data_75C
# 
_chem_comp.id                                    75C 
_chem_comp.name                                  "5'-({[(2R,3S)-3-amino-4-hydroxy-2-{[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl]sulfanyl}butyl]sulfonyl}amino)-5'-deoxyadenosine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H44 N9 O13 P S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-08-26 
_chem_comp.pdbx_modified_date                    2016-09-09 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        773.773 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     75C 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5JA2 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
75C O1  O3  O 0 1 N N N -46.871 -23.026 -25.851 -14.948 -1.321 1.211  O1  75C 1  
75C C1  C4  C 0 1 Y N N -58.195 -22.532 -14.821 11.383  0.570  -1.026 C1  75C 2  
75C C2  C6  C 0 1 Y N N -59.713 -20.709 -15.082 12.746  2.556  -1.126 C2  75C 3  
75C C3  C8  C 0 1 Y N N -59.069 -24.049 -16.101 9.447   1.429  -0.415 C3  75C 4  
75C O2  O1  O 0 1 N N N -57.034 -27.799 -13.146 8.991   -4.098 0.186  O2  75C 5  
75C C4  C   C 0 1 N N R -59.221 -27.935 -20.147 2.010   -0.254 1.715  C4  75C 6  
75C N1  N   N 0 1 N N N -56.998 -27.876 -17.702 5.176   -1.536 -0.545 N1  75C 7  
75C S1  S   S 0 1 N N N -57.452 -29.185 -18.512 3.577   -1.552 -0.114 S1  75C 8  
75C C5  C1  C 0 1 N N N -59.021 -28.978 -19.039 3.458   -0.333 1.225  C5  75C 9  
75C N2  N1  N 0 1 Y N N -58.952 -19.990 -14.231 13.758  1.774  -1.488 N2  75C 10 
75C C6  C2  C 0 1 Y N N -57.848 -20.523 -13.690 13.603  0.469  -1.615 C6  75C 11 
75C N3  N2  N 0 1 N N N -61.497 -28.176 -19.275 2.817   0.394  3.934  N3  75C 12 
75C O3  O2  O 0 1 N N N -56.222 -25.428 -12.731 10.986  -2.476 0.582  O3  75C 13 
75C C7  C3  C 0 1 N N N -57.700 -27.860 -16.408 6.196   -1.982 0.408  C7  75C 14 
75C N4  N3  N 0 1 Y N N -57.463 -21.773 -13.975 12.452  -0.130 -1.393 N4  75C 15 
75C C8  C5  C 0 1 Y N N -59.339 -22.008 -15.393 11.497  1.962  -0.878 C8  75C 16 
75C N5  N6  N 0 1 N N N -60.829 -20.168 -15.627 12.919  3.923  -0.995 N5  75C 17 
75C N6  N7  N 0 1 Y N N -59.867 -22.962 -16.185 10.280  2.425  -0.503 N6  75C 18 
75C N7  N9  N 0 1 Y N N -58.052 -23.779 -15.272 10.078  0.263  -0.733 N7  75C 19 
75C C9  CA  C 0 1 N N S -60.619 -27.290 -20.076 1.910   0.774  2.843  C9  75C 20 
75C C10 CB  C 0 1 N N N -60.696 -25.861 -19.562 2.301   2.155  2.312  C10 75C 21 
75C S2  S1P S 0 1 N N N -57.942 -26.718 -20.133 0.934   0.247  0.343  S2  75C 22 
75C P1  P2A P 0 1 N N N -46.856 -22.954 -27.682 -14.923 -0.999 -0.234 P1  75C 23 
