C N S 449 THR C C N N 450 THR O O N N 451 THR CB C N R 452 THR OG1 O N N 453 THR CG2 C N N 454 THR OXT O N N 455 THR H H N N 456 THR H2 H N N 457 THR HA H N N 458 THR HB H N N 459 THR HG1 H N N 460 THR HG21 H N N 461 THR HG22 H N N 462 THR HG23 H N N 463 THR HXT H N N 464 TTP PA P N S 465 TTP O1A O N N 466 TTP O2A O N N 467 TTP O3A O N N 468 TTP PB P N S 469 TTP O1B O N N 470 TTP O2B O N N 471 TTP O3B O N N 472 TTP PG P N N 473 TTP O1G O N N 474 TTP O2G O N N 475 TTP O3G O N N 476 TTP "O5'" O N N 477 TTP "C5'" C N N 478 TTP "C4'" C N R 479 TTP "O4'" O N N 480 TTP "C3'" C N S 481 TTP "O3'" O N N 482 TTP "C2'" C N N 483 TTP "C1'" C N R 484 TTP N1 N N N 485 TTP C2 C N N 486 TTP O2 O N N 487 TTP N3 N N N 488 TTP C4 C N N 489 TTP O4 O N N 490 TTP C5 C N N 491 TTP C5M C N N 492 TTP C6 C N N 493 TTP HOA2 H N N 494 TTP HOB2 H N N 495 TTP HOG2 H N N 496 TTP HOG3 H N N 497 TTP "H5'1" H N N 498 TTP "H5'2" H N N 499 TTP "H4'" H N N 500 TTP "H3'" H N N 501 TTP "HO3'" H N N 502 TTP "H2'1" H N N 503 TTP "H2'2" H N N 504 TTP "H1'" H N N 505 TTP HN3 H N N 506 TTP HM51 H N N 507 TTP HM52 H N N 508 TTP HM53 H N N 509 TTP H6 H N N 510 TYR N N N N 511 TYR CA C N S 512 TYR C C N N 513 TYR O O N N 514 TYR CB C N N 515 TYR CG C Y N 516 TYR CD1 C Y N 517 TYR CD2 C Y N 518 TYR CE1 C Y N 519 TYR CE2 C Y N 520 TYR CZ C Y N 521 TYR OH O N N 522 TYR OXT O N N 523 TYR H H N N 524 TYR H2 H N N 525 TYR HA H N N 526 TYR HB2 H N N 527 TYR HB3 H N N 528 TYR HD1 H N N 529 TYR HD2 H N N 530 TYR HE1 H N N 531 TYR HE2 H N N 532 TYR HH H N N 533 TYR HXT H N N 534 VAL N N N N 535 VAL CA C N S 536 VAL C C N N 537 VAL O O N N 538 VAL CB C N N 539 VAL CG1 C N N 540 VAL CG2 C N N 541 VAL OXT O N N 542 VAL H H N N 543 VAL H2 H N N 544 VAL HA H N N 545 VAL HB H N N 546 VAL HG11 H N N 547 VAL HG12 H N N 548 VAL HG13 H N N 549 VAL HG21 H N N 550 VAL HG22 H N N 551 VAL HG23 H N N 552 VAL HXT H N N 553 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TTP PA O1A doub N N 455 TTP PA O2A sing N N 456 TTP PA O3A sing N N 457 TTP PA "O5'" sing N N 458 TTP O2A HOA2 sing N N 459 TTP O3A PB sing N N 460 TTP PB O1B doub N N 461 TTP PB O2B sing N N 462 TTP PB O3B sing N N 463 TTP O2B HOB2 sing N N 464 TTP O3B PG sing N N 465 TTP PG O1G doub N N 466 TTP PG O2G sing N N 467 TTP PG O3G sing N N 468 TTP O2G HOG2 sing N N 469 TTP O3G HOG3 sing N N 470 TTP "O5'" "C5'" sing N N 471 TTP "C5'" "C4'" sing N N 472 TTP "C5'" "H5'1" sing N N 473 TTP "C5'" "H5'2" sing N N 474 TTP "C4'" "O4'" sing N N 475 TTP "C4'" "C3'" sing N N 476 TTP "C4'" "H4'" sing N N 477 TTP "O4'" "C1'" sing N N 478 TTP "C3'" "O3'" sing N N 479 TTP "C3'" "C2'" sing N N 480 TTP "C3'" "H3'" sing N N 481 TTP "O3'" "HO3'" sing N N 482 TTP "C2'" "C1'" sing N N 483 TTP "C2'" "H2'1" sing N N 484 TTP "C2'" "H2'2" sing N N 485 TTP "C1'" N1 sing N N 486 TTP "C1'" "H1'" sing N N 487 TTP N1 C2 sing N N 488 TTP N1 C6 sing N N 489 TTP C2 O2 doub N N 490 TTP C2 N3 sing N N 491 TTP N3 C4 sing N N 492 TTP N3 HN3 sing N N 493 TTP C4 O4 doub N N 494 TTP C4 C5 sing N N 495 TTP C5 C5M sing N N 496 TTP C5 C6 doub N