data_2LV
#

_chem_comp.id                                   2LV
_chem_comp.name                                 "N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S,3S)-2-hydroxy-5-methyl-1-oxo-1-(phenylamino)hexan-3-yl]-L-leucinamide"
_chem_comp.type                                 peptide-like
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C33 H48 N4 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "PHQ-Leu-Leu-Leu-ketoamide, bound form"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2013-11-29
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       596.757
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    2LV
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4NO8
_chem_comp.pdbx_subcomponent_list               "PHQ LEU LEU L3O ANL"
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
2LV  C7   C7   C  0  1  N  N  N  10.891  -137.120  22.014   -5.525  -0.475   0.593  C1    PHQ   1  
2LV  O8   O8   O  0  1  N  N  N  11.371  -138.232  21.784   -5.510  -1.201   1.568  O1    PHQ   2  
2LV  O6   O6   O  0  1  N  N  N  11.168  -136.475  23.187   -6.698  -0.103   0.048  O2    PHQ   3  
2LV  C5   C5   C  0  1  N  N  N  12.554  -136.417  23.576   -7.906  -0.608   0.677  C2    PHQ   4  
2LV  C4   C4   C  0  1  Y  N  N  12.645  -136.554  24.966   -9.112  -0.091  -0.065  C3    PHQ   5  
2LV  C3   C3   C  0  1  Y  N  N  12.296  -137.764  25.571   -9.636  -0.814  -1.121  C4    PHQ   6  
2LV  C2   C2   C  0  1  Y  N  N  12.381  -137.915  26.955  -10.742  -0.340  -1.801  C5    PHQ   7  
2LV  C1   C1   C  0  1  Y  N  N  12.817  -136.850  27.742  -11.324   0.856  -1.426  C6    PHQ   8  
2LV  C43  C43  C  0  1  Y  N  N  13.166  -135.640  27.144  -10.800   1.579  -0.370  C7    PHQ   9  
2LV  C42  C42  C  0  1  Y  N  N  13.081  -135.490  25.759   -9.697   1.102   0.314  C8    PHQ  10  
2LV  N9   N9   N  0  1  N  N  N  10.061  -136.541  21.126   -4.366  -0.036   0.062  N     LEU  11  
2LV  C10  C10  C  0  1  N  N  S   9.691  -137.197  19.859   -3.089  -0.440   0.655  CA    LEU  12  
2LV  C15  C15  C  0  1  N  N  N  10.781  -137.012  18.806   -2.037   0.589   0.332  C     LEU  13  
2LV  O41  O41  O  0  1  N  N  N  11.462  -135.989  18.765   -2.326   1.564  -0.329  O     LEU  14  
2LV  C11  C11  C  0  1  N  N  N   8.399  -136.593  19.292   -2.668  -1.796   0.085  CB    LEU  15  
2LV  C12  C12  C  0  1  N  N  N   7.214  -136.771  20.248   -3.672  -2.866   0.519  CG    LEU  16  
2LV  C13  C13  C  0  1  N  N  N   5.953  -136.228  19.570   -3.322  -4.196  -0.152  CD1   LEU  17  
2LV  C14  C14  C  0  1  N  N  N   7.004  -138.247  20.605   -3.616  -3.031   2.039  CD2   LEU  18  
2LV  N16  N16  N  0  1  N  N  N  10.883  -138.038  17.948   -0.775   0.426   0.777  N     LEU  19  
2LV  C17  C17  C  0  1  N  N  S  11.836  -138.063  16.833    0.271   1.368   0.372  CA    LEU  20  
2LV  C22  C22  C  0  1  N  N  N  11.004  -138.086  15.554    1.602   0.660   0.349  C     LEU  21  