75C C11 C2P C 0 1 N N N -57.724 -25.997 -21.728 -0.729  0.089  1.050  C11 75C 24 
75C O4  O2P O 0 1 N N N -56.530 -29.428 -19.587 2.898   -1.088 -1.272 O4  75C 25 
75C C12 C3P C 0 1 N N N -57.283 -27.018 -22.771 -1.762  0.593  0.041  C12 75C 26 
75C O5  O3P O 0 1 N N N -57.400 -30.301 -17.615 3.362   -2.864 0.387  O5  75C 27 
75C O6  O4A O 0 1 N N N -46.424 -24.456 -28.643 -15.860 0.279  -0.516 O6  75C 28 
75C N8  N4P N 0 1 N N N -56.061 -26.466 -23.346 -3.105  0.465  0.612  N8  75C 29 
75C C13 C5P C 0 1 N N N -55.920 -25.744 -24.374 -4.181  0.851  -0.103 C13 75C 30 
75C O7  O5P O 0 1 N N N -56.851 -25.392 -25.078 -4.037  1.304  -1.219 O7  75C 31 
75C O8  O6A O 0 1 N N N -48.416 -22.415 -28.214 -13.413 -0.668 -0.684 O8  75C 32 
75C C14 C6P C 0 1 N N N -54.507 -25.323 -24.713 -5.562  0.719  0.485  C14 75C 33 
75C C15 C7P C 0 1 N N N -54.492 -24.550 -26.026 -6.596  1.224  -0.524 C15 75C 34 
75C N9  N8P N 0 1 N N N -53.092 -24.230 -26.270 -7.939  1.096  0.047  N9  75C 35 
75C C16 C9P C 0 1 N N N -52.548 -23.987 -27.385 -9.014  1.482  -0.668 C16 75C 36 
75C O9  O9P O 0 1 N N N -53.161 -24.011 -28.443 -8.880  1.846  -1.817 O9  75C 37 
75C C17 CAP C 0 1 N N R -51.076 -23.685 -27.350 -10.384 1.459  -0.040 C17 75C 38 
75C O10 OAP O 0 1 N N N -50.598 -23.913 -26.020 -10.264 1.161  1.353  O10 75C 39 
75C C18 CBP C 0 1 N N N -50.771 -22.241 -27.738 -11.240 0.388  -0.719 C18 75C 40 
75C C19 CCP C 0 1 N N N -49.361 -21.894 -27.279 -12.614 0.333  -0.049 C19 75C 41 
75C C20 CDP C 0 1 N N N -50.860 -22.057 -29.246 -11.408 0.734  -2.200 C20 75C 42 
75C C21 CEP C 0 1 N N N -51.763 -21.297 -27.070 -10.553 -0.972 -0.587 C21 75C 43 
75C O11 OG  O 0 1 N N N -62.010 -25.407 -19.908 2.078   3.136  3.327  O11 75C 44 
75C C22 C1* C 0 1 N N R -56.953 -24.704 -14.905 9.476   -1.072 -0.750 C22 75C 45 
75C C23 C2* C 0 1 N N R -57.325 -25.456 -13.639 9.727   -1.801 0.595  C23 75C 46 
75C C24 C3* C 0 1 N N S -57.598 -26.877 -14.081 8.557   -2.814 0.637  C24 75C 47 
75C C25 C4* C 0 1 N N R -56.913 -26.997 -15.430 7.513   -2.226 -0.332 C25 75C 48 
75C O12 O4* O 0 1 N N N -56.768 -25.671 -15.942 8.037   -0.980 -0.821 O12 75C 49 
75C H2  H2  H 0 1 N N N -59.226 -24.984 -16.618 8.408   1.513  -0.132 H2  75C 50 
75C H3  H3  H 0 1 N N N -57.474 -27.710 -12.309 9.691   -4.490 0.727  H3  75C 51 
75C H4  H4  H 0 1 N N N -59.132 -28.447 -21.117 1.698   -1.231 2.084  H4  75C 52 
75C H5  H5  H 0 1 N N N -56.010 -27.900 -17.549 5.437   -1.232 -1.428 H5  75C 53 
75C H6  H6  H 0 1 N N N -59.630 -28.674 -18.175 3.770   0.644  0.856  H6  75C 54 
