data_8YD
#

_chem_comp.id                                   8YD
_chem_comp.name                                 "1-{4-[6-chloro-8-fluoro-7-(5-methyl-1H-indazol-4-yl)quinazolin-4-yl]piperazin-1-yl}propan-1-one"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C23 H22 Cl F N6 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "KRAS(G12C) inhibitor, acrylamide form, bound form"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-03-20
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       452.912
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    8YD
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5V6S
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
8YD  C10   C1   C   0  1  Y  N  N   -5.300  19.238  -22.550  -6.404  -0.826  -0.731  C10   8YD   1  
8YD  C13   C2   C   0  1  N  N  N   -7.762  16.356  -22.071  -3.476   0.153  -2.907  C13   8YD   2  
8YD  C20   C3   C   0  1  Y  N  N  -13.811  18.463  -21.939   1.762   1.235   0.138  C20   8YD   3  
8YD  C22   C4   C   0  1  N  N  N  -14.213  18.491  -19.388   3.489   0.243   1.382  C22   8YD   4  
8YD  C26   C5   C   0  1  N  N  N  -18.549  19.129  -17.381   7.508  -0.788  -0.968  C26   8YD   5  
8YD  CL    CL1  CL  0  0  N  N  N   -9.370  19.801  -19.515  -1.776  -2.436  -0.547  CL    8YD   6  
8YD  C02   C6   C   0  1  Y  N  N  -10.279  19.165  -20.887  -1.304  -0.781  -0.322  C02   8YD   7  
8YD  C03   C7   C   0  1  Y  N  N   -9.599  18.774  -22.035  -2.286   0.222  -0.282  C03   8YD   8  
8YD  C04   C8   C   0  1  Y  N  N   -8.061  18.876  -22.190  -3.714  -0.142  -0.431  C04   8YD   9  
8YD  C05   C9   C   0  1  Y  N  N   -7.525  20.191  -22.338  -4.490  -0.454   0.705  C05   8YD  10  
8YD  C06   C10  C   0  1  Y  N  N   -8.111  21.499  -22.358  -4.212  -0.511   2.089  C06   8YD  11  
8YD  N07   N1   N   0  1  Y  N  N   -7.136  22.379  -22.533  -5.297  -0.857   2.719  N07   8YD  12  
8YD  N08   N2   N   0  1  Y  N  N   -5.975  21.711  -22.617  -6.337  -1.046   1.800  N08   8YD  13  
8YD  C09   C11  C   0  1  Y  N  N   -6.159  20.371  -22.511  -5.845  -0.798   0.544  C09   8YD  14  
8YD  C11   C12  C   0  1  Y  N  N   -5.834  17.955  -22.397  -5.635  -0.519  -1.831  C11   8YD  15  
8YD  C12   C13  C   0  1  Y  N  N   -7.210  17.765  -22.233  -4.298  -0.179  -1.689  C12   8YD  16  
8YD  C14   C14  C   0  1  Y  N  N  -10.341  18.298  -23.103  -1.930   1.551  -0.104  C14   8YD  17  
8YD  F15   F1   F   0  1  N  N  N   -9.735  17.881  -24.243  -2.878   2.513  -0.065  F15   8YD  18  
8YD  C16   C15  C   0  1  Y  N  N  -11.748  18.207  -23.036  -0.576   1.887   0.037  C16   8YD  19  
8YD  N17   N3   N   0  1  Y  N  N  -12.463  17.717  -24.104  -0.176   3.156   0.212  N17   8YD  20  
8YD  C18   C16  C   0  1  Y  N  N  -13.811  17.636  -24.086   1.097   3.439   0.351  C18   8YD  21  
8YD  N19   N4   N   0  1  Y  N  N  -14.470  18.024  -22.978   2.047   2.519   0.312  N19   8YD  22  
8YD  N21   N5   N   0  1  N  N  N  -14.633  18.753  -20.803   2.762   0.286   0.105  N21   8YD  23  
8YD  C23   C17  C   0  1  N  N  N  -15.264  17.629  -18.746   4.464  -0.939   1.370  C23   8YD  24  
8YD  N24   N6   N   0  1  N  N  N  -16.433  18.399  -18.620   5.314  -0.832   0.174  N24   8YD  25  
8YD  C25   C18  C   0  1  N  N  N  -17.298  18.234  -17.471   6.656  -0.900   0.270  C25   8YD  26  