2LV  O23  O23  O  0  1  N  N  N   9.998  -138.789  15.489    1.739  -0.393   0.936  O     LEU  22  
2LV  C18  C18  C  0  1  N  N  N  12.689  -139.337  16.929    0.328   2.527   1.369  CB    LEU  23  
2LV  C19  C19  C  0  1  N  N  N  14.159  -138.990  17.194    1.329   3.575   0.876  CG    LEU  24  
2LV  C20  C20  C  0  1  N  N  N  14.339  -138.476  18.633    0.826   4.183  -0.434  CD1   LEU  25  
2LV  C21  C21  C  0  1  N  N  N  15.012  -140.247  16.978    1.473   4.676   1.928  CD2   LEU  26  
2LV  C30  C30  C  0  1  N  N  S  11.229  -138.366  12.329    5.049   1.442  -0.658  CZ    L3O  27  
2LV  O31  O31  O  0  1  N  N  N  10.760  -139.623  12.823    4.880   2.099  -1.916  OZ    L3O  28  
2LV  C25  C25  C  0  1  N  N  S  10.698  -137.259  13.272    3.899   0.458  -0.438  CA    L3O  29  
2LV  C26  C26  C  0  1  N  N  N  10.803  -135.898  12.610    3.818  -0.506  -1.624  CB    L3O  30  
2LV  C27  C27  C  0  1  N  N  N  10.264  -134.797  13.563    2.750  -1.566  -1.348  CG    L3O  31  
2LV  C28  C28  C  0  1  N  N  N  10.154  -133.506  12.788    2.582  -2.454  -2.583  CD1   L3O  32  
2LV  C29  C29  C  0  1  N  N  N   8.881  -135.094  14.110    3.181  -2.425  -0.158  CD2   L3O  33  
2LV  N24  N24  N  0  1  N  N  N  11.430  -137.302  14.551    2.639   1.197  -0.323  N     L3O  34  
2LV  C32  C32  C  0  1  N  N  N  12.778  -138.409  12.293    6.358   0.694  -0.654  C     L3O  35  
2LV  O33  O33  O  0  1  N  N  N  13.438  -137.374  12.205    7.032   0.646  -1.661  O     L3O  36  
2LV  C35  C35  C  0  1  Y  N  N  14.631  -139.846  12.309    8.041  -0.522   0.506  C1    ANL  37  
2LV  C36  C36  C  0  1  Y  N  N  15.478  -139.206  11.394    8.238  -1.683   1.244  C2    ANL  38  
2LV  C37  C37  C  0  1  Y  N  N  16.849  -139.457  11.416    9.486  -2.274   1.278  C3    ANL  39  
2LV  C38  C38  C  0  1  Y  N  N  17.381  -140.356  12.340   10.539  -1.712   0.580  C4    ANL  40  
2LV  C39  C39  C  0  1  Y  N  N  16.540  -141.002  13.246   10.346  -0.556  -0.156  C5    ANL  41  
2LV  C40  C40  C  0  1  Y  N  N  15.171  -140.750  13.224    9.099   0.036  -0.200  C6    ANL  42  
2LV  N34  N34  N  0  1  N  N  N  13.305  -139.655  12.334    6.779   0.079   0.469  N     ANL  43  
2LV  H1   H1   H  0  1  N  N  N  13.108  -137.233  23.088   -7.902  -1.698   0.649  H21   PHQ  44  
2LV  H2   H2   H  0  1  N  N  N  12.982  -135.450  23.272   -7.945  -0.271   1.712  H22   PHQ  45  
2LV  H19  H19  H  0  1  N  N  N  11.958  -138.589  24.962   -9.181  -1.749  -1.414  H41   PHQ  46  
2LV  H20  H20  H  0  1  N  N  N  12.110  -138.854  27.415  -11.151  -0.904  -2.626  H51   PHQ  47  
2LV  H21  H21  H  0  1  N  N  N  12.884  -136.962  28.814  -12.188   1.227  -1.957  H61   PHQ  48  
2LV  H22  H22  H  0  1  N  N  N  13.503  -134.816  27.755  -11.255   2.513  -0.077  H71   PHQ  49  
2LV  H23  H23  H  0  1  N  N  N  13.352  -134.551  25.300   -9.290   1.664   1.141  H81   PHQ  50  
2LV  H24  H24  H  0  1  N  N  N   9.684  -135.638  21.332   -4.378   0.546  -0.714  H     LEU  51  