75C H7  H7  H 0 1 N N N -59.380 -29.946 -19.418 4.104   -0.634 2.049  H7  75C 55 
75C H8  H8  H 0 1 N N N -57.255 -19.931 -13.009 14.451  -0.129 -1.911 H8  75C 56 
75C H9  H9  H 0 1 N N N -62.411 -27.775 -19.216 2.540   -0.485 4.345  H9  75C 57 
75C H10 H10 H 0 1 N N N -61.554 -29.073 -19.713 3.773   0.358  3.614  H10 75C 58 
75C H12 H12 H 0 1 N N N -56.452 -25.898 -11.938 11.188  -2.947 1.403  H12 75C 59 
75C H13 H13 H 0 1 N N N -58.709 -27.442 -16.540 6.343   -1.214 1.168  H13 75C 60 
75C H14 H14 H 0 1 N N N -57.777 -28.885 -16.017 5.870   -2.907 0.884  H14 75C 61 
75C H15 H15 H 0 1 N N N -60.943 -19.232 -15.294 13.786  4.321  -1.169 H15 75C 62 
75C H16 H16 H 0 1 N N N -60.743 -20.160 -16.623 12.173  4.483  -0.730 H16 75C 63 
75C H17 H17 H 0 1 N N N -61.013 -27.281 -21.103 0.886   0.805  3.216  H17 75C 64 
75C H18 H18 H 0 1 N N N -60.554 -25.835 -18.472 3.355   2.152  2.035  H18 75C 65 
75C H19 H19 H 0 1 N N N -59.932 -25.235 -20.046 1.695   2.393  1.438  H19 75C 66 
75C H20 H20 H 0 1 N N N -56.959 -25.210 -21.658 -0.927  -0.958 1.281  H20 75C 67 
75C H21 H21 H 0 1 N N N -58.678 -25.554 -22.049 -0.793  0.681  1.963  H21 75C 68 
75C H22 H22 H 0 1 N N N -58.055 -27.138 -23.545 -1.564  1.640  -0.190 H22 75C 69 
75C H23 H23 H 0 1 N N N -57.083 -27.991 -22.299 -1.698  0.001  -0.872 H23 75C 70 
75C H24 H24 H 0 1 N N N -45.571 -24.773 -28.370 -15.891 0.547  -1.445 H24 75C 71 
75C H25 H25 H 0 1 N N N -55.217 -26.690 -22.859 -3.220  0.103  1.504  H25 75C 72 
75C H26 H26 H 0 1 N N N -53.874 -26.218 -24.810 -5.761  -0.327 0.716  H26 75C 73 
75C H27 H27 H 0 1 N N N -54.115 -24.682 -23.909 -5.627  1.311  1.398  H27 75C 74 
75C H28 H28 H 0 1 N N N -55.088 -23.629 -25.938 -6.397  2.271  -0.755 H28 75C 75 
75C H29 H29 H 0 1 N N N -54.893 -25.169 -26.842 -6.531  0.632  -1.437 H29 75C 76 
75C H30 H30 H 0 1 N N N -52.496 -24.199 -25.468 -8.054  0.734  0.939  H30 75C 77 
75C H31 H31 H 0 1 N N N -50.558 -24.354 -28.053 -10.856 2.434  -0.163 H31 75C 78 
75C H32 H32 H 0 1 N N N -50.782 -24.810 -25.766 -9.852  0.306  1.538  H32 75C 79 
75C H33 H33 H 0 1 N N N -49.179 -22.336 -26.288 -13.104 1.302  -0.143 H33 75C 80 
75C H34 H34 H 0 1 N N N -49.253 -20.801 -27.219 -12.494 0.087  1.006  H34 75C 81 
75C H35 H35 H 0 1 N N N -50.637 -21.011 -29.502 -10.449 0.633  -2.708 H35 75C 82 
75C H36 H36 H 0 1 N N N -50.133 -22.718 -29.740 -12.131 0.054  -2.652 H36 75C 83 
75C H37 H37 H 0 1 N N N -51.875 -22.309 -29.587 -11.764 1.759  -2.296 H37 75C 84 
75C H38 H38 H 0 1 N N N -51.709 -21.420 -25.978 -10.433 -1.218 0.468  H38 75C 85 
75C H39 H39 H 0 1 N N N -51.516 -20.258 -27.335 -11.162 -1.735 -1.071 H39 75C 86 