N 497 TTP C5M HM51 sing N N 498 TTP C5M HM52 sing N N 499 TTP C5M HM53 sing N N 500 TTP C6 H6 sing N N 501 TYR N CA sing N N 502 TYR N H sing N N 503 TYR N H2 sing N N 504 TYR CA C sing N N 505 TYR CA CB sing N N 506 TYR CA HA sing N N 507 TYR C O doub N N 508 TYR C OXT sing N N 509 TYR CB CG sing N N 510 TYR CB HB2 sing N N 511 TYR CB HB3 sing N N 512 TYR CG CD1 doub Y N 513 TYR CG CD2 sing Y N 514 TYR CD1 CE1 sing Y N 515 TYR CD1 HD1 sing N N 516 TYR CD2 CE2 doub Y N 517 TYR CD2 HD2 sing N N 518 TYR CE1 CZ doub Y N 519 TYR CE1 HE1 sing N N 520 TYR CE2 CZ sing Y N 521 TYR CE2 HE2 sing N N 522 TYR CZ OH sing N N 523 TYR OH HH sing N N 524 TYR OXT HXT sing N N 525 VAL N CA sing N N 526 VAL N H sing N N 527 VAL N H2 sing N N 528 VAL CA C sing N N 529 VAL CA CB sing N N 530 VAL CA HA sing N N 531 VAL C O doub N N 532 VAL C OXT sing N N 533 VAL CB CG1 sing N N 534 VAL CB CG2 sing N N 535 VAL CB HB sing N N 536 VAL CG1 HG11 sing N N 537 VAL CG1 HG12 sing N N 538 VAL CG1 HG13 sing N N 539 VAL CG2 HG21 sing N N 540 VAL CG2 HG22 sing N N 541 VAL CG2 HG23 sing N N 542 VAL OXT HXT sing N N 543 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9DDR 'double helix' 9DDR 'a-form double helix' 9DDR 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 5 1_555 B DC 18 10_665 -0.123 -0.308 0.097 7.084 0.732 2.632 1 B_DG5:DC18_B B 5 ? B 18 ? 19 1 1 B DG 6 1_555 B DC 17 10_665 -0.027 -0.126 0.255 -4.517 -15.613 -0.978 2 B_DG6:DC17_B B 6 ? B 17 ? 19 1 1 B DG 7 1_555 B DC 16 10_665 -0.133 -0.154 0.066 -14.921 -18.969 3.753 3 B_DG7:DC16_B B 7 ? B 16 ? 19 1 1 B DT 8 1_555 B DA 15 10_665 -0.218 -0.003 0.051 -6.604 -3.320 -0.504 4 B_DT8:DA15_B B 8 ? B 15 ? 20 1 1 B DC 9 1_555 B DG 14 10_665 0.339 -0.367 -0.295 -3.392 1.002 -1.756 5 B_DC9:DG14_B B 9 ? B 14 ? 19 1 1 B DC 10 1_555 B DG 13 10_665 -0.352 -0.170 0.383 -9.142 -8.300 2.249 6 B_DC10:DG13_B B 10 ? B 13 ? 19 1 1 B DT 11 1_555 B DA 12 10_665 -0.101 0.125 0.328 -12.904 -10.219 6.898 7 B_DT11:DA12_B B 11 ? B 12 ? 20 1 1 B DA 12 1_555 B DT 11 10_665 0.101 0.125 0.328 12.904 -10.219 6.898 8 B_DA12:DT11_B B 12 ? B 11 ? 20 1 1 B DG 13 1_555 B DC 10 10_665 0.352 -0.170 0.383 9.142 -8.300 2.249 9 B_DG13:DC10_B B 13 ? B 10 ? 19 1 1 B DG 14 1_555 B DC 9 10_665 -0.339 -0.367 -0.295 3.392 1.002 -1.756 10 B_DG14:DC9_B B 14 ? B 9 ? 19 1 1 B DA 15 1_555 B DT 8 10_665 0.218 -0.003 0.051 6.604 -3.320 -0.504 11 B_DA15:DT8_B B 15 ? B 8 ? 20 1 1 B DC 16 1_555 B DG 7 10_665 0.133 -0.154 0.066 14.921 -18.969 3.753 12 B_DC16:DG7_B B 16 ? B 7 ? 19 1 1 B DC 17 1_555 B DG 6 10_665 0.027 -0.126 0.255 4.517 -15.613 -0.978 13 B_DC17:DG6_B B 17 ? B 6 ? 19 1 1 B DC 18 1_555 B DG 5 10_665 0.123 -0.308 0.097 -7.084 0.732 2.632 14 B_DC18:DG5_B B 18 ? B 5 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 5 1_555 B DC 18 10_665 B DG 6 1_555 B DC 17 10_665 0.392 -1.604 3.656 -2.829 2.745 23.849 -4.777 -1.913 3.384 6.584 6.786 24.167 1 BB_DG5DG6:DC17DC18_BB B 5 ? B 18 ? B 6 ? B 17 ? 1 B DG 6 1_555 B DC 17 10_665 B DG 7 1_555 B DC 16 10_665 0.528 -1.783 3.466 4.389 8.489 33.198 -4.328 -0.206 2.977 14.487 -7.491 34.509 2 BB_DG6DG7:DC16DC17_BB B 6 ? B 17 ? B 7 ? B 16 ? 