2LV  H3   H3   H  0  1  N  N  N   9.537  -138.273  20.029   -3.200  -0.520   1.737  HA    LEU  52  
2LV  H25  H25  H  0  1  N  N  N   8.556  -135.518  19.117   -2.644  -1.741  -1.003  HB2   LEU  53  
2LV  H26  H26  H  0  1  N  N  N   8.164  -137.089  18.339   -1.677  -2.055   0.458  HB3   LEU  54  
2LV  H27  H27  H  0  1  N  N  N   7.404  -136.200  21.169   -4.676  -2.563   0.223  HG    LEU  55  
2LV  H4   H4   H  0  1  N  N  N   5.092  -136.349  20.244   -2.318  -4.499   0.144  HD11  LEU  56  
2LV  H5   H5   H  0  1  N  N  N   6.091  -135.161  19.339   -4.037  -4.958   0.157  HD12  LEU  57  
2LV  H6   H6   H  0  1  N  N  N   5.769  -136.784  18.639   -3.362  -4.078  -1.235  HD13  LEU  58  
2LV  H28  H28  H  0  1  N  N  N   6.149  -138.341  21.290   -2.612  -3.334   2.335  HD21  LEU  59  
2LV  H29  H29  H  0  1  N  N  N   6.804  -138.821  19.688   -3.866  -2.084   2.517  HD22  LEU  60  
2LV  H30  H30  H  0  1  N  N  N   7.909  -138.639  21.092   -4.332  -3.793   2.348  HD23  LEU  61  
2LV  H31  H31  H  0  1  N  N  N  10.279  -138.825  18.075   -0.561  -0.314   1.366  H     LEU  62  
2LV  H7   H7   H  0  1  N  N  N  12.484  -137.174  16.848    0.048   1.754  -0.622  HA    LEU  63  
2LV  H32  H32  H  0  1  N  N  N  12.312  -139.962  17.752   -0.660   2.980   1.455  HB2   LEU  64  
2LV  H33  H33  H  0  1  N  N  N  12.615  -139.893  15.983    0.643   2.154   2.343  HB3   LEU  65  
2LV  H34  H34  H  0  1  N  N  N  14.480  -138.209  16.489    2.297   3.102   0.709  HG    LEU  66  
2LV  H8   H8   H  0  1  N  N  N  15.398  -138.232  18.806   -0.102   4.726  -0.251  HD11  LEU  67  
2LV  H9   H9   H  0  1  N  N  N  13.726  -137.574  18.779    1.576   4.869  -0.828  HD12  LEU  68  
2LV  H10  H10  H  0  1  N  N  N  14.021  -139.254  19.343    0.645   3.389  -1.158  HD13  LEU  69  
2LV  H11  H11  H  0  1  N  N  N  16.070  -140.010  17.166    1.831   4.243   2.862  HD21  LEU  70  
2LV  H12  H12  H  0  1  N  N  N  14.685  -141.036  17.671    2.186   5.423   1.577  HD22  LEU  71  
2LV  H13  H13  H  0  1  N  N  N  14.893  -140.597  15.942    0.505   5.149   2.095  HD23  LEU  72  
2LV  H41  H41  H  0  1  N  N  N  10.852  -138.183  11.312    5.051   2.183   0.142  HZ    L3O  73  
2LV  H42  H42  H  0  1  N  N  N  10.463  -139.520  13.719    4.869   1.500  -2.674  HA    L3O  74  
2LV  H36  H36  H  0  1  N  N  N   9.635  -137.465  13.467    4.074  -0.107   0.477  HB    L3O  75  
2LV  H14  H14  H  0  1  N  N  N  11.857  -135.689  12.372    3.556   0.048  -2.526  HB1C  L3O  76  
2LV  H15  H15  H  0  1  N  N  N  10.211  -135.898  11.683    4.784  -0.991  -1.765  HB2C  L3O  77  
2LV  H35  H35  H  0  1  N  N  N  12.250  -136.743  14.672    2.552   2.072  -0.731  HN1   L3O  78  
2LV  H37  H37  H  0  1  N  N  N  10.969  -134.668  14.397    1.803  -1.077  -1.121  HG    L3O  79  
2LV  H16  H16  H  0  1  N  N  N   9.773  -132.713  13.448    3.530  -2.943  -2.811  HD11  L3O  80  
2LV  H17  H17  H  0  1  N  N  N  11.146  -133.221  12.408    1.821  -3.209  -2.387  HD12  L3O  81  