75C H40 H40 H 0 1 N N N -52.781 -21.531 -27.415 -9.573  -0.933 -1.065 H40 75C 87 
75C H41 H41 H 0 1 N N N -62.124 -24.512 -19.612 2.306   4.037  3.060  H41 75C 88 
75C H42 H42 H 0 1 N N N -56.027 -24.136 -14.734 9.868   -1.658 -1.582 H42 75C 89 
75C H43 H43 H 0 1 N N N -58.228 -25.017 -13.189 9.669   -1.104 1.431  H43 75C 90 
75C H44 H44 H 0 1 N N N -58.681 -27.035 -14.194 8.148   -2.883 1.646  H44 75C 91 
75C H45 H45 H 0 1 N N N -55.922 -27.451 -15.282 7.350   -2.913 -1.162 H45 75C 92 
75C O13 O4  O 0 1 N Y N -45.843 -21.782 -28.137 -15.468 -2.260 -1.074 O13 75C 93 
75C H1  H1  H 0 1 N Y N -45.465 -21.373 -27.367 -16.375 -2.517 -0.854 H1  75C 94 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
75C C20 C18 SING N N 1  
75C O6  P1  SING N N 2  
75C O9  C16 DOUB N N 3  
75C O8  P1  SING N N 4  
75C O8  C19 SING N N 5  
75C C18 C17 SING N N 6  
75C C18 C19 SING N N 7  
75C C18 C21 SING N N 8  
75C P1  O1  DOUB N N 9  
75C C16 C17 SING N N 10 
75C C16 N9  SING N N 11 
75C C17 O10 SING N N 12 
75C N9  C15 SING N N 13 
75C C15 C14 SING N N 14 
75C O7  C13 DOUB N N 15 
75C C14 C13 SING N N 16 
75C C13 N8  SING N N 17 
75C N8  C12 SING N N 18 
75C C12 C11 SING N N 19 
75C C11 S2  SING N N 20 
75C C4  S2  SING N N 21 
75C C4  C9  SING N N 22 
75C C4  C5  SING N N 23 
75C C9  C10 SING N N 24 
75C C9  N3  SING N N 25 
75C O11 C10 SING N N 26 
75C O4  S1  DOUB N N 27 
75C C5  S1  SING N N 28 
75C S1  N1  SING N N 29 
75C S1  O5  DOUB N N 30 
75C N1  C7  SING N N 31 
75C C7  C25 SING N N 32 
75C N6  C3  DOUB Y N 33 
75C N6  C8  SING Y N 34 
75C C3  N7  SING Y N 35 
75C O12 C25 SING N N 36 
75C O12 C22 SING N N 37 
75C N5  C2  SING N N 38 
75C C25 C24 SING N N 39 
75C C8  C2  DOUB Y N 40 
75C C8  C1  SING Y N 41 
75C N7  C22 SING N N 42 
75C N7  C1  SING Y N 43 
75C C2  N2  SING Y N 44 
75C C22 C23 SING N N 45 
75C C1  N4  DOUB Y N 46 
75C N2  C6  DOUB Y N 47 
75C C24 C23 SING N N 48 
75C C24 O2  SING N N 49 
75C N4  C6  SING Y N 50 
75C C23 O3  SING N N 51 
75C C3  H2  SING N N 52 
75C O2  H3  SING N N 53 
75C C4  H4  SING N N 54 
75C N1  H5  SING N N 55 
75C C5  H6  SING N N 56 
75C C5  H7  SING N N 57 
75C C6  H8  SING N N 58 
75C N3  H9  SING N N 59 
75C N3  H10 SING N N 60 
75C O3  H12 SING N N 61 
75C C7  H13 SING N N 62 
75C C7  H14 SING N N 63 
75C N5  H15 SING N N 64 
75C N5  H16 SING N N 65 
75C C9  H17 SING N N 66 
75C C10 H18 SING N N 67 
75C C10 H19 SING N N 68 
75C C11 H20 SING N N 69 
75C C11 H21 SING N N 70 
75C C12 H22 SING N N 71 
75C C12 H23 SING N N 72 
75C O6  H24 SING N N 73 
75C N8  H25 SING N N 74 
