data_8I4
# 
_chem_comp.id                                    8I4 
_chem_comp.name                                  "(2R,3S,5R,6R)-2,3,4,5,6-pentakis(oxidanyl)cyclohexane-1-carboxylic acid" 
_chem_comp.type                                  saccharide 
_chem_comp.pdbx_type                             ATOMS 
_chem_comp.formula                               "C7 H12 O7" 
_chem_comp.mon_nstd_parent_comp_id               GTR 
_chem_comp.pdbx_synonyms                         "(2R)-5-[(E)-2-(2,4-dinitrophenyl)ethenyl]-2-[(1R)-2-oxidanyl-2-oxidanylidene-1-(2-thiophen-2-ylethanoylamino)ethyl]-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-09-16 
_chem_comp.pdbx_modified_date                    2022-08-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        208.166 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8I4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7PR6 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8I4 C3   C1  C 0 1 N N S -12.254 -2.147 49.737 1.241  -1.056 -0.079 C3   8I4 1  
8I4 C5   C2  C 0 1 N N N -13.858 -2.072 51.713 -0.914 0.151  -0.460 C5   8I4 2  
8I4 C6   C3  C 0 1 N N N -14.815 -2.838 52.589 -2.389 0.160  -0.153 C6   8I4 3  
8I4 O3   O3  O 0 1 N N N -11.620 -2.910 48.706 1.854  -2.174 0.566  O3   8I4 4  
8I4 O4   O4  O 0 1 N N N -14.361 -3.506 49.773 -0.851 -2.256 -0.245 O4   8I4 5  
8I4 C1   C4  C 0 1 N N S -11.836 -0.570 51.687 1.219  1.436  -0.260 C1   8I4 6  
8I4 C2   C5  C 0 1 N N N -11.200 -1.413 50.614 1.876  0.239  0.431  C2   8I4 7  
8I4 C4   C6  C 0 1 N N R -13.279 -2.964 50.579 -0.257 -1.046 0.232  C4   8I4 8  
8I4 C7   C7  C 0 1 N N R -12.794 -1.328 52.547 -0.279 1.446  0.051  C7   8I4 9  
8I4 O2   O2  O 0 1 N N N -10.517 -0.490 49.780 3.275  0.230  0.140  O2   8I4 10 
8I4 O6B  O8  O 0 1 N N N -14.312 -3.384 53.565 -3.156 -0.882 -0.512 O6B  8I4 11 
8I4 O6A  O6  O 0 1 N N N -16.063 -2.885 52.309 -2.882 1.106  0.415  O6A  8I4 12 
8I4 H3   H1  H 0 1 N N N -12.837 -1.355 49.244 1.388  -1.133 -1.157 H3   8I4 13 
8I4 H5   H2  H 0 1 N N N -14.451 -1.293 51.211 -0.767 0.074  -1.537 H5   8I4 14 
8I4 HO3  H3  H 0 1 N Y N -11.010 -2.357 48.232 2.806  -2.243 0.412  HO3  8I4 15 
8I4 HO4  H4  H 0 1 N Y N -14.957 -3.994 50.329 -0.482 -3.057 0.151  HO4  8I4 16 
8I4 H1   H5  H 0 1 N N N -11.051 -0.122 52.314 1.672  2.359  0.103  H1   8I4 17 
8I4 H2   H7  H 0 1 N N N -10.512 -2.146 51.059 1.729  0.316  1.508  H2   8I4 18 
8I4 H4   H8  H 0 1 N N N -12.735 -3.795 51.052 -0.404 -0.969 1.309  H4   8I4 19 
8I4 H7   H9  H 0 1 N N N -12.142 -2.203 52.687 -0.746 2.298  -0.442 H7   8I4 20 
8I4 HO2  H10 H 0 1 N Y N -9.864  -0.025 50.290 3.743  1.023  0.436  HO2  8I4 21 
8I4 HO6B H11 H 0 0 N N N -14.987 -3.833 54.060 -4.097 -0.830 -0.294 HO6B 8I4 22 
8I4 O1   O1  O 0 1 N Y N -12.604 0.428  51.056 1.412  1.335  -1.673 O1   8I4 23 
8I4 HO1  H6  H 0 1 N Y N -13.017 0.974  51.715 2.340  1.323  -1.943 HO1  8I4 24 
8I4 O7   O7  O 0 1 N N N ?       ?      ?      -0.471 1.547  1.463  O7   8I4 25 
8I4 HO7  H12 H 0 1 N N N ?       ?      ?      -0.093 2.346  1.855  HO7  8I4 26 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8I4 O3  C3   SING N N 1  
8I4 C3  C4   SING N N 2  
8I4 C3  C2   SING N N 3  
8I4 O4  C4   SING N N 4  
8I4 O2  C2   SING N N 5  
8I4 C4  C5   SING N N 6  
8I4 C2  C1   SING N N 7  
8I4 C1  C7   SING N N 8  
8I4 C5  C7   SING N N 9  
8I4 C5  C6   SING N N 10 
8I4 O6A C6   DOUB N N 11 
8I4 C6  O6B  SING N N 12 
8I4 C3  H3   SING N N 13 
8I4 C5  H5   SING N N 14 
8I4 O3  HO3  SING N N 15 
8I4 O4  HO4  SING N N 16 
8I4 C1  H1   SING N N 17 
8I4 C2  H2   SING N N 18 
8I4 C4  H4   SING N N 19 
8I4 C7  H7   SING N N 20 
8I4 O2  HO2  SING N N 21 
8I4 O6B HO6B SING N N 22 
8I4 C1  O1   SING N N 23 
8I4 O1  HO1  SING N N 24 
8I4 C7  O7   SING N N 25 
8I4 O7  HO7  SING N N 26 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8I4 InChI            InChI                1.06  "InChI=1S/C7H12O7/c8-2-1(7(13)14)3(9)5(11)6(12)4(2)10/h1-6,8-12H,(H,13,14)/t1-,2-,3?,4+,5+,6-/m1/s1" 
8I4 InChIKey         InChI                1.06  FMRFYBAGJDOHAJ-ZREPEFIBSA-N                                                                          
8I4 SMILES_CANONICAL CACTVS               3.385 "O[C@@H]1[C@@H](O)[C@H](O)[C@H]([C@@H](O)[C@@H]1O)C(O)=O"                                            
8I4 SMILES           CACTVS               3.385 "O[CH]1[CH](O)[CH](O)[CH]([CH](O)[CH]1O)C(O)=O"                                                      
8I4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[C@H]1([C@@H](C([C@H]([C@@H](C1C(=O)O)O)O)O)O)O"                                                    
8I4 SMILES           "OpenEye OEToolkits" 2.0.7 "C1(C(C(C(C(C1O)O)O)O)O)C(=O)O"                                                                      
# 
_pdbx_chem_comp_identifier.comp_id           8I4 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{R},3~{S},5~{S},6~{S})-2,3,4,5,6-pentakis(oxidanyl)cyclohexane-1-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8I4 "Create component"         2021-09-16 PDBE 
8I4 "Modify leaving atom flag" 2021-09-26 PDBE 
8I4 "Modify linking type"      2021-09-26 PDBE 
8I4 "Modify leaving atom flag" 2021-09-29 PDBE 
8I4 "Modify linking type"      2021-10-03 PDBE 
8I4 "Initial release"          2022-08-03 RCSB 
8I4 "Modify descriptor"        2022-08-22 RCSB 
# 
