data_0YT
#

_chem_comp.id                                   0YT
_chem_comp.name                                 2-acetamido-2-deoxy-5-thio-beta-D-glucopyranose
_chem_comp.type                                 "D-saccharide, beta linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C8 H15 N O5 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;2-(acetylamino)-2-deoxy-5-thio-beta-D-glucopyranose; 2-acetamido-2-deoxy-5-thio-beta-D-glucose;
2-acetamido-2-deoxy-5-thio-D-glucose; 2-acetamido-2-deoxy-5-thio-glucose
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2012-09-18
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       237.273
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    0YT
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4GZ3
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  0YT  "2-(acetylamino)-2-deoxy-5-thio-beta-D-glucopyranose"  PDB  ?  
2  0YT  2-acetamido-2-deoxy-5-thio-beta-D-glucose              PDB  ?  
3  0YT  2-acetamido-2-deoxy-5-thio-D-glucose                   PDB  ?  
4  0YT  2-acetamido-2-deoxy-5-thio-glucose                     PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
0YT  C1   C1   C  0  1  N  N  R  -21.524  27.165  6.038  -0.524   1.120   0.731  C1   0YT   1  
0YT  C2   C2   C  0  1  N  N  R  -22.882  27.781  5.693  -0.840  -0.199   0.021  C2   0YT   2  
0YT  N2   N2   N  0  1  N  N  N  -22.966  29.175  6.100  -2.205  -0.614   0.353  N2   0YT   3  
0YT  C7   C7   C  0  1  N  N  N  -23.201  30.214  5.216  -3.247  -0.132  -0.353  C7   0YT   4  
0YT  O7   O7   O  0  1  N  N  N  -23.315  30.030  4.050  -3.055   0.645  -1.264  O7   0YT   5  
0YT  C8   C8   C  0  1  N  N  N  -23.287  31.628  5.807  -4.652  -0.560  -0.012  C8   0YT   6  
0YT  C3   C3   C  0  1  N  N  R  -24.070  26.944  6.230   0.140  -1.279   0.467  C3   0YT   7  
0YT  O3   O3   O  0  1  N  N  N  -25.295  27.520  5.768  -0.316  -2.551   0.002  O3   0YT   8  
0YT  C4   C4   C  0  1  N  N  S  -24.009  25.421  5.924   1.533  -1.009  -0.095  C4   0YT   9  
0YT  O4   O4   O  0  1  N  N  N  -25.162  24.841  6.397   2.362  -2.152   0.123  O4   0YT  10  
0YT  C5   C5   C  0  1  N  N  R  -22.816  24.728  6.563   2.151   0.207   0.600  C5   0YT  11  
0YT  C6   C6   C  0  1  N  N  N  -22.793  23.218  6.341   3.574   0.425   0.082  C6   0YT  12  
0YT  O6   O6   O  0  1  N  N  N  -23.147  22.770  5.091   3.551   0.535  -1.342  O6   0YT  13  
0YT  S5   S5   S  0  1  N  N  N  -21.368  25.378  5.804   1.136   1.672   0.238  S5   0YT  14  
0YT  H3   H3   H  0  1  N  N  N  -22.963  27.757  4.596  -0.757  -0.059  -1.057  H3   0YT  15  
0YT  H4   H4   H  0  1  N  N  N  -22.848  29.394  7.069  -2.359  -1.237   1.081  H4   0YT  16  
0YT  H5   H5   H  0  1  N  N  N  -23.459  32.354  4.999  -4.626  -1.256   0.827  H5   0YT  17  
0YT  H6   H6   H  0  1  N  N  N  -24.119  31.675  6.525  -5.242   0.315   0.260  H6   0YT  18  
0YT  H7   H7   H  0  1  N  N  N  -22.345  31.868  6.321  -5.103  -1.049  -0.875  H7   0YT  19  
0YT  H8   H8   H  0  1  N  N  N  -24.046  27.040  7.326   0.190  -1.292   1.556  H8   0YT  20  
0YT  H9   H9   H  0  1  N  N  N  -26.028  27.011  6.094   0.258  -3.289   0.247  H9   0YT  21  
0YT  H10  H10  H  0  1  N  N  N  -23.938  25.297  4.833   1.460  -0.814  -1.165  H10  0YT  22  
0YT  H11  H11  H  0  1  N  N  N  -25.144  23.908  6.219   3.265  -2.053  -0.210  H11  0YT  23  