8YD  C27   C19  C   0  1  N  N  N  -19.794  18.260  -17.411   8.984  -0.896  -0.583  C27   8YD  27  
8YD  O28   O1   O   0  1  N  N  N  -17.005  17.403  -16.642   7.179  -1.052   1.354  O28   8YD  28  
8YD  C29   C20  C   0  1  N  N  N  -16.714  19.362  -19.647   4.659  -0.647  -1.130  C29   8YD  29  
8YD  C30   C21  C   0  1  N  N  N  -16.060  19.066  -20.967   3.676   0.523  -1.020  C30   8YD  30  
8YD  C31   C22  C   0  1  Y  N  N  -12.410  18.573  -21.908   0.403   0.864  -0.007  C31   8YD  31  
8YD  C32   C23  C   0  1  Y  N  N  -11.661  19.087  -20.820   0.015  -0.469  -0.188  C32   8YD  32  
8YD  H101  H1   H   0  0  N  N  N   -4.238  19.368  -22.697  -7.443  -1.094  -0.858  H101  8YD  33  
8YD  H132  H2   H   0  0  N  N  N   -7.771  16.086  -21.005  -3.539   1.222  -3.108  H132  8YD  34  
8YD  H131  H3   H   0  0  N  N  N   -8.787  16.316  -22.468  -2.436  -0.123  -2.730  H131  8YD  35  
8YD  H133  H4   H   0  0  N  N  N   -7.127  15.648  -22.623  -3.857  -0.401  -3.765  H133  8YD  36  
8YD  H222  H5   H   0  0  N  N  N  -13.244  17.970  -19.376   4.043   1.171   1.516  H222  8YD  37  
8YD  H221  H6   H   0  0  N  N  N  -14.125  19.442  -18.842   2.780   0.121   2.200  H221  8YD  38  
8YD  H261  H7   H   0  0  N  Y  N  -18.524  19.702  -16.442   7.252  -1.591  -1.659  H261  8YD  39  
8YD  H262  H8   H   0  0  N  N  N  -18.566  19.823  -18.234   7.327   0.174  -1.447  H262  8YD  40  
8YD  H061  H9   H   0  0  N  N  N   -9.161  21.727  -22.250  -3.257  -0.301   2.549  H061  8YD  41  
8YD  H081  H10  H   0  0  N  N  N   -5.084  22.147  -22.742  -7.246  -1.307   2.014  H081  8YD  42  
8YD  H111  H11  H   0  0  N  N  N   -5.175  17.099  -22.406  -6.077  -0.544  -2.816  H111  8YD  43  
8YD  H181  H12  H   0  0  N  N  N  -14.351  17.266  -24.945   1.383   4.471   0.490  H181  8YD  44  
8YD  H232  H13  H   0  0  N  N  N  -15.462  16.749  -19.375   5.086  -0.909   2.264  H232  8YD  45  
8YD  H231  H14  H   0  0  N  N  N  -14.923  17.301  -17.753   3.906  -1.875   1.340  H231  8YD  46  
8YD  H271  H15  H   0  0  N  N  N  -20.688  18.897  -17.347   9.165  -1.858  -0.104  H271  8YD  47  
8YD  H273  H16  H   0  0  N  N  N  -19.819  17.687  -18.350   9.600  -0.815  -1.479  H273  8YD  48  
8YD  H272  H17  H   0  0  N  N  N  -19.777  17.566  -16.558   9.240  -0.093   0.107  H272  8YD  49  
8YD  H291  H18  H   0  0  N  N  N  -16.364  20.346  -19.302   5.410  -0.425  -1.889  H291  8YD  50  
8YD  H292  H19  H   0  0  N  N  N  -17.803  19.394  -19.801   4.122  -1.556  -1.402  H292  8YD  51  
8YD  H301  H20  H   0  0  N  N  N  -16.160  19.945  -21.621   3.102   0.604  -1.943  H301  8YD  52  
8YD  H302  H21  H   0  0  N  N  N  -16.564  18.205  -21.430   4.228   1.447  -0.852  H302  8YD  53  
8YD  H321  H22  H   0  0  N  N  N  -12.173  19.421  -19.930   0.761  -1.250  -0.220  H321  8YD  54  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
8YD  F15  C14   SING  N  N   1  
8YD  N17  C18   DOUB  Y  N   2  
8YD  N17  C16   SING  Y  N   3  
8YD  C18  N19   SING  Y  N   4  
8YD  C14  C16   DOUB  Y  N   5  
8YD  C14  C03   SING  Y  N   6  
8YD  C16  C31   SING  Y  N   7  
8YD  N19  C20   DOUB  Y  N   8  
8YD  N08  N07   SING  Y  N   9  
8YD  N08  C09   SING  Y  N  10  
8YD  C10  C09   DOUB  Y  N  11  
