data_48Z
#

_chem_comp.id                                   48Z
_chem_comp.name                                 2-deoxy-2-fluoro-5-O-thiophosphono-alpha-D-arabinofuranose
_chem_comp.type                                 "D-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C5 H10 F O6 P S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2011-05-11
_chem_comp.pdbx_modified_date                   2021-03-03
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       248.166
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    48Z
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3ROM
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
48Z  O1    O1    O  0  1  N  Y  N  2.662  -3.232   2.791   3.293  -1.968   1.015  O1    48Z   1  
48Z  P     P     P  0  1  N  N  N  5.525  -3.829  -2.878  -2.805   0.056   0.353  P     48Z   2  
48Z  C1    C1    C  0  1  N  N  S  3.132  -2.367   1.754   2.898  -1.256  -0.159  C1    48Z   3  
48Z  C2    C2    C  0  1  N  N  S  2.706  -1.086   1.050   3.500   0.162  -0.139  C2    48Z   4  
48Z  F2    F2    F  0  1  N  N  N  3.816  -0.405   0.576   4.258   0.389  -1.293  F2    48Z   5  
48Z  C3    C3    C  0  1  N  N  R  1.902  -1.643  -0.119   2.266   1.097  -0.105  C3    48Z   6  
48Z  O3    O3    O  0  1  N  N  N  0.530  -1.881   0.269   2.480   2.192   0.788  O3    48Z   7  
48Z  C4    C4    C  0  1  N  N  R  2.596  -2.972  -0.404   1.159   0.154   0.430  C4    48Z   8  
48Z  O4    O4    O  0  1  N  N  N  3.574  -3.179   0.648   1.468  -1.117  -0.189  O4    48Z   9  
48Z  C5    C5    C  0  1  N  N  N  3.306  -2.856  -1.783  -0.223   0.643  -0.007  C5    48Z  10  
48Z  O5    O5    O  0  1  N  N  N  4.729  -2.991  -1.706  -1.230  -0.173   0.594  O5    48Z  11  
48Z  OP1   OP1   O  0  1  N  N  N  4.842  -3.451  -4.331  -3.159   1.451   0.699  OP1   48Z  12  
48Z  OP2   OP2   O  0  1  N  Y  N  5.356  -5.411  -2.632  -3.643  -0.956   1.283  OP2   48Z  13  
48Z  SP3   SP3   S  0  1  N  N  N  7.365  -3.333  -2.866  -3.268  -0.306  -1.684  SP3   48Z  14  
48Z  H2    H2    H  0  1  N  N  N  2.071  -0.471   1.705   4.111   0.305   0.752  H2    48Z  15  
48Z  H3    H3    H  0  1  N  N  N  1.971  -0.975  -0.990   2.023   1.455  -1.106  H3    48Z  16  
48Z  HO3   HO3   H  0  1  N  Y  N  0.046  -2.227  -0.472   3.223   2.760   0.543  HO3   48Z  17  
48Z  H4    H4    H  0  1  N  N  N  1.859  -3.788  -0.431   1.214   0.076   1.516  H4    48Z  18  
48Z  H52   H5    H  0  1  N  N  N  2.917  -3.646  -2.443  -0.359   1.678   0.308  H5    48Z  19  
48Z  H51   H5A   H  0  1  N  N  N  3.073  -1.871  -2.213  -0.305   0.580  -1.092  H5A   48Z  20  
48Z  HOP2  HOP2  H  0  0  N  Y  N  4.900  -5.800  -3.369  -3.462  -1.890   1.111  HOP2  48Z  21  
48Z  HSP3  HSP3  H  0  0  N  N  N  7.517  -2.830  -4.055  -4.593  -0.081  -1.737  HSP3  48Z  22  
48Z  HO1   HO1   H  0  1  N  Y  N  3.274  -3.949   2.908   2.943  -2.868   1.066  HO1   48Z  23  
48Z  H1    H10   H  0  1  N  N  N  4.098  -2.047   2.173   3.237  -1.790  -1.047  H10   48Z  24  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
48Z  P    SP3   SING  N  N   1  
48Z  P    OP2   SING  N  N   2  
48Z  P    O5    SING  N  N   3  
48Z  C1   O1    SING  N  N   4  
48Z  C2   C1    SING  N  N   5  
48Z  C2   H2    SING  N  N   6  
48Z  F2   C2    SING  N  N   7  
48Z  C3   C2    SING  N  N   8  
48Z  C3   O3    SING  N  N   9  
48Z  C3   H3    SING  N  N  10  
48Z  O3   HO3   SING  N  N  11  
48Z  C4   C3    SING  N  N  12  
48Z  C4   O4    SING  N  N  13  
48Z  C4   H4    SING  N  N  14  
48Z  O4   C1    SING  N  N  15  
48Z  C5   C4    SING  N  N  16  
48Z  C5   O5    SING  N  N  17  
48Z  C5   H52   SING  N  N  18  
48Z  C5   H51   SING  N  N  19  
48Z  OP1  P     DOUB  N  N  20  
48Z  OP2  HOP2  SING  N  N  21  
48Z  SP3  HSP3  SING  N  N  22  
48Z  O1   HO1   SING  N  N  23  
48Z  C1   H1    SING  N  N  24  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
48Z  SMILES            ACDLabs               12.01  "FC1C(O)C(OC1O)COP(=O)(O)S"  
48Z  InChI             InChI                 1.03   "InChI=1S/C5H10FO6PS/c6-3-4(7)2(12-5(3)8)1-11-13(9,10)14/h2-5,7-8H,1H2,(H2,9,10,14)/t2-,3+,4-,5+/m1/s1"  
48Z  InChIKey          InChI                 1.03   ACXIGHNBDAUOFX-LECHCGJUSA-N  
48Z  SMILES_CANONICAL  CACTVS                3.370  "O[C@H]1O[C@H](CO[P](O)(S)=O)[C@@H](O)[C@@H]1F"  
48Z  SMILES            CACTVS                3.370  "O[CH]1O[CH](CO[P](O)(S)=O)[CH](O)[CH]1F"  
48Z  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "C([C@@H]1[C@H]([C@@H]([C@H](O1)O)F)O)O[P@](=O)(O)S"  
48Z  SMILES            "OpenEye OEToolkits"  1.7.6  "C(C1C(C(C(O1)O)F)O)OP(=O)(O)S"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
48Z  "SYSTEMATIC NAME"  ACDLabs               12.01  2-deoxy-2-fluoro-5-O-thiophosphono-alpha-D-arabinofuranose  
48Z  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "[(2R,3R,4S,5S)-4-fluoranyl-3,5-bis(oxidanyl)oxolan-2-yl]methoxy-sulfanyl-phosphinic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
48Z  "Create component"          2011-05-11  PDBJ  
48Z  "Modify descriptor"         2011-06-04  RCSB  
48Z  "Other modification"        2013-01-08  RCSB  
48Z  "Modify synonyms"           2021-03-03  RCSB  
48Z  "Modify leaving atom flag"  2021-03-03  RCSB  
48Z  "Modify linking type"       2021-03-03  RCSB  
##