2LV  H18  H18  H  0  1  N  N  N   9.463  -133.643  11.943    2.276  -1.842  -3.432  HD13  L3O  82  
2LV  H38  H38  H  0  1  N  N  N   8.565  -134.276  14.774    4.128  -2.914  -0.385  HD21  L3O  83  
2LV  H39  H39  H  0  1  N  N  N   8.169  -135.185  13.276    3.300  -1.793   0.722  HD22  L3O  84  
2LV  H40  H40  H  0  1  N  N  N   8.906  -136.037  14.676    2.420  -3.181   0.039  HD23  L3O  85  
2LV  H44  H44  H  0  1  N  N  N  15.068  -138.517  10.671    7.417  -2.122   1.790  H2    ANL  86  
2LV  H45  H45  H  0  1  N  N  N  17.500  -138.954  10.716    9.640  -3.176   1.852  H3    ANL  87  
2LV  H46  H46  H  0  1  N  N  N  18.443  -140.552  12.354   11.514  -2.176   0.608  H4    ANL  88  
2LV  H47  H47  H  0  1  N  N  N  16.950  -141.697  13.964   11.170  -0.119  -0.700  H5    ANL  89  
2LV  H48  H48  H  0  1  N  N  N  14.522  -141.259  13.921    8.948   0.936  -0.778  H6    ANL  90  
2LV  H43  H43  H  0  1  N  N  N  12.695  -140.446  12.384    6.206   0.053   1.252  HN1   ANL  91  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
2LV  C36  C37  DOUB  Y  N   1  
2LV  C36  C35  SING  Y  N   2  
2LV  C37  C38  SING  Y  N   3  
2LV  O33  C32  DOUB  N  N   4  
2LV  C32  C30  SING  N  N   5  
2LV  C32  N34  SING  N  N   6  
2LV  C35  N34  SING  N  N   7  
2LV  C35  C40  DOUB  Y  N   8  
2LV  C30  O31  SING  N  N   9  
2LV  C30  C25  SING  N  N  10  
2LV  C38  C39  DOUB  Y  N  11  
2LV  C26  C25  SING  N  N  12  
2LV  C26  C27  SING  N  N  13  
2LV  C28  C27  SING  N  N  14  
2LV  C40  C39  SING  Y  N  15  
2LV  C25  N24  SING  N  N  16  
2LV  C27  C29  SING  N  N  17  
2LV  N24  C22  SING  N  N  18  
2LV  O23  C22  DOUB  N  N  19  
2LV  C22  C17  SING  N  N  20  
2LV  C17  C18  SING  N  N  21  
2LV  C17  N16  SING  N  N  22  
2LV  C18  C19  SING  N  N  23  
2LV  C21  C19  SING  N  N  24  
2LV  C19  C20  SING  N  N  25  
2LV  N16  C15  SING  N  N  26  
2LV  O41  C15  DOUB  N  N  27  
2LV  C15  C10  SING  N  N  28  
2LV  C11  C10  SING  N  N  29  
2LV  C11  C12  SING  N  N  30  
2LV  C13  C12  SING  N  N  31  
2LV  C10  N9   SING  N  N  32  
2LV  C12  C14  SING  N  N  33  
2LV  N9   C7   SING  N  N  34  
2LV  O8   C7   DOUB  N  N  35  
2LV  C7   O6   SING  N  N  36  
2LV  O6   C5   SING  N  N  37  
2LV  C5   C4   SING  N  N  38  
2LV  C4   C3   DOUB  Y  N  39  
2LV  C4   C42  SING  Y  N  40  
2LV  C3   C2   SING  Y  N  41  
2LV  C42  C43  DOUB  Y  N  42  
2LV  C2   C1   DOUB  Y  N  43  
2LV  C43  C1   SING  Y  N  44  
2LV  C5   H1   SING  N  N  45  
2LV  C5   H2   SING  N  N  46  
2LV  C10  H3   SING  N  N  47  
2LV  C13  H4   SING  N  N  48  
2LV  C13  H5   SING  N  N  49  
2LV  C13  H6   SING  N  N  50  
2LV  C17  H7   SING  N  N  51  
2LV  C20  H8   SING  N  N  52  
2LV  C20  H9   SING  N  N  53  
2LV  C20  H10  SING  N  N  54  
2LV  C21  H11  SING  N  N  55  
2LV  C21  H12  SING  N  N  56  
2LV  C21  H13  SING  N  N  57  
2LV  C26  H14  SING  N  N  58  
2LV  C26  H15  SING  N  N  59  
2LV  C28  H16  SING  N  N  60  