8YD  C10  C11   SING  Y  N  12  
8YD  N07  C06   DOUB  Y  N  13  
8YD  C09  C05   SING  Y  N  14  
8YD  C11  C12   DOUB  Y  N  15  
8YD  C06  C05   SING  Y  N  16  
8YD  C05  C04   DOUB  Y  N  17  
8YD  C12  C04   SING  Y  N  18  
8YD  C12  C13   SING  N  N  19  
8YD  C04  C03   SING  N  N  20  
8YD  C03  C02   DOUB  Y  N  21  
8YD  C20  C31   SING  Y  N  22  
8YD  C20  N21   SING  N  N  23  
8YD  C31  C32   DOUB  Y  N  24  
8YD  C30  N21   SING  N  N  25  
8YD  C30  C29   SING  N  N  26  
8YD  C02  C32   SING  Y  N  27  
8YD  C02  CL    SING  N  N  28  
8YD  N21  C22   SING  N  N  29  
8YD  C29  N24   SING  N  N  30  
8YD  C22  C23   SING  N  N  31  
8YD  C23  N24   SING  N  N  32  
8YD  N24  C25   SING  N  N  33  
8YD  C25  C26   SING  N  N  34  
8YD  C25  O28   DOUB  N  N  35  
8YD  C27  C26   SING  N  N  36  
8YD  C10  H101  SING  N  N  37  
8YD  C13  H132  SING  N  N  38  
8YD  C13  H131  SING  N  N  39  
8YD  C13  H133  SING  N  N  40  
8YD  C22  H222  SING  N  N  41  
8YD  C22  H221  SING  N  N  42  
8YD  C26  H261  SING  N  N  43  
8YD  C26  H262  SING  N  N  44  
8YD  C06  H061  SING  N  N  45  
8YD  N08  H081  SING  N  N  46  
8YD  C11  H111  SING  N  N  47  
8YD  C18  H181  SING  N  N  48  
8YD  C23  H232  SING  N  N  49  
8YD  C23  H231  SING  N  N  50  
8YD  C27  H271  SING  N  N  51  
8YD  C27  H273  SING  N  N  52  
8YD  C27  H272  SING  N  N  53  
8YD  C29  H291  SING  N  N  54  
8YD  C29  H292  SING  N  N  55  
8YD  C30  H301  SING  N  N  56  
8YD  C30  H302  SING  N  N  57  
8YD  C32  H321  SING  N  N  58  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
8YD  SMILES            ACDLabs               12.01  "c4c5c(c(c2c(Cl)cc3c(N1CCN(C(CC)=O)CC1)ncnc3c2F)c(C)c4)cnn5"  
8YD  InChI             InChI                 1.03   "InChI=1S/C23H22ClFN6O/c1-3-18(32)30-6-8-31(9-7-30)23-14-10-16(24)20(21(25)22(14)26-12-27-23)19-13(2)4-5-17-15(19)11-28-29-17/h4-5,10-12H,3,6-9H2,1-2H3,(H,28,29)"  
8YD  InChIKey          InChI                 1.03   BNGJOZTWYUJUMW-UHFFFAOYSA-N  
8YD  SMILES_CANONICAL  CACTVS                3.385  "CCC(=O)N1CCN(CC1)c2ncnc3c(F)c(c(Cl)cc23)c4c(C)ccc5[nH]ncc45"  
8YD  SMILES            CACTVS                3.385  "CCC(=O)N1CCN(CC1)c2ncnc3c(F)c(c(Cl)cc23)c4c(C)ccc5[nH]ncc45"  
8YD  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CCC(=O)N1CCN(CC1)c2c3cc(c(c(c3ncn2)F)c4c(ccc5c4cn[nH]5)C)Cl"  
8YD  SMILES            "OpenEye OEToolkits"  2.0.6  "CCC(=O)N1CCN(CC1)c2c3cc(c(c(c3ncn2)F)c4c(ccc5c4cn[nH]5)C)Cl"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
8YD  "SYSTEMATIC NAME"  ACDLabs               12.01  "1-{4-[6-chloro-8-fluoro-7-(5-methyl-1H-indazol-4-yl)quinazolin-4-yl]piperazin-1-yl}propan-1-one"  
8YD  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "1-[4-[6-chloranyl-8-fluoranyl-7-(5-methyl-1~{H}-indazol-4-yl)quinazolin-4-yl]piperazin-1-yl]propan-1-one"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
8YD  "Create component"  2017-03-20  RCSB  
8YD  "Modify synonyms"   2017-03-21  RCSB  
8YD  "Initial release"   2017-06-28  RCSB  
8YD  "Modify synonyms"   2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     8YD
_pdbx_chem_comp_synonyms.name        "KRAS(G12C) inhibitor, acrylamide form, bound form"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