0YT  H12  H12  H  0  1  N  N  N  -22.763  24.960  7.637   2.175   0.039   1.676  H12  0YT  24  
0YT  H13  H13  H  0  1  N  N  N  -21.770  22.868  6.543   3.980   1.341   0.511  H13  0YT  25  
0YT  H14  H14  H  0  1  N  N  N  -23.485  22.765  7.065   4.199  -0.420   0.371  H14  0YT  26  
0YT  H15  H15  H  0  1  N  N  N  -23.097  21.822  5.068   4.422   0.675  -1.740  H15  0YT  27  
0YT  O1   O1   O  0  1  N  Y  N  -20.660  27.822  5.107  -1.487   2.108   0.358  O1   0YT  28  
0YT  H1   H1   H  0  1  N  Y  N  -21.253  27.384  7.081  -0.554   0.970   1.810  H1   0YT  29  
0YT  H2   H2   H  0  1  N  N  N  -19.770  27.514  5.228  -1.344   2.971   0.769  H2   0YT  30  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
0YT  C2  C1   SING  N  N   1  
0YT  C2  N2   SING  N  N   2  
0YT  C2  C3   SING  N  N   3  
0YT  C2  H3   SING  N  N   4  
0YT  N2  H4   SING  N  N   5  
0YT  C7  C8   SING  N  N   6  
0YT  C7  N2   SING  N  N   7  
0YT  O7  C7   DOUB  N  N   8  
0YT  C8  H5   SING  N  N   9  
0YT  C8  H6   SING  N  N  10  
0YT  C8  H7   SING  N  N  11  
0YT  C3  H8   SING  N  N  12  
0YT  O3  C3   SING  N  N  13  
0YT  O3  H9   SING  N  N  14  
0YT  C4  C3   SING  N  N  15  
0YT  C4  O4   SING  N  N  16  
0YT  C4  C5   SING  N  N  17  
0YT  C4  H10  SING  N  N  18  
0YT  O4  H11  SING  N  N  19  
0YT  C5  H12  SING  N  N  20  
0YT  C6  C5   SING  N  N  21  
0YT  C6  H13  SING  N  N  22  
0YT  C6  H14  SING  N  N  23  
0YT  O6  C6   SING  N  N  24  
0YT  O6  H15  SING  N  N  25  
0YT  S5  C1   SING  N  N  26  
0YT  S5  C5   SING  N  N  27  
0YT  C1  O1   SING  N  N  28  
0YT  C1  H1   SING  N  N  29  
0YT  O1  H2   SING  N  N  30  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
0YT  SMILES            ACDLabs               12.01  "O=C(NC1C(O)C(O)C(SC1O)CO)C"  
0YT  InChI             InChI                 1.03   "InChI=1S/C8H15NO5S/c1-3(11)9-5-7(13)6(12)4(2-10)15-8(5)14/h4-8,10,12-14H,2H2,1H3,(H,9,11)/t4-,5-,6-,7-,8-/m1/s1"  
0YT  InChIKey          InChI                 1.03   DYCCLPFFILCZGU-FMDGEEDCSA-N  
0YT  SMILES_CANONICAL  CACTVS                3.370  "CC(=O)N[C@H]1[C@H](O)S[C@H](CO)[C@@H](O)[C@@H]1O"  
0YT  SMILES            CACTVS                3.370  "CC(=O)N[CH]1[CH](O)S[CH](CO)[CH](O)[CH]1O"  
0YT  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "CC(=O)NC1C(C(C(SC1O)CO)O)O"  
0YT  SMILES            "OpenEye OEToolkits"  1.7.6  "CC(=O)NC1C(C(C(SC1O)CO)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
0YT  "SYSTEMATIC NAME"  ACDLabs               12.01  "2-(acetylamino)-2-deoxy-5-thio-beta-D-glucopyranose"  
0YT  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "N-[6-(hydroxymethyl)-2,4,5-tris(oxidanyl)thian-3-yl]ethanamide"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
0YT  "CARBOHYDRATE ISOMER"                  D             PDB  ?  
0YT  "CARBOHYDRATE RING"                    thiopyranose  PDB  ?  
0YT  "CARBOHYDRATE ANOMER"                  beta          PDB  ?  
0YT  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose        PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
0YT  "Create component"     2012-09-18  RCSB  
0YT  "Initial release"      2012-10-26  RCSB  
0YT  "Other modification"   2020-07-03  RCSB  
0YT  "Modify name"          2020-07-17  RCSB  
0YT  "Modify synonyms"      2020-07-17  RCSB  
0YT  "Modify linking type"  2020-07-17  RCSB  
##