75C C14 H26 SING N N 75 
75C C14 H27 SING N N 76 
75C C15 H28 SING N N 77 
75C C15 H29 SING N N 78 
75C N9  H30 SING N N 79 
75C C17 H31 SING N N 80 
75C O10 H32 SING N N 81 
75C C19 H33 SING N N 82 
75C C19 H34 SING N N 83 
75C C20 H35 SING N N 84 
75C C20 H36 SING N N 85 
75C C20 H37 SING N N 86 
75C C21 H38 SING N N 87 
75C C21 H39 SING N N 88 
75C C21 H40 SING N N 89 
75C O11 H41 SING N N 90 
75C C22 H42 SING N N 91 
75C C23 H43 SING N N 92 
75C C24 H44 SING N N 93 
75C C25 H45 SING N N 94 
75C P1  O13 SING N N 95 
75C O13 H1  SING N N 96 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
75C SMILES           ACDLabs              12.01 "O=P(O)(O)OCC(C(C(NCCC(NCCSC(C(N)CO)CS(NCC3C(O)C(O)C(n2c1ncnc(c1nc2)N)O3)(=O)=O)=O)=O)O)(C)C" 
75C InChI            InChI                1.03  
;InChI=1S/C25H44N9O13PS2/c1-25(2,10-46-48(41,42)43)20(39)23(40)29-4-3-16(36)28-5-6-49-15(13(26)8-35)9-50(44,45)33-7-14-18(37)19(38)24(47-14)34-12-32-17-21(27)30-11-31-22(17)34/h11-15,18-20,24,33,35,37-39H,3-10,26H2,1-2H3,(H,28,36)(H,29,40)(H2,27,30,31)(H2,41,42,43)/t13-,14+,15-,18+,19+,20-,24+/m0/s1
;
75C InChIKey         InChI                1.03  ISNNGRBZFMWGAL-DROAMXOMSA-N 
75C SMILES_CANONICAL CACTVS               3.385 "CC(C)(CO[P](O)(O)=O)[C@@H](O)C(=O)NCCC(=O)NCCS[C@@H](C[S](=O)(=O)NC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23)[C@@H](N)CO" 
75C SMILES           CACTVS               3.385 "CC(C)(CO[P](O)(O)=O)[CH](O)C(=O)NCCC(=O)NCCS[CH](C[S](=O)(=O)NC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23)[CH](N)CO" 
75C SMILES_CANONICAL "OpenEye OEToolkits" 2.0.5 "CC(C)(COP(=O)(O)O)[C@H](C(=O)NCCC(=O)NCCS[C@@H](CS(=O)(=O)NC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O)[C@H](CO)N)O" 
75C SMILES           "OpenEye OEToolkits" 2.0.5 "CC(C)(COP(=O)(O)O)C(C(=O)NCCC(=O)NCCSC(CS(=O)(=O)NCC1C(C(C(O1)n2cnc3c2ncnc3N)O)O)C(CO)N)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
75C "SYSTEMATIC NAME" ACDLabs              12.01 "5'-({[(2R,3S)-3-amino-4-hydroxy-2-{[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl]sulfanyl}butyl]sulfonyl}amino)-5'-deoxyadenosine" 
75C "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.5 
;[(3~{R})-4-[[3-[2-[(2~{R},3~{S})-1-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfamoyl]-3-azanyl-4-oxidanyl-butan-2-yl]sulfanylethylamino]-3-oxidanylidene-propyl]amino]-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-butyl] dihydrogen phosphate
;
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
75C "Create component" 2016-08-26 RCSB 
75C "Initial release"  2016-09-14 RCSB 
# 
