data_9JT
# 
_chem_comp.id                                    9JT 
_chem_comp.name                                  N-phenyl-2-selanylbenzamide 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H11 N O Se" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "~{N}-phenyl-2-selanyl-benzamide; Ebselen, bound form" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-05-26 
_chem_comp.pdbx_modified_date                    2023-03-30 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        276.193 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9JT 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5O40 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9JT C11 C1  C  0 1 Y N N 34.106 -1.646 18.132 -2.681 0.593  0.016  C11 9JT 1  
9JT C12 C2  C  0 1 Y N N 34.487 -0.659 19.065 -3.754 1.199  -0.626 C12 9JT 2  
9JT C13 C3  C  0 1 Y N N 35.824 -0.522 19.433 -5.004 0.613  -0.582 C13 9JT 3  
9JT C14 C4  C  0 1 Y N N 36.790 -1.357 18.880 -5.188 -0.575 0.100  C14 9JT 4  
9JT C15 C5  C  0 1 Y N N 36.426 -2.329 17.955 -4.122 -1.181 0.740  C15 9JT 5  
9JT O09 O1  O  0 1 N N N 31.653 -0.374 18.846 -0.416 -0.797 -0.117 O09 9JT 6  
9JT C08 C6  C  0 1 N N N 31.718 -1.228 17.986 -0.310 0.412  -0.043 C08 9JT 7  
9JT C07 C7  C  0 1 Y N N 30.496 -1.502 17.150 1.028  1.034  0.031  C07 9JT 8  
9JT C06 C8  C  0 1 Y N N 30.692 -1.704 15.764 1.152  2.421  0.123  C06 9JT 9  
9JT C05 C9  C  0 1 Y N N 29.624 -1.961 14.912 2.405  2.995  0.197  C05 9JT 10 
9JT C04 C10 C  0 1 Y N N 28.340 -2.002 15.439 3.536  2.199  0.179  C04 9JT 11 
9JT C03 C11 C  0 1 Y N N 28.139 -1.788 16.805 3.420  0.823  0.088  C03 9JT 12 
9JT C02 C12 C  0 1 Y N N 29.196 -1.524 17.680 2.174  0.236  0.014  C02 9JT 13 
9JT SE1 SE1 SE 0 0 N N N 28.846 -1.300 19.219 2.012  -1.713 -0.107 SE1 9JT 14 
9JT N10 N1  N  0 1 N N N 32.840 -1.896 17.687 -1.415 1.184  -0.026 N10 9JT 15 
9JT C16 C13 C  0 1 Y N N 35.097 -2.468 17.586 -2.871 -0.598 0.704  C16 9JT 16 
9JT H1  H1  H  0 1 N N N 33.741 -0.008 19.495 -3.611 2.128  -1.158 H1  9JT 17 
9JT H2  H2  H  0 1 N N N 36.111 0.234  20.149 -5.838 1.084  -1.080 H2  9JT 18 
9JT H3  H3  H  0 1 N N N 37.825 -1.250 19.170 -6.166 -1.031 0.133  H3  9JT 19 
9JT H4  H4  H  0 1 N N N 37.177 -2.975 17.525 -4.269 -2.109 1.273  H4  9JT 20 
9JT H5  H5  H  0 1 N N N 31.692 -1.658 15.359 0.270  3.044  0.135  H5  9JT 21 
9JT H6  H6  H  0 1 N N N 29.790 -2.126 13.858 2.502  4.068  0.268  H6  9JT 22 
9JT H7  H7  H  0 1 N N N 27.497 -2.199 14.793 4.514  2.653  0.237  H7  9JT 23 
9JT H8  H8  H  0 1 N N N 27.134 -1.828 17.198 4.307  0.207  0.075  H8  9JT 24 
9JT H9  H9  H  0 1 N N N 30.074 -1.039 19.965 2.029  -1.918 -1.653 H9  9JT 25 
9JT H10 H10 H  0 1 N N N 32.738 -2.671 17.063 -1.331 2.151  -0.044 H10 9JT 26 
9JT H11 H11 H  0 1 N N N 34.822 -3.224 16.865 -2.039 -1.072 1.203  H11 9JT 27 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9JT C05 C04 DOUB Y N 1  
9JT C05 C06 SING Y N 2  
9JT C04 C03 SING Y N 3  
9JT C06 C07 DOUB Y N 4  
9JT C03 C02 DOUB Y N 5  
9JT C07 C02 SING Y N 6  
9JT C07 C08 SING N N 7  
9JT C16 C15 DOUB Y N 8  
9JT C16 C11 SING Y N 9  
9JT C02 SE1 SING N N 10 
9JT N10 C08 SING N N 11 
9JT N10 C11 SING N N 12 
9JT C15 C14 SING Y N 13 
9JT C08 O09 DOUB N N 14 
9JT C11 C12 DOUB Y N 15 
9JT C14 C13 DOUB Y N 16 
9JT C12 C13 SING Y N 17 
9JT C12 H1  SING N N 18 
9JT C13 H2  SING N N 19 
9JT C14 H3  SING N N 20 
9JT C15 H4  SING N N 21 
9JT C06 H5  SING N N 22 
9JT C05 H6  SING N N 23 
9JT C04 H7  SING N N 24 
9JT C03 H8  SING N N 25 
9JT SE1 H9  SING N N 26 
9JT N10 H10 SING N N 27 
9JT C16 H11 SING N N 28 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9JT SMILES           ACDLabs              12.01 "O=C(Nc1ccccc1)c1ccccc1[SeH]"                                                          
9JT InChI            InChI                1.06  "InChI=1S/C13H11NOSe/c15-13(11-8-4-5-9-12(11)16)14-10-6-2-1-3-7-10/h1-9,16H,(H,14,15)" 
9JT InChIKey         InChI                1.06  PVPUYGNPKBMXGO-UHFFFAOYSA-N                                                            
9JT SMILES_CANONICAL CACTVS               3.385 "[SeH]c1ccccc1C(=O)Nc2ccccc2"                                                          
9JT SMILES           CACTVS               3.385 "[SeH]c1ccccc1C(=O)Nc2ccccc2"                                                          
9JT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)NC(=O)c2ccccc2[SeH]"                                                        
9JT SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)NC(=O)c2ccccc2[SeH]"                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9JT "SYSTEMATIC NAME" ACDLabs              12.01 N-phenyl-2-selanylbenzamide       
9JT "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-phenyl-2-selanyl-benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9JT "Create component" 2017-05-26 RCSB 
9JT "Initial release"  2018-06-13 RCSB 
9JT "Modify name"      2023-03-30 RCSB 
9JT "Modify synonyms"  2023-03-30 RCSB 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 9JT "~{N}-phenyl-2-selanyl-benzamide" PDB ? 
2 9JT "Ebselen, bound form"             PDB ? 
# 