2LV  C28  H17  SING  N  N  61  
2LV  C28  H18  SING  N  N  62  
2LV  C3   H19  SING  N  N  63  
2LV  C2   H20  SING  N  N  64  
2LV  C1   H21  SING  N  N  65  
2LV  C43  H22  SING  N  N  66  
2LV  C42  H23  SING  N  N  67  
2LV  N9   H24  SING  N  N  68  
2LV  C11  H25  SING  N  N  69  
2LV  C11  H26  SING  N  N  70  
2LV  C12  H27  SING  N  N  71  
2LV  C14  H28  SING  N  N  72  
2LV  C14  H29  SING  N  N  73  
2LV  C14  H30  SING  N  N  74  
2LV  N16  H31  SING  N  N  75  
2LV  C18  H32  SING  N  N  76  
2LV  C18  H33  SING  N  N  77  
2LV  C19  H34  SING  N  N  78  
2LV  N24  H35  SING  N  N  79  
2LV  C25  H36  SING  N  N  80  
2LV  C27  H37  SING  N  N  81  
2LV  C29  H38  SING  N  N  82  
2LV  C29  H39  SING  N  N  83  
2LV  C29  H40  SING  N  N  84  
2LV  C30  H41  SING  N  N  85  
2LV  O31  H42  SING  N  N  86  
2LV  N34  H43  SING  N  N  87  
2LV  C36  H44  SING  N  N  88  
2LV  C37  H45  SING  N  N  89  
2LV  C38  H46  SING  N  N  90  
2LV  C39  H47  SING  N  N  91  
2LV  C40  H48  SING  N  N  92  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
2LV  SMILES            ACDLabs               12.01  "O=C(Nc1ccccc1)C(O)C(NC(=O)C(NC(=O)C(NC(=O)OCc2ccccc2)CC(C)C)CC(C)C)CC(C)C"  
2LV  InChI             InChI                 1.03   "InChI=1S/C33H48N4O6/c1-21(2)17-26(29(38)32(41)34-25-15-11-8-12-16-25)35-30(39)27(18-22(3)4)36-31(40)28(19-23(5)6)37-33(42)43-20-24-13-9-7-10-14-24/h7-16,21-23,26-29,38H,17-20H2,1-6H3,(H,34,41)(H,35,39)(H,36,40)(H,37,42)/t26-,27-,28-,29-/m0/s1"  
2LV  InChIKey          InChI                 1.03   XUZGBFOVPMXSJC-DZUOILHNSA-N  
2LV  SMILES_CANONICAL  CACTVS                3.385  "CC(C)C[C@H](NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)OCc1ccccc1)[C@H](O)C(=O)Nc2ccccc2"  
2LV  SMILES            CACTVS                3.385  "CC(C)C[CH](NC(=O)[CH](CC(C)C)NC(=O)[CH](CC(C)C)NC(=O)OCc1ccccc1)[CH](O)C(=O)Nc2ccccc2"  
2LV  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "CC(C)C[C@@H]([C@@H](C(=O)Nc1ccccc1)O)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)OCc2ccccc2"  
2LV  SMILES            "OpenEye OEToolkits"  1.7.6  "CC(C)CC(C(C(=O)Nc1ccccc1)O)NC(=O)C(CC(C)C)NC(=O)C(CC(C)C)NC(=O)OCc2ccccc2"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
2LV  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S,3S)-2-hydroxy-5-methyl-1-oxo-1-(phenylamino)hexan-3-yl]-L-leucinamide"  
2LV  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(phenylmethyl) N-[(2S)-4-methyl-1-[[(2S)-4-methyl-1-[[(2S,3S)-5-methyl-2-oxidanyl-1-oxidanylidene-1-phenylazanyl-hexan-3-yl]amino]-1-oxidanylidene-pentan-2-yl]amino]-1-oxidanylidene-pentan-2-yl]carbamate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
2LV  "Create component"  2013-11-29  RCSB  
2LV  "Initial release"   2014-02-12  RCSB  
2LV  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     2LV
_pdbx_chem_comp_synonyms.name        "PHQ-Leu-Leu-Leu-ketoamide, bound form"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