1 B DG 7 1_555 B DC 16 10_665 B DT 8 1_555 B DA 15 10_665 -0.675 -1.116 3.067 1.836 1.847 32.444 -2.289 1.501 2.959 3.299 -3.280 32.545 3 BB_DG7DT8:DA15DC16_BB B 7 ? B 16 ? B 8 ? B 15 ? 1 B DT 8 1_555 B DA 15 10_665 B DC 9 1_555 B DG 14 10_665 0.352 -0.515 3.272 3.743 4.940 34.878 -1.570 -0.031 3.191 8.161 -6.184 35.408 4 BB_DT8DC9:DG14DA15_BB B 8 ? B 15 ? B 9 ? B 14 ? 1 B DC 9 1_555 B DG 14 10_665 B DC 10 1_555 B DG 13 10_665 -0.234 -0.841 3.491 -5.460 0.822 31.538 -1.685 -0.631 3.459 1.499 9.950 32.006 5 BB_DC9DC10:DG13DG14_BB B 9 ? B 14 ? B 10 ? B 13 ? 1 B DC 10 1_555 B DG 13 10_665 B DT 11 1_555 B DA 12 10_665 -0.507 -0.732 3.479 1.800 -2.158 30.635 -0.929 1.332 3.486 -4.074 -3.398 30.760 6 BB_DC10DT11:DA12DG13_BB B 10 ? B 13 ? B 11 ? B 12 ? 1 B DT 11 1_555 B DA 12 10_665 B DA 12 1_555 B DT 11 10_665 0.000 1.167 2.680 0.000 4.697 36.853 1.305 0.000 2.803 7.393 0.000 37.141 7 BB_DT11DA12:DT11DA12_BB B 11 ? B 12 ? B 12 ? B 11 ? 1 B DA 12 1_555 B DT 11 10_665 B DG 13 1_555 B DC 10 10_665 0.507 -0.732 3.479 -1.800 -2.158 30.635 -0.929 -1.332 3.486 -4.074 3.398 30.760 8 BB_DA12DG13:DC10DT11_BB B 12 ? B 11 ? B 13 ? B 10 ? 1 B DG 13 1_555 B DC 10 10_665 B DG 14 1_555 B DC 9 10_665 0.234 -0.841 3.491 5.460 0.822 31.538 -1.685 0.631 3.459 1.499 -9.950 32.006 9 BB_DG13DG14:DC9DC10_BB B 13 ? B 10 ? B 14 ? B 9 ? 1 B DG 14 1_555 B DC 9 10_665 B DA 15 1_555 B DT 8 10_665 -0.352 -0.515 3.272 -3.743 4.940 34.878 -1.570 0.031 3.191 8.161 6.184 35.408 10 BB_DG14DA15:DT8DC9_BB B 14 ? B 9 ? B 15 ? B 8 ? 1 B DA 15 1_555 B DT 8 10_665 B DC 16 1_555 B DG 7 10_665 0.675 -1.116 3.067 -1.836 1.847 32.444 -2.289 -1.501 2.959 3.299 3.280 32.545 11 BB_DA15DC16:DG7DT8_BB B 15 ? B 8 ? B 16 ? B 7 ? 1 B DC 16 1_555 B DG 7 10_665 B DC 17 1_555 B DG 6 10_665 -0.528 -1.783 3.466 -4.389 8.489 33.198 -4.328 0.206 2.977 14.487 7.491 34.509 12 BB_DC16DC17:DG6DG7_BB B 16 ? B 7 ? B 17 ? B 6 ? 1 B DC 17 1_555 B DG 6 10_665 B DC 18 1_555 B DG 5 10_665 -0.392 -1.604 3.656 2.829 2.745 23.849 -4.777 1.913 3.384 6.584 -6.786 24.167 13 BB_DC17DC18:DG5DG6_BB B 17 ? B 6 ? B 18 ? B 5 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM081433 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2FLL _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'P 65 2 2' _space_group.name_Hall 'P 65 2 (x,y,z+1/12)' _space_group.IT_number 179 _space_group.crystal_system hexagonal _space_group.id 1 # _atom_sites.entry_id 9DDR _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.010251 _atom_sites.fract_transf_matrix[1][2] 0.005918 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011836 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004947 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? CA ? ? 16.26893 3.65395 ? ? 3.58509 77.28589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.51345 0.48472 ? ? 24.73122 6.32584 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O1- ? ? 5.12366 3.84317 ? ? 3.49406 27.47979 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ #