data_2M1
#

_chem_comp.id                                   2M1
_chem_comp.name                                 "N-[(benzyloxy)carbonyl]-L-leucyl-N-[(3S)-5-methyl-1-(methylsulfonyl)hexan-3-yl]-L-leucinamide"
_chem_comp.type                                 peptide-like
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C28 H47 N3 O6 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        PHQ-Leu-Leu-Leu-vinylsulfone
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2013-12-02
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       553.754
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    2M1
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4NO6
_chem_comp.pdbx_subcomponent_list               "PHQ LEU LEU 2M0"
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
2M1  C7   C7   C  0  1  N  N  N  11.009  -137.258  21.701   -4.585  -0.142   0.627  C1    PHQ   1  
2M1  O8   O8   O  0  1  N  N  N  11.440  -138.322  21.253   -4.608  -0.513   1.784  O1    PHQ   2  
2M1  O6   O6   O  0  1  N  N  N  11.363  -136.860  22.958   -5.714   0.295   0.038  O2    PHQ   3  
2M1  C5   C5   C  0  1  N  N  N  12.760  -136.688  23.116   -6.921   0.296   0.844  C2    PHQ   4  
2M1  C4   C4   C  0  1  Y  N  N  12.942  -136.316  24.464   -8.073   0.814   0.023  C3    PHQ   5  
2M1  C32  C32  C  0  1  Y  N  N  13.515  -135.081  24.790   -8.845  -0.063  -0.716  C4    PHQ   6  
2M1  C33  C33  C  0  1  Y  N  N  13.692  -134.718  26.126   -9.902   0.412  -1.469  C5    PHQ   7  
2M1  C1   C1   C  0  1  Y  N  N  13.301  -135.583  27.148  -10.188   1.764  -1.484  C6    PHQ   8  
2M1  C2   C2   C  0  1  Y  N  N  12.732  -136.816  26.832   -9.417   2.641  -0.744  C7    PHQ   9  
2M1  C3   C3   C  0  1  Y  N  N  12.555  -137.178  25.496   -8.362   2.166   0.013  C8    PHQ  10  
2M1  N9   N9   N  0  1  N  N  N  10.175  -136.490  20.968   -3.428  -0.164  -0.064  N     LEU  11  
2M1  C10  C10  C  0  1  N  N  S   9.715  -136.889  19.622   -2.200  -0.640   0.578  CA    LEU  12  
2M1  C15  C15  C  0  1  N  N  N  10.793  -136.688  18.561   -1.006  -0.026  -0.106  C     LEU  13  
2M1  O31  O31  O  0  1  N  N  N  11.530  -135.702  18.572   -1.165   0.734  -1.038  O     LEU  14  
2M1  C11  C11  C  0  1  N  N  N   8.493  -136.071  19.191   -2.125  -2.164   0.467  CB    LEU  15  
2M1  C12  C12  C  0  1  N  N  N   7.251  -136.423  20.019   -3.268  -2.791   1.266  CG    LEU  16  
2M1  C13  C13  C  0  1  N  N  N   6.041  -135.720  19.399   -3.268  -4.306   1.054  CD1   LEU  17  
2M1  C14  C14  C  0  1  N  N  N   6.980  -137.928  20.055   -3.079  -2.484   2.753  CD2   LEU  18  
2M1  N16  N16  N  0  1  N  N  N  10.794  -137.655  17.629    0.239  -0.322   0.317  N     LEU  19  
2M1  C17  C17  C  0  1  N  N  S  11.727  -137.693  16.505    1.400   0.274  -0.348  CA    LEU  20  
2M1  C22  C22  C  0  1  N  N  N  10.923  -137.732  15.205    2.602  -0.614  -0.153  C     LEU  21  
2M1  O23  O23  O  0  1  N  N  N  10.025  -138.555  15.051    2.499  -1.644   0.480  O     LEU  22  
2M1  C18  C18  C  0  1  N  N  N  12.531  -138.996  16.632    1.681   1.652   0.255  CB    LEU  23  
2M1  C19  C19  C  0  1  N  N  N  14.032  -138.786  16.877    0.512   2.591  -0.052  CG    LEU  24  
2M1  C20  C20  C  0  1  N  N  N  14.318  -137.678  17.901    0.734   3.929   0.654  CD1   LEU  25  
2M1  C21  C21  C  0  1  N  N  N  14.601  -140.105  17.411    0.425   2.819  -1.563  CD2   LEU  26  
2M1  C26  C26  C  0  1  N  N  N  12.891  -137.451  12.025    6.286   0.718   0.548  C26   2M0  27  
2M1  C28  C28  C  0  1  N  N  N  10.061  -134.311  13.379    3.756  -3.130  -1.376  C28   2M0  28  
2M1  C41  C41  C  0  1  N  N  N  11.371  -137.744  12.004    6.236  -0.291  -0.602  C41   2M0  29  
2M1  S42  S42  S  0  1  N  N  N  13.919  -138.967  12.149    7.799   1.710   0.416  S42   2M0  30  
2M1  O43  O43  O  0  1  N  N  N  13.996  -139.687  10.801    8.919   0.857   0.614  O43   2M0  31  
2M1  O44  O44  O  0  1  N  N  N  13.318  -139.898  13.196    7.725   2.493  -0.768  O44   2M0  32  
2M1  C45  C45  C  0  1  N  N  N  15.566  -138.516  12.653    7.651   2.812   1.849  C45   2M0  33  
2M1  C25  C25  C  0  1  N  N  S  10.619  -136.785  12.957    4.960  -1.127  -0.491  C25   2M0  34  
2M1  C27  C27  C  0  1  N  N  N  10.608  -135.352  12.381    4.969  -2.217  -1.565  C27   2M0  35  
2M1  C30  C30  C  0  1  N  N  N  10.129  -132.919  12.734    3.696  -4.142  -2.522  C30   2M0  36  
2M1  C29  C29  C  0  1  N  N  N   8.611  -134.618  13.776    3.880  -3.873  -0.045  C29   2M0  37  
2M1  N24  N24  N  0  1  N  N  N  11.273  -136.831  14.280    3.792  -0.264  -0.681  N24   2M0  38  
2M1  H1   H1   H  0  1  N  N  N  13.290  -137.628  22.901   -7.138  -0.720   1.175  H21   PHQ  39  
2M1  H2   H2   H  0  1  N  N  N  13.129  -135.898  22.446   -6.777   0.938   1.714  H22   PHQ  40  
2M1  H47  H47  H  0  1  N  N  N  13.821  -134.406  24.004   -8.622  -1.120  -0.705  H41   PHQ  41  
2M1  H46  H46  H  0  1  N  N  N  14.134  -133.763  26.370  -10.504  -0.273  -2.047  H51   PHQ  42  
2M1  H45  H45  H  0  1  N  N  N  13.439  -135.299  28.181  -11.013   2.136  -2.072  H61   PHQ  43  
2M1  H44  H44  H  0  1  N  N  N  12.429  -137.490  27.620   -9.640   3.698  -0.755  H71   PHQ  44  
2M1  H43  H43  H  0  1  N  N  N  12.114  -138.134  25.256   -7.762   2.851   0.594  H81   PHQ  45  
2M1  H42  H42  H  0  1  N  N  N   9.858  -135.622  21.349   -3.409   0.136  -0.986  H     LEU  46  
2M1  H3   H3   H  0  1  N  N  N   9.434  -137.952  19.637   -2.204  -0.352   1.629  HA    LEU  47  
2M1  H36  H36  H  0  1  N  N  N   8.716  -135.002  19.321   -2.210  -2.457  -0.580  HB2   LEU  48  
2M1  H37  H37  H  0  1  N  N  N   8.284  -136.275  18.131   -1.171  -2.510   0.864  HB3   LEU  49  
2M1  H38  H38  H  0  1  N  N  N   7.390  -136.058  21.047   -4.218  -2.377   0.928  HG    LEU  50  
2M1  H4   H4   H  0  1  N  N  N   5.139  -135.961  19.980   -2.318  -4.720   1.393  HD11  LEU  51  
2M1  H5   H5   H  0  1  N  N  N   6.204  -134.632  19.409   -4.083  -4.753   1.624  HD12  LEU  52  
2M1  H6   H6   H  0  1  N  N  N   5.911  -136.061  18.361   -3.402  -4.525  -0.005  HD13  LEU  53  
2M1  H39  H39  H  0  1  N  N  N   6.082  -138.125  20.659   -3.894  -2.931   3.323  HD21  LEU  54  
2M1  H40  H40  H  0  1  N  N  N   6.821  -138.296  19.031   -2.129  -2.898   3.092  HD22  LEU  55  
2M1  H41  H41  H  0  1  N  N  N   7.843  -138.445  20.501   -3.080  -1.404   2.904  HD23  LEU  56  
2M1  H35  H35  H  0  1  N  N  N  10.120  -138.389  17.709    0.366  -0.930   1.062  H     LEU  57  
2M1  H7   H7   H  0  1  N  N  N  12.402  -136.825  16.513    1.195   0.378  -1.413  HA    LEU  58  
2M1  H32  H32  H  0  1  N  N  N  12.121  -139.574  17.474    1.799   1.559   1.334  HB2   LEU  59  
2M1  H33  H33  H  0  1  N  N  N  12.410  -139.569  15.701    2.596   2.058  -0.177  HB3   LEU  60  
2M1  H34  H34  H  0  1  N  N  N  14.524  -138.536  15.925   -0.416   2.142   0.301  HG    LEU  61  
2M1  H8   H8   H  0  1  N  N  N  15.405  -137.573  18.035    1.663   4.377   0.301  HD11  LEU  62  
2M1  H9   H9   H  0  1  N  N  N  13.900  -136.727  17.539   -0.098   4.598   0.436  HD12  LEU  63  
2M1  H10  H10  H  0  1  N  N  N  13.854  -137.939  18.863    0.797   3.766   1.730  HD13  LEU  64  
2M1  H11  H11  H  0  1  N  N  N  15.679  -139.991  17.598    0.267   1.866  -2.066  HD21  LEU  65  
2M1  H12  H12  H  0  1  N  N  N  14.092  -140.371  18.349   -0.407   3.488  -1.781  HD22  LEU  66  
2M1  H13  H13  H  0  1  N  N  N  14.440  -140.901  16.669    1.354   3.267  -1.916  HD23  LEU  67  
2M1  H14  H14  H  0  1  N  N  N  13.158  -136.923  11.098    5.417   1.373   0.495  H14   2M0  68  
2M1  H15  H15  H  0  1  N  N  N  13.111  -136.808  12.890    6.283   0.185   1.498  H15   2M0  69  
2M1  H16  H16  H  0  1  N  N  N  10.689  -134.318  14.282    2.846  -2.530  -1.373  H16   2M0  70  
2M1  H17  H17  H  0  1  N  N  N  10.991  -137.609  10.981    6.239   0.242  -1.553  H17   2M0  71  
2M1  H18  H18  H  0  1  N  N  N  11.198  -138.782  12.325    7.106  -0.946  -0.550  H18   2M0  72  
2M1  H19  H19  H  0  1  N  N  N  15.524  -137.997  13.622    7.607   2.218   2.761  H19   2M0  73  
2M1  H20  H20  H  0  1  N  N  N  16.181  -139.423  12.749    8.515   3.476   1.888  H20   2M0  74  
2M1  H21  H21  H  0  1  N  N  N  16.010  -137.850  11.899    6.741   3.405   1.758  H21   2M0  75  
2M1  H22  H22  H  0  1  N  N  N   9.579  -137.132  13.051    4.913  -1.590   0.495  H22   2M0  76  
2M1  H23  H23  H  0  1  N  N  N  11.638  -135.074  12.112    5.883  -2.804  -1.479  H23   2M0  77  
2M1  H24  H24  H  0  1  N  N  N   9.977  -135.340  11.480    4.926  -1.755  -2.551  H24   2M0  78  
2M1  H25  H25  H  0  1  N  N  N   9.741  -132.169  13.438    2.832  -4.793  -2.387  H25   2M0  79  
2M1  H26  H26  H  0  1  N  N  N  11.174  -132.681  12.484    3.608  -3.612  -3.470  H26   2M0  80  
2M1  H27  H27  H  0  1  N  N  N   9.522  -132.910  11.817    4.606  -4.742  -2.524  H27   2M0  81  
2M1  H28  H28  H  0  1  N  N  N   8.256  -133.857  14.486    3.923  -3.152   0.772  H28   2M0  82  
2M1  H29  H29  H  0  1  N  N  N   7.975  -134.607  12.879    3.016  -4.524   0.090  H29   2M0  83  
2M1  H30  H30  H  0  1  N  N  N   8.562  -135.611  14.248    4.790  -4.474  -0.047  H30   2M0  84  
2M1  H31  H31  H  0  1  N  N  N  11.996  -136.172  14.490    3.874   0.559  -1.186  H31   2M0  85  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
2M1  O43  S42  DOUB  N  N   1  
2M1  C41  C26  SING  N  N   2  
2M1  C41  C25  SING  N  N   3  
2M1  C26  S42  SING  N  N   4  
2M1  S42  C45  SING  N  N   5  
2M1  S42  O44  DOUB  N  N   6  
2M1  C27  C25  SING  N  N   7  
2M1  C27  C28  SING  N  N   8  
2M1  C30  C28  SING  N  N   9  
2M1  C25  N24  SING  N  N  10  
2M1  C28  C29  SING  N  N  11  
2M1  N24  C22  SING  N  N  12  
2M1  O23  C22  DOUB  N  N  13  
2M1  C22  C17  SING  N  N  14  
2M1  C17  C18  SING  N  N  15  
2M1  C17  N16  SING  N  N  16  
2M1  C18  C19  SING  N  N  17  
2M1  C19  C21  SING  N  N  18  
2M1  C19  C20  SING  N  N  19  
2M1  N16  C15  SING  N  N  20  
2M1  C15  O31  DOUB  N  N  21  
2M1  C15  C10  SING  N  N  22  
2M1  C11  C10  SING  N  N  23  
2M1  C11  C12  SING  N  N  24  
2M1  C13  C12  SING  N  N  25  
2M1  C10  N9   SING  N  N  26  
2M1  C12  C14  SING  N  N  27  
2M1  N9   C7   SING  N  N  28  
2M1  O8   C7   DOUB  N  N  29  
2M1  C7   O6   SING  N  N  30  
2M1  O6   C5   SING  N  N  31  
2M1  C5   C4   SING  N  N  32  
2M1  C4   C32  DOUB  Y  N  33  
2M1  C4   C3   SING  Y  N  34  
2M1  C32  C33  SING  Y  N  35  
2M1  C3   C2   DOUB  Y  N  36  
2M1  C33  C1   DOUB  Y  N  37  
2M1  C2   C1   SING  Y  N  38  
2M1  C5   H1   SING  N  N  39  
2M1  C5   H2   SING  N  N  40  
2M1  C10  H3   SING  N  N  41  
2M1  C13  H4   SING  N  N  42  
2M1  C13  H5   SING  N  N  43  
2M1  C13  H6   SING  N  N  44  
2M1  C17  H7   SING  N  N  45  
2M1  C20  H8   SING  N  N  46  
2M1  C20  H9   SING  N  N  47  
2M1  C20  H10  SING  N  N  48  
2M1  C21  H11  SING  N  N  49  
2M1  C21  H12  SING  N  N  50  
2M1  C21  H13  SING  N  N  51  
2M1  C26  H14  SING  N  N  52  
2M1  C26  H15  SING  N  N  53  
2M1  C28  H16  SING  N  N  54  
2M1  C41  H17  SING  N  N  55  
2M1  C41  H18  SING  N  N  56  
2M1  C45  H19  SING  N  N  57  
2M1  C45  H20  SING  N  N  58  
2M1  C45  H21  SING  N  N  59  
2M1  C25  H22  SING  N  N  60  
2M1  C27  H23  SING  N  N  61  
2M1  C27  H24  SING  N  N  62  
2M1  C30  H25  SING  N  N  63  
2M1  C30  H26  SING  N  N  64  
2M1  C30  H27  SING  N  N  65  
2M1  C29  H28  SING  N  N  66  
2M1  C29  H29  SING  N  N  67  
2M1  C29  H30  SING  N  N  68  
2M1  N24  H31  SING  N  N  69  
2M1  C18  H32  SING  N  N  70  
2M1  C18  H33  SING  N  N  71  
2M1  C19  H34  SING  N  N  72  
2M1  N16  H35  SING  N  N  73  
2M1  C11  H36  SING  N  N  74  
2M1  C11  H37  SING  N  N  75  
2M1  C12  H38  SING  N  N  76  
2M1  C14  H39  SING  N  N  77  
2M1  C14  H40  SING  N  N  78  
2M1  C14  H41  SING  N  N  79  
2M1  N9   H42  SING  N  N  80  
2M1  C3   H43  SING  N  N  81  
2M1  C2   H44  SING  N  N  82  
2M1  C1   H45  SING  N  N  83  
2M1  C33  H46  SING  N  N  84  
2M1  C32  H47  SING  N  N  85  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
2M1  SMILES            ACDLabs               12.01  "O=S(=O)(C)CCC(NC(=O)C(NC(=O)C(NC(=O)OCc1ccccc1)CC(C)C)CC(C)C)CC(C)C"  
2M1  InChI             InChI                 1.03   "InChI=1S/C28H47N3O6S/c1-19(2)15-23(13-14-38(7,35)36)29-26(32)24(16-20(3)4)30-27(33)25(17-21(5)6)31-28(34)37-18-22-11-9-8-10-12-22/h8-12,19-21,23-25H,13-18H2,1-7H3,(H,29,32)(H,30,33)(H,31,34)/t23-,24+,25+/m1/s1"  
2M1  InChIKey          InChI                 1.03   UXVISWMDYFNKOC-DSITVLBTSA-N  
2M1  SMILES_CANONICAL  CACTVS                3.385  "CC(C)C[C@@H](CC[S](C)(=O)=O)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)OCc1ccccc1"  
2M1  SMILES            CACTVS                3.385  "CC(C)C[CH](CC[S](C)(=O)=O)NC(=O)[CH](CC(C)C)NC(=O)[CH](CC(C)C)NC(=O)OCc1ccccc1"  
2M1  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "CC(C)C[C@@H](CCS(=O)(=O)C)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)OCc1ccccc1"  
2M1  SMILES            "OpenEye OEToolkits"  1.7.6  "CC(C)CC(CCS(=O)(=O)C)NC(=O)C(CC(C)C)NC(=O)C(CC(C)C)NC(=O)OCc1ccccc1"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
2M1  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-[(benzyloxy)carbonyl]-L-leucyl-N-[(3S)-5-methyl-1-(methylsulfonyl)hexan-3-yl]-L-leucinamide"  
2M1  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(phenylmethyl) N-[(2S)-4-methyl-1-[[(2S)-4-methyl-1-[[(3S)-5-methyl-1-methylsulfonyl-hexan-3-yl]amino]-1-oxidanylidene-pentan-2-yl]amino]-1-oxidanylidene-pentan-2-yl]carbamate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
2M1  "Create component"  2013-12-02  RCSB  
2M1  "Initial release"   2014-02-12  RCSB  
2M1  "Modify synonyms"   2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     2M1
_pdbx_chem_comp_synonyms.name        PHQ-Leu-Leu-Leu-vinylsulfone
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